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154 Publikationen

2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2576080
J. Toepel, et al., “New insights into Chlamydomonas reinhardtii hydrogen production processes by combined microarray/RNA-seq transcriptomics”, Plant Biotechnology Journal, vol. 11, 2013, pp. 717-733.
PUB | DOI | WoS | PubMed | Europe PMC
 
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2631956
C. Rückert, et al., “Complete genome sequence of the kirromycin producer Streptomyces collinus Tü 365 consisting of a linear chromosome and two linear plasmids”, Journal of Biotechnology, vol. 168, 2013, pp. 739-740.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2576539
F. Wichmann, et al., “The noncanonical type III secretion system of Xanthomonas translucens pv. graminis is essential for forage grass infection”, Molecular plant pathology, vol. 14, 2013, pp. 576-588.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2635526
D.E. Koeck, et al., “Draft genome sequence of the cellulolytic Clostridium thermocellum wild-type strain BC1 playing a role in cellulosic biomass degradation”, Journal of Biotechnology, vol. 168, 2013, pp. 62-63.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2566922
S. Jünemann, et al., “Updating benchtop sequencing performance comparison”, Nature Biotechnology, vol. 31, 2013, pp. 294-296.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2557938
R.A. Mann, et al., “Comparative Genomics of 12 Strains of Erwinia amylovora Identifies a Pan-Genome with a Large Conserved Core”, PLOS ONE, vol. 8, 2013, pp. e55644.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2561776
C. Trötschel, S. Albaum, and A. Poetsch, “Proteome turnover in bacteria: current status for Corynebacterium glutamicum and related bacteria”, Microbial biotechnology, 2013, pp. 708-719.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2554079
C. Kuenne, et al., “Reassessment of the Listeria monocytogenes pan-genome reveals dynamic integration hotspots and mobile genetic elements as major components of the accessory genome”, BMC Genomics, vol. 14, 2013, pp. 47.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2548286
V.M. Luque-Almagro, et al., “Draft whole genome sequence of the cyanide-degrading bacterium Pseudomonas pseudoalcaligenes CECT5344”, Environmental Microbiology, vol. 15, 2013, pp. 253-270.
PUB | DOI | WoS | PubMed | Europe PMC
 
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2645668
C. Bogen, et al., “Reconstruction of the lipid metabolism for the microalga Monoraphidium neglectum from its genome sequence reveals characteristics suitable for biofuel production”, BMC Genomics, vol. 14, 2013, pp. 926.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2635520
B. Dam, et al., “Genome Analysis Coupled with Physiological Studies Reveals a Diverse Nitrogen Metabolism in Methylocystis sp Strain SC2”, Plos One, vol. 8, 2013, pp. e74767.
PUB | DOI | WoS | PubMed | Europe PMC
 
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2610129
N. Kessler, et al., “MeltDB 2.0 - Advances of the metabolomics software system”, Bioinformatics, vol. 29, 2013, pp. 2452-2459.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2607974
B. Niu, et al., “Polymyxin P is the active principle in suppressing phytopathogenic Erwinia spp. by the biocontrol rhizobacterium Paenibacillus polymyxa M-1”, BMC microbiology, vol. 13, 2013, pp. 137.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2529309
S. Bolzan de Campos, et al., “Changes in Root Bacterial Communities Associated to Two Different Development Stages of Canola (*Brassica napus* L. var oleifera) Evaluated through Next-Generation Sequencing”, Microbial Ecology, vol. 65, 2013, pp. 593-601.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2529202
M. Zakrzewski, et al., “MetaSAMS - A novel software platform for taxonomic classification, functional annotation and comparative analysis of metagenome datasets”, Journal of Biotechnology, vol. 167, 2013, pp. 156-165.
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2013 | Konferenzbeitrag | Im Druck | PUB-ID: 2538625
A. Bonte, et al., “Einsatz von Protein- und Metabolit-Profiling-Methoden zur Unterscheidung von ökologischem und konventionellem Weizen”, Presented at the 12. Wissenschaftstagung Ökologischer Landbau „Ideal und Wirklichkeit – Perspektiven Ökologischer Landbewirtschaftung“, Bonn, Germany, In Press.
PUB
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2498160
J. Schröder, et al., “Complete genome sequence, lifestyle, and multi-drug resistance of the human pathogen Corynebacterium resistens DSM 45100 isolated from blood samples of a leukemia patient”, BMC Genomics, vol. 13, 2012, : 141.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2484618
M. Zakrzewski, et al., “Profiling of the metabolically active community from a production-scale biogas plant by means of high-throughput metatranscriptome sequencing”, Journal of Biotechnology, vol. 158, 2012, pp. 248-258.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2513347
E. Trost, et al., “Pangenomic Study of Corynebacterium diphtheriae That Provides Insights into the Genomic Diversity of Pathogenic Isolates from Cases of Classical Diphtheria, Endocarditis, and Pneumonia”, Journal of bacteriology, vol. 194, 2012, pp. 3199-3215.
PUB | DOI | WoS | PubMed | Europe PMC
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2500990
M.T. Rose, et al., “Root metabolic response of rice (Oryza sativa L.) genotypes with contrasting tolerance to zinc deficiency and bicarbonate excess”, Planta, vol. 236, 2012, pp. 959-973.
PUB | DOI | WoS | PubMed | Europe PMC
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2490949
A. Zschuttig, et al., “Identification and Characterization of Microcin S, a New Antibacterial Peptide Produced by Probiotic Escherichia coli G3/10”, PLoS ONE, vol. 7, 2012, pp. e33351.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2530221
F. Jankowitsch, et al., “The genome sequence of the bacterium Streptomyces davawensis JCM 4913 and heterologous production of the unique antibiotic roseoflavin”, Journal of bacteriology, vol. 194, 2012, pp. 6818-6827.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2527519
J.M. Ruijter, et al., “Evaluation of qPCR curve analysis methods for reliable biomarker discovery: Bias, resolution, precision, and implications”, Methods. A companion to methods in enzymology (San Diego, Calif.), vol. 59, 2012, pp. 32-46.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2471858
L. Ausec, et al., “Correction: bioinformatic analysis reveals high diversity of bacterial genes for laccase-like enzymes”, PLoS ONE, vol. 7, 2012.
PUB | DOI | PubMed | Europe PMC
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2553455
P. De Maayer, et al., “The large universal Pantoea plasmid LPP-1 plays a major role in biological and ecological diversification”, Bmc Genomics, vol. 13, 2012, pp. 625.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2490535
S. Heinl, et al., “Insights into the completely annotated genome of Lactobacillus buchneri CD034, a strain isolated from stable grass silage”, Journal of Biotechnology, vol. 161, 2012, pp. 153-166.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2471681
A. Rademacher, et al., “Characterization of microbial biofilms in a thermophilic biogas system by high-throughput metagenome sequencing”, FEMS Microbiology Ecology, vol. 79, 2012, pp. 785-799.
PUB | DOI | WoS | PubMed | Europe PMC
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2513256
M. Filippini, et al., “Genome Sequence of Fibrella aestuarina BUZ 2T, a Filamentous Marine Bacterium”, Journal of bacteriology, vol. 194, 2012, pp. 3555.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2498232
C. Trötschel, et al., “Protein turnover quantification in a multi-labeling approach - from data calculation to evaluation”, Molecular & Cellular Proteomics, vol. 11, 2012, pp. 512-526.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2487853
K. Brankatschk, et al., “Comparative genomic analysis of Salmonella enterica subsp. enterica serovar Weltevreden foodborne strains with other serovars”, International journal of food microbiology, vol. 155, 2012, pp. 247-256.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2486204
J. Blom, et al., “The Complete Genome of Bacillus amyloliquefaciens subsp. plantarum CAU B946 Contains a Gene Cluster for Nonribosomal Synthesis of Iturin A”, Journal of bacteriology, vol. 194, 2012, pp. 1845-1846.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2478526
M. Hackl, et al., “Computational identification of microRNA gene loci and precursor microRNA sequences in CHO cell lines”, Journal of Biotechnology, vol. 158, 2012, pp. 151-155.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2405255
M. Persicke, et al., “MSEA: metabolite set enrichment analysis in the MeltDB metabolomics software platform: metabolic profiling of Corynebacterium glutamicum as an example”, Metabolomics, vol. 8, 2012, pp. 310-322.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2510984
R. Hilker, et al., “UniMoG - A unifying framework for genomic distance calculation and sorting based on DCJ”, Bioinformatics, vol. 28, 2012, pp. 2509-2511.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2500959
T. Kahlke, et al., “Unique core genomes of the bacterial family vibrionaceae: Insights into niche adaptation and speciation”, BMC genomics, vol. 13, 2012, pp. 179.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2500966
T. Hain, et al., “Comparative genomics and transcriptomics of lineages I, II, and III strains of Listeria monocytogenes”, BMC Genomics, vol. 13, 2012, pp. 144.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2544774
J. Schneider, et al., “Draft Genome Sequence of Wickerhamomyces ciferrii NRRL Y-1031 F-60-10”, Eukaryotic Cell, vol. 11, 2012, pp. 1582-1583.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2542210
V.R. Parreira, et al., “Sequence of Two Plasmids from Clostridium perfringens Chicken Necrotic Enteritis Isolates and Comparison with C. perfringens Conjugative Plasmids”, PLoS ONE, vol. 7, 2012, pp. e49753.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2500937
F. Rezzonico, et al., “Lipopolysaccharide biosynthesis genes discriminate between Rubus- and Spiraeoideae-infective genotypes of Erwinia amylovora”, Molecular plant pathology, vol. 13, 2012, pp. 975-984.
PUB | DOI | WoS | PubMed | Europe PMC
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2501081
P. De Maayer, et al., “Complete genome sequence of clinical isolate Pantoea ananatis LMG 5342”, Journal of Bacteriology, vol. 194, 2012, pp. 1615-1616.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2526269
T. Strobel, et al., “Complete genome sequence of Saccharothrix espanaensis DSM 44229T and comparison to the other completely sequenced Pseudonocardiaceae”, BMC Genomics, vol. 13, 2012, pp. 465.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2529610
S. Schork, et al., “Genome Sequence of a Neisseria meningitidis Capsule Null Locus Strain from the Clonal Complex of Sequence Type 198”, Journal of Bacteriology, vol. 194, 2012, pp. 5144-5145.
PUB | DOI | WoS | PubMed | Europe PMC
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2526281
M. Zischka, et al., “Complete Genome Sequence of the Porcine Isolate Enterococcus faecalis D32”, Journal of Bacteriology, vol. 194, 2012, pp. 5490-5491.
PUB | DOI | WoS | PubMed | Europe PMC
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2526298
I. Maus, et al., “Complete Genome Sequence of the Hydrogenotrophic, Methanogenic Archaeon Methanoculleus bourgensis Strain MS2T, Isolated from a Sewage Sludge Digester”, Journal of Bacteriology, vol. 194, 2012, pp. 5487-5488.
PUB | DOI | WoS | PubMed | Europe PMC
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2526933
A.B. Dohrmann, et al., “Importance of rare taxa for bacterial diversity in the rhizosphere of Bt- and conventional maize varieties”, The ISME journal, vol. 7, 2012, pp. 37-49.
PUB | DOI | WoS | PubMed | Europe PMC
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2517230
S. Jünemann, et al., “Bacterial Community Shift in Treated Periodontitis Patients Revealed by Ion Torrent 16S rRNA Gene Amplicon Sequencing”, PLoS ONE, vol. 7, 2012, pp. e41606.
PUB | DOI | WoS | PubMed | Europe PMC
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2500946
R.A. Mann, et al., “Comparative analysis of the Hrp pathogenicity island of Rubus- and Spiraeoideae-infecting Erwinia amylovora strains identifies the IT region as a remnant of an integrative conjugative element”, Gene, vol. 504, 2012, pp. 6-12.
PUB | DOI | WoS | PubMed | Europe PMC
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2490286
U. Vogel, et al., “Ion Torrent PGM sequencing for genomic typing of Neisseria meningitidis for rapid determination of multiple layers of typing information”, Journal of clinical microbiology, vol. 50, 2012, pp. 1889-1894.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2300063
S. Albaum, et al., “A guide through the computational analysis of isotope-labeled mass spectrometry-based quantitative proteomics data: an application study”, Proteome Science, vol. 9, 2011, pp. 30.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2451800
J. Toepel, et al., “Construction and evaluation of a whole genome microarray of Chlamydomonas reinhardtii”, BMC Genomics, vol. 12, 2011, pp. 579-589.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2375634
J.F. Pothier, et al., “The ubiquitous plasmid pXap41 in the invasive phytopathogen Xanthomonas arboricola pv. pruni: complete sequence and comparative genomic analysis”, FEMS Microbiology Letters, vol. 323, 2011, pp. 52-60.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2404767
B. Niu, et al., “The Genome of the Plant Growth-Promoting Rhizobacterium Paenibacillus polymyxa M-1 Contains Nine Sites Dedicated to Nonribosomal Synthesis of Lipopeptides and Polyketides.”, Journal of Bacteriology, vol. 193, 2011, pp. 5862-5863.
PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2354731
D. Wibberg, et al., “Complete genome sequencing of Agrobacterium sp. H13-3, the former Rhizobium lupini H13-3, reveals a tripartite genome consisting of a circular and a linear chromosome and an accessory plasmid but lacking a tumor-inducing Ti-plasmid”, Journal of Biotechnology, vol. 155, 2011, pp. 50-62.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2317371
A. Küberl, et al., “High-quality genome sequence of Pichia pastoris CBS7435”, Journal of Biotechnology, vol. 154, 2011, pp. 312-320.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2326511
C. Rückert, et al., “Genome sequence of B. amyloliquefaciens type strain DSM7(T) reveals differences to plant-associated B. amyloliquefaciens FZB42”, Journal of Biotechnology, vol. 155, 2011, pp. 78-85.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2394493
D. Hinse, et al., “Complete genome and comparative analysis of Streptococcus gallolyticus subsp gallolyticus, an emerging pathogen of infective endocarditis”, BMC Genomics, vol. 12, 2011, pp. 400.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2396576
J. Becker, et al., “Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing”, Journal of Biotechnology, vol. 156, 2011, pp. 227-235.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2289576
V. Thomas, et al., “Lausannevirus, a giant amoebal virus encoding histone doublets”, Environmental Microbiology, vol. 13, 2011, pp. 1454-1466.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2375954
R. Borriss, et al., “Relationship of Bacillus amyloliquefaciens clades associated with strains DSM 7T and FZB42T: a proposal for Bacillus amyloliquefaciens subsp. amyloliquefaciens subsp. nov. and Bacillus amyloliquefaciens subsp. plantarum subsp. nov. based on complete genome sequence comparisons”, Int J Syst Evol Microbiol, vol. 61, 2011, pp. 1786-1801.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2472468
P. Llop, et al., “Erwinia amylovora novel plasmid pEI70: Complete sequence, biogeography, and role in aggressiveness in the fire blight phytopathogen”, PLoS one, vol. 6, 2011, pp. e28651.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2411830
L. Ausec, et al., “Bioinformatic analysis reveals high diversity of bacterial genes for laccase-like enzymes”, PLoS ONE, vol. 6, 2011, : e25724.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2326445
J. Schneider, et al., “RAPYD - Rapid Annotation Platform for Yeast Data”, Journal of Biotechnology, vol. 155, 2011, pp. 118-126.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2307104
T.H.M. Smits, et al., “Metabolic Versatility and Antibacterial Metabolite Biosynthesis Are Distinguishing Genomic Features of the Fire Blight Antagonist Pantoea vagans C9-1”, PLoS ONE, vol. 6, 2011, pp. e22247.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2447730
J.M. Gonzalez, et al., “Genomics of the proteorhodopsin-containing marine flavobacterium Dokdonia sp. MED134”, Applied and Environmental Microbiology, vol. 77, 2011, pp. 8676-8686.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2448409
F. Imperi, et al., “The genomics of Acinetobacter baumannii: Insights into genome plasticity, antimicrobial resistance and pathogenicity”, IUBMB life, vol. 63, 2011, pp. 1068-1074.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2326455
E. Krol, et al., “RhizoRegNet-A database of rhizobial transcription factors and regulatory networks”, Journal of Biotechnology, vol. 155, 2011, pp. 127-134.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2326518
R. Szczepanowski, et al., “Sequencing and comparative analysis of IncP-1 alpha antibiotic resistance plasmids reveal a highly conserved backbone and differences within accessory regions”, Journal of Biotechnology, vol. 155, 2011, pp. 95-103.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2453768
J. Becker, et al., “Next-generation sequencing of the CHO cell transcriptome”, BMC Proceedings, vol. 5, 2011, pp. P6.
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2011 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2397780
D. Doppmeier, et al., “Using the GUS Reporter Gene for Quantitative Studies of Promotor Activity in A.thaliana Seedlings”, Presented at the ICSB 2011 Heidelberg/Mannheim, Heidelberg/Mannheim, Germany, 2011.
PUB
 
2011 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2382565
R. Borriss, et al., “Whole Genome Sequence Comparisons in Taxonomy”, Taxonomy of Prokaryotes (Methods in Microbiology), F. Rainey and A. Oren, eds., Waltham, MA, USA: Academic Press, 2011.
PUB | DOI | WoS
 
2011 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2447751
S. Jaenicke, et al., “Analysis of the Metagenome from a Biogas-Producing Microbial Community by Means of Bioinformatics Methods”, Handbook of Molecular Microbial Ecology II: Metagenomics in Different Habitats, F.J. de Bruijn, ed., Wiley-Blackwell, 2011, pp.403-414.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2290032
B. Joseph, et al., “Virulence Evolution of the Human Pathogen Neisseria meningitidis by Recombination in the Core and Accessory Genome”, PLoS ONE, vol. 6, 2011, pp. e18441.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2093389
C. Schoen, et al., “Whole-Genome Sequence of the Transformable Neisseria meningitidis Serogroup A Strain WUE2594”, Journal of Bacteriology, vol. 193, 2011, pp. 2064-2065.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2289887
D. Hinse, et al., “Complete Genome Analysis of Streptococcus gallolyticus subsp gallolyticus, an Emerging Pathogen of Infective Endocarditis”, Clinical Chemistry and Laboratory Medicine, vol. 49, 2011, pp. S837.
PUB | WoS
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2289902
T.B. De Gregoris, et al., “Deep sequencing of naupliar-, cyprid- and adult-specific normalised Expressed Sequence Tag (EST) libraries of the acorn barnacle Balanus amphitrite”, Biofouling, vol. 27, 2011, pp. 367-374.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2289952
J. Blom, et al., “Exact and complete short-read alignment to microbial genomes using Graphics Processing Unit programming”, Bioinformatics, vol. 27, 2011, pp. 1351-1358.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2289928
R. Kant, et al., “Comparative genomics of Lactobacillus”, Microbial Biotechnology, vol. 4, 2011, pp. 323-332.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Im Druck | PUB-ID: 2017892
S. Schneiker-Bekel, et al., “The complete genome sequence of the dominant Sinorhizobium meliloti field isolate SM11 extends the S. meliloti pan-genome”, Journal of Biotechnology, vol. 155, In Press, pp. 20-33.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2003276
S. Jaenicke, et al., “Comparative and Joint Analysis of Two Metagenomic Datasets from a Biogas Fermenter Obtained by 454-Pyrosequencing”, PLoS ONE, vol. 6, 2011, pp. e14519.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2036058
I. Margaret, et al., “Symbiotic properties and first analyses of the genomic sequence of the fast growing model strain Sinorhizobium fredii HH103 nodulating soybean”, Journal of Biotechnology, vol. 155, 2011, pp. 11-19.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2087955
M. Hackl, et al., “Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering”, Journal of Biotechnology, vol. 153, 2011, pp. 62-75.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2003418
R. Powney, et al., “Genome Sequence of an Erwinia amylovora Strain with Pathogenicity Restricted to Rubus Plants”, Journal of Bacteriology, vol. 193, 2011, pp. 785-786.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2093578
B. Linke, R. Giegerich, and A. Goesmann, “Conveyor: a workflow engine for bioinformatic analyses”, Bioinformatics, vol. 27, 2011, pp. 903-911.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2093398
K. Brankatschk, et al., “Genome of a European Fresh-Vegetable Food Safety Outbreak Strain of Salmonella enterica subsp enterica Serovar Weltevreden”, Journal of Bacteriology, vol. 193, 2011, pp. 2066.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1929692
J. Schneider, et al., “CARMEN - Comparative Analysis and in silico Reconstruction of organism-specific MEtabolic Networks”, Genetics and Molecular Research, vol. 9, 2010, pp. 1660-1672.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1966439
E. Trost, et al., “The complete genome sequence of Corynebacterium pseudotuberculosis FRC41 isolated from a 12-year-old girl with necrotizing lymphadenitis reveals insights into gene-regulatory networks contributing to virulence”, BMC Genomics, vol. 11, 2010, : 728.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1795508
C. Bertelli, et al., “The Waddlia Genome: A Window into Chlamydial Biology”, PLOS ONE, vol. 5, 2010, pp. e10890.
PUB | DOI | WoS | PubMed | Europe PMC
 
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1795628
T.H.M. Smits, et al., “Genomic and phenotypic characterization of a nonpigmented variant of Pantoea vagans biocontrol strain C9-1 lacking the 530-kb megaplasmid pPag3”, FEMS MICROBIOLOGY LETTERS, vol. 308, 2010, pp. 48-54.
PUB | DOI | WoS | PubMed | Europe PMC
 
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785275
E. Trost, et al., “Complete genome sequence and lifestyle of black-pigmented Corynebacterium aurimucosum ATCC 700975 (formerly C. nigricans CN-1) isolated from a vaginal swab of a woman with spontaneous abortion”, BMC Genomics, vol. 11, 2010, : 91.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785504
I. Yang, et al., “Comparative gene expression in toxic versus non-toxic strains of the marine dinoflagellate Alexandrium minutum”, BMC Genomics, vol. 11, 2010, pp. 248.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1796445
T.H.M. Smits, et al., “Complete Genome Sequence of the Fire Blight Pathogen Erwinia amylovora CFBP 1430 and Comparison to Other Erwinia spp.”, MOLECULAR PLANT-MICROBE INTERACTIONS, vol. 23, 2010, pp. 384-393.
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2010 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 1894907
V. Mittard-Runte, et al., “Practical Guide: Genomic Techniques and How to Apply Them to Marine Questions”, Introduction to Marine Genomics (Advances in Marine Genomics), J.M. Cock, et al., eds., vol. 1, Netherlands: Springer Netherlands, 2010, pp.315-396.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1796644
T.H.M. Smits, et al., “Complete genome sequence of the fire blight pathogen Erwinia pyrifoliae DSM 12163(T) and comparative genomic insights into plant pathogenicity”, BMC Genomics, vol. 11, 2010, pp. 2.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785579
M. Farnbacher, et al., “Sequencing, annotation, and comparative genome analysis of the gerbil-adapted Helicobacter pylori strain B8”, BMC Genomics, vol. 11, 2010, pp. 335.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1588692
C. Steinweg, et al., “Complete Genome Sequence of Listeria seeligeri, a Nonpathogenic Member of the Genus Listeria”, Journal of Bacteriology, vol. 192, 2010, pp. 1473-1474.
PUB | DOI | WoS | PubMed | Europe PMC
 
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1794039
C. Kuenne, et al., “Comparative Analysis of Plasmids in the Genus Listeria”, PLOS ONE, vol. 5, 2010, pp. e12511.
PUB | DOI | WoS | PubMed | Europe PMC
 
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1894319
K. Henckel, et al., “MediPlEx - a tool to combine in silico and experimental gene expression profiles of the model legume Medicago truncatula.”, BMC Research Notes, vol. 3, 2010, pp. 262.
PUB | PDF | DOI | PubMed | Europe PMC
 
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1968262
T.H.M. Smits, et al., “Genome Sequence of the Biocontrol Agent Pantoea vagans Strain C9-1”, Journal of Bacteriology, vol. 192, 2010, pp. 6486-6487.
PUB | DOI | WoS | PubMed | Europe PMC
 
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1990186
N. Gehlenborg, et al., “Visualization of omics data for systems biology”, Nat Methods, vol. 7, 2010, pp. S56-S68.
PUB | DOI | WoS | PubMed | Europe PMC
 
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1930110
B. Joseph, et al., “Comparative Genome Biology of a Serogroup B Carriage and Disease Strain Supports a Polygenic Nature of Meningococcal Virulence”, JOURNAL OF BACTERIOLOGY, vol. 192, 2010, pp. 5363-5377.
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