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52 Publikationen

2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934798
Pankoke, H., et al., 2019. F5Evaluation of commercially available DNA extraction kits for the analysis of the broiler chicken cecal microbiota. FEMS microbiology letters.
PUB | DOI | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935923
Nelkner, J., et al., 2019. Effect of Long-Term Farming Practices on Agricultural Soil Microbiome Members Represented by Metagenomically Assembled Genomes (MAGs) and Their Predicted Plant-Beneficial Genes. Genes, 10(6): 424.
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2933767
Fritz, A., et al., 2019. CAMISIM: simulating metagenomes and microbial communities. Microbiome, 7: 17.
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2018 | Bielefelder E-Dissertation | PUB-ID: 2918990
Rumming, M., 2018. Metadata-driven computational (meta)genomics. A practical machine learning approach, Bielefeld: Universität Bielefeld.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2916929
Stolze, Y., et al., 2018. Targeted in situ metatranscriptomics for selected taxa from mesophilic and thermophilic biogas plants. Microbial Biotechnology, 11(4), p 667-679.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920777
Celis, J.S., et al., 2018. Binning Enables Efficient Host Genome Reconstruction in Cnidarian Holobionts. GigaScience, 7(7): giy075.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920723
Meyer, F., et al., 2018. AMBER: Assessment of Metagenome BinnERs. GigaScience, : giy069.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2930593
Linden, M., et al., 2018. Common ELIXIR Service for Researcher Authentication and Authorisation. F1000Research, 7: 1199.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2915890
Huang, L., Krüger, J., & Sczyrba, A., 2018. Analyzing large scale genomic data on the cloud with Sparkhit. Bioinformatics, 34(9), p 1457-1465.
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2018 | Bielefelder Masterarbeit | PUB-ID: 2919932
Wiens, M., 2018. Concept, design and initial implementation of the de.NBI Cloud Portal, Bielefeld: Universität Bielefeld.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920750
Maus, I., et al., 2018. Characterization of Bathyarchaeota genomes assembled from metagenomes of biofilms residing in mesophilic and thermophilic biogas reactors. Biotechnology for Biofuels, 11: 167.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2918275
Fleming, E.J., et al., 2018. Insights into the fundamental physiology of the uncultured Fe-oxidizing bacterium Leptothrix ochracea. Applied and Environmental Microbiology, 84(9): e02239-17.
PUB | DOI | WoS | PubMed | Europe PMC
 
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2909153
Yu, J., et al., 2017. Rapid protein alignment in the cloud: HAMOND combines fast DIAMOND alignments with Hadoop parallelism. Journal of Biotechnology, 257, p 58-60.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2913556
Jünemann, S., et al., 2017. Bioinformatics for NGS-based metagenomics and the application to biogas research. Journal of Biotechnology, 261(SI), p 10-23.
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2017 | Datenpublikation | PUB-ID: 2914921
Huang, L., Krüger, J., & Sczyrba, A., 2017. Sparkhit evaluation data set. Bielefeld University. doi:10.4119/unibi/2914921
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2914367
Sczyrba, A., et al., 2017. Critical Assessment of Metagenome Interpretation—a benchmark of metagenomics software. Nature Methods, 14(11), p 1063-1071.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904815
Stolze, Y., et al., 2016. Identification and genome reconstruction of abundant distinct taxa in microbiomes from one thermophilic and three mesophilic production-scale biogas plants. Biotechnology for Biofuels, 9: 156.
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2016 | Bielefelder E-Dissertation | PUB-ID: 2906743
Bremges, A., 2016. Assembling the microbial dark matter, Bielefeld: Universität Bielefeld.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907633
Lux, M., et al., 2016. acdc – Automated Contamination Detection and Confidence estimation for single-cell genome data. BMC Bioinformatics, 17: 543.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904836
Heyer, R., et al., 2016. Proteotyping of biogas plant microbiomes separates biogas plants according to process temperature and reactor type. Biotechnology for Biofuels, 9(1): 155.
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