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266 Publikationen

2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2317371
Küberl A, Schneider J, Thallinger GG, Anderl I, Wibberg D, Hajek T, Jaenicke S, Brinkrolf K, Goesmann A, Szczepanowski R, Pühler A, Schwab H, Glieder A, Pichler H (2011)
High-quality genome sequence of Pichia pastoris CBS7435.
Journal of Biotechnology 154(4): 312-320.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2326465
Torres Tejerizo G, Florencia Del Papa M, Draghi W, Lozano M, de los Angeles Giusti M, Martini C, Eugenia Salas M, Salto I, Wibberg D, Szczepanowski R, Weidner S, Schlüter A, Lagares A, Pistorio M (2011)
First genomic analysis of the broad-host-range Rhizobium sp LPU83 strain, a member of the low-genetic diversity Oregon-like Rhizobium sp group.
Journal of Biotechnology 155(1): 3-10.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2396576
Becker J, Hackel M, Jakobi T, Rupp O, Schneider J, Szczepanowski R, Bekel T, Borth N, Goesmann A, Grillari J, Kaltschmidt C, Noll T, Pühler A, Tauch A, Brinkrolf K (2011)
Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing.
Journal of Biotechnology 156(3): 227-235.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2375645
Barzantny H, Brune I, Tauch A (2011)
Molecular basis of human body odour formation: insights deduced from corynebacterial genome sequences.
International Journal of Cosmetic Science 34(1): 2-11.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2326445
Schneider J, Blom J, Jaenicke S, Linke B, Brinkrolf K, Neuweger H, Tauch A, Goesmann A (2011)
RAPYD - Rapid Annotation Platform for Yeast Data.
Journal of Biotechnology 155(1): 118-126.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2326518
Szczepanowski R, Eikmeyer FG, Harfmann J, Blom J, Rogers LM, Top EM, Schlüter A (2011)
Sequencing and comparative analysis of IncP-1 alpha antibiotic resistance plasmids reveal a highly conserved backbone and differences within accessory regions.
Journal of Biotechnology 155(1): 95-103.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2454721
Cerdeira LT, Cruz Schneider MP, Pinto AC, de Almeida SS, dos Santos AR, Vieira Barbosa EG, Ali A, Aburjaile FF, Carvalho de Abreu VA, Guimaraes LC, Soares S de C, Dorella FA, Rocha FS, Bol E, Caracciolo Gomes de Sa PH, Lopes TS, Barbosa MS, Carneiro AR, Juca Ramos RT, da Rocha Coimbra NA, Jeronimo Lima AR, Barh D, Jain N, Tiwari S, Raja R, Zambare V, Ghosh P, Trost E, Tauch A, Miyoshi A, Azevedo V, Silva A (2011)
Complete Genome Sequence of Corynebacterium pseudotuberculosis Strain CIP 52.97, Isolated from a Horse in Kenya.
Journal of Bacteriology 193(24): 7025-7026.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2453768
Becker J, Timmermann C, Jakobi T, Rupp O, Szczepanowski R, Hackl M, Goesmann A, Tauch A, Borth N, Grillari J, Pühler A, Noll T, Brinkrolf K (2011)
Next-generation sequencing of the CHO cell transcriptome.
BMC Proceedings 5(Suppl. 8): P6.
PUB | DOI
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2404874
Schatschneider S, Vorhölter F-J, Rückert C, Becker A, Eisenreich W, Pühler A, Niehaus K (2011)
Genome-enabled determination of amino acid biosynthesis in Xanthomonas campestris pv. campestris and identification of biosynthetic pathways for alanine, glycine, and isoleucine by 13C-isotopologue profiling.
Molecular Genetics and Genomics 286(3-4): 247-259.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2447751
Jaenicke S, Zakrzewski M, Jünemann S, Pühler A, Goesmann A, Schlüter A (2011)
Analysis of the Metagenome from a Biogas-Producing Microbial Community by Means of Bioinformatics Methods.
In: Handbook of Molecular Microbial Ecology II: Metagenomics in Different Habitats. de Bruijn FJ (Ed); Wiley-Blackwell: 403-414.
PUB | DOI
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2289952
Blom J, Jakobi T, Doppmeier D, Jaenicke S, Kalinowski J, Stoye J, Goesmann A (2011)
Exact and complete short-read alignment to microbial genomes using Graphics Processing Unit programming.
Bioinformatics 27(10): 1351-1358.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2289971
Ruiz JC, D'Afonseca V, Silva A, Ali A, Pinto AC, Santos AR, Rocha AAMC, Lopes DO, Dorella FA, Pacheco LGC, Costa MP, Turk MZ, Seyffert N, Moraes PMRO, Soares SC, Almeida SS, Castro TLP, Abreu VAC, Trost E, Baumbach J, Tauch A, Schneider MPC, McCulloch J, Cerdeira LT, Ramos RTJ, Zerlotini A, Dominitini A, Resende DM, Coser EM, Oliveira LM, Pedrosa AL, Vieira CU, Guimaraes CT, Bartholomeu DC, Oliveira DM, Santos FR, Rabelo EM, Lobo FP, Franco GR, Costa AF, Castro IM, Costa Dias SR, Ferro JA, Ortega JM, Paiva LV, Goulart LR, Almeida JF, Ferro MIT, Carneiro NP, Falcao PRK, Grynberg P, Teixeira SMR, Brommonschenkel S, Oliveira SC, Meyer R, Moore RJ, Miyoshi A, Oliveira GC, Azevedo V (2011)
Evidence for Reductive Genome Evolution and Lateral Acquisition of Virulence Functions in Two Corynebacterium pseudotuberculosis Strains.
PLoS ONE 6(4): e18551.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2323705 OA
Langenkämper D, Kölling J, Abouna S, Khan M, Niehaus K, Nattkemper TW (2011)
TICAL - a web-tool for multivariate image clustering and data topology preserving visualization.
Presented at the Microscopic Image Analysis with Applications in Biology (MIAAB), Heidelberg, Germany.
PUB | PDF | Download (ext.)
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2411181
Cerdeira LT, Pinto AC, Schneider MPC, de Almeida SS, Dos Santos AR, Barbosa EGV, Ali A, Barbosa MS, Carneiro AR, Ramos RTJ, de Oliveira RS, Barh D, Barve N, Zambare V, Belchior SE, Guimaraes LC, de Castro Soares S, Dorella FA, Rocha FS, de Abreu VAC, Tauch A, Trost E, Miyoshi A, Azevedo V, Silva A (2011)
Whole-Genome Sequence of Corynebacterium pseudotuberculosis PAT10 Strain Isolated from Sheep in Patagonia, Argentina.
Journal of Bacteriology 193(22): 6420-6421.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Im Druck | PUB-ID: 2017892
Schneiker-Bekel S, Wibberg D, Bekel T, Blom J, Linke B, Neuweger H, Stiens M, Vorhölter F-J, Weidner S, Goesmann A, Pühler A, Schlüter A (In Press)
The complete genome sequence of the dominant Sinorhizobium meliloti field isolate SM11 extends the S. meliloti pan-genome.
Journal of Biotechnology 155(1): 20-33.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2003276
Jaenicke S, Ander C, Bekel T, Bisdorf R, Dröge M, Gartemann K-H, Jünemann S, Kaiser O, Krause L, Tille F, Zakrzewski M, Pühler A, Schlüter A, Goesmann A (2011)
Comparative and Joint Analysis of Two Metagenomic Datasets from a Biogas Fermenter Obtained by 454-Pyrosequencing.
PLoS ONE 6(1): e14519.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2087955
Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Höner zu Siederdissen C, Bort JAH, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Pühler A, Borth N, Grillari J (2011)
Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering.
Journal of Biotechnology 153(1-2): 62-75.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1968054
Silva A, Schneider MPC, Cerdeira L, Barbosa MS, Ramos RTJ, Carneiro AR, Santos R, Lima M, D'Afonseca V, Almeida SS, Santos AR, Soares SC, Pinto AC, Ali A, Dorella FA, Rocha F, Carvalho de Abreu VA, Trost E, Tauch A, Shpigel N, Miyoshi A, Azevedo V (2011)
Complete Genome Sequence of Corynebacterium pseudotuberculosis I19, a Strain Isolated from a Cow in Israel with Bovine Mastitis.
Journal of Bacteriology 193(1): 323-324.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2003180
Brune I, Barzantny H, Kloetzel M, Jones J, James G, Tauch A (2011)
Identification of McbR as transcription regulator of aecD and genes involved in methionine and cysteine biosynthesis in Corynebacterium jeikeium K411.
Journal of Biotechnology 151(1): 22-29.
PUB | DOI | WoS | PubMed | Europe PMC
 
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1929692
Schneider J, Vorhölter F-J, Trost E, Blom J, Musa YR, Neuweger H, Niehaus K, Schatschneider S, Tauch A, Goesmann A (2010)
CARMEN - Comparative Analysis and in silico Reconstruction of organism-specific MEtabolic Networks.
Genetics and Molecular Research 9(3): 1660-1672.
PUB | DOI | WoS | PubMed | Europe PMC
 

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