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264 Publikationen

2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907915
Taniguchi, Hironori, Henke, Nadja Alina, Heider, Sabine, and Wendisch, Volker F. 2017. “Overexpression of the primary sigma factor gene sigA improved carotenoid production by Corynebacterium glutamicum: application to production of beta-carotene and the non-native linear C50 carotenoid bisanhydrobacterioruberin”. Metabolic Engineering Communications 4: 1-11.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2909045
Henke, Nadja Alina, Heider, Sabine, Hannibal, Silvin, Wendisch, Volker F., and Peters-Wendisch, Petra. 2017. “Isoprenoid pyrophosphate-dependent transcriptional regulation of carotenogenesis in Corynebacterium glutamicum”. Frontiers in Microbiology 8: 633.
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2017 | Sammelwerksbeitrag | PUB-ID: 2908205
Henke, Nadja Alina, Peters-Wendisch, Petra, and Wendisch, Volker F. 2017. “Carotenoid production by Corynebacterium: the workhorse of industrial amino acid production as host for production of a broad spectrum of C40 and C50 carotenoids”. In Carotenoids, ed. Dragan Cvetković, 1st ed., 159-173. Rijeka, Croatia: IN TECH d.o.o.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2910571
Jorge, João, Perez, Fernando, and Wendisch, Volker F. 2017. “A new metabolic route for the fermentative production of 5-aminovalerate from glucose and alternative carbon sources”. Bioresource Technology 245 (SI): 1701–1709.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2910629
Perez, Fernando, Ziert, Christian, Risse, Joe Max, and Wendisch, Volker F. 2017. “Improved fermentative production of the compatible solute ectoine by Corynebacterium glutamicum from glucose and alternative carbon sources”. J Biotechnol 258: 59-68.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2906474
Jorge, João, Nguyen, Anh Quynh, Perez, Fernando, Kind, Stefanie, and Wendisch, Volker F. 2017. “Improved fermentative production of gamma-aminobutyric acid via the putrescine route: systems metabolic engineering for production from glucose, amino sugars and xylose”. Biotechnology and Bioengineering 114 (4): 862-873.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2908307
Perez, Fernando, Risse, Joe Max, Friehs, Karl, and Wendisch, Volker F. 2017. “Fermentative production of L-pipecolic acid from glucose and alternative carbon sources”. Biotechnology Journal 12 (7): 1600646.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2906606
Fernandes de Brito, Luciana, Irla, Marta, Walter, Tatjana, and Wendisch, Volker F. 2017. “Magnesium-aminoclay-based transformation of Paenibacillus riograndensis and Paenibacillus polymyxa and development of tools for gene expression”. Applied Microbiology and Biotechnology 101 (2): 735-747.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911022
Corinti, Davide, Coletti, Cecilia, Re, Nazzareno, Piccirillo, Susanna, Giampa, Marco, Crestoni, Maria Elisa, and Fornarini, Simonetta. 2017. “Hydrolysis of cis-and transplatin: structure and reactivity of the aqua complexes in a solvent free environment”. RSC ADVANCES 7 (26): 15877-15884.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907021
Irla, Marta, Naerdal, Ingemar, Brautaset, Trygve, and Wendisch, Volker F. 2017. “Methanol-based γ-aminobutyric acid (GABA) production by genetically engineered Bacillus methanolicus strains”. Industrial Crops and Products 106 (SI): 12-20.
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2017 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2905383
Heider, Sabine, Henke, Nadja Alina, Peters-Wendisch, Petra, and Wendisch, Volker F. 2017. “C50 carotenoids: Occurrence, biosynthesis, glycosylation and metabolic engineering for their overproduction”. In Bio-pigmentation and Biotechnology implications, ed. Om V. Singh, 107-126. Hoboken, NJ, USA: John Wiley & Sons, Inc.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2908286
Nærdal, Ingemar, Netzer, Roman, Irla, Marta, Krog, Anne, Heggeset, Tonje Marita Bjerkan, Wendisch, Volker F., and Brautaset, Trygve. 2017. “L-lysine Production by Bacillus methanolicus: Genome-Based Mutational Analysis and L-lysine Secretion Engineering”. Journal of Biotechnology 244: 25-33.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904856
Lauersen, Kyle J., Baier, Thomas, Wichmann, Julian, Wördenweber, Robin, Mussgnug, Jan H., Hübner, Wolfgang, Huser, Thomas, and Kruse, Olaf. 2016. “Efficient phototrophic production of a high-value sesquiterpenoid from the eukaryotic microalga Chlamydomonas reinhardtii”. Metabolic Engineering 38: 331-343.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904976
Blifernez-Klassen, Olga, Wibberg, Daniel, Winkler, Anika, Blom, Jochen, Goesmann, Alexander, Kalinowski, Jörn, and Kruse, Olaf. 2016. “Complete Chloroplast and Mitochondrial Genome Sequences of the Hydrocarbon Oil-Producing Green MicroalgaBotryococcus brauniiRace B (Showa)”. Genome Announcements 4 (3): e00524-16.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904970
Maus, Irena, Wibberg, Daniel, Winkler, Anika, Pühler, Alfred, Schnürer, Anna, and Schlüter, Andreas. 2016. “Complete Genome Sequence of the MethanogenMethanoculleus bourgensisBA1 Isolated from a Biogas Reactor”. Genome Announcements 4 (3): e00568-16.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905177
Stadermann, Kai Bernd, Holtgräwe, Daniela, and Weisshaar, Bernd. 2016. “Chloroplast genome sequence of Arabidopsis thaliana accession Landsberg erecta assembled from Single-Molecule, Real-Time sequencing data”. Genome Announcements 4 (5): e00975-16.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904978
Koeck, Daniela E., Maus, Irena, Wibberg, Daniel, Winkler, Anika, Zverlov, Vladimir V., Liebl, Wolfgang, Pühler, Alfred, Schwarz, Wolfgang H., and Schlüter, Andreas. 2016. “Draft Genome Sequence of Propionisporasp. Strain 2/2-37, a New Xylan-Degrading Bacterium Isolated from a Mesophilic Biogas Reactor”. Genome Announcements 4 (3): e00609-16.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904993
Koeck, Daniela E., Maus, Irena, Wibberg, Daniel, Winkler, Anika, Zverlov, Vladimir V., Liebl, Wolfgang, Pühler, Alfred, Schwarz, Wolfgang H., and Schlüter, Andreas. 2016. “Complete Genome Sequence of Herbinix luporumSD1D, a New Cellulose-Degrading Bacterium Isolated from a Thermophilic Biogas Reactor”. Genome Announcements 4 (4): e00687-16.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904325
Henke, Nadja Alina, Heider, Sabine, Peters-Wendisch, Petra, and Wendisch, Volker F. 2016. “Production of the marine carotenoid astaxanthin by metabolically engineered Corynebacterium glutamicum”. Marine Drugs 14: 124.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904860
Wendisch, Volker F., Fernandes de Brito, Luciana, Gil Lopez, Marina, Hennig, Guido, Pfeifenschneider, Johannes, Sgobba, Elvira, and Veldmann, Kareen H. 2016. “The flexible feedstock concept in Industrial Biotechnology: metabolic engineering of Escherichia coli, Corynebacterium glutamicum, Pseudomonas, Bacillus and yeast strains for access to alternative carbon sources”. Journal of Biotechnology 234: 139-157.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901413
Gorzolka, Karin, Kölling, Jan, Nattkemper, Tim Wilhelm, and Niehaus, Karsten. 2016. “Spatio-Temporal Metabolite Profiling of the Barley Germination Process by MALDI MS Imaging”. PLOS ONE 11 (3): 0150208.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904815
Stolze, Yvonne, Bremges, Andreas, Rumming, Madis, Henke, Christian, Maus, Irena, Pühler, Alfred, Sczyrba, Alexander, and Schlüter, Andreas. 2016. “Identification and genome reconstruction of abundant distinct taxa in microbiomes from one thermophilic and three mesophilic production-scale biogas plants”. Biotechnology for Biofuels 9: 156.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2906597
Jaeger, Daniel, Pilger, Christian, Hachmeister, Henning, Oberländer, Elina, Wördenweber, Robin, Wichmann, Julian, Mussgnug, Jan H., Huser, Thomas, and Kruse, Olaf. 2016. “Label-free in vivo analysis of intracellular lipid droplets in the oleaginous microalga Monoraphidium neglectum by coherent Raman scattering microscopy”. Scientific Reports 6: 35340.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907679
Schwarzhans, Jan Philipp, Wibberg, Daniel, Winkler, Anika, Luttermann, Tobias, Kalinowski, Jörn, and Friehs, Karl. 2016. “Non-canonical integration events in Pichia pastoris encountered during standard transformation analysed with genome sequencing”. Scientific Reports 6: 38952.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903655
Schwarzhans, Jan Philipp, Wibberg, Daniel, Winkler, Anika, Luttermann, Tobias, Kalinowski, Jörn, and Friehs, Karl. 2016. “Integration event induced changes in recombinant protein productivity in Pichia pastoris discovered by whole genome sequencing and derived vector optimization”. Microbial Cell Factories 15: 84.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905495
Irla, Marta, Heggeset, Tonje M., Naerdal, Ingemar, Paul, Lidia, Haugen, Tone, Le, Simone B., Brautaset, Trygve, and Wendisch, Volker F. 2016. “Genome-based genetic tool development for Bacillus methanolicus: theta- and rolling circle-replicating plasmids for inducible gene expression and application to methanol-based cadaverine production”. Frontiers in Microbiology 7: 1481.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903660
Steffens, Tim, Vorhölter, Frank-Jörg, Giampa, Marco, Hublik, Gerd, Pühler, Alfred, and Niehaus, Karsten. 2016. “The influence of a modified lipopolysaccharide O-antigen on the biosynthesis of xanthan in Xanthomonas campestris pv. campestris B100”. BMC Microbiology 16: 93.
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2016 | Bielefelder E-Dissertation | PUB-ID: 2902049
Dörr, Daniel. 2016. Gene family-free genome comparison. Bielefeld: Universität Bielefeld.
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2016 | Bielefelder E-Dissertation | PUB-ID: 2904907
Ortseifen, Vera. 2016. Genombasierte Modellbildung zur Biosynthese von Acarviostatin-Metaboliten in drei Actinoplanes sp. SE50/110-Stämmen. Bielefeld: Universität Bielefeld.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907439
Lenta, Bruno Ndjakou, Ngatchou, Jules, Frese, Marcel, Ladoh-Yemeda, Flora, Voundi, Steve, Nardella, Flore, Michalek, Carmela, et al. 2016. “Purpureone, an antileishmanial ergochrome from the endophytic fungus Purpureocillium lilacinum”. ZEITSCHRIFT FUR NATURFORSCHUNG SECTION B-A JOURNAL OF CHEMICAL SCIENCES 71 (11): 1159-1167.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2906715
Koeck, Daniela E., Wibberg, Daniel, Maus, Irena, Winkler, Anika, Albersmeier, Andreas, Zverlov, Vladimir V., Liebl, Wolfgang, Pühler, Alfred, Schwarz, Wolfgang H., and Schlüter, Andreas. 2016. “Corrigendum to "Complete genome sequence of the cellulolytic thermophile Ruminoclostridium cellulosi wild-type strain DG5 isolated from a thermophilic biogas plant (J. Biotechnol. 188 (2014) 136–137)")"”. Journal of Biotechnology 237: 35.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2906183
Schulte, Fabian, Flaschel, Erwin, and Niehaus, Karsten. 2016. “Proteome-Based Analysis of Colloidal Instability Enables the Detection of Haze-Active Proteins in Beer”. Journal of Agricultural and Food Chemistry 64 (35): 6752-6761.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905630
Gren, Tetiana, Ortseifen, Vera, Wibberg, Daniel, Schneiker-Bekel, Susanne, Bednarz, Hanna, Niehaus, Karsten, Zemke, Till, Persicke, Marcus, Pühler, Alfred, and Kalinowski, Jörn. 2016. “Genetic engineering in Actinoplanes sp SE50/110-development of an intergeneric conjugation system for the introduction of actinophage-based integrative vectors”. Journal of Biotechnology 232: 79-88.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907633
Lux, Markus, Krüger, Jan, Rinke, Christian, Maus, Irena, Schlüter, Andreas, Woyke, Tanja, Sczyrba, Alexander, and Hammer, Barbara. 2016. “acdc – Automated Contamination Detection and Confidence estimation for single-cell genome data”. BMC Bioinformatics 17: 543.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904691
Martini, Maria C., Wibberg, Daniel, Lozano, Mauricio, Torres Tejerizo, Gonzalo, Albicoro, Francisco J., Jaenicke, Sebastian, van Elsas, Jan Dirk, et al. 2016. “Genomics of high molecular weight plasmids isolated from an on-farm biopurification system”. Scientific Reports 6: 28284.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904704
Celis, Juan Sebastian, Wibberg, Daniel, Winkler, Anika, Wilke, Thomas, and Kalinowski, Jörn. 2016. “Complete mitochondrial genome of the scleractinian coral Porites rus”. Mitochondrial DNA 27 (5): 3695-3696.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904047
Eberhardt, Dorit, Jorge, João, Perez, Fernando, Taniguchi, Hironori, and Wendisch, Volker F. 2016. “Roles of export genes cgmA and lysE for the production of L-arginine and L-citrulline by Corynebacterium glutamicum”. Appl Microbiol Biotechnol 100 (19): 8465-8474.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903489
Maus, Irena, Cibis, Katharina Gabriela, Bremges, Andreas, Stolze, Yvonne, Wibberg, Daniel, Tomazetto, Geizecler, Blom, Jochen, et al. 2016. “Genomic characterization of Defluviitoga tunisiensis L3, a key hydrolytic bacterium in a thermophilic biogas plant and its abundance as determined by metagenome fragment recruitment”. Journal of Biotechnology 232: 50-60.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903302
Wibberg, Daniel, Bremges, Andreas, Dammann-Kalinowski, Tanja, Maus, Irena, Igeño, Maria Isabel, Vogelsang, Ralph, König, Christoph, et al. 2016. “Finished genome sequence and methylome of the cyanide-degrading Pseudomonas pseudoalcaligenes strain CECT5344 as resolved by single-molecule real-time sequencing”. Journal of Biotechnology 232: 61-68.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2902126
Liebe, Sebastian, Wibberg, Daniel, Winkler, Anika, Pühler, Alfred, Schlüter, Andreas, and Varrelmann, Mark. 2016. “Taxonomic analysis of the microbial community in stored sugar beets using high-throughput sequencing of different marker genes”. FEMS Microbiology Ecology 92 (2): fiw004.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905170
Hilker, Rolf, Stadermann, Kai Bernd, Schwengers, Oliver, Anisiforov, Evgeny, Jaenicke, Sebastian, Weisshaar, Bernd, Zimmermann, Tobias, and Goesmann, Alexander. 2016. “ReadXplorer 2 - detailed read mapping analysis and visualization from one single source”. Bioinformatics 32 (24): 3702-3708.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905505
Wolf, Timo, Gren, Tetiana, Thieme, Eric, Wibberg, Daniel, Zemke, Till, Pühler, Alfred, and Kalinowski, Jörn. 2016. “Targeted genome editing in the rare actinomycete Actinoplanes sp SE50/110 by using the CRISPR/Cas9 System”. Journal of Biotechnology 231: 122-128.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905632
Walter, Frederik, Grenz, Sebastian, Ortseifen, Vera, Persicke, Marcus, and Kalinowski, Jörn. 2016. “Corynebacterium glutamicum ggtB encodes a functional gamma-glutamyl transpeptidase with gamma-glutamyl dipeptide synthetic and hydrolytic activity”. Journal of Biotechnology 232: 99-109.
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2016 | Kurzbeitrag Konferenz / Poster | PUB-ID: 2905827
Weisshaar, Bernd, Himmelbauer, Heinz, Schmidt, Thomas, Holtgräwe, Daniela, Minoche, Andre E., Dohm, Juliane, Stracke, Ralf, et al. 2016. “Sugar Beet BeetMap-3, and Steps to Improve the Genome Assembly and Genome Sequence Annotation (W875)”. Presented at the Plant and Animal Genome XXIV Conference, San Diego, USA .
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903776
Perez, Fernando, Peters-Wendisch, Petra, and Wendisch, Volker F. 2016. “Engineering Corynebacterium glutamicum for fast production of L-lysine and L-pipecolic acid”. Appl. Microbiol. Biotechnol. 100 (18): 8075-8090.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903593
Jorge, João, Leggewie, Christian, and Wendisch, Volker F. 2016. “A new metabolic route for the production of gamma-aminobutyric acid by Corynebacterium glutamicum”. Amino Acids 48 (11): 2519-2531.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901989
Wendisch, Volker F., Jorge, João, Perez, Fernando, and Sgobba, Elvira. 2016. “Updates on Industrial Production of Amino Acids using Corynebacterium glutamicum”. World J Microbiol Biotechnol 32 (6): 105.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2900943
Langenkämper, Daniel, Jakobi, Tobias, Feld, Dustin, Jelonek, Lukas, Goesmann, Alexander, and Nattkemper, Tim Wilhelm. 2016. “Comparison of Acceleration Techniques for Selected Low-Level Bioinformatics Operations”. Frontiers in Genetics 7: 5.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901729
Bremges, Andreas, Singer, Esther, Woyke, Tanja, and Sczyrba, Alexander. 2016. “MeCorS: Metagenome-enabled error correction of single cell sequencing reads”. Bioinformatics 32 (14): 2199-2201.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2902089
Lauersen, Kyle J., Willamme, Rémi, Coosemans, Nadine, Joris, Marine, Kruse, Olaf, and Remacle, Claire. 2016. “Peroxisomal microbodies are at the crossroads of acetate assimilation in the green microalga Chlamydomonas reinhardtii”. Algal Research 16: 266-274.
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