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154 Publikationen

2015 | Bielefelder E-Dissertation | PUB-ID: 2786037
Development of a read mapping analysis software and computational pan genome analysis of 20 Pseudomonas aeruginosa strains
Hilker, Rolf, Development of a read mapping analysis software and computational pan genome analysis of 20 Pseudomonas aeruginosa strains. (). Bielefeld, 2015
PUB | Dateien verfügbar
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2656773
Construction of a Public CHO Cell Line Transcript Database Using Versatile Bioinformatics Analysis Pipelines
Rupp, Oliver, Construction of a Public CHO Cell Line Transcript Database Using Versatile Bioinformatics Analysis Pipelines. PLoS ONE 9 (1). , 2014
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2643946
The genome of the recently domesticated crop plant sugar beet (Beta vulgaris)
Dohm, Juliane C, The genome of the recently domesticated crop plant sugar beet (Beta vulgaris). Nature 505 (7484). , 2014
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2651944
Genome Sequence of the Small-Colony Variant Pseudomonas aeruginosa MH27, Isolated from a Chronic Urethral Catheter Infection
Tielen, Petra, Genome Sequence of the Small-Colony Variant Pseudomonas aeruginosa MH27, Isolated from a Chronic Urethral Catheter Infection. Genome announcements 2 (1). , 2014
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2691732
Carbohydrate-active enzymes identified by metagenomic analysis of deep-sea sediment bacteria
Klippel, Barbara, Carbohydrate-active enzymes identified by metagenomic analysis of deep-sea sediment bacteria. Extremophiles 18 (5). , 2014
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2555342
Genome sequence of the plant growth promoting strain Bacillus amyloliquefaciens subsp. plantarum B9601-Y2 and expression of mersacidin and other secondary metabolites
He, Pengfei, Genome sequence of the plant growth promoting strain Bacillus amyloliquefaciens subsp. plantarum B9601-Y2 and expression of mersacidin and other secondary metabolites. Journal of biotechnology 164 (2). , 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2552500
The Pan-Genome of the Animal Pathogen Corynebacterium pseudotuberculosis Reveals Differences in Genome Plasticity between the Biovar ovis and equi Strains
Soares, S.C., The Pan-Genome of the Animal Pathogen Corynebacterium pseudotuberculosis Reveals Differences in Genome Plasticity between the Biovar ovis and equi Strains. PLoS ONE 8 (1). , 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2549908
Establishment and interpretation of the genome sequence of the phytopathogenic fungus Rhizoctonia solani AG1-IB isolate 7/3/14
Wibberg, Daniel, Establishment and interpretation of the genome sequence of the phytopathogenic fungus Rhizoctonia solani AG1-IB isolate 7/3/14. Journal of Biotechnology 167 (2). , 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2606943
Radically different phylogeographies and patterns of genetic variation in two European brown frogs, genus Rana
Vences, Miguel, Radically different phylogeographies and patterns of genetic variation in two European brown frogs, genus Rana. Molecular phylogenetics and evolution 68 (3). , 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2602756
Phylogenetic position and virulence apparatus of the pear flower necrosis pathogen Erwinia piriflorinigrans CFBP 5888(T) as assessed by comparative genomics
Smits, Theo H. M., Phylogenetic position and virulence apparatus of the pear flower necrosis pathogen Erwinia piriflorinigrans CFBP 5888(T) as assessed by comparative genomics. Systematic and applied microbiology 36 (7). , 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2641228
Corrigendum: Updating benchtop sequencing performance comparison
Jünemann, Sebastian, Corrigendum: Updating benchtop sequencing performance comparison. Nature biotechnology 31 (12). , 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2637220
The Rhizobacterium Bacillus amyloliquefaciens subsp. plantarum NAU-B3 Contains a Large Inversion within the Central Portion of the Genome
Wu, Huijun, The Rhizobacterium Bacillus amyloliquefaciens subsp. plantarum NAU-B3 Contains a Large Inversion within the Central Portion of the Genome. Genome announcements 1 (6). , 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2633427
Draft Genome Sequence of Sinorhizobium meliloti RU11/001, a model organism for flagellum structure, motility and chemotaxis
Wibberg, Daniel, Draft Genome Sequence of Sinorhizobium meliloti RU11/001, a model organism for flagellum structure, motility and chemotaxis. Journal of Biotechnology 168 (4). , 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2632946
Complete genome sequence of Pseudomonas sp. strain VLB120 a solvent tolerant, styrene degrading bacterium, isolated from forest soil
Köhler, Kirsten A. K., Complete genome sequence of Pseudomonas sp. strain VLB120 a solvent tolerant, styrene degrading bacterium, isolated from forest soil. Journal of Biotechnology 168 (4). , 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2622238
Complete sequence of Erwinia piriflorinigrans plasmids pEPIR37 and pEPIR5 and role of pEPIR37 in pathogen virulence
Barbe, S., Complete sequence of Erwinia piriflorinigrans plasmids pEPIR37 and pEPIR5 and role of pEPIR37 in pathogen virulence. Plant Pathology 62 (4). , 2013
PUB | DOI | WoS
 
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2615581
Chinese hamster genome sequenced from sorted chromosomes
Brinkrolf, Karina, Chinese hamster genome sequenced from sorted chromosomes. Nature Biotechnology 31 (8). , 2013
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2013 | Bielefelder E-Dissertation | PUB-ID: 2604883
Comparative genomics on gene and single nucleotide level
Blom, Jochen, Comparative genomics on gene and single nucleotide level. (). Bielefeld, 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2564601
Genomics and Physiology of a Marine Flavobacterium Encoding a Proteorhodopsin and a Xanthorhodopsin-Like Protein
Riedel, Thomas, Genomics and Physiology of a Marine Flavobacterium Encoding a Proteorhodopsin and a Xanthorhodopsin-Like Protein. PLOS ONE 8 (3). , 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2558460
Whole Genome Sequencing versus Traditional Genotyping for Investigation of a Mycobacterium tuberculosis Outbreak: A Longitudinal Molecular Epidemiological Study
Roetzer, Andreas, Whole Genome Sequencing versus Traditional Genotyping for Investigation of a Mycobacterium tuberculosis Outbreak: A Longitudinal Molecular Epidemiological Study. PLoS medicine 10 (2). , 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2560837
Complete Genome Sequence of the Probiotic Enterococcus faecalis Symbioflor 1 Clone DSM 16431
Fritzenwanker, Moritz, Complete Genome Sequence of the Probiotic Enterococcus faecalis Symbioflor 1 Clone DSM 16431. Genome Announcements 1 (1). , 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2576080
New insights into Chlamydomonas reinhardtii hydrogen production processes by combined microarray/RNA-seq transcriptomics
Toepel, Jörg, New insights into Chlamydomonas reinhardtii hydrogen production processes by combined microarray/RNA-seq transcriptomics. Plant Biotechnology Journal 11 (6). , 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2631956
Complete genome sequence of the kirromycin producer Streptomyces collinus Tü 365 consisting of a linear chromosome and two linear plasmids
Rückert, Christian, Complete genome sequence of the kirromycin producer Streptomyces collinus Tü 365 consisting of a linear chromosome and two linear plasmids. Journal of Biotechnology 168 (4). , 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2576539
The noncanonical type III secretion system of Xanthomonas translucens pv. graminis is essential for forage grass infection
Wichmann, Fabienne, The noncanonical type III secretion system of Xanthomonas translucens pv. graminis is essential for forage grass infection. Molecular plant pathology 14 (6). , 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2635526
Draft genome sequence of the cellulolytic Clostridium thermocellum wild-type strain BC1 playing a role in cellulosic biomass degradation
Koeck, Daniela E., Draft genome sequence of the cellulolytic Clostridium thermocellum wild-type strain BC1 playing a role in cellulosic biomass degradation. Journal of Biotechnology 168 (1). , 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2566922
Updating benchtop sequencing performance comparison
Jünemann, Sebastian, Updating benchtop sequencing performance comparison. Nature Biotechnology 31 (4). , 2013
PUB | DOI | WoS | PubMed | Europe PMC
 
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2557938
Comparative Genomics of 12 Strains of Erwinia amylovora Identifies a Pan-Genome with a Large Conserved Core
Mann, Rachel A, Comparative Genomics of 12 Strains of Erwinia amylovora Identifies a Pan-Genome with a Large Conserved Core. PLOS ONE 8 (2). , 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2561776
Proteome turnover in bacteria: current status for Corynebacterium glutamicum and related bacteria
Trötschel, Christian, Proteome turnover in bacteria: current status for Corynebacterium glutamicum and related bacteria. Microbial biotechnology (). , 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2554079
Reassessment of the Listeria monocytogenes pan-genome reveals dynamic integration hotspots and mobile genetic elements as major components of the accessory genome
Kuenne, Carsten, Reassessment of the Listeria monocytogenes pan-genome reveals dynamic integration hotspots and mobile genetic elements as major components of the accessory genome. BMC Genomics 14 (1). , 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2548286
Draft whole genome sequence of the cyanide-degrading bacterium Pseudomonas pseudoalcaligenes CECT5344
Luque-Almagro, Víctor M, Draft whole genome sequence of the cyanide-degrading bacterium Pseudomonas pseudoalcaligenes CECT5344. Environmental Microbiology 15 (1). , 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2645668
Reconstruction of the lipid metabolism for the microalga Monoraphidium neglectum from its genome sequence reveals characteristics suitable for biofuel production
Bogen, Christian, Reconstruction of the lipid metabolism for the microalga Monoraphidium neglectum from its genome sequence reveals characteristics suitable for biofuel production. BMC Genomics 14 (1). , 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2635520
Genome Analysis Coupled with Physiological Studies Reveals a Diverse Nitrogen Metabolism in Methylocystis sp Strain SC2
Dam, Bomba, Genome Analysis Coupled with Physiological Studies Reveals a Diverse Nitrogen Metabolism in Methylocystis sp Strain SC2. Plos One 8 (10). , 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2610129
MeltDB 2.0 - Advances of the metabolomics software system
Kessler, Nikolas, MeltDB 2.0 - Advances of the metabolomics software system. Bioinformatics 29 (19). , 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2607974
Polymyxin P is the active principle in suppressing phytopathogenic Erwinia spp. by the biocontrol rhizobacterium Paenibacillus polymyxa M-1
Niu, Ben, Polymyxin P is the active principle in suppressing phytopathogenic Erwinia spp. by the biocontrol rhizobacterium Paenibacillus polymyxa M-1. BMC microbiology 13 (1). , 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2529309
Changes in Root Bacterial Communities Associated to Two Different Development Stages of Canola (*Brassica napus* L. var oleifera) Evaluated through Next-Generation Sequencing
Bolzan de Campos, Samanta, Changes in Root Bacterial Communities Associated to Two Different Development Stages of Canola (*Brassica napus* L. var oleifera) Evaluated through Next-Generation Sequencing. Microbial Ecology 65 (3). , 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2529202
MetaSAMS - A novel software platform for taxonomic classification, functional annotation and comparative analysis of metagenome datasets
Zakrzewski, Martha, MetaSAMS - A novel software platform for taxonomic classification, functional annotation and comparative analysis of metagenome datasets. Journal of Biotechnology 167 (2). , 2013
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2013 | Konferenzbeitrag | Im Druck | PUB-ID: 2538625
Einsatz von Protein- und Metabolit-Profiling-Methoden zur Unterscheidung von ökologischem und konventionellem Weizen
Bonte, Anja, Einsatz von Protein- und Metabolit-Profiling-Methoden zur Unterscheidung von ökologischem und konventionellem Weizen. (). , 2013
PUB
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2498160
Complete genome sequence, lifestyle, and multi-drug resistance of the human pathogen Corynebacterium resistens DSM 45100 isolated from blood samples of a leukemia patient
Schröder, Jasmin, Complete genome sequence, lifestyle, and multi-drug resistance of the human pathogen Corynebacterium resistens DSM 45100 isolated from blood samples of a leukemia patient. BMC Genomics 13 (1). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2484618
Profiling of the metabolically active community from a production-scale biogas plant by means of high-throughput metatranscriptome sequencing
Zakrzewski, Martha, Profiling of the metabolically active community from a production-scale biogas plant by means of high-throughput metatranscriptome sequencing. Journal of Biotechnology 158 (4). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2513347
Pangenomic Study of Corynebacterium diphtheriae That Provides Insights into the Genomic Diversity of Pathogenic Isolates from Cases of Classical Diphtheria, Endocarditis, and Pneumonia
Trost, Eva, Pangenomic Study of Corynebacterium diphtheriae That Provides Insights into the Genomic Diversity of Pathogenic Isolates from Cases of Classical Diphtheria, Endocarditis, and Pneumonia. Journal of bacteriology 194 (12). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2500990
Root metabolic response of rice (Oryza sativa L.) genotypes with contrasting tolerance to zinc deficiency and bicarbonate excess
Rose, Michael T, Root metabolic response of rice (Oryza sativa L.) genotypes with contrasting tolerance to zinc deficiency and bicarbonate excess. Planta 236 (4). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2490949
Identification and Characterization of Microcin S, a New Antibacterial Peptide Produced by Probiotic Escherichia coli G3/10
Zschuttig, Anke, Identification and Characterization of Microcin S, a New Antibacterial Peptide Produced by Probiotic Escherichia coli G3/10. PLoS ONE 7 (3). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2527519
Evaluation of qPCR curve analysis methods for reliable biomarker discovery: Bias, resolution, precision, and implications
Ruijter, Jan M, Evaluation of qPCR curve analysis methods for reliable biomarker discovery: Bias, resolution, precision, and implications. Methods. A companion to methods in enzymology (San Diego, Calif.) 59 (1). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2530221
The genome sequence of the bacterium Streptomyces davawensis JCM 4913 and heterologous production of the unique antibiotic roseoflavin
Jankowitsch, Frank, The genome sequence of the bacterium Streptomyces davawensis JCM 4913 and heterologous production of the unique antibiotic roseoflavin. Journal of bacteriology 194 (24). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2471858
Correction: bioinformatic analysis reveals high diversity of bacterial genes for laccase-like enzymes
Ausec, Luka, Correction: bioinformatic analysis reveals high diversity of bacterial genes for laccase-like enzymes. PLoS ONE 7 (1). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2553455
The large universal Pantoea plasmid LPP-1 plays a major role in biological and ecological diversification
De Maayer, Pieter, The large universal Pantoea plasmid LPP-1 plays a major role in biological and ecological diversification. Bmc Genomics 13 (1). , 2012
PUB | DOI | WoS | PubMed | Europe PMC
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2490535
Insights into the completely annotated genome of Lactobacillus buchneri CD034, a strain isolated from stable grass silage
Heinl, Stefan, Insights into the completely annotated genome of Lactobacillus buchneri CD034, a strain isolated from stable grass silage. Journal of Biotechnology 161 (2). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2471681
Characterization of microbial biofilms in a thermophilic biogas system by high-throughput metagenome sequencing
Rademacher, Antje, Characterization of microbial biofilms in a thermophilic biogas system by high-throughput metagenome sequencing. FEMS Microbiology Ecology 79 (3). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2513256
Genome Sequence of Fibrella aestuarina BUZ 2T, a Filamentous Marine Bacterium
Filippini, Manuela, Genome Sequence of Fibrella aestuarina BUZ 2T, a Filamentous Marine Bacterium. Journal of bacteriology 194 (13). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2498232
Protein turnover quantification in a multi-labeling approach - from data calculation to evaluation
Trötschel, C, Protein turnover quantification in a multi-labeling approach - from data calculation to evaluation. Molecular & Cellular Proteomics 11 (8). , 2012
PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2487853
Comparative genomic analysis of Salmonella enterica subsp. enterica serovar Weltevreden foodborne strains with other serovars
Brankatschk, K, Comparative genomic analysis of Salmonella enterica subsp. enterica serovar Weltevreden foodborne strains with other serovars. International journal of food microbiology 155 (3). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2486204
The Complete Genome of Bacillus amyloliquefaciens subsp. plantarum CAU B946 Contains a Gene Cluster for Nonribosomal Synthesis of Iturin A
Blom, Jochen, The Complete Genome of Bacillus amyloliquefaciens subsp. plantarum CAU B946 Contains a Gene Cluster for Nonribosomal Synthesis of Iturin A. Journal of bacteriology 194 (7). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2478526
Computational identification of microRNA gene loci and precursor microRNA sequences in CHO cell lines
Hackl, Matthias, Computational identification of microRNA gene loci and precursor microRNA sequences in CHO cell lines. Journal of Biotechnology 158 (3). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2405255
MSEA: metabolite set enrichment analysis in the MeltDB metabolomics software platform: metabolic profiling of Corynebacterium glutamicum as an example
Persicke, Marcus, MSEA: metabolite set enrichment analysis in the MeltDB metabolomics software platform: metabolic profiling of Corynebacterium glutamicum as an example. Metabolomics 8 (2). , 2012
PUB | DOI | WoS
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2510984
UniMoG - A unifying framework for genomic distance calculation and sorting based on DCJ
Hilker, Rolf, UniMoG - A unifying framework for genomic distance calculation and sorting based on DCJ. Bioinformatics 28 (19). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2500959
Unique core genomes of the bacterial family vibrionaceae: Insights into niche adaptation and speciation
Kahlke, Tim, Unique core genomes of the bacterial family vibrionaceae: Insights into niche adaptation and speciation. BMC genomics 13 (1). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2500966
Comparative genomics and transcriptomics of lineages I, II, and III strains of Listeria monocytogenes
Hain, Torsten, Comparative genomics and transcriptomics of lineages I, II, and III strains of Listeria monocytogenes. BMC Genomics 13 (1). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2544774
Draft Genome Sequence of Wickerhamomyces ciferrii NRRL Y-1031 F-60-10
Schneider, Jessica, Draft Genome Sequence of Wickerhamomyces ciferrii NRRL Y-1031 F-60-10. Eukaryotic Cell 11 (12). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2500937
Lipopolysaccharide biosynthesis genes discriminate between Rubus- and Spiraeoideae-infective genotypes of Erwinia amylovora
Rezzonico, Fabio, Lipopolysaccharide biosynthesis genes discriminate between Rubus- and Spiraeoideae-infective genotypes of Erwinia amylovora. Molecular plant pathology 13 (8). , 2012
PUB | DOI | WoS | PubMed | Europe PMC
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2501081
Complete genome sequence of clinical isolate Pantoea ananatis LMG 5342
De Maayer, Pieter, Complete genome sequence of clinical isolate Pantoea ananatis LMG 5342. Journal of Bacteriology 194 (6). , 2012
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2542210
Sequence of Two Plasmids from Clostridium perfringens Chicken Necrotic Enteritis Isolates and Comparison with C. perfringens Conjugative Plasmids
Parreira, Valeria R., Sequence of Two Plasmids from Clostridium perfringens Chicken Necrotic Enteritis Isolates and Comparison with C. perfringens Conjugative Plasmids. PLoS ONE 7 (11). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2526269
Complete genome sequence of Saccharothrix espanaensis DSM 44229T and comparison to the other completely sequenced Pseudonocardiaceae
Strobel, Tina, Complete genome sequence of Saccharothrix espanaensis DSM 44229T and comparison to the other completely sequenced Pseudonocardiaceae. BMC Genomics 13 (1). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2529610
Genome Sequence of a Neisseria meningitidis Capsule Null Locus Strain from the Clonal Complex of Sequence Type 198
Schork, Sabine, Genome Sequence of a Neisseria meningitidis Capsule Null Locus Strain from the Clonal Complex of Sequence Type 198. Journal of Bacteriology 194 (18). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2526281
Complete Genome Sequence of the Porcine Isolate Enterococcus faecalis D32
Zischka, M., Complete Genome Sequence of the Porcine Isolate Enterococcus faecalis D32. Journal of Bacteriology 194 (19). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2526298
Complete Genome Sequence of the Hydrogenotrophic, Methanogenic Archaeon Methanoculleus bourgensis Strain MS2T, Isolated from a Sewage Sludge Digester
Maus, Irena, Complete Genome Sequence of the Hydrogenotrophic, Methanogenic Archaeon Methanoculleus bourgensis Strain MS2T, Isolated from a Sewage Sludge Digester. Journal of Bacteriology 194 (19). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2526933
Importance of rare taxa for bacterial diversity in the rhizosphere of Bt- and conventional maize varieties
Dohrmann, Anja B, Importance of rare taxa for bacterial diversity in the rhizosphere of Bt- and conventional maize varieties. The ISME journal 7 (1). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2517230
Bacterial Community Shift in Treated Periodontitis Patients Revealed by Ion Torrent 16S rRNA Gene Amplicon Sequencing
Jünemann, Sebastian, Bacterial Community Shift in Treated Periodontitis Patients Revealed by Ion Torrent 16S rRNA Gene Amplicon Sequencing. PLoS ONE 7 (8). , 2012
PUB | DOI | WoS | PubMed | Europe PMC
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2500946
Comparative analysis of the Hrp pathogenicity island of Rubus- and Spiraeoideae-infecting Erwinia amylovora strains identifies the IT region as a remnant of an integrative conjugative element
Mann, Rachel A, Comparative analysis of the Hrp pathogenicity island of Rubus- and Spiraeoideae-infecting Erwinia amylovora strains identifies the IT region as a remnant of an integrative conjugative element. Gene 504 (1). , 2012
PUB | DOI | WoS | PubMed | Europe PMC
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2490286
Ion Torrent PGM sequencing for genomic typing of Neisseria meningitidis for rapid determination of multiple layers of typing information
Vogel, Ulrich, Ion Torrent PGM sequencing for genomic typing of Neisseria meningitidis for rapid determination of multiple layers of typing information. Journal of clinical microbiology 50 (6). , 2012
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2300063
A guide through the computational analysis of isotope-labeled mass spectrometry-based quantitative proteomics data: an application study
Albaum, Stefan, A guide through the computational analysis of isotope-labeled mass spectrometry-based quantitative proteomics data: an application study. Proteome Science 9 (1). , 2011
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2451800
Construction and evaluation of a whole genome microarray of Chlamydomonas reinhardtii
Toepel, Jörg, Construction and evaluation of a whole genome microarray of Chlamydomonas reinhardtii. BMC Genomics 12 (1). , 2011
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2375634
The ubiquitous plasmid pXap41 in the invasive phytopathogen Xanthomonas arboricola pv. pruni: complete sequence and comparative genomic analysis
Pothier, Joël F., The ubiquitous plasmid pXap41 in the invasive phytopathogen Xanthomonas arboricola pv. pruni: complete sequence and comparative genomic analysis. FEMS Microbiology Letters 323 (1). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2404767
The Genome of the Plant Growth-Promoting Rhizobacterium Paenibacillus polymyxa M-1 Contains Nine Sites Dedicated to Nonribosomal Synthesis of Lipopeptides and Polyketides.
Niu, Ben, The Genome of the Plant Growth-Promoting Rhizobacterium Paenibacillus polymyxa M-1 Contains Nine Sites Dedicated to Nonribosomal Synthesis of Lipopeptides and Polyketides.. Journal of Bacteriology 193 (20). , 2011
PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2354731
Complete genome sequencing of Agrobacterium sp. H13-3, the former Rhizobium lupini H13-3, reveals a tripartite genome consisting of a circular and a linear chromosome and an accessory plasmid but lacking a tumor-inducing Ti-plasmid
Wibberg, Daniel, Complete genome sequencing of Agrobacterium sp. H13-3, the former Rhizobium lupini H13-3, reveals a tripartite genome consisting of a circular and a linear chromosome and an accessory plasmid but lacking a tumor-inducing Ti-plasmid. Journal of Biotechnology 155 (1). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2317371
High-quality genome sequence of Pichia pastoris CBS7435
Küberl, Andreas, High-quality genome sequence of Pichia pastoris CBS7435. Journal of Biotechnology 154 (4). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2326511
Genome sequence of B. amyloliquefaciens type strain DSM7(T) reveals differences to plant-associated B. amyloliquefaciens FZB42
Rückert, Christian, Genome sequence of B. amyloliquefaciens type strain DSM7(T) reveals differences to plant-associated B. amyloliquefaciens FZB42. Journal of Biotechnology 155 (1). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2394493
Complete genome and comparative analysis of Streptococcus gallolyticus subsp gallolyticus, an emerging pathogen of infective endocarditis
Hinse, Dennis, Complete genome and comparative analysis of Streptococcus gallolyticus subsp gallolyticus, an emerging pathogen of infective endocarditis. BMC Genomics 12 (1). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2396576
Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing
Becker, Jennifer, Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Journal of Biotechnology 156 (3). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2289576
Lausannevirus, a giant amoebal virus encoding histone doublets
Thomas, Vincent, Lausannevirus, a giant amoebal virus encoding histone doublets. Environmental Microbiology 13 (6). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2375954
Relationship of Bacillus amyloliquefaciens clades associated with strains DSM 7T and FZB42T: a proposal for Bacillus amyloliquefaciens subsp. amyloliquefaciens subsp. nov. and Bacillus amyloliquefaciens subsp. plantarum subsp. nov. based on complete genome sequence comparisons
Borriss, Rainer, Relationship of Bacillus amyloliquefaciens clades associated with strains DSM 7T and FZB42T: a proposal for Bacillus amyloliquefaciens subsp. amyloliquefaciens subsp. nov. and Bacillus amyloliquefaciens subsp. plantarum subsp. nov. based on complete genome sequence comparisons. Int J Syst Evol Microbiol 61 (8). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2472468
Erwinia amylovora novel plasmid pEI70: Complete sequence, biogeography, and role in aggressiveness in the fire blight phytopathogen
Llop, P., Erwinia amylovora novel plasmid pEI70: Complete sequence, biogeography, and role in aggressiveness in the fire blight phytopathogen. PLoS one 6 (12). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2411830
Bioinformatic analysis reveals high diversity of bacterial genes for laccase-like enzymes
Ausec, Luka, Bioinformatic analysis reveals high diversity of bacterial genes for laccase-like enzymes. PLoS ONE 6 (10). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2326445
RAPYD - Rapid Annotation Platform for Yeast Data
Schneider, Jessica, RAPYD - Rapid Annotation Platform for Yeast Data. Journal of Biotechnology 155 (1). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2307104
Metabolic Versatility and Antibacterial Metabolite Biosynthesis Are Distinguishing Genomic Features of the Fire Blight Antagonist Pantoea vagans C9-1
Smits, Theo H. M., Metabolic Versatility and Antibacterial Metabolite Biosynthesis Are Distinguishing Genomic Features of the Fire Blight Antagonist Pantoea vagans C9-1. PLoS ONE 6 (7). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2447730
Genomics of the proteorhodopsin-containing marine flavobacterium Dokdonia sp. MED134
Gonzalez, Jose M., Genomics of the proteorhodopsin-containing marine flavobacterium Dokdonia sp. MED134. Applied and Environmental Microbiology 77 (24). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2448409
The genomics of Acinetobacter baumannii: Insights into genome plasticity, antimicrobial resistance and pathogenicity
Imperi, F., The genomics of Acinetobacter baumannii: Insights into genome plasticity, antimicrobial resistance and pathogenicity. IUBMB life 63 (12). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2326455
RhizoRegNet-A database of rhizobial transcription factors and regulatory networks
Krol, Elizaveta, RhizoRegNet-A database of rhizobial transcription factors and regulatory networks. Journal of Biotechnology 155 (1). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2326518
Sequencing and comparative analysis of IncP-1 alpha antibiotic resistance plasmids reveal a highly conserved backbone and differences within accessory regions
Szczepanowski, Rafael, Sequencing and comparative analysis of IncP-1 alpha antibiotic resistance plasmids reveal a highly conserved backbone and differences within accessory regions. Journal of Biotechnology 155 (1). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2453768
Next-generation sequencing of the CHO cell transcriptome
Becker, Jennifer, Next-generation sequencing of the CHO cell transcriptome. 5 (Suppl. 8). , 2011
PUB | DOI
 
2011 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2397780
Using the GUS Reporter Gene for Quantitative Studies of Promotor Activity in A.thaliana Seedlings
Doppmeier, Daniel, Using the GUS Reporter Gene for Quantitative Studies of Promotor Activity in A.thaliana Seedlings. (). , 2011
PUB
 
2011 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2382565
Whole Genome Sequence Comparisons in Taxonomy
Borriss, R., Whole Genome Sequence Comparisons in Taxonomy. Taxonomy of Prokaryotes (Methods in Microbiology) (). Waltham, MA, USA, 2011
PUB | DOI | WoS
 
2011 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2447751
Analysis of the Metagenome from a Biogas-Producing Microbial Community by Means of Bioinformatics Methods
Jaenicke, Sebastian, Analysis of the Metagenome from a Biogas-Producing Microbial Community by Means of Bioinformatics Methods. Handbook of Molecular Microbial Ecology II: Metagenomics in Different Habitats (). , 2011
PUB | DOI
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2290032
Virulence Evolution of the Human Pathogen Neisseria meningitidis by Recombination in the Core and Accessory Genome
Joseph, Biju, Virulence Evolution of the Human Pathogen Neisseria meningitidis by Recombination in the Core and Accessory Genome. PLoS ONE 6 (4). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2093389
Whole-Genome Sequence of the Transformable Neisseria meningitidis Serogroup A Strain WUE2594
Schoen, Christoph, Whole-Genome Sequence of the Transformable Neisseria meningitidis Serogroup A Strain WUE2594. Journal of Bacteriology 193 (8). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2289887
Complete Genome Analysis of Streptococcus gallolyticus subsp gallolyticus, an Emerging Pathogen of Infective Endocarditis
Hinse, D., Complete Genome Analysis of Streptococcus gallolyticus subsp gallolyticus, an Emerging Pathogen of Infective Endocarditis. 49 (). , 2011
PUB | WoS
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2289902
Deep sequencing of naupliar-, cyprid- and adult-specific normalised Expressed Sequence Tag (EST) libraries of the acorn barnacle Balanus amphitrite
De Gregoris, Tristano Bacchetti, Deep sequencing of naupliar-, cyprid- and adult-specific normalised Expressed Sequence Tag (EST) libraries of the acorn barnacle Balanus amphitrite. Biofouling 27 (4). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2289952
Exact and complete short-read alignment to microbial genomes using Graphics Processing Unit programming
Blom, Jochen, Exact and complete short-read alignment to microbial genomes using Graphics Processing Unit programming. Bioinformatics 27 (10). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2289928
Comparative genomics of Lactobacillus
Kant, Ravi, Comparative genomics of Lactobacillus. Microbial Biotechnology 4 (3). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Im Druck | PUB-ID: 2017892
The complete genome sequence of the dominant Sinorhizobium meliloti field isolate SM11 extends the S. meliloti pan-genome
Schneiker-Bekel, Susanne, The complete genome sequence of the dominant Sinorhizobium meliloti field isolate SM11 extends the S. meliloti pan-genome. Journal of Biotechnology 155 (1). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2003276
Comparative and Joint Analysis of Two Metagenomic Datasets from a Biogas Fermenter Obtained by 454-Pyrosequencing
Jaenicke, Sebastian, Comparative and Joint Analysis of Two Metagenomic Datasets from a Biogas Fermenter Obtained by 454-Pyrosequencing. PLoS ONE 6 (1). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2087955
Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
Hackl, Matthias, Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering. Journal of Biotechnology 153 (1-2). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 

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