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264 Publikationen

2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907915
H. Taniguchi, N. A. Henke, S. Heider, and V. F. Wendisch, “Overexpression of the primary sigma factor gene sigA improved carotenoid production by Corynebacterium glutamicum: application to production of beta-carotene and the non-native linear C50 carotenoid bisanhydrobacterioruberin”, Metabolic Engineering Communications, 2017, 4, 1-11.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2909045
N. A. Henke, S. Heider, S. Hannibal, V. F. Wendisch, and P. Peters-Wendisch, “Isoprenoid pyrophosphate-dependent transcriptional regulation of carotenogenesis in Corynebacterium glutamicum”, Frontiers in Microbiology, 2017, 8, : 633.
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2017 | Sammelwerksbeitrag | PUB-ID: 2908205
N. A. Henke, P. Peters-Wendisch, and V. F. Wendisch, in Carotenoids (Ed.: D. Cvetković), In Tech D.o.o., Rijeka, Croatia, 2017, p. 159-173.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2910571
J. Jorge, F. Perez, and V. F. Wendisch, “A new metabolic route for the fermentative production of 5-aminovalerate from glucose and alternative carbon sources”, Bioresource Technology, 2017, 245, 1701–1709.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2910629
F. Perez, C. Ziert, J. M. Risse, and V. F. Wendisch, “Improved fermentative production of the compatible solute ectoine by Corynebacterium glutamicum from glucose and alternative carbon sources”, J Biotechnol, 2017, 258, 59-68.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2906474
J. Jorge, A. Q. Nguyen, F. Perez, S. Kind, and V. F. Wendisch, “Improved fermentative production of gamma-aminobutyric acid via the putrescine route: systems metabolic engineering for production from glucose, amino sugars and xylose”, Biotechnology and Bioengineering, 2017, 114, 862-873.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2908307
F. Perez, J. M. Risse, K. Friehs, and V. F. Wendisch, “Fermentative production of L-pipecolic acid from glucose and alternative carbon sources”, Biotechnology Journal, 2017, 12, : 1600646.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2906606
L. Fernandes de Brito, M. Irla, T. Walter, and V. F. Wendisch, “Magnesium-aminoclay-based transformation of Paenibacillus riograndensis and Paenibacillus polymyxa and development of tools for gene expression”, Applied Microbiology and Biotechnology, 2017, 101, 735-747.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911022
D. Corinti, C. Coletti, N. Re, S. Piccirillo, M. Giampa, M. E. Crestoni, and S. Fornarini, “Hydrolysis of cis-and transplatin: structure and reactivity of the aqua complexes in a solvent free environment”, RSC ADVANCES, 2017, 7, 15877-15884.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907021
M. Irla, I. Naerdal, T. Brautaset, and V. F. Wendisch, “Methanol-based γ-aminobutyric acid (GABA) production by genetically engineered Bacillus methanolicus strains”, Industrial Crops and Products, 2017, 106, 12-20.
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2017 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2905383
S. Heider, N. A. Henke, P. Peters-Wendisch, and V. F. Wendisch, in Bio-pigmentation and Biotechnology implications (Ed.: O.V. Singh), John Wiley & Sons, Inc., Hoboken, NJ, USA, 2017, p. 107-126.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2908286
I. Nærdal, R. Netzer, M. Irla, A. Krog, T. M. B. Heggeset, V. F. Wendisch, and T. Brautaset, “L-lysine Production by Bacillus methanolicus: Genome-Based Mutational Analysis and L-lysine Secretion Engineering”, Journal of Biotechnology, 2017, 244, 25-33.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904856
K. J. Lauersen, T. Baier, J. Wichmann, R. Wördenweber, J. H. Mussgnug, W. Hübner, T. Huser, and O. Kruse, “Efficient phototrophic production of a high-value sesquiterpenoid from the eukaryotic microalga Chlamydomonas reinhardtii”, Metabolic Engineering, 2016, 38, 331-343.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904976
O. Blifernez-Klassen, D. Wibberg, A. Winkler, J. Blom, A. Goesmann, J. Kalinowski, and O. Kruse, “Complete Chloroplast and Mitochondrial Genome Sequences of the Hydrocarbon Oil-Producing Green MicroalgaBotryococcus brauniiRace B (Showa)”, Genome Announcements, 2016, 4, : e00524-16.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904970
I. Maus, D. Wibberg, A. Winkler, A. Pühler, A. Schnürer, and A. Schlüter, “Complete Genome Sequence of the MethanogenMethanoculleus bourgensisBA1 Isolated from a Biogas Reactor”, Genome Announcements, 2016, 4, : e00568-16.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905177
K. B. Stadermann, D. Holtgräwe, and B. Weisshaar, “Chloroplast genome sequence of Arabidopsis thaliana accession Landsberg erecta assembled from Single-Molecule, Real-Time sequencing data”, Genome Announcements, 2016, 4, : e00975-16.
PUB | PDF | DOI | WoS | PubMed | Europe PMC | GenBank
 
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904978
D. E. Koeck, I. Maus, D. Wibberg, A. Winkler, V. V. Zverlov, W. Liebl, A. Pühler, W. H. Schwarz, and A. Schlüter, “Draft Genome Sequence of Propionisporasp. Strain 2/2-37, a New Xylan-Degrading Bacterium Isolated from a Mesophilic Biogas Reactor”, Genome Announcements, 2016, 4, e00609-16.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904993
D. E. Koeck, I. Maus, D. Wibberg, A. Winkler, V. V. Zverlov, W. Liebl, A. Pühler, W. H. Schwarz, and A. Schlüter, “Complete Genome Sequence of Herbinix luporumSD1D, a New Cellulose-Degrading Bacterium Isolated from a Thermophilic Biogas Reactor”, Genome Announcements, 2016, 4, e00687-16.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904325
N. A. Henke, S. Heider, P. Peters-Wendisch, and V. F. Wendisch, “Production of the marine carotenoid astaxanthin by metabolically engineered Corynebacterium glutamicum”, Marine Drugs, 2016, 14, : 124.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904860
V. F. Wendisch, L. Fernandes de Brito, M. Gil Lopez, G. Hennig, J. Pfeifenschneider, E. Sgobba, and K. H. Veldmann, “The flexible feedstock concept in Industrial Biotechnology: metabolic engineering of Escherichia coli, Corynebacterium glutamicum, Pseudomonas, Bacillus and yeast strains for access to alternative carbon sources”, Journal of Biotechnology, 2016, 234, 139-157.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901413
K. Gorzolka, J. Kölling, T. W. Nattkemper, and K. Niehaus, “Spatio-Temporal Metabolite Profiling of the Barley Germination Process by MALDI MS Imaging”, PLOS ONE, 2016, 11, : 0150208.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904815
Y. Stolze, A. Bremges, M. Rumming, C. Henke, I. Maus, A. Pühler, A. Sczyrba, and A. Schlüter, “Identification and genome reconstruction of abundant distinct taxa in microbiomes from one thermophilic and three mesophilic production-scale biogas plants”, Biotechnology for Biofuels, 2016, 9, : 156.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2906597
D. Jaeger, C. Pilger, H. Hachmeister, E. Oberländer, R. Wördenweber, J. Wichmann, J. H. Mussgnug, T. Huser, and O. Kruse, “Label-free in vivo analysis of intracellular lipid droplets in the oleaginous microalga Monoraphidium neglectum by coherent Raman scattering microscopy”, Scientific Reports, 2016, 6, : 35340.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907679
J. P. Schwarzhans, D. Wibberg, A. Winkler, T. Luttermann, J. Kalinowski, and K. Friehs, “Non-canonical integration events in Pichia pastoris encountered during standard transformation analysed with genome sequencing”, Scientific Reports, 2016, 6, : 38952.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903655
J. P. Schwarzhans, D. Wibberg, A. Winkler, T. Luttermann, J. Kalinowski, and K. Friehs, “Integration event induced changes in recombinant protein productivity in Pichia pastoris discovered by whole genome sequencing and derived vector optimization”, Microbial Cell Factories, 2016, 15, : 84.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905495
M. Irla, T. M. Heggeset, I. Naerdal, L. Paul, T. Haugen, S. B. Le, T. Brautaset, and V. F. Wendisch, “Genome-based genetic tool development for Bacillus methanolicus: theta- and rolling circle-replicating plasmids for inducible gene expression and application to methanol-based cadaverine production”, Frontiers in Microbiology, 2016, 7, : 1481.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903660
T. Steffens, F. - J. Vorhölter, M. Giampa, G. Hublik, A. Pühler, and K. Niehaus, “The influence of a modified lipopolysaccharide O-antigen on the biosynthesis of xanthan in Xanthomonas campestris pv. campestris B100”, BMC Microbiology, 2016, 16, : 93.
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2016 | Bielefelder E-Dissertation | PUB-ID: 2902049
D. Dörr, Gene family-free genome comparison, Universität Bielefeld, Bielefeld, 2016.
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2016 | Bielefelder E-Dissertation | PUB-ID: 2904907
V. Ortseifen, Genombasierte Modellbildung zur Biosynthese von Acarviostatin-Metaboliten in drei Actinoplanes sp. SE50/110-Stämmen, Universität Bielefeld, Bielefeld, 2016.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907439
B. N. Lenta, J. Ngatchou, M. Frese, F. Ladoh-Yemeda, S. Voundi, F. Nardella, C. Michalek, D. Wibberg, S. Ngouela, E. Tsamo, et al., “Purpureone, an antileishmanial ergochrome from the endophytic fungus Purpureocillium lilacinum”, ZEITSCHRIFT FUR NATURFORSCHUNG SECTION B-A JOURNAL OF CHEMICAL SCIENCES, 2016, 71, 1159-1167.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2906183
F. Schulte, E. Flaschel, and K. Niehaus, “Proteome-Based Analysis of Colloidal Instability Enables the Detection of Haze-Active Proteins in Beer”, Journal of Agricultural and Food Chemistry, 2016, 64, 6752-6761.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2906715
D. E. Koeck, D. Wibberg, I. Maus, A. Winkler, A. Albersmeier, V. V. Zverlov, W. Liebl, A. Pühler, W. H. Schwarz, and A. Schlüter, “Corrigendum to "Complete genome sequence of the cellulolytic thermophile Ruminoclostridium cellulosi wild-type strain DG5 isolated from a thermophilic biogas plant (J. Biotechnol. 188 (2014) 136–137)")"”, Journal of Biotechnology, 2016, 237, 35.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905630
T. Gren, V. Ortseifen, D. Wibberg, S. Schneiker-Bekel, H. Bednarz, K. Niehaus, T. Zemke, M. Persicke, A. Pühler, and J. Kalinowski, “Genetic engineering in Actinoplanes sp SE50/110-development of an intergeneric conjugation system for the introduction of actinophage-based integrative vectors”, Journal of Biotechnology, 2016, 232, 79-88.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907633
M. Lux, J. Krüger, C. Rinke, I. Maus, A. Schlüter, T. Woyke, A. Sczyrba, and B. Hammer, “acdc – Automated Contamination Detection and Confidence estimation for single-cell genome data”, BMC Bioinformatics, 2016, 17, : 543.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904691
M. C. Martini, D. Wibberg, M. Lozano, G. Torres Tejerizo, F. J. Albicoro, S. Jaenicke, J. D. van Elsas, A. Petroni, M. P. Garcillan-Barcia, F. de la Cruz, et al., “Genomics of high molecular weight plasmids isolated from an on-farm biopurification system”, Scientific Reports, 2016, 6, : 28284.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904704
J. S. Celis, D. Wibberg, A. Winkler, T. Wilke, and J. Kalinowski, “Complete mitochondrial genome of the scleractinian coral Porites rus”, Mitochondrial DNA, 2016, 27, 3695-3696.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904047
D. Eberhardt, J. Jorge, F. Perez, H. Taniguchi, and V. F. Wendisch, “Roles of export genes cgmA and lysE for the production of L-arginine and L-citrulline by Corynebacterium glutamicum”, Appl Microbiol Biotechnol, 2016, 100, 8465-8474.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903489
I. Maus, K. G. Cibis, A. Bremges, Y. Stolze, D. Wibberg, G. Tomazetto, J. Blom, A. Sczyrba, H. König, A. Pühler, et al., “Genomic characterization of Defluviitoga tunisiensis L3, a key hydrolytic bacterium in a thermophilic biogas plant and its abundance as determined by metagenome fragment recruitment”, Journal of Biotechnology, 2016, 232, 50-60.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903302
D. Wibberg, A. Bremges, T. Dammann-Kalinowski, I. Maus, M. I. Igeño, R. Vogelsang, C. König, V. M. Luque-Almagro, M. D. Roldán, A. Sczyrba, et al., “Finished genome sequence and methylome of the cyanide-degrading Pseudomonas pseudoalcaligenes strain CECT5344 as resolved by single-molecule real-time sequencing”, Journal of Biotechnology, 2016, 232, 61-68.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2902126
S. Liebe, D. Wibberg, A. Winkler, A. Pühler, A. Schlüter, and M. Varrelmann, “Taxonomic analysis of the microbial community in stored sugar beets using high-throughput sequencing of different marker genes”, FEMS Microbiology Ecology, 2016, 92, : fiw004.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905170
R. Hilker, K. B. Stadermann, O. Schwengers, E. Anisiforov, S. Jaenicke, B. Weisshaar, T. Zimmermann, and A. Goesmann, “ReadXplorer 2 - detailed read mapping analysis and visualization from one single source”, Bioinformatics, 2016, 32, 3702-3708.
PUB | PDF | DOI | WoS | PubMed | Europe PMC | NCBI BioProject
 
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905505
T. Wolf, T. Gren, E. Thieme, D. Wibberg, T. Zemke, A. Pühler, and J. Kalinowski, “Targeted genome editing in the rare actinomycete Actinoplanes sp SE50/110 by using the CRISPR/Cas9 System”, Journal of Biotechnology, 2016, 231, 122-128.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905632
F. Walter, S. Grenz, V. Ortseifen, M. Persicke, and J. Kalinowski, “Corynebacterium glutamicum ggtB encodes a functional gamma-glutamyl transpeptidase with gamma-glutamyl dipeptide synthetic and hydrolytic activity”, Journal of Biotechnology, 2016, 232, 99-109.
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2016 | Kurzbeitrag Konferenz / Poster | PUB-ID: 2905827
B. Weisshaar, H. Himmelbauer, T. Schmidt, D. Holtgräwe, A. E. Minoche, J. Dohm, R. Stracke, F. Zakrzewski, R. Parol-Kryger, K. B. Stadermann, et al., 2016.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903593
J. Jorge, C. Leggewie, and V. F. Wendisch, “A new metabolic route for the production of gamma-aminobutyric acid by Corynebacterium glutamicum”, Amino Acids, 2016, 48, 2519-2531.
PUB | DOI | WoS | PubMed | Europe PMC
 
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903776
F. Perez, P. Peters-Wendisch, and V. F. Wendisch, “Engineering Corynebacterium glutamicum for fast production of L-lysine and L-pipecolic acid”, Appl. Microbiol. Biotechnol., 2016, 100, 8075-8090.
PUB | DOI | WoS | PubMed | Europe PMC
 
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901989
V. F. Wendisch, J. Jorge, F. Perez, and E. Sgobba, “Updates on Industrial Production of Amino Acids using Corynebacterium glutamicum”, World J Microbiol Biotechnol, 2016, 32, : 105.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2900943
D. Langenkämper, T. Jakobi, D. Feld, L. Jelonek, A. Goesmann, and T. W. Nattkemper, “Comparison of Acceleration Techniques for Selected Low-Level Bioinformatics Operations”, Frontiers in Genetics, 2016, 7, : 5.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901729
A. Bremges, E. Singer, T. Woyke, and A. Sczyrba, “MeCorS: Metagenome-enabled error correction of single cell sequencing reads”, Bioinformatics, 2016, 32, 2199-2201.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901243
S. Wendler, A. Otto, V. Ortseifen, F. Bonn, A. Neshat, S. Schneiker-Bekel, T. Wolf, T. Zemke, U. F. Wehmeier, M. Hecker, et al., “Comparative proteome analysis of Actinoplanes sp SE50/110 grown with maltose or glucose shows Minor differences for acarbose biosynthesis proteins but major differences for saccharide transporters”, Journal of Proteomics, 2016, 131, 140-148.
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