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266 Publikationen

2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904860
Wendisch VF, Fernandes de Brito L, Gil Lopez M, et al. The flexible feedstock concept in Industrial Biotechnology: metabolic engineering of Escherichia coli, Corynebacterium glutamicum, Pseudomonas, Bacillus and yeast strains for access to alternative carbon sources. Journal of Biotechnology. 2016;234:139-157.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901413
Gorzolka K, Kölling J, Nattkemper TW, Niehaus K. Spatio-Temporal Metabolite Profiling of the Barley Germination Process by MALDI MS Imaging. PLOS ONE. 2016;11(3): 0150208.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904815
Stolze Y, Bremges A, Rumming M, et al. Identification and genome reconstruction of abundant distinct taxa in microbiomes from one thermophilic and three mesophilic production-scale biogas plants. Biotechnology for Biofuels. 2016;9: 156.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2906597
Jaeger D, Pilger C, Hachmeister H, et al. Label-free in vivo analysis of intracellular lipid droplets in the oleaginous microalga Monoraphidium neglectum by coherent Raman scattering microscopy. Scientific Reports. 2016;6: 35340.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907679
Schwarzhans JP, Wibberg D, Winkler A, Luttermann T, Kalinowski J, Friehs K. Non-canonical integration events in Pichia pastoris encountered during standard transformation analysed with genome sequencing. Scientific Reports. 2016;6: 38952.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903655
Schwarzhans JP, Wibberg D, Winkler A, Luttermann T, Kalinowski J, Friehs K. Integration event induced changes in recombinant protein productivity in Pichia pastoris discovered by whole genome sequencing and derived vector optimization. Microbial Cell Factories. 2016;15: 84.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905495
Irla M, Heggeset TM, Naerdal I, et al. Genome-based genetic tool development for Bacillus methanolicus: theta- and rolling circle-replicating plasmids for inducible gene expression and application to methanol-based cadaverine production. Frontiers in Microbiology. 2016;7: 1481.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903660
Steffens T, Vorhölter F-J, Giampa M, Hublik G, Pühler A, Niehaus K. The influence of a modified lipopolysaccharide O-antigen on the biosynthesis of xanthan in Xanthomonas campestris pv. campestris B100. BMC Microbiology. 2016;16: 93.
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2016 | Bielefelder E-Dissertation | PUB-ID: 2902049
Dörr D. Gene family-free genome comparison. Bielefeld: Universität Bielefeld; 2016.
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2016 | Bielefelder E-Dissertation | PUB-ID: 2904907
Ortseifen V. Genombasierte Modellbildung zur Biosynthese von Acarviostatin-Metaboliten in drei Actinoplanes sp. SE50/110-Stämmen. Bielefeld: Universität Bielefeld; 2016.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907439
Lenta BN, Ngatchou J, Frese M, et al. Purpureone, an antileishmanial ergochrome from the endophytic fungus Purpureocillium lilacinum. ZEITSCHRIFT FUR NATURFORSCHUNG SECTION B-A JOURNAL OF CHEMICAL SCIENCES. 2016;71(11):1159-1167.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2906183
Schulte F, Flaschel E, Niehaus K. Proteome-Based Analysis of Colloidal Instability Enables the Detection of Haze-Active Proteins in Beer. Journal of Agricultural and Food Chemistry. 2016;64(35):6752-6761.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2906715
Koeck DE, Wibberg D, Maus I, et al. Corrigendum to "Complete genome sequence of the cellulolytic thermophile Ruminoclostridium cellulosi wild-type strain DG5 isolated from a thermophilic biogas plant (J. Biotechnol. 188 (2014) 136–137)")". Journal of Biotechnology. 2016;237:35.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905630
Gren T, Ortseifen V, Wibberg D, et al. Genetic engineering in Actinoplanes sp SE50/110-development of an intergeneric conjugation system for the introduction of actinophage-based integrative vectors. Journal of Biotechnology. 2016;232:79-88.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907633
Lux M, Krüger J, Rinke C, et al. acdc – Automated Contamination Detection and Confidence estimation for single-cell genome data. BMC Bioinformatics. 2016;17: 543.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904047
Eberhardt D, Jorge J, Perez F, Taniguchi H, Wendisch VF. Roles of export genes cgmA and lysE for the production of L-arginine and L-citrulline by Corynebacterium glutamicum. Appl Microbiol Biotechnol. 2016;100(19):8465-8474.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904691
Martini MC, Wibberg D, Lozano M, et al. Genomics of high molecular weight plasmids isolated from an on-farm biopurification system. Scientific Reports. 2016;6: 28284.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904704
Celis JS, Wibberg D, Winkler A, Wilke T, Kalinowski J. Complete mitochondrial genome of the scleractinian coral Porites rus. Mitochondrial DNA. 2016;27(5):3695-3696.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903489
Maus I, Cibis KG, Bremges A, et al. Genomic characterization of Defluviitoga tunisiensis L3, a key hydrolytic bacterium in a thermophilic biogas plant and its abundance as determined by metagenome fragment recruitment. Journal of Biotechnology. 2016;232:50-60.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903302
Wibberg D, Bremges A, Dammann-Kalinowski T, et al. Finished genome sequence and methylome of the cyanide-degrading Pseudomonas pseudoalcaligenes strain CECT5344 as resolved by single-molecule real-time sequencing. Journal of Biotechnology. 2016;232:61-68.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2902126
Liebe S, Wibberg D, Winkler A, Pühler A, Schlüter A, Varrelmann M. Taxonomic analysis of the microbial community in stored sugar beets using high-throughput sequencing of different marker genes. FEMS Microbiology Ecology. 2016;92(2): fiw004.
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2016 | Kurzbeitrag Konferenz / Poster | PUB-ID: 2905827
Weisshaar B, Himmelbauer H, Schmidt T, et al. Sugar Beet BeetMap-3, and Steps to Improve the Genome Assembly and Genome Sequence Annotation (W875). Presented at the Plant and Animal Genome XXIV Conference, San Diego, USA.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905170
Hilker R, Stadermann KB, Schwengers O, et al. ReadXplorer 2 - detailed read mapping analysis and visualization from one single source. Bioinformatics. 2016;32(24):3702-3708.
PUB | PDF | DOI | WoS | PubMed | Europe PMC | NCBI BioProject
 
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905505
Wolf T, Gren T, Thieme E, et al. Targeted genome editing in the rare actinomycete Actinoplanes sp SE50/110 by using the CRISPR/Cas9 System. Journal of Biotechnology. 2016;231:122-128.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905632
Walter F, Grenz S, Ortseifen V, Persicke M, Kalinowski J. Corynebacterium glutamicum ggtB encodes a functional gamma-glutamyl transpeptidase with gamma-glutamyl dipeptide synthetic and hydrolytic activity. Journal of Biotechnology. 2016;232:99-109.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903593
Jorge J, Leggewie C, Wendisch VF. A new metabolic route for the production of gamma-aminobutyric acid by Corynebacterium glutamicum. Amino Acids. 2016;48(11):2519-2531.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903776
Perez F, Peters-Wendisch P, Wendisch VF. Engineering Corynebacterium glutamicum for fast production of L-lysine and L-pipecolic acid. Appl. Microbiol. Biotechnol. 2016;100(18):8075-8090.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901989
Wendisch VF, Jorge J, Perez F, Sgobba E. Updates on Industrial Production of Amino Acids using Corynebacterium glutamicum. World J Microbiol Biotechnol. 2016;32(6): 105.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2900943
Langenkämper D, Jakobi T, Feld D, Jelonek L, Goesmann A, Nattkemper TW. Comparison of Acceleration Techniques for Selected Low-Level Bioinformatics Operations. Frontiers in Genetics. 2016;7: 5.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901729
Bremges A, Singer E, Woyke T, Sczyrba A. MeCorS: Metagenome-enabled error correction of single cell sequencing reads. Bioinformatics. 2016;32(14):2199-2201.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901243
Wendler S, Otto A, Ortseifen V, et al. Comparative proteome analysis of Actinoplanes sp SE50/110 grown with maltose or glucose shows Minor differences for acarbose biosynthesis proteins but major differences for saccharide transporters. Journal of Proteomics. 2016;131:140-148.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2902089
Lauersen KJ, Willamme R, Coosemans N, Joris M, Kruse O, Remacle C. Peroxisomal microbodies are at the crossroads of acetate assimilation in the green microalga Chlamydomonas reinhardtii. Algal Research. 2016;16:266-274.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901675
Krahn T, Wibberg D, Maus I, et al. Intraspecies transfer of the chromosomally encoded Acinetobacter baumannii blaNDM-1 carbapenemase gene. Antimicrobial Agents and Chemotherapy. 2016;60(5):3032-3040.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901808
Alkhateeb R, Vorhölter F-J, Rückert C, et al. Genome wide transcription start sites analysis of the Xanthomonas campestris pv. campestris B100 with insights into the gum gene cluster directing the biosynthesis of the exopolysaccharide xanthan. J Biotechnol. 2016;225:18-28.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905993
Giampa M, Lissel M, Patschkowski T, et al. Maleic anhydride proton sponge as a novel MALDI matrix for the visualization of small molecules (< 250 m/z) in brain tumors by routine MALDI ToF imaging mass spectrometry. Chemical Communications. 2016;52(63):9801-9804.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905260
Maus I, Koeck DE, Cibis KG, et al. Unraveling the microbiome of a thermophilic biogas plant by metagenome and metatranscriptome analysis complemented by characterization of bacterial and archaeal isolates. Biotechnology for Biofuels. 2016;9(1): 171.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2906720
Nguyen TV, Wibberg D, Battenberg K, et al. An assemblage of Frankia Cluster II strains from California contains the canonical nod genes and also the sulfotransferase gene nodH. BMC Genomics. 2016;17: 796.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905504
Kröber M, Verwaaijen B, Wibberg D, Winkler A, Pühler A, Schlüter A. Comparative transcriptome analysis of the biocontrol strain Bacillus amyloliquefaciens FZB42 as response to biofilm formation analyzed by RNA sequencing. Journal of Biotechnology. 2016;231:212-223.
PUB | DOI | WoS | PubMed | Europe PMC
 
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905629
Tomazetto G, Hahnke S, Koeck DE, et al. Complete genome analysis of Clostridium bornimense strain M2/40(T). A new acidogenic Clostridium species isolated from a mesophilic two-phase laboratory-scale biogas reactor. Journal of Biotechnology. 2016;232:38-49.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905631
Leßmeier L, Alkhateeb R, Schulte F, et al. Applying DNA affinity chromatography to specifically screen for sucrose-related DNA-binding transcriptional regulators of Xanthomonas campestris. Journal of Biotechnology. 2016;232:89-98.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904234
Ortseifen V, Stolze Y, Maus I, et al. An integrated metagenome and -proteome analysis of the microbial community residing in a biogas production plant. Journal of Biotechnology. 2016;231:268-279.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904474
Perez F, Vasco-Cardenas MF, Barreiro C. Biotypes analysis of Corynebacterium glutamicum growing in dicarboxylic acids demonstrates the existence of industrially-relevant intra-species variations. Journal of Proteomics. 2016;146:172-183.
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2016 | Patent | PUB-ID: 2907839
Jorge J, Wendisch VF. Biological preparation of 5-aminovalerate. 28.06.2016.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907079
Wippermann A, Rupp O, Brinkrolf K, Hoffrogge R, Noll T. Integrative analysis of DNA methylation and gene expression in butyrate-treated CHO cells. Journal of Biotechnology. 2016;257:150-161.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2761035
Arnold M, Wibberg D, Blom J, et al. Draft Genome Sequence of Pseudomonas aeruginosa Strain WS136, a Highly Cytotoxic ExoS-Positive Wound Isolate Recovered from Pyoderma Gangrenosum. Genome announcements. 2015;3(4).
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2785064
Krahn T, Wibberg D, Maus I, et al. Complete Genome Sequence of the Clinical Strain Acinetobacter baumannii R2090 Carrying the Chromosomally Encoded Metallo-β-Lactamase GeneblaNDM-1. Genome Announcements. 2015;3(5): e01008-15.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2015 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2702877
Leßmeier L, Zahoor ul Hassan A, Lindner S, Wendisch VF. Metabolic Engineering of *Corynebacterium glutamicum* for Alternative Carbon Source Utilization. In: Burkovski A, ed. *Corynebacterium glutamicum*: From Systems Biology to Biotechnological Applications. Caister Academic Press; 2015: 57-70.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2758144
Wibberg D, Rupp O, Jelonek L, et al. Improved genome sequence of the phytopathogenic fungus Rhizoctonia solani AG1-IB 7/3/14 as established by deep mate-pair sequencing on the MiSeq (Illumina) system. Journal of Biotechnology. 2015;203:19-21.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2722138
Kessler N, Bonte A, Albaum S, et al. Learning to classify organic and conventional wheat - a machine-learning driven approach using the MeltDB 2.0 metabolomics analysis platform. Frontiers in Bioinformatics and Computational Biology. 2015;3: 35.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2753011
Lauersen KJ, Huber I, Wichmann J, et al. Investigating the dynamics of recombinant protein secretion from a microalgal host. Journal of Biotechnology. 2015;215:62-71.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2712315
Lauersen KJ, Kruse O, Mussgnug JH. Targeted expression of nuclear transgenes in Chlamydomonas reinhardtii with a versatile, modular vector toolkit. Applied Microbiology and Biotechnology. 2015;99(8):3491-3503.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901297
Wibberg D, Rupp O, Blom J, et al. Development of a Rhizoctonia solani AG1-IB Specific Gene Model Enables Comparative Genome Analyses between Phytopathogenic R-solani AG1-IA, AG1-IB, AG3 and AG8 Isolates. Plos One. 2015;10(12): e0144769.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2729771
Nguyen AQ, Komati Reddy G, Schneider J, Wendisch VF. Fermentative production of the diamine putrescine: systems metabolic engineering of *Corynebacterium glutamicum*. Metabolites. 2015;5:211-231.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2768627
Eikmeyer FG, Heinl S, Marx H, Pühler A, Grabherr R, Schlüter A. Identification of Oxygen-Responsive Transcripts in the Silage Inoculant Lactobacillus buchneri CD034 by RNA Sequencing. PLoS ONE. 2015;10(7): e0134149.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2777468
Freudenau I, Lutter P, Baier R, et al. ColE1-Plasmid Production in Escherichia coli: Mathematical Simulation and Experimental Validation. Frontiers in Bioengineering and Biotechnology. 2015;3: 127.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2775617
Stadermann KB, Weisshaar B, Holtgräwe D. SMRT sequencing only de novo assembly of the sugar beet (Beta vulgaris) chloroplast genome. BMC Bioinformatics. 2015;16: 295.
PUB | PDF | DOI | WoS | PubMed | Europe PMC | GenBank
 
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2764906
Bremges A, Maus I, Belmann P, et al. Deeply sequenced metagenome and metatranscriptome of a biogas-producing microbial community from an agricultural production-scale biogas plant. GigaScience. 2015;4(1): 33.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2900198
Nolla Ardevol V, Peces M, Strous M, Tegetmeyer H. Metagenome from a Spirulina digesting biogas reactor: analysis via binning of contigs and classification of short reads. BMC Microbiology. 2015;15: 277.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2706344
Irla M, Neshat A, Brautaset T, Rückert C, Kalinowski J, Wendisch VF. Transcriptome analysis of thermophilic methylotrophic *Bacillus methanolicus* MGA3 using RNA-sequencing provides detailed insights into its previously uncharted transcriptional landscape. BMC Genomics. 2015;16: 73.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2760033
Nolla Ardevol V, Strous M, Tegetmeyer H. Anaerobic digestion of the microalga Spirulina at extreme alkaline conditions: biogas production, metagenome, and metatranscriptome. Frontiers in Microbiology. 2015;6: 597.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2722382
Stolze Y, Zakrzewski M, Maus I, et al. Comparative metagenomics of biogas-producing microbial communities from production-scale biogas plants operating under wet or dry fermentation conditions. Biotechnology for Biofuels. 2015;8: 14.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2015 | Dissertation | Veröffentlicht | PUB-ID: 2902942
Walter F. Etablierung einer LC-ESI-MS-Plattform und Analyse der Biosynthese von L-Arginin und Gamma-Glutamyl-Dipeptiden in Corynebacterium glutamicum. Bielefeld; 2015.
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2015 | Dissertation | Veröffentlicht | PUB-ID: 2901374
Kulis-Horn R. Untersuchung der L-Histidinbiosynthese in Corynebacterium glutamicum ATCC 13032 zur Erzeugung eines L-Histidinproduzenten. Bielefeld; 2015.
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2015 | Dissertation | Veröffentlicht | PUB-ID: 2901381
Eikmeyer FG. Untersuchung der Rolle von Lactobacillus buchneri CD034 bei der Bildung von Grassilage mittels nukleinsäurebasierter Methoden. Bielefeld; 2015.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2762833
Kohrs F, Wolter S, Benndorf D, et al. Fractionation of biogas plant sludge material improves metaproteomic characterization to investigate metabolic activity of microbial communities. Proteomics. 2015;15(20):3585-3589.
PUB | DOI | WoS | PubMed | Europe PMC
 
2015 | Patent | PUB-ID: 2906692
Kind S, Jorge J. Process for preparing terminal amino carboxylic acids and amino aldehydes by means of a recombinant microorganism. 11.09.2015.
PUB
 
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2733521
Stoeveken J, Singh R, Kolkenbrock S, et al. Successful heterologous expression of a novel chitinase identified by sequence analyses of the metagenome from a chitin-enriched soil sample. Journal of Biotechnology. 2015;201:60-68.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2717648
Hahnke S, Maus I, Wibberg D, et al. Complete genome sequence of the novel Porphyromonadaceae bacterium strain ING2-E5B isolated from a mesophilic lab-scale biogas reactor. Journal of Biotechnology. 2015;193:34-36.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2709783
Ortseifen V, Winkler A, Albersmeier A, et al. Complete Genome Sequence of the Actinobacterium Streptomyces glaucescens GLA.O (DSM 40922) consisting of a linear chromosome and one linear plasmid. Journal of Biotechnology. 2015;194:81-83.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2701466
Nguyen AQ, Schneider J, Wendisch VF. Elimination of polyamine N-acetylation and regulatory engineering improved putrescine production by *Corynebacterium glutamicum*. Journal of Biotechnology. 2015;201:75-85.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2782501
Belmann P, Dröge J, Bremges A, McHardy AC, Sczyrba A, Barton MD. Bioboxes: standardised containers for interchangeable bioinformatics software. GigaScience. 2015;4: 47.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2764307
Wendler S, Otto A, Ortseifen V, et al. Comprehensive proteome analysis of Actinoplanes sp SE50/110 highlighting the location of proteins encoded by the acarbose and the pyochelin biosynthesis gene cluster. Journal of Proteomics. 2015;125:1-16.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2758122
Wibberg D, Alkhateeb R, Winkler A, et al. Draft genome of the xanthan producer Xanthomonas campestris NRRL B-1459 (ATCC 13951). Journal of Biotechnology. 2015;204:45-46.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2758134
Maus I, Cibis KG, Wibberg D, et al. Complete genome sequence of the strain Defluviitoga tunisiensis L3, isolated from a thermophilic, production-scale biogas plant. Journal of Biotechnology. 2015;203:17-18.
PUB | DOI | WoS | PubMed | Europe PMC
 
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2718773
Wippermann A, Rupp O, Brinkrolf K, Hoffrogge R, Noll T. The DNA methylation landscape of Chinese hamster ovary (CHO) DP-12 cells. Journal of Biotechnology. 2015;199:38-46.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2733509
Maus I, Wibberg D, Stantscheff R, et al. Insights into the annotated genome sequence of Methanoculleus bourgensis MS2(T), related to dominant methanogens in biogas-producing plants. Journal of Biotechnology. 2015;201:43-53.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901214
Koeck DE, Maus I, Wibberg D, et al. Draft genome sequence of Herbinix hemicellulosilytica T3/55(T), a new thermophilic cellulose degrading bacterium isolated from a thermophilic biogas reactor. Journal of Biotechnology. 2015;214:59-60.
PUB | DOI | WoS | PubMed | Europe PMC
 
2015 | Dissertation | Veröffentlicht | PUB-ID: 2901404
Nguyen AQ. Metabolic engineering for improving putrescine production in C. glutamicum.; 2015.
PUB
 
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2778477
Dziewit L, Czarnecki J, Prochwicz E, et al. Genome-guided insight into the methylotrophy of Paracoccus aminophilus JCM 7686. Frontiers in Microbiology. 2015;6: 852.
PUB | DOI | WoS | PubMed | Europe PMC
 
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2764185
Schafhauser T, Wibberg D, Rückert C, et al. Draft genome sequence of Talaromyces islandicus ("Penicillium islandicum") WF-38-12, a neglected mold with significant biotechnological potential. Journal of Biotechnology. 2015;211:101-102.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2759737
Kulis-Horn R, Persicke M, Kalinowski J. Corynebacterium glutamicum ATP-phosphoribosyl transferases suitable for L-histidine production - Strategies for the elimination of feedback inhibition. Journal of Biotechnology. 2015;206:26-37.
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2015 | Dissertation | PUB-ID: 2763163
Wendler S. Comprehensive proteome analysis of Actinoplanes sp. SE50/110, the producer of the medically important secondary metabolite acarbose. Bielefeld; 2015.
PUB
 
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2731076
Dziewit L, Pyzik A, Szuplewska M, et al. Diversity and role of plasmids in adaptation of bacteria inhabiting the Lubin copper mine in Poland, an environment rich in heavy metals. Frontiers in Microbiology. 2015;6: 152.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2731292
Tomazetto G, Wibberg D, Schlüter A, Oliveira VM. New FeFe-hydrogenase genes identified in a metagenomic fosmid library from a municipal wastewater treatment plant as revealed by high-throughput sequencing. Research in Microbiology. 2015;166(1):9-19.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2732884
Fernandes de Brito L, Bach E, Kalinowski J, et al. Complete genome sequence of Paenibacillus riograndensis SBR5T, a Gram-positive diazotrophic rhizobacterium. Journal of Biotechnology. 2015;207:30-31.
PUB | DOI | WoS | PubMed | Europe PMC
 
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2722001
Schwarzhans JP, Cholewa D, Grimm P, et al. Dependency of the fatty acid composition of Euglena gracilis on growth phase and culture conditions. Journal of Applied Phycology. 2015;27(4):1389-1399.
PUB | DOI | WoS
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2706029
Kessler N, Walter F, Persicke M, et al. ALLocator: An Interactive Web Platform for the Analysis of Metabolomic LC-ESI-MS Datasets, Enabling Semi-Automated, User-Revised Compound Annotation and Mass Isotopomer Ratio Analysis. PLoS ONE. 2014;9(11):e113909.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2014 | Dissertation | PUB-ID: 2763160
Lauersen KJ. Heterologous expression of an ice binding protein from the microalgae Chlamydomonas reinhardtii with an optimized nuclear gene expression system. Bielefeld; 2014.
PUB
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2678800
Kröber M, Wibberg D, Grosch R, et al. Effect of the strain Bacillus amyloliquefaciens FZB42 on the microbial community in the rhizosphere of lettuce under field conditions analyzed by whole metagenome sequencing. Frontiers in Microbiology. 2014;5: 252.
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2687033
Dörr D, Stoye J, Böcker S, Jahn K. Identifying Gene Clusters by Discovering Common Intervals in Indeterminate Strings. BMC Genomics. 2014;15(Suppl. 6: Proc. of RECOMB-CG 2014):S2.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2685362
Lechner M, Hernandez-Rosales M, Dörr D, et al. Orthology Detection Combining Clustering and Synteny for Very Large Datasets. PLoS ONE. 2014;9(8):e105015.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2682811
Lübke N-C, Wolf T, Braun R, Rückert C, Kalinowski J. Vom Schärfesensor zur mikrobiellen Brennstoffzelle. BIOspektrum. 2014;20(4):468-469.
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2679399
Neshat A, Mentz A, Rückert C, Kalinowski J. Transcriptome sequencing revealed the transcriptional organization at ribosome-mediated attenuation sites in Corynebacterium glutamicum and identified a novel attenuator involved in aromatic amino acid biosynthesis. Journal of biotechnology. 2014;190:55-63.
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2014 | Bielefelder E-Dissertation | PUB-ID: 2723541
Ander C. Bioinformatic methods for the analysis and comparison of metagenomes and metatranscriptomes. Bielefeld: Universitätsbibliothek Bielefeld; 2014.
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2014 | Dissertation | PUB-ID: 2717323
Zahoor ul Hassan A. Metabolic engineering of Corynebacterium glutamicum for glycolate production. Bielefeld; 2014.
PUB
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2717549
Geizecler T, Hahnke S, Maus I, et al. Complete genome sequence of Peptoniphilus sp strain ING2-D1G isolated from a mesophilic lab-scale completely stirred tank reactor utilizing maize silage in co-digestion with pig and cattle manure for biomethanation. Journal of Biotechnology. 2014;192:59-61.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Bielefelder E-Dissertation | PUB-ID: 2770185
Nolla Ardevol V. Anaerobic digestion of the microalga Spirulina at alkaline conditions (pH~10; 2.0 M Na+): biogas production and metagenome analysis. Bielefeld: Bielefeld University; 2014.
PUB | PDF
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2674387
Hilker R, Stadermann KB, Doppmeier D, et al. ReadXplorer - Visualization and Analysis of Mapped Sequences. Bioinformatics. 2014;30(16):2247-2254.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2665038
Schwientek P, Neshat A, Kalinowski J, et al. Improving the genome annotation of the acarbose producer Actinoplanes sp. SE50/110 by sequencing enriched 5'-ends of primary transcripts. Journal of Biotechnology. 2014;190:85-95.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Bielefelder E-Dissertation | PUB-ID: 2718661
Pfeifer-Sancar K. Entwicklung der Transkriptomsequenzierung und Anwendung zur Analyse des Transkriptoms von Corynebacterium glutamicum. Bielefeld: Universität Bielefeld; 2014.
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