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154 Publikationen

2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2526269
Strobel, T., et al., 2012. Complete genome sequence of Saccharothrix espanaensis DSM 44229T and comparison to the other completely sequenced Pseudonocardiaceae. BMC Genomics, 13(1), p 465.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2529610
Schork, S., et al., 2012. Genome Sequence of a Neisseria meningitidis Capsule Null Locus Strain from the Clonal Complex of Sequence Type 198. Journal of Bacteriology, 194(18), p 5144-5145.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2526281
Zischka, M., et al., 2012. Complete Genome Sequence of the Porcine Isolate Enterococcus faecalis D32. Journal of Bacteriology, 194(19), p 5490-5491.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2526298
Maus, I., et al., 2012. Complete Genome Sequence of the Hydrogenotrophic, Methanogenic Archaeon Methanoculleus bourgensis Strain MS2T, Isolated from a Sewage Sludge Digester. Journal of Bacteriology, 194(19), p 5487-5488.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2526933
Dohrmann, A.B., et al., 2012. Importance of rare taxa for bacterial diversity in the rhizosphere of Bt- and conventional maize varieties. The ISME journal, 7(1), p 37-49.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2517230
Jünemann, S., et al., 2012. Bacterial Community Shift in Treated Periodontitis Patients Revealed by Ion Torrent 16S rRNA Gene Amplicon Sequencing. PLoS ONE, 7(8), p e41606.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2500946
Mann, R.A., et al., 2012. Comparative analysis of the Hrp pathogenicity island of Rubus- and Spiraeoideae-infecting Erwinia amylovora strains identifies the IT region as a remnant of an integrative conjugative element. Gene, 504(1), p 6-12.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2490286
Vogel, U., et al., 2012. Ion Torrent PGM sequencing for genomic typing of Neisseria meningitidis for rapid determination of multiple layers of typing information. Journal of clinical microbiology, 50(6), p 1889-1894.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2300063
Albaum, S., et al., 2011. A guide through the computational analysis of isotope-labeled mass spectrometry-based quantitative proteomics data: an application study. Proteome Science, 9(1), p 30.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2451800
Toepel, J., et al., 2011. Construction and evaluation of a whole genome microarray of Chlamydomonas reinhardtii. BMC Genomics, 12(1), p 579-589.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2375634
Pothier, J.F., et al., 2011. The ubiquitous plasmid pXap41 in the invasive phytopathogen Xanthomonas arboricola pv. pruni: complete sequence and comparative genomic analysis. FEMS Microbiology Letters, 323(1), p 52-60.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2404767
Niu, B., et al., 2011. The Genome of the Plant Growth-Promoting Rhizobacterium Paenibacillus polymyxa M-1 Contains Nine Sites Dedicated to Nonribosomal Synthesis of Lipopeptides and Polyketides. Journal of Bacteriology, 193(20), p 5862-5863.
PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2354731
Wibberg, D., et al., 2011. Complete genome sequencing of Agrobacterium sp. H13-3, the former Rhizobium lupini H13-3, reveals a tripartite genome consisting of a circular and a linear chromosome and an accessory plasmid but lacking a tumor-inducing Ti-plasmid. Journal of Biotechnology, 155(1), p 50-62.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2317371
Küberl, A., et al., 2011. High-quality genome sequence of Pichia pastoris CBS7435. Journal of Biotechnology, 154(4), p 312-320.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2326511
Rückert, C., et al., 2011. Genome sequence of B. amyloliquefaciens type strain DSM7(T) reveals differences to plant-associated B. amyloliquefaciens FZB42. Journal of Biotechnology, 155(1), p 78-85.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2394493
Hinse, D., et al., 2011. Complete genome and comparative analysis of Streptococcus gallolyticus subsp gallolyticus, an emerging pathogen of infective endocarditis. BMC Genomics, 12(1), p 400.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2396576
Becker, J., et al., 2011. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Journal of Biotechnology, 156(3), p 227-235.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2289576
Thomas, V., et al., 2011. Lausannevirus, a giant amoebal virus encoding histone doublets. Environmental Microbiology, 13(6), p 1454-1466.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2375954
Borriss, R., et al., 2011. Relationship of Bacillus amyloliquefaciens clades associated with strains DSM 7T and FZB42T: a proposal for Bacillus amyloliquefaciens subsp. amyloliquefaciens subsp. nov. and Bacillus amyloliquefaciens subsp. plantarum subsp. nov. based on complete genome sequence comparisons. Int J Syst Evol Microbiol, 61(8), p 1786-1801.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2472468
Llop, P., et al., 2011. Erwinia amylovora novel plasmid pEI70: Complete sequence, biogeography, and role in aggressiveness in the fire blight phytopathogen. PLoS one, 6(12), p e28651.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2411830
Ausec, L., et al., 2011. Bioinformatic analysis reveals high diversity of bacterial genes for laccase-like enzymes. PLoS ONE, 6(10): e25724.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2326445
Schneider, J., et al., 2011. RAPYD - Rapid Annotation Platform for Yeast Data. Journal of Biotechnology, 155(1), p 118-126.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2307104
Smits, T.H.M., et al., 2011. Metabolic Versatility and Antibacterial Metabolite Biosynthesis Are Distinguishing Genomic Features of the Fire Blight Antagonist Pantoea vagans C9-1. PLoS ONE, 6(7), p e22247.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2447730
Gonzalez, J.M., et al., 2011. Genomics of the proteorhodopsin-containing marine flavobacterium Dokdonia sp. MED134. Applied and Environmental Microbiology, 77(24), p 8676-8686.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2448409
Imperi, F., et al., 2011. The genomics of Acinetobacter baumannii: Insights into genome plasticity, antimicrobial resistance and pathogenicity. IUBMB life, 63(12), p 1068-1074.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2326455
Krol, E., et al., 2011. RhizoRegNet-A database of rhizobial transcription factors and regulatory networks. Journal of Biotechnology, 155(1), p 127-134.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2326518
Szczepanowski, R., et al., 2011. Sequencing and comparative analysis of IncP-1 alpha antibiotic resistance plasmids reveal a highly conserved backbone and differences within accessory regions. Journal of Biotechnology, 155(1), p 95-103.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2453768
Becker, J., et al., 2011. Next-generation sequencing of the CHO cell transcriptome. BMC Proceedings, 5(Suppl. 8), p P6.
PUB | DOI
 
2011 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2397780
Doppmeier, D., et al., 2011. Using the GUS Reporter Gene for Quantitative Studies of Promotor Activity in A.thaliana Seedlings. Presented at the ICSB 2011 Heidelberg/Mannheim, Heidelberg/Mannheim, Germany.
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2011 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2382565
Borriss, R., et al., 2011. Whole Genome Sequence Comparisons in Taxonomy. In F. Rainey & A. Oren, eds. Taxonomy of Prokaryotes (Methods in Microbiology). Waltham, MA, USA: Academic Press,.
PUB | DOI | WoS
 
2011 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2447751
Jaenicke, S., et al., 2011. Analysis of the Metagenome from a Biogas-Producing Microbial Community by Means of Bioinformatics Methods. In F. J. de Bruijn, ed. Handbook of Molecular Microbial Ecology II: Metagenomics in Different Habitats. Wiley-Blackwell, pp. 403-414.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2290032
Joseph, B., et al., 2011. Virulence Evolution of the Human Pathogen Neisseria meningitidis by Recombination in the Core and Accessory Genome. PLoS ONE, 6(4), p e18441.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2093389
Schoen, C., et al., 2011. Whole-Genome Sequence of the Transformable Neisseria meningitidis Serogroup A Strain WUE2594. Journal of Bacteriology, 193(8), p 2064-2065.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2289887
Hinse, D., et al., 2011. Complete Genome Analysis of Streptococcus gallolyticus subsp gallolyticus, an Emerging Pathogen of Infective Endocarditis. Clinical Chemistry and Laboratory Medicine, 49, p S837.
PUB | WoS
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2289902
De Gregoris, T.B., et al., 2011. Deep sequencing of naupliar-, cyprid- and adult-specific normalised Expressed Sequence Tag (EST) libraries of the acorn barnacle Balanus amphitrite. Biofouling, 27(4), p 367-374.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2289952
Blom, J., et al., 2011. Exact and complete short-read alignment to microbial genomes using Graphics Processing Unit programming. Bioinformatics, 27(10), p 1351-1358.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2289928
Kant, R., et al., 2011. Comparative genomics of Lactobacillus. Microbial Biotechnology, 4(3), p 323-332.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Im Druck | PUB-ID: 2017892
Schneiker-Bekel, S., et al., In Press. The complete genome sequence of the dominant Sinorhizobium meliloti field isolate SM11 extends the S. meliloti pan-genome. Journal of Biotechnology, 155(1), p 20-33.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2003276
Jaenicke, S., et al., 2011. Comparative and Joint Analysis of Two Metagenomic Datasets from a Biogas Fermenter Obtained by 454-Pyrosequencing. PLoS ONE, 6(1), p e14519.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2036058
Margaret, I., et al., 2011. Symbiotic properties and first analyses of the genomic sequence of the fast growing model strain Sinorhizobium fredii HH103 nodulating soybean. Journal of Biotechnology, 155(1), p 11-19.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2087955
Hackl, M., et al., 2011. Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering. Journal of Biotechnology, 153(1-2), p 62-75.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2003418
Powney, R., et al., 2011. Genome Sequence of an Erwinia amylovora Strain with Pathogenicity Restricted to Rubus Plants. Journal of Bacteriology, 193(3), p 785-786.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2093578
Linke, B., Giegerich, R., & Goesmann, A., 2011. Conveyor: a workflow engine for bioinformatic analyses. Bioinformatics, 27(7), p 903-911.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2093398
Brankatschk, K., et al., 2011. Genome of a European Fresh-Vegetable Food Safety Outbreak Strain of Salmonella enterica subsp enterica Serovar Weltevreden. Journal of Bacteriology, 193(8), p 2066.
PUB | DOI | WoS | PubMed | Europe PMC
 
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1929692
Schneider, J., et al., 2010. CARMEN - Comparative Analysis and in silico Reconstruction of organism-specific MEtabolic Networks. Genetics and Molecular Research, 9(3), p 1660-1672.
PUB | DOI | WoS | PubMed | Europe PMC
 
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1966439
Trost, E., et al., 2010. The complete genome sequence of Corynebacterium pseudotuberculosis FRC41 isolated from a 12-year-old girl with necrotizing lymphadenitis reveals insights into gene-regulatory networks contributing to virulence. BMC Genomics, 11(1): 728.
PUB | DOI | WoS | PubMed | Europe PMC
 
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1795508
Bertelli, C., et al., 2010. The Waddlia Genome: A Window into Chlamydial Biology. PLOS ONE, 5(5), p e10890.
PUB | DOI | WoS | PubMed | Europe PMC
 
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1795628
Smits, T.H.M., et al., 2010. Genomic and phenotypic characterization of a nonpigmented variant of Pantoea vagans biocontrol strain C9-1 lacking the 530-kb megaplasmid pPag3. FEMS MICROBIOLOGY LETTERS, 308(1), p 48-54.
PUB | DOI | WoS | PubMed | Europe PMC
 
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785275
Trost, E., et al., 2010. Complete genome sequence and lifestyle of black-pigmented Corynebacterium aurimucosum ATCC 700975 (formerly C. nigricans CN-1) isolated from a vaginal swab of a woman with spontaneous abortion. BMC Genomics, 11(1): 91.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785504
Yang, I., et al., 2010. Comparative gene expression in toxic versus non-toxic strains of the marine dinoflagellate Alexandrium minutum. BMC Genomics, 11(1), p 248.
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