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266 Publikationen

2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904474
Perez, Fernando, Vasco-Cardenas, María F., and Barreiro, Carlos. 2016. “Biotypes analysis of Corynebacterium glutamicum growing in dicarboxylic acids demonstrates the existence of industrially-relevant intra-species variations”. Journal of Proteomics 146: 172-183.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904234
Ortseifen, Vera, Stolze, Yvonne, Maus, Irena, Sczyrba, Alexander, Bremges, Andreas, Albaum, Stefan, Jaenicke, Sebastian, Fracowiak, Jochen, Pühler, Alfred, and Schlüter, Andreas. 2016. “An integrated metagenome and -proteome analysis of the microbial community residing in a biogas production plant”. Journal of Biotechnology 231: 268-279.
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2016 | Patent | PUB-ID: 2907839
Jorge, João, and Wendisch, Volker F. 28.06.2016. “Biological preparation of 5-aminovalerate”.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907079
Wippermann, Anna, Rupp, Oliver, Brinkrolf, Karina, Hoffrogge, Raimund, and Noll, Thomas. 2016. “Integrative analysis of DNA methylation and gene expression in butyrate-treated CHO cells”. Journal of Biotechnology 257: 150-161.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2761035
Arnold, Martin, Wibberg, Daniel, Blom, Jochen, Schatschneider, Sarah, Winkler, Anika, Kutter, Yvonne, Rückert, Christian, et al. 2015. “Draft Genome Sequence of Pseudomonas aeruginosa Strain WS136, a Highly Cytotoxic ExoS-Positive Wound Isolate Recovered from Pyoderma Gangrenosum”. Genome announcements 3 (4).
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2785064 OA
Krahn, Thomas, Wibberg, Daniel, Maus, Irena, Winkler, Anika, Nordmann, Patrice, Pühler, Alfred, Poirel, Laurent, and Schlüter, Andreas. 2015. “Complete Genome Sequence of the Clinical Strain Acinetobacter baumannii R2090 Carrying the Chromosomally Encoded Metallo-β-Lactamase GeneblaNDM-1”. Genome Announcements 3 (5): e01008-15.
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2015 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2702877
Leßmeier, Lennart, Zahoor ul Hassan, Ahmed, Lindner, Steffen, and Wendisch, Volker F. 2015. “Metabolic Engineering of *Corynebacterium glutamicum* for Alternative Carbon Source Utilization”. In *Corynebacterium glutamicum*: From Systems Biology to Biotechnological Applications, ed. Andreas Burkovski, 57-70. Caister Academic Press.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2758144
Wibberg, Daniel, Rupp, Oliver, Jelonek, Lukas, Kröber, Magdalena, Verwaaijen, Bart, Blom, Jochen, Winkler, Anika, et al. 2015. “Improved genome sequence of the phytopathogenic fungus Rhizoctonia solani AG1-IB 7/3/14 as established by deep mate-pair sequencing on the MiSeq (Illumina) system”. Journal of Biotechnology 203: 19-21.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2722138 OA
Kessler, Nikolas, Bonte, Anja, Albaum, Stefan, Mäder, Paul, Messmer, Monika, Goesmann, Alexander, Niehaus, Karsten, Langenkämper, Georg, and Nattkemper, Tim Wilhelm. 2015. “Learning to classify organic and conventional wheat - a machine-learning driven approach using the MeltDB 2.0 metabolomics analysis platform”. Frontiers in Bioinformatics and Computational Biology 3: 35.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2753011 OA
Lauersen, Kyle J., Huber, Isabel, Wichmann, Julian, Baier, Thomas, Leiter, Andreas, Gaukel, Volker, Kartushin, Viktor, et al. 2015. “Investigating the dynamics of recombinant protein secretion from a microalgal host”. Journal of Biotechnology 215: 62-71.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2712315 OA
Lauersen, Kyle J., Kruse, Olaf, and Mussgnug, Jan H. 2015. “Targeted expression of nuclear transgenes in Chlamydomonas reinhardtii with a versatile, modular vector toolkit”. Applied Microbiology and Biotechnology 99 (8): 3491-3503.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901297 OA
Wibberg, Daniel, Rupp, Oliver, Blom, Jochen, Jelonek, Lukas, Kröber, Magdalena, Verwaaijen, Bart, Goesmann, Alexander, et al. 2015. “Development of a Rhizoctonia solani AG1-IB Specific Gene Model Enables Comparative Genome Analyses between Phytopathogenic R-solani AG1-IA, AG1-IB, AG3 and AG8 Isolates”. Plos One 10 (12): e0144769.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2729771 OA
Nguyen, Anh Quynh, Komati Reddy, Gajendar, Schneider, Jens, and Wendisch, Volker F. 2015. “Fermentative production of the diamine putrescine: systems metabolic engineering of *Corynebacterium glutamicum*”. Metabolites 5: 211-231.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2768627 OA
Eikmeyer, Felix Gregor, Heinl, Stefan, Marx, Hans, Pühler, Alfred, Grabherr, Reingard, and Schlüter, Andreas. 2015. “Identification of Oxygen-Responsive Transcripts in the Silage Inoculant Lactobacillus buchneri CD034 by RNA Sequencing”. PLoS ONE 10 (7): e0134149.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2777468 OA
Freudenau, Inga, Lutter, Petra, Baier, Ruth, Schleef, Martin, Bednarz, Hanna, Lara, Alvaro R., and Niehaus, Karsten. 2015. “ColE1-Plasmid Production in Escherichia coli: Mathematical Simulation and Experimental Validation”. Frontiers in Bioengineering and Biotechnology 3: 127.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2775617 OA
Stadermann, Kai Bernd, Weisshaar, Bernd, and Holtgräwe, Daniela. 2015. “SMRT sequencing only de novo assembly of the sugar beet (Beta vulgaris) chloroplast genome”. BMC Bioinformatics 16: 295.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2764906 OA
Bremges, Andreas, Maus, Irena, Belmann, Peter, Eikmeyer, Felix Gregor, Winkler, Anika, Albersmeier, Andreas, Pühler, Alfred, Schlüter, Andreas, and Sczyrba, Alexander. 2015. “Deeply sequenced metagenome and metatranscriptome of a biogas-producing microbial community from an agricultural production-scale biogas plant”. GigaScience 4 (1): 33.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2900198 OA
Nolla Ardevol, Vimac, Peces, Miriam, Strous, Marc, and Tegetmeyer, Halina. 2015. “Metagenome from a Spirulina digesting biogas reactor: analysis via binning of contigs and classification of short reads”. BMC Microbiology 15: 277.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2706344 OA
Irla, Marta, Neshat, Armin, Brautaset, Trygve, Rückert, Christian, Kalinowski, Jörn, and Wendisch, Volker F. 2015. “Transcriptome analysis of thermophilic methylotrophic *Bacillus methanolicus* MGA3 using RNA-sequencing provides detailed insights into its previously uncharted transcriptional landscape”. BMC Genomics 16: 73.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2760033 OA
Nolla Ardevol, Vimac, Strous, Marc, and Tegetmeyer, Halina. 2015. “Anaerobic digestion of the microalga Spirulina at extreme alkaline conditions: biogas production, metagenome, and metatranscriptome”. Frontiers in Microbiology 6: 597.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2722382 OA
Stolze, Yvonne, Zakrzewski, Martha, Maus, Irena, Eikmeyer, Felix Gregor, Jaenicke, Sebastian, Rottmann, Nils, Siebner, Clemens, Pühler, Alfred, and Schlüter, Andreas. 2015. “Comparative metagenomics of biogas-producing microbial communities from production-scale biogas plants operating under wet or dry fermentation conditions”. Biotechnology for Biofuels 8: 14.
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2015 | Dissertation | Veröffentlicht | PUB-ID: 2902942
Walter, Frederik. 2015. Etablierung einer LC-ESI-MS-Plattform und Analyse der Biosynthese von L-Arginin und Gamma-Glutamyl-Dipeptiden in Corynebacterium glutamicum. Bielefeld.
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2015 | Dissertation | Veröffentlicht | PUB-ID: 2901374
Kulis-Horn, Robert. 2015. Untersuchung der L-Histidinbiosynthese in Corynebacterium glutamicum ATCC 13032 zur Erzeugung eines L-Histidinproduzenten. Bielefeld.
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2015 | Dissertation | Veröffentlicht | PUB-ID: 2901381
Eikmeyer, Felix Gregor. 2015. Untersuchung der Rolle von Lactobacillus buchneri CD034 bei der Bildung von Grassilage mittels nukleinsäurebasierter Methoden. Bielefeld.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2762833
Kohrs, Fabian, Wolter, Sophie, Benndorf, Dirk, Heyer, Robert, Hoffmann, Marcus, Rapp, Erdmann, Bremges, Andreas, Sczyrba, Alexander, Schlüter, Andreas, and Reichl, Udo. 2015. “Fractionation of biogas plant sludge material improves metaproteomic characterization to investigate metabolic activity of microbial communities”. Proteomics 15 (20): 3585-3589.
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2015 | Patent | PUB-ID: 2906692
Kind, Stefanie, and Jorge, João. 11.09.2015. “Process for preparing terminal amino carboxylic acids and amino aldehydes by means of a recombinant microorganism”.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2733521
Stoeveken, J., Singh, R., Kolkenbrock, S., Zakrzewski, Martha, Wibberg, Daniel, Eikmeyer, Felix Gregor, Pühler, Alfred, Schlüter, Andreas, and Moerschbacher, B. M. 2015. “Successful heterologous expression of a novel chitinase identified by sequence analyses of the metagenome from a chitin-enriched soil sample”. Journal of Biotechnology 201: 60-68.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2717648
Hahnke, Sarah, Maus, Irena, Wibberg, Daniel, Geizecler, Tomazetto, Pühler, Alfred, Klocke, Michael, and Schlüter, Andreas. 2015. “Complete genome sequence of the novel Porphyromonadaceae bacterium strain ING2-E5B isolated from a mesophilic lab-scale biogas reactor”. Journal of Biotechnology 193: 34-36.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2709783
Ortseifen, Vera, Winkler, Anika, Albersmeier, Andreas, Wendler, Sergej, Pühler, Alfred, Kalinowski, Jörn, and Rückert, Christian. 2015. “Complete Genome Sequence of the Actinobacterium Streptomyces glaucescens GLA.O (DSM 40922) consisting of a linear chromosome and one linear plasmid”. Journal of Biotechnology 194: 81-83.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2701466
Nguyen, Anh Quynh, Schneider, Jens, and Wendisch, Volker F. 2015. “Elimination of polyamine N-acetylation and regulatory engineering improved putrescine production by *Corynebacterium glutamicum*”. Journal of Biotechnology 201: 75-85.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2782501
Belmann, Peter, Dröge, Johannes, Bremges, Andreas, McHardy, Alice C, Sczyrba, Alexander, and Barton, Michael D. 2015. “Bioboxes: standardised containers for interchangeable bioinformatics software”. GigaScience 4: 47.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2764307
Wendler, Sergej, Otto, Andreas, Ortseifen, Vera, Bonn, Florian, Neshat, Armin, Schneiker-Bekel, Susanne, Walter, Frederik, et al. 2015. “Comprehensive proteome analysis of Actinoplanes sp SE50/110 highlighting the location of proteins encoded by the acarbose and the pyochelin biosynthesis gene cluster”. Journal of Proteomics 125: 1-16.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2758122
Wibberg, Daniel, Alkhateeb, Rabeaa, Winkler, Anika, Albersmeier, Andreas, Schatschneider, Sarah, Albaum, Stefan, Niehaus, Karsten, Hublik, Gerd, Pühler, Alfred, and Vorhölter, Frank-Jörg. 2015. “Draft genome of the xanthan producer Xanthomonas campestris NRRL B-1459 (ATCC 13951)”. Journal of Biotechnology 204: 45-46.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2758134
Maus, Irena, Cibis, Katharina Gabriela, Wibberg, Daniel, Winkler, Anika, Stolze, Yvonne, König, Helmut, Pühler, Alfred, and Schlüter, Andreas. 2015. “Complete genome sequence of the strain Defluviitoga tunisiensis L3, isolated from a thermophilic, production-scale biogas plant”. Journal of Biotechnology 203: 17-18.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2733509
Maus, Irena, Wibberg, Daniel, Stantscheff, Robbin, Stolze, Yvonne, Blom, Jochen, Eikmeyer, Felix Gregor, Fracowiak, Jochen, König, Helmut, Pühler, Alfred, and Schlüter, Andreas. 2015. “Insights into the annotated genome sequence of Methanoculleus bourgensis MS2(T), related to dominant methanogens in biogas-producing plants”. Journal of Biotechnology 201: 43-53.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2718773
Wippermann, Anna, Rupp, Oliver, Brinkrolf, Karina, Hoffrogge, Raimund, and Noll, Thomas. 2015. “The DNA methylation landscape of Chinese hamster ovary (CHO) DP-12 cells”. Journal of Biotechnology 199: 38-46.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901214
Koeck, Daniela E., Maus, Irena, Wibberg, Daniel, Winkler, Anika, Zverlov, Vladimir V., Liebl, Wolfgang, Pühler, Alfred, Schwarz, Wolfgang H., and Schlüter, Andreas. 2015. “Draft genome sequence of Herbinix hemicellulosilytica T3/55(T), a new thermophilic cellulose degrading bacterium isolated from a thermophilic biogas reactor”. Journal of Biotechnology 214: 59-60.
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2015 | Dissertation | Veröffentlicht | PUB-ID: 2901404
Nguyen, Anh Quynh. 2015. Metabolic engineering for improving putrescine production in C. glutamicum.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2778477
Dziewit, Lukasz, Czarnecki, Jakub, Prochwicz, Emilia, Wibberg, Daniel, Schlüter, Andreas, Pühler, Alfred, and Bartosik, Dariusz. 2015. “Genome-guided insight into the methylotrophy of Paracoccus aminophilus JCM 7686”. Frontiers in Microbiology 6: 852.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2764185
Schafhauser, Thomas, Wibberg, Daniel, Rückert, Christian, Winkler, Anika, Flor, Liane, van Pée, Karl-Heinz, Fewer, David P., et al. 2015. “Draft genome sequence of Talaromyces islandicus ("Penicillium islandicum") WF-38-12, a neglected mold with significant biotechnological potential”. Journal of Biotechnology 211: 101-102.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2759737
Kulis-Horn, Robert, Persicke, Marcus, and Kalinowski, Jörn. 2015. “Corynebacterium glutamicum ATP-phosphoribosyl transferases suitable for L-histidine production - Strategies for the elimination of feedback inhibition”. Journal of Biotechnology 206: 26-37.
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2015 | Dissertation | PUB-ID: 2763163
Wendler, Sergej. 2015. Comprehensive proteome analysis of Actinoplanes sp. SE50/110, the producer of the medically important secondary metabolite acarbose. Bielefeld.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2731076
Dziewit, Lukasz, Pyzik, Adam, Szuplewska, Magdalena, Matlakowska, Renata, Mielnicki, Sebastian, Wibberg, Daniel, Schlüter, Andreas, Pühler, Alfred, and Bartosik, Dariusz. 2015. “Diversity and role of plasmids in adaptation of bacteria inhabiting the Lubin copper mine in Poland, an environment rich in heavy metals”. Frontiers in Microbiology 6: 152.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2731292
Tomazetto, Geicecler, Wibberg, Daniel, Schlüter, Andreas, and Oliveira, Valeria M. 2015. “New FeFe-hydrogenase genes identified in a metagenomic fosmid library from a municipal wastewater treatment plant as revealed by high-throughput sequencing”. Research in Microbiology 166 (1): 9-19.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2732884
Fernandes de Brito, Luciana, Bach, Evelise, Kalinowski, Jörn, Rückert, Christian, Wibberg, Daniel, Passaglia, Luciane, and Wendisch, Volker F. 2015. “Complete genome sequence of Paenibacillus riograndensis SBR5T, a Gram-positive diazotrophic rhizobacterium”. Journal of Biotechnology 207: 30-31.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2722001
Schwarzhans, Jan Philipp, Cholewa, Dominik, Grimm, Philipp, Beshay, Usama, Risse, Joe Max, Friehs, Karl, and Flaschel, Erwin. 2015. “Dependency of the fatty acid composition of Euglena gracilis on growth phase and culture conditions”. Journal of Applied Phycology 27 (4): 1389-1399.
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2706029 OA
Kessler, Nikolas, Walter, Frederik, Persicke, Marcus, Albaum, Stefan, Kalinowski, Jörn, Goesmann, Alexander, Niehaus, Karsten, and Nattkemper, Tim Wilhelm. 2014. “ALLocator: An Interactive Web Platform for the Analysis of Metabolomic LC-ESI-MS Datasets, Enabling Semi-Automated, User-Revised Compound Annotation and Mass Isotopomer Ratio Analysis”. PLoS ONE 9 (11): e113909.
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2014 | Dissertation | PUB-ID: 2763160
Lauersen, Kyle J. 2014. Heterologous expression of an ice binding protein from the microalgae Chlamydomonas reinhardtii with an optimized nuclear gene expression system. Bielefeld.
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2678800 OA
Kröber, Magdalena, Wibberg, Daniel, Grosch, Rita, Eikmeyer, Felix Gregor, Verwaaijen, Bart, Chowdhury, Soumitra P., Hartmann, Anton, Pühler, Alfred, and Schlüter, Andreas. 2014. “Effect of the strain Bacillus amyloliquefaciens FZB42 on the microbial community in the rhizosphere of lettuce under field conditions analyzed by whole metagenome sequencing”. Frontiers in Microbiology 5: 252.
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2687033 OA
Dörr, Daniel, Stoye, Jens, Böcker, Sebastian, and Jahn, Katharina. 2014. “Identifying Gene Clusters by Discovering Common Intervals in Indeterminate Strings”. BMC Genomics 15 (Suppl. 6: Proc. of RECOMB-CG 2014): S2.
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