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154 Publikationen

2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2087955
Hackl, Matthias, Jakobi, Tobias, Blom, Jochen, Doppmeier, Daniel, Brinkrolf, Karina, Szczepanowski, Rafael, Bernhart, Stephan H, et al. 2011. “Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering”. Journal of Biotechnology 153 (1-2): 62-75.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2003418
Powney, Rachel, Smits, Theo H. M., Sawbridge, Tim, Frey, Beatrice, Blom, Jochen, Frey, Juerg E., Plummer, Kim M., et al. 2011. “Genome Sequence of an Erwinia amylovora Strain with Pathogenicity Restricted to Rubus Plants”. Journal of Bacteriology 193 (3): 785-786.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2093578
Linke, Burkhard, Giegerich, Robert, and Goesmann, Alexander. 2011. “Conveyor: a workflow engine for bioinformatic analyses”. Bioinformatics 27 (7): 903-911.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2093398
Brankatschk, Kerstin, Blom, Jochen, Goesmann, Alexander, Smits, Theo H. M., and Duffy, Brion. 2011. “Genome of a European Fresh-Vegetable Food Safety Outbreak Strain of Salmonella enterica subsp enterica Serovar Weltevreden”. Journal of Bacteriology 193 (8): 2066.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1929692
Schneider, Jessica, Vorhölter, Frank-Jörg, Trost, Eva, Blom, Jochen, Musa, Y. R., Neuweger, Heiko, Niehaus, Karsten, Schatschneider, Sarah, Tauch, Andreas, and Goesmann, Alexander. 2010. “CARMEN - Comparative Analysis and in silico Reconstruction of organism-specific MEtabolic Networks”. Genetics and Molecular Research 9 (3): 1660-1672.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1966439
Trost, Eva, Ott, Lisa, Schneider, Jessica, Schröder, Jasmin, Jaenicke, Sebastian, Goesmann, Alexander, Husemann, Peter, et al. 2010. “The complete genome sequence of Corynebacterium pseudotuberculosis FRC41 isolated from a 12-year-old girl with necrotizing lymphadenitis reveals insights into gene-regulatory networks contributing to virulence”. BMC Genomics 11 (1): 728.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1795508
Bertelli, Claire, Collyn, Francois, Croxatto, Antony, Rückert, Christian, Polkinghorne, Adam, Kebbi-Beghdadi, Carole, Goesmann, Alexander, Vaughan, Lloyd, and Greub, Gilbert. 2010. “The Waddlia Genome: A Window into Chlamydial Biology”. PLOS ONE 5 (5): e10890.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1795628
Smits, Theo H. M., Rezzonico, Fabio, Pelludat, Cosima, Goesmann, Alexander, Frey, Juerg E., and Duffy, Brion. 2010. “Genomic and phenotypic characterization of a nonpigmented variant of Pantoea vagans biocontrol strain C9-1 lacking the 530-kb megaplasmid pPag3”. FEMS MICROBIOLOGY LETTERS 308 (1): 48-54.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785275 OA
Trost, Eva, Götker, Susanne, Schneider, Jessica, Schneiker-Bekel, Susanne, Szczepanowski, Rafael, Tilker, Alexandra, Viehöver, Prisca, et al. 2010. “Complete genome sequence and lifestyle of black-pigmented Corynebacterium aurimucosum ATCC 700975 (formerly C. nigricans CN-1) isolated from a vaginal swab of a woman with spontaneous abortion”. BMC Genomics 11 (1): 91.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785504 OA
Yang, Ines, John, Uwe, Beszteri, Sára, Glöckner, Gernot, Krock, Bernd, Goesmann, Alexander, and Cembella, Allan D. 2010. “Comparative gene expression in toxic versus non-toxic strains of the marine dinoflagellate Alexandrium minutum”. BMC Genomics 11 (1): 248.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1796445
Smits, Theo H. M., Rezzonico, Fabio, Kamber, Tim, Blom, Jochen, Goesmann, Alexander, Frey, Juerg E., and Duffy, Brion. 2010. “Complete Genome Sequence of the Fire Blight Pathogen Erwinia amylovora CFBP 1430 and Comparison to Other Erwinia spp.”. MOLECULAR PLANT-MICROBE INTERACTIONS 23 (4): 384-393.
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2010 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 1894907
Mittard-Runte, Virginie, Bekel, Thomas, Blom, Jochen, Dondrup, Michael, Henckel, Kolja, Jaenicke, Sebastian, Krause, Lutz, et al. 2010. “Practical Guide: Genomic Techniques and How to Apply Them to Marine Questions”. In Introduction to Marine Genomics (Advances in Marine Genomics), ed. J. Mark Cock, Kristin Tessmar-Raible, Catherine Boyen, and Frédérique Viard, 1:315-396. Netherlands: Springer Netherlands.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1796644 OA
Smits, Theo H. M., Jaenicke, Sebastian, Rezzonico, Fabio, Kamber, Tim, Goesmann, Alexander, Frey, Jürg E, and Duffy, Brion. 2010. “Complete genome sequence of the fire blight pathogen Erwinia pyrifoliae DSM 12163(T) and comparative genomic insights into plant pathogenicity”. BMC Genomics 11 (1): 2.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785579 OA
Farnbacher, Max, Jahns, Thomas, Willrodt, Dirk, Daniel, Rolf, Haas, Rainer, Goesmann, Alexander, Kurtz, Stefan, and Rieder, Gabriele. 2010. “Sequencing, annotation, and comparative genome analysis of the gerbil-adapted Helicobacter pylori strain B8”. BMC Genomics 11 (1): 335.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1588692
Steinweg, Christiane, Kuenne, Carsten T., Billion, Andre, Mraheil, Mobarak A., Domann, Eugen, Ghai, Rohit, Barbuddhe, Sukhadeo B., et al. 2010. “Complete Genome Sequence of Listeria seeligeri, a Nonpathogenic Member of the Genus Listeria”. Journal of Bacteriology 192 (5): 1473-1474.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1794039
Kuenne, Carsten, Voget, Sonja, Pischimarov, Jordan, Oehm, Sebastian, Goesmann, Alexander, Daniel, Rolf, Hain, Torsten, and Chakraborty, Trinad. 2010. “Comparative Analysis of Plasmids in the Genus Listeria”. PLOS ONE 5 (9): e12511.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1894319 OA
Henckel, Kolja, Küster, Helge, Stutz, Leonhard, and Goesmann, Alexander. 2010. “MediPlEx - a tool to combine in silico and experimental gene expression profiles of the model legume Medicago truncatula.”. BMC Research Notes 3 (1): 262.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1968262
Smits, Theo H. M., Rezzonico, Fabio, Kamber, Tim, Goesmann, Alexander, Ishimaru, Carol A., Stockwell, Virginia O., Frey, Juerg E., and Duffy, Brion. 2010. “Genome Sequence of the Biocontrol Agent Pantoea vagans Strain C9-1”. Journal of Bacteriology 192 (24): 6486-6487.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1990186
Gehlenborg, Nils, O'Donoghue, Sean I, Baliga, Nitin S, Goesmann, Alexander, Hibbs, Matthew A, Kitano, Hiroaki, Kohlbacher, Oliver, et al. 2010. “Visualization of omics data for systems biology”. Nat Methods 7 (3s): S56-S68.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1930110
Joseph, Biju, Schneiker-Bekel, Susanne, Schramm-Glueck, Anja, Blom, Jochen, Claus, Heike, Linke, Burkhard, Schwarz, Roland F., et al. 2010. “Comparative Genome Biology of a Serogroup B Carriage and Disease Strain Supports a Polygenic Nature of Meningococcal Virulence”. JOURNAL OF BACTERIOLOGY 192 (20): 5363-5377.
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