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264 Publikationen

2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907915
Taniguchi, H., Henke, N. A., Heider, S., & Wendisch, V. F. (2017). Overexpression of the primary sigma factor gene sigA improved carotenoid production by Corynebacterium glutamicum: application to production of beta-carotene and the non-native linear C50 carotenoid bisanhydrobacterioruberin. Metabolic Engineering Communications, 4, 1-11. doi:10.1016/j.meteno.2017.01.001
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2909045
Henke, N. A., Heider, S., Hannibal, S., Wendisch, V. F., & Peters-Wendisch, P. (2017). Isoprenoid pyrophosphate-dependent transcriptional regulation of carotenogenesis in Corynebacterium glutamicum. Frontiers in Microbiology, 8, 633. doi:10.3389/fmicb.2017.00633
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2017 | Sammelwerksbeitrag | PUB-ID: 2908205
Henke, N. A., Peters-Wendisch, P., & Wendisch, V. F. (2017). Carotenoid production by Corynebacterium: the workhorse of industrial amino acid production as host for production of a broad spectrum of C40 and C50 carotenoids. In D. Cvetković (Ed.), Carotenoids (1st ed., pp. 159-173). Rijeka, Croatia: IN TECH d.o.o. doi:10.5772/67631
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2910571
Jorge, J., Perez, F., & Wendisch, V. F. (2017). A new metabolic route for the fermentative production of 5-aminovalerate from glucose and alternative carbon sources. Bioresource Technology, 245(SI), 1701–1709. doi:10.1016/j.biortech.2017.04.108
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2910629
Perez, F., Ziert, C., Risse, J. M., & Wendisch, V. F. (2017). Improved fermentative production of the compatible solute ectoine by Corynebacterium glutamicum from glucose and alternative carbon sources. J Biotechnol, 258, 59-68. doi:10.1016/j.jbiotec.2017.04.039
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2906474
Jorge, J., Nguyen, A. Q., Perez, F., Kind, S., & Wendisch, V. F. (2017). Improved fermentative production of gamma-aminobutyric acid via the putrescine route: systems metabolic engineering for production from glucose, amino sugars and xylose. Biotechnology and Bioengineering, 114(4), 862-873. doi:10.1002/bit.26211
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2908307
Perez, F., Risse, J. M., Friehs, K., & Wendisch, V. F. (2017). Fermentative production of L-pipecolic acid from glucose and alternative carbon sources. Biotechnology Journal, 12(7), 1600646. doi:10.1002/biot.201600646
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2906606
Fernandes de Brito, L., Irla, M., Walter, T., & Wendisch, V. F. (2017). Magnesium-aminoclay-based transformation of Paenibacillus riograndensis and Paenibacillus polymyxa and development of tools for gene expression. Applied Microbiology and Biotechnology, 101(2), 735-747. doi:10.1007/s00253-016-7999-1
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911022
Corinti, D., Coletti, C., Re, N., Piccirillo, S., Giampa, M., Crestoni, M. E., & Fornarini, S. (2017). Hydrolysis of cis-and transplatin: structure and reactivity of the aqua complexes in a solvent free environment. RSC ADVANCES, 7(26), 15877-15884. doi:10.1039/c7ra01182b
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907021
Irla, M., Naerdal, I., Brautaset, T., & Wendisch, V. F. (2017). Methanol-based γ-aminobutyric acid (GABA) production by genetically engineered Bacillus methanolicus strains. Industrial Crops and Products, 106(SI), 12-20. doi:10.1016/j.indcrop.2016.11.050
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2017 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2905383
Heider, S., Henke, N. A., Peters-Wendisch, P., & Wendisch, V. F. (2017). C50 carotenoids: Occurrence, biosynthesis, glycosylation and metabolic engineering for their overproduction. In O. V. Singh (Ed.), Bio-pigmentation and Biotechnology implications (pp. 107-126). Hoboken, NJ, USA: John Wiley & Sons, Inc.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2908286
Nærdal, I., Netzer, R., Irla, M., Krog, A., Heggeset, T. M. B., Wendisch, V. F., & Brautaset, T. (2017). L-lysine Production by Bacillus methanolicus: Genome-Based Mutational Analysis and L-lysine Secretion Engineering. Journal of Biotechnology, 244, 25-33. doi:10.1016/j.jbiotec.2017.02.001
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904856
Lauersen, K. J., Baier, T., Wichmann, J., Wördenweber, R., Mussgnug, J. H., Hübner, W., Huser, T., et al. (2016). Efficient phototrophic production of a high-value sesquiterpenoid from the eukaryotic microalga Chlamydomonas reinhardtii. Metabolic Engineering, 38, 331-343. doi:10.1016/j.ymben.2016.07.013
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904976
Blifernez-Klassen, O., Wibberg, D., Winkler, A., Blom, J., Goesmann, A., Kalinowski, J., & Kruse, O. (2016). Complete Chloroplast and Mitochondrial Genome Sequences of the Hydrocarbon Oil-Producing Green MicroalgaBotryococcus brauniiRace B (Showa). Genome Announcements, 4(3), e00524-16. doi:10.1128/genomea.00524-16
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904970
Maus, I., Wibberg, D., Winkler, A., Pühler, A., Schnürer, A., & Schlüter, A. (2016). Complete Genome Sequence of the MethanogenMethanoculleus bourgensisBA1 Isolated from a Biogas Reactor. Genome Announcements, 4(3), e00568-16. doi:10.1128/genomea.00568-16
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905177
Stadermann, K. B., Holtgräwe, D., & Weisshaar, B. (2016). Chloroplast genome sequence of Arabidopsis thaliana accession Landsberg erecta assembled from Single-Molecule, Real-Time sequencing data. Genome Announcements, 4(5), e00975-16. doi:10.1128/genomeA.00975-16
PUB | PDF | DOI | WoS | PubMed | Europe PMC | GenBank
 
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904978
Koeck, D. E., Maus, I., Wibberg, D., Winkler, A., Zverlov, V. V., Liebl, W., Pühler, A., et al. (2016). Draft Genome Sequence of Propionisporasp. Strain 2/2-37, a New Xylan-Degrading Bacterium Isolated from a Mesophilic Biogas Reactor. Genome Announcements, 4(3), e00609-16. doi:10.1128/genomea.00609-16
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904993
Koeck, D. E., Maus, I., Wibberg, D., Winkler, A., Zverlov, V. V., Liebl, W., Pühler, A., et al. (2016). Complete Genome Sequence of Herbinix luporumSD1D, a New Cellulose-Degrading Bacterium Isolated from a Thermophilic Biogas Reactor. Genome Announcements, 4(4), e00687-16. doi:10.1128/genomea.00687-16
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904325
Henke, N. A., Heider, S., Peters-Wendisch, P., & Wendisch, V. F. (2016). Production of the marine carotenoid astaxanthin by metabolically engineered Corynebacterium glutamicum. Marine Drugs, 14, 124. doi:10.3390/md14070124
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904860
Wendisch, V. F., Fernandes de Brito, L., Gil Lopez, M., Hennig, G., Pfeifenschneider, J., Sgobba, E., & Veldmann, K. H. (2016). The flexible feedstock concept in Industrial Biotechnology: metabolic engineering of Escherichia coli, Corynebacterium glutamicum, Pseudomonas, Bacillus and yeast strains for access to alternative carbon sources. Journal of Biotechnology, 234, 139-157. doi:10.1016/j.jbiotec.2016.07.022
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901413
Gorzolka, K., Kölling, J., Nattkemper, T. W., & Niehaus, K. (2016). Spatio-Temporal Metabolite Profiling of the Barley Germination Process by MALDI MS Imaging. PLOS ONE, 11(3), 0150208. doi:10.1371/journal.pone.0150208
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904815
Stolze, Y., Bremges, A., Rumming, M., Henke, C., Maus, I., Pühler, A., Sczyrba, A., et al. (2016). Identification and genome reconstruction of abundant distinct taxa in microbiomes from one thermophilic and three mesophilic production-scale biogas plants. Biotechnology for Biofuels, 9, 156. doi:10.1186/s13068-016-0565-3
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2906597
Jaeger, D., Pilger, C., Hachmeister, H., Oberländer, E., Wördenweber, R., Wichmann, J., Mussgnug, J. H., et al. (2016). Label-free in vivo analysis of intracellular lipid droplets in the oleaginous microalga Monoraphidium neglectum by coherent Raman scattering microscopy. Scientific Reports, 6, 35340. doi:10.1038/srep35340
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907679
Schwarzhans, J. P., Wibberg, D., Winkler, A., Luttermann, T., Kalinowski, J., & Friehs, K. (2016). Non-canonical integration events in Pichia pastoris encountered during standard transformation analysed with genome sequencing. Scientific Reports, 6, 38952. doi:10.1038/srep38952
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903655
Schwarzhans, J. P., Wibberg, D., Winkler, A., Luttermann, T., Kalinowski, J., & Friehs, K. (2016). Integration event induced changes in recombinant protein productivity in Pichia pastoris discovered by whole genome sequencing and derived vector optimization. Microbial Cell Factories, 15, 84. doi:10.1186/s12934-016-0486-7
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905495
Irla, M., Heggeset, T. M., Naerdal, I., Paul, L., Haugen, T., Le, S. B., Brautaset, T., et al. (2016). Genome-based genetic tool development for Bacillus methanolicus: theta- and rolling circle-replicating plasmids for inducible gene expression and application to methanol-based cadaverine production. Frontiers in Microbiology, 7, 1481. doi:10.3389/fmicb.2016.01481
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903660
Steffens, T., Vorhölter, F. - J., Giampa, M., Hublik, G., Pühler, A., & Niehaus, K. (2016). The influence of a modified lipopolysaccharide O-antigen on the biosynthesis of xanthan in Xanthomonas campestris pv. campestris B100. BMC Microbiology, 16, 93. doi:10.1186/s12866-016-0710-y
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2016 | Bielefelder E-Dissertation | PUB-ID: 2902049
Dörr, D. (2016). Gene family-free genome comparison. Bielefeld: Universität Bielefeld.
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2016 | Bielefelder E-Dissertation | PUB-ID: 2904907
Ortseifen, V. (2016). Genombasierte Modellbildung zur Biosynthese von Acarviostatin-Metaboliten in drei Actinoplanes sp. SE50/110-Stämmen. Bielefeld: Universität Bielefeld.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907439
Lenta, B. N., Ngatchou, J., Frese, M., Ladoh-Yemeda, F., Voundi, S., Nardella, F., Michalek, C., et al. (2016). Purpureone, an antileishmanial ergochrome from the endophytic fungus Purpureocillium lilacinum. ZEITSCHRIFT FUR NATURFORSCHUNG SECTION B-A JOURNAL OF CHEMICAL SCIENCES, 71(11), 1159-1167. doi:10.1515/znb-2016-0128
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2906715
Koeck, D. E., Wibberg, D., Maus, I., Winkler, A., Albersmeier, A., Zverlov, V. V., Liebl, W., et al. (2016). Corrigendum to "Complete genome sequence of the cellulolytic thermophile Ruminoclostridium cellulosi wild-type strain DG5 isolated from a thermophilic biogas plant (J. Biotechnol. 188 (2014) 136–137)")". Journal of Biotechnology, 237, 35. doi:10.1016/j.jbiotec.2016.08.020
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2906183
Schulte, F., Flaschel, E., & Niehaus, K. (2016). Proteome-Based Analysis of Colloidal Instability Enables the Detection of Haze-Active Proteins in Beer. Journal of Agricultural and Food Chemistry, 64(35), 6752-6761. doi:10.1021/acs.jafc.6b02467
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905630
Gren, T., Ortseifen, V., Wibberg, D., Schneiker-Bekel, S., Bednarz, H., Niehaus, K., Zemke, T., et al. (2016). Genetic engineering in Actinoplanes sp SE50/110-development of an intergeneric conjugation system for the introduction of actinophage-based integrative vectors. Journal of Biotechnology, 232, 79-88. doi:10.1016/j.jbiotec.2016.05.012
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907633
Lux, M., Krüger, J., Rinke, C., Maus, I., Schlüter, A., Woyke, T., Sczyrba, A., et al. (2016). acdc – Automated Contamination Detection and Confidence estimation for single-cell genome data. BMC Bioinformatics, 17, 543. doi:10.1186/s12859-016-1397-7
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904691
Martini, M. C., Wibberg, D., Lozano, M., Torres Tejerizo, G., Albicoro, F. J., Jaenicke, S., van Elsas, J. D., et al. (2016). Genomics of high molecular weight plasmids isolated from an on-farm biopurification system. Scientific Reports, 6, 28284. doi:10.1038/srep28284
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904704
Celis, J. S., Wibberg, D., Winkler, A., Wilke, T., & Kalinowski, J. (2016). Complete mitochondrial genome of the scleractinian coral Porites rus. Mitochondrial DNA, 27(5), 3695-3696. doi:10.3109/19401736.2015.1079860
PUB | DOI | WoS | PubMed | Europe PMC
 
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904047
Eberhardt, D., Jorge, J., Perez, F., Taniguchi, H., & Wendisch, V. F. (2016). Roles of export genes cgmA and lysE for the production of L-arginine and L-citrulline by Corynebacterium glutamicum. Appl Microbiol Biotechnol, 100(19), 8465-8474. doi:10.1007/s00253-016-7695-1
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903489
Maus, I., Cibis, K. G., Bremges, A., Stolze, Y., Wibberg, D., Tomazetto, G., Blom, J., et al. (2016). Genomic characterization of Defluviitoga tunisiensis L3, a key hydrolytic bacterium in a thermophilic biogas plant and its abundance as determined by metagenome fragment recruitment. Journal of Biotechnology, 232, 50-60. doi:10.1016/j.jbiotec.2016.05.001
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903302
Wibberg, D., Bremges, A., Dammann-Kalinowski, T., Maus, I., Igeño, M. I., Vogelsang, R., König, C., et al. (2016). Finished genome sequence and methylome of the cyanide-degrading Pseudomonas pseudoalcaligenes strain CECT5344 as resolved by single-molecule real-time sequencing. Journal of Biotechnology, 232, 61-68. doi:10.1016/j.jbiotec.2016.04.008
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2902126
Liebe, S., Wibberg, D., Winkler, A., Pühler, A., Schlüter, A., & Varrelmann, M. (2016). Taxonomic analysis of the microbial community in stored sugar beets using high-throughput sequencing of different marker genes. FEMS Microbiology Ecology, 92(2), fiw004. doi:10.1093/femsec/fiw004
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905170
Hilker, R., Stadermann, K. B., Schwengers, O., Anisiforov, E., Jaenicke, S., Weisshaar, B., Zimmermann, T., et al. (2016). ReadXplorer 2 - detailed read mapping analysis and visualization from one single source. Bioinformatics, 32(24), 3702-3708.
PUB | PDF | DOI | WoS | PubMed | Europe PMC | NCBI BioProject
 
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905505
Wolf, T., Gren, T., Thieme, E., Wibberg, D., Zemke, T., Pühler, A., & Kalinowski, J. (2016). Targeted genome editing in the rare actinomycete Actinoplanes sp SE50/110 by using the CRISPR/Cas9 System. Journal of Biotechnology, 231, 122-128. doi:10.1016/j.jbiotec.2016.05.039
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905632
Walter, F., Grenz, S., Ortseifen, V., Persicke, M., & Kalinowski, J. (2016). Corynebacterium glutamicum ggtB encodes a functional gamma-glutamyl transpeptidase with gamma-glutamyl dipeptide synthetic and hydrolytic activity. Journal of Biotechnology, 232, 99-109. doi:10.1016/j.jbiotec.2015.10.019
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2016 | Kurzbeitrag Konferenz / Poster | PUB-ID: 2905827
Weisshaar, B., Himmelbauer, H., Schmidt, T., Holtgräwe, D., Minoche, A. E., Dohm, J., Stracke, R., et al. (2016). Sugar Beet BeetMap-3, and Steps to Improve the Genome Assembly and Genome Sequence Annotation (W875). Presented at the Plant and Animal Genome XXIV Conference, San Diego, USA
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903776
Perez, F., Peters-Wendisch, P., & Wendisch, V. F. (2016). Engineering Corynebacterium glutamicum for fast production of L-lysine and L-pipecolic acid. Appl. Microbiol. Biotechnol., 100(18), 8075-8090. doi:10.1007/s00253-016-7682-6
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903593
Jorge, J., Leggewie, C., & Wendisch, V. F. (2016). A new metabolic route for the production of gamma-aminobutyric acid by Corynebacterium glutamicum. Amino Acids, 48(11), 2519-2531. doi:10.1007/s00726-016-2272-6
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901989
Wendisch, V. F., Jorge, J., Perez, F., & Sgobba, E. (2016). Updates on Industrial Production of Amino Acids using Corynebacterium glutamicum. World J Microbiol Biotechnol, 32(6), 105. doi:10.1007/s11274-016-2060-1
PUB | DOI | WoS | PubMed | Europe PMC
 
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2900943
Langenkämper, D., Jakobi, T., Feld, D., Jelonek, L., Goesmann, A., & Nattkemper, T. W. (2016). Comparison of Acceleration Techniques for Selected Low-Level Bioinformatics Operations. Frontiers in Genetics, 7, 5. doi:10.3389/fgene.2016.00005
PUB | DOI | WoS | PubMed | Europe PMC
 
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901729
Bremges, A., Singer, E., Woyke, T., & Sczyrba, A. (2016). MeCorS: Metagenome-enabled error correction of single cell sequencing reads. Bioinformatics, 32(14), 2199-2201. doi:10.1093/bioinformatics/btw144
PUB | DOI | WoS | PubMed | Europe PMC
 
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2902089
Lauersen, K. J., Willamme, R., Coosemans, N., Joris, M., Kruse, O., & Remacle, C. (2016). Peroxisomal microbodies are at the crossroads of acetate assimilation in the green microalga Chlamydomonas reinhardtii. Algal Research, 16, 266-274. doi:10.1016/j.algal.2016.03.026
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