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264 Publikationen

2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907915
Taniguchi, H., Henke, N.A., Heider, S., Wendisch, V.F.: Overexpression of the primary sigma factor gene sigA improved carotenoid production by Corynebacterium glutamicum: application to production of beta-carotene and the non-native linear C50 carotenoid bisanhydrobacterioruberin. Metabolic Engineering Communications. 4, 1-11 (2017).
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2909045
Henke, N.A., Heider, S., Hannibal, S., Wendisch, V.F., Peters-Wendisch, P.: Isoprenoid pyrophosphate-dependent transcriptional regulation of carotenogenesis in Corynebacterium glutamicum. Frontiers in Microbiology. 8, : 633 (2017).
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2017 | Sammelwerksbeitrag | PUB-ID: 2908205
Henke, N.A., Peters-Wendisch, P., Wendisch, V.F.: Carotenoid production by Corynebacterium: the workhorse of industrial amino acid production as host for production of a broad spectrum of C40 and C50 carotenoids. In: Cvetković, D. (ed.) Carotenoids. 1st ed. p. 159-173. IN TECH d.o.o., Rijeka, Croatia (2017).
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2910571
Jorge, J., Perez, F., Wendisch, V.F.: A new metabolic route for the fermentative production of 5-aminovalerate from glucose and alternative carbon sources. Bioresource Technology. 245, 1701–1709 (2017).
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2910629
Perez, F., Ziert, C., Risse, J.M., Wendisch, V.F.: Improved fermentative production of the compatible solute ectoine by Corynebacterium glutamicum from glucose and alternative carbon sources. J Biotechnol. 258, 59-68 (2017).
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2906474
Jorge, J., Nguyen, A.Q., Perez, F., Kind, S., Wendisch, V.F.: Improved fermentative production of gamma-aminobutyric acid via the putrescine route: systems metabolic engineering for production from glucose, amino sugars and xylose. Biotechnology and Bioengineering. 114, 862-873 (2017).
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2908307
Perez, F., Risse, J.M., Friehs, K., Wendisch, V.F.: Fermentative production of L-pipecolic acid from glucose and alternative carbon sources. Biotechnology Journal. 12, : 1600646 (2017).
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2906606
Fernandes de Brito, L., Irla, M., Walter, T., Wendisch, V.F.: Magnesium-aminoclay-based transformation of Paenibacillus riograndensis and Paenibacillus polymyxa and development of tools for gene expression. Applied Microbiology and Biotechnology. 101, 735-747 (2017).
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911022
Corinti, D., Coletti, C., Re, N., Piccirillo, S., Giampa, M., Crestoni, M.E., Fornarini, S.: Hydrolysis of cis-and transplatin: structure and reactivity of the aqua complexes in a solvent free environment. RSC ADVANCES. 7, 15877-15884 (2017).
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907021
Irla, M., Naerdal, I., Brautaset, T., Wendisch, V.F.: Methanol-based γ-aminobutyric acid (GABA) production by genetically engineered Bacillus methanolicus strains. Industrial Crops and Products. 106, 12-20 (2017).
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2017 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2905383
Heider, S., Henke, N.A., Peters-Wendisch, P., Wendisch, V.F.: C50 carotenoids: Occurrence, biosynthesis, glycosylation and metabolic engineering for their overproduction. In: Singh, O.V. (ed.) Bio-pigmentation and Biotechnology implications. p. 107-126. John Wiley & Sons, Inc., Hoboken, NJ, USA (2017).
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2908286
Nærdal, I., Netzer, R., Irla, M., Krog, A., Heggeset, T.M.B., Wendisch, V.F., Brautaset, T.: L-lysine Production by Bacillus methanolicus: Genome-Based Mutational Analysis and L-lysine Secretion Engineering. Journal of Biotechnology. 244, 25-33 (2017).
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904856
Lauersen, K.J., Baier, T., Wichmann, J., Wördenweber, R., Mussgnug, J.H., Hübner, W., Huser, T., Kruse, O.: Efficient phototrophic production of a high-value sesquiterpenoid from the eukaryotic microalga Chlamydomonas reinhardtii. Metabolic Engineering. 38, 331-343 (2016).
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904976
Blifernez-Klassen, O., Wibberg, D., Winkler, A., Blom, J., Goesmann, A., Kalinowski, J., Kruse, O.: Complete Chloroplast and Mitochondrial Genome Sequences of the Hydrocarbon Oil-Producing Green MicroalgaBotryococcus brauniiRace B (Showa). Genome Announcements. 4, : e00524-16 (2016).
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904970
Maus, I., Wibberg, D., Winkler, A., Pühler, A., Schnürer, A., Schlüter, A.: Complete Genome Sequence of the MethanogenMethanoculleus bourgensisBA1 Isolated from a Biogas Reactor. Genome Announcements. 4, : e00568-16 (2016).
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905177
Stadermann, K.B., Holtgräwe, D., Weisshaar, B.: Chloroplast genome sequence of Arabidopsis thaliana accession Landsberg erecta assembled from Single-Molecule, Real-Time sequencing data. Genome Announcements. 4, : e00975-16 (2016).
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904978
Koeck, D.E., Maus, I., Wibberg, D., Winkler, A., Zverlov, V.V., Liebl, W., Pühler, A., Schwarz, W.H., Schlüter, A.: Draft Genome Sequence of Propionisporasp. Strain 2/2-37, a New Xylan-Degrading Bacterium Isolated from a Mesophilic Biogas Reactor. Genome Announcements. 4, e00609-16 (2016).
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904993
Koeck, D.E., Maus, I., Wibberg, D., Winkler, A., Zverlov, V.V., Liebl, W., Pühler, A., Schwarz, W.H., Schlüter, A.: Complete Genome Sequence of Herbinix luporumSD1D, a New Cellulose-Degrading Bacterium Isolated from a Thermophilic Biogas Reactor. Genome Announcements. 4, e00687-16 (2016).
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904325
Henke, N.A., Heider, S., Peters-Wendisch, P., Wendisch, V.F.: Production of the marine carotenoid astaxanthin by metabolically engineered Corynebacterium glutamicum. Marine Drugs. 14, : 124 (2016).
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904860
Wendisch, V.F., Fernandes de Brito, L., Gil Lopez, M., Hennig, G., Pfeifenschneider, J., Sgobba, E., Veldmann, K.H.: The flexible feedstock concept in Industrial Biotechnology: metabolic engineering of Escherichia coli, Corynebacterium glutamicum, Pseudomonas, Bacillus and yeast strains for access to alternative carbon sources. Journal of Biotechnology. 234, 139-157 (2016).
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901413
Gorzolka, K., Kölling, J., Nattkemper, T.W., Niehaus, K.: Spatio-Temporal Metabolite Profiling of the Barley Germination Process by MALDI MS Imaging. PLOS ONE. 11, : 0150208 (2016).
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904815
Stolze, Y., Bremges, A., Rumming, M., Henke, C., Maus, I., Pühler, A., Sczyrba, A., Schlüter, A.: Identification and genome reconstruction of abundant distinct taxa in microbiomes from one thermophilic and three mesophilic production-scale biogas plants. Biotechnology for Biofuels. 9, : 156 (2016).
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2906597
Jaeger, D., Pilger, C., Hachmeister, H., Oberländer, E., Wördenweber, R., Wichmann, J., Mussgnug, J.H., Huser, T., Kruse, O.: Label-free in vivo analysis of intracellular lipid droplets in the oleaginous microalga Monoraphidium neglectum by coherent Raman scattering microscopy. Scientific Reports. 6, : 35340 (2016).
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907679
Schwarzhans, J.P., Wibberg, D., Winkler, A., Luttermann, T., Kalinowski, J., Friehs, K.: Non-canonical integration events in Pichia pastoris encountered during standard transformation analysed with genome sequencing. Scientific Reports. 6, : 38952 (2016).
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903655
Schwarzhans, J.P., Wibberg, D., Winkler, A., Luttermann, T., Kalinowski, J., Friehs, K.: Integration event induced changes in recombinant protein productivity in Pichia pastoris discovered by whole genome sequencing and derived vector optimization. Microbial Cell Factories. 15, : 84 (2016).
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905495
Irla, M., Heggeset, T.M., Naerdal, I., Paul, L., Haugen, T., Le, S.B., Brautaset, T., Wendisch, V.F.: Genome-based genetic tool development for Bacillus methanolicus: theta- and rolling circle-replicating plasmids for inducible gene expression and application to methanol-based cadaverine production. Frontiers in Microbiology. 7, : 1481 (2016).
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903660
Steffens, T., Vorhölter, F.-J., Giampa, M., Hublik, G., Pühler, A., Niehaus, K.: The influence of a modified lipopolysaccharide O-antigen on the biosynthesis of xanthan in Xanthomonas campestris pv. campestris B100. BMC Microbiology. 16, : 93 (2016).
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2016 | Bielefelder E-Dissertation | PUB-ID: 2902049
Dörr, D.: Gene family-free genome comparison. Universität Bielefeld, Bielefeld (2016).
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2016 | Bielefelder E-Dissertation | PUB-ID: 2904907
Ortseifen, V.: Genombasierte Modellbildung zur Biosynthese von Acarviostatin-Metaboliten in drei Actinoplanes sp. SE50/110-Stämmen. Universität Bielefeld, Bielefeld (2016).
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907439
Lenta, B.N., Ngatchou, J., Frese, M., Ladoh-Yemeda, F., Voundi, S., Nardella, F., Michalek, C., Wibberg, D., Ngouela, S., Tsamo, E., Kaiser, M., Kalinowski, J., Sewald, N.: Purpureone, an antileishmanial ergochrome from the endophytic fungus Purpureocillium lilacinum. ZEITSCHRIFT FUR NATURFORSCHUNG SECTION B-A JOURNAL OF CHEMICAL SCIENCES. 71, 1159-1167 (2016).
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2906183
Schulte, F., Flaschel, E., Niehaus, K.: Proteome-Based Analysis of Colloidal Instability Enables the Detection of Haze-Active Proteins in Beer. Journal of Agricultural and Food Chemistry. 64, 6752-6761 (2016).
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2906715
Koeck, D.E., Wibberg, D., Maus, I., Winkler, A., Albersmeier, A., Zverlov, V.V., Liebl, W., Pühler, A., Schwarz, W.H., Schlüter, A.: Corrigendum to "Complete genome sequence of the cellulolytic thermophile Ruminoclostridium cellulosi wild-type strain DG5 isolated from a thermophilic biogas plant (J. Biotechnol. 188 (2014) 136–137)")". Journal of Biotechnology. 237, 35 (2016).
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905630
Gren, T., Ortseifen, V., Wibberg, D., Schneiker-Bekel, S., Bednarz, H., Niehaus, K., Zemke, T., Persicke, M., Pühler, A., Kalinowski, J.: Genetic engineering in Actinoplanes sp SE50/110-development of an intergeneric conjugation system for the introduction of actinophage-based integrative vectors. Journal of Biotechnology. 232, 79-88 (2016).
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907633
Lux, M., Krüger, J., Rinke, C., Maus, I., Schlüter, A., Woyke, T., Sczyrba, A., Hammer, B.: acdc – Automated Contamination Detection and Confidence estimation for single-cell genome data. BMC Bioinformatics. 17, : 543 (2016).
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904691
Martini, M.C., Wibberg, D., Lozano, M., Torres Tejerizo, G., Albicoro, F.J., Jaenicke, S., van Elsas, J.D., Petroni, A., Garcillan-Barcia, M.P., de la Cruz, F., Schlüter, A., Pühler, A., Pistorio, M., Lagares, A., Del Papa, M.F.: Genomics of high molecular weight plasmids isolated from an on-farm biopurification system. Scientific Reports. 6, : 28284 (2016).
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904704
Celis, J.S., Wibberg, D., Winkler, A., Wilke, T., Kalinowski, J.: Complete mitochondrial genome of the scleractinian coral Porites rus. Mitochondrial DNA. 27, 3695-3696 (2016).
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904047
Eberhardt, D., Jorge, J., Perez, F., Taniguchi, H., Wendisch, V.F.: Roles of export genes cgmA and lysE for the production of L-arginine and L-citrulline by Corynebacterium glutamicum. Appl Microbiol Biotechnol. 100, 8465-8474 (2016).
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903489
Maus, I., Cibis, K.G., Bremges, A., Stolze, Y., Wibberg, D., Tomazetto, G., Blom, J., Sczyrba, A., König, H., Pühler, A., Schlüter, A.: Genomic characterization of Defluviitoga tunisiensis L3, a key hydrolytic bacterium in a thermophilic biogas plant and its abundance as determined by metagenome fragment recruitment. Journal of Biotechnology. 232, 50-60 (2016).
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903302
Wibberg, D., Bremges, A., Dammann-Kalinowski, T., Maus, I., Igeño, M.I., Vogelsang, R., König, C., Luque-Almagro, V.M., Roldán, M.D., Sczyrba, A., Moreno-Vivián, C., Blasco, R., Pühler, A., Schlüter, A.: Finished genome sequence and methylome of the cyanide-degrading Pseudomonas pseudoalcaligenes strain CECT5344 as resolved by single-molecule real-time sequencing. Journal of Biotechnology. 232, 61-68 (2016).
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2902126
Liebe, S., Wibberg, D., Winkler, A., Pühler, A., Schlüter, A., Varrelmann, M.: Taxonomic analysis of the microbial community in stored sugar beets using high-throughput sequencing of different marker genes. FEMS Microbiology Ecology. 92, : fiw004 (2016).
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905170
Hilker, R., Stadermann, K.B., Schwengers, O., Anisiforov, E., Jaenicke, S., Weisshaar, B., Zimmermann, T., Goesmann, A.: ReadXplorer 2 - detailed read mapping analysis and visualization from one single source. Bioinformatics. 32, 3702-3708 (2016).
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905505
Wolf, T., Gren, T., Thieme, E., Wibberg, D., Zemke, T., Pühler, A., Kalinowski, J.: Targeted genome editing in the rare actinomycete Actinoplanes sp SE50/110 by using the CRISPR/Cas9 System. Journal of Biotechnology. 231, 122-128 (2016).
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905632
Walter, F., Grenz, S., Ortseifen, V., Persicke, M., Kalinowski, J.: Corynebacterium glutamicum ggtB encodes a functional gamma-glutamyl transpeptidase with gamma-glutamyl dipeptide synthetic and hydrolytic activity. Journal of Biotechnology. 232, 99-109 (2016).
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2016 | Kurzbeitrag Konferenz / Poster | PUB-ID: 2905827
Weisshaar, B., Himmelbauer, H., Schmidt, T., Holtgräwe, D., Minoche, A.E., Dohm, J., Stracke, R., Zakrzewski, F., Parol-Kryger, R., Stadermann, K.B., Schneider, J., Rosleff Sörensen, T., Kraft, T., Schulz, B.: Sugar Beet BeetMap-3, and Steps to Improve the Genome Assembly and Genome Sequence Annotation (W875). Presented at the Plant and Animal Genome XXIV Conference, San Diego, USA (2016).
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903593
Jorge, J., Leggewie, C., Wendisch, V.F.: A new metabolic route for the production of gamma-aminobutyric acid by Corynebacterium glutamicum. Amino Acids. 48, 2519-2531 (2016).
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903776
Perez, F., Peters-Wendisch, P., Wendisch, V.F.: Engineering Corynebacterium glutamicum for fast production of L-lysine and L-pipecolic acid. Appl. Microbiol. Biotechnol. 100, 8075-8090 (2016).
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901989
Wendisch, V.F., Jorge, J., Perez, F., Sgobba, E.: Updates on Industrial Production of Amino Acids using Corynebacterium glutamicum. World J Microbiol Biotechnol. 32, : 105 (2016).
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2900943
Langenkämper, D., Jakobi, T., Feld, D., Jelonek, L., Goesmann, A., Nattkemper, T.W.: Comparison of Acceleration Techniques for Selected Low-Level Bioinformatics Operations. Frontiers in Genetics. 7, : 5 (2016).
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901729
Bremges, A., Singer, E., Woyke, T., Sczyrba, A.: MeCorS: Metagenome-enabled error correction of single cell sequencing reads. Bioinformatics. 32, 2199-2201 (2016).
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901243
Wendler, S., Otto, A., Ortseifen, V., Bonn, F., Neshat, A., Schneiker-Bekel, S., Wolf, T., Zemke, T., Wehmeier, U.F., Hecker, M., Kalinowski, J., Becher, D., Pühler, A.: Comparative proteome analysis of Actinoplanes sp SE50/110 grown with maltose or glucose shows Minor differences for acarbose biosynthesis proteins but major differences for saccharide transporters. Journal of Proteomics. 131, 140-148 (2016).
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