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136 Publikationen

2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2003355
Giegerich, R., & Hoener Zu Siederdissen, C., 2011. Semantics and Ambiguity of Stochastic RNA Family Models. IEEE/ACM Transactions on Computational Biology and Bioinformatics, 8(2), p 499-516.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2093578
Linke, B., Giegerich, R., & Goesmann, A., 2011. Conveyor: a workflow engine for bioinformatic analyses. Bioinformatics, 27(7), p 903-911.
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2010 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1893988 OA
Grond, F., et al., 2010. Browsing RNA Structures by Interactive Sonification. In R. Bresin, T. Hermann, & A. Hunt, eds. Proceedings of the 3rd Interactive Sonification Workshop. KTH, Stockholm, Sweden: KTH School of Computer Science and Communication (CSC), pp. 11-16.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2906810
Bremges, A., Schirmer, S., & Giegerich, R., 2010. Fine-tuning structural RNA alignments in the twilight zone. BMC Bioinformatics, 11(1): 222.
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2010 | Bielefelder E-Dissertation | PUB-ID: 2304195 OA
Sauthoff, G., 01T00:00:00Z.01.1970 Bellman's GAP : a 2nd generation language and system for algebraic dynamic programming, Bielefeld (Germany): Bielefeld University.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1796697
Brabrand, C., Giegerich, R., & Moller, A., 2010. Analyzing ambiguity of context-free grammars. SCIENCE OF COMPUTER PROGRAMMING, 75(3), p 176-191.
PUB | DOI | WoS
 
2010 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1894008 OA
Theis, C., Janssen, S., & Giegerich, R., 2010. Prediction of RNA Secondary Structure Including Kissing Hairpin Motifs. In V. Moulton & M. Singh, eds. Algorithms in Bioinformatics. 10th international workshop (WABI 2010), proceedings. Lecture Notes in Bioinformatics. no.6293 Berlin: Springer, pp. 52-64.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1893946 OA
Janssen, S., & Giegerich, R., 2010. Faster computation of exact RNA shape probabilities. Bioinformatics, 26(5), p 632-639.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785497 OA
Schlüter, J.-P., et al., 2010. A genome-wide survey of sRNAs in the symbiotic nitrogen-fixing alpha-proteobacterium Sinorhizobium meliloti. BMC Genomics, 11(1): 245.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785512 OA
Bremges, A., Schirmer, S., & Giegerich, R., 2010. Fine-tuning structural RNA alignments in the twilight zone. BMC Bioinformatics, 11(1), p 222.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785581 OA
Abouelhoda, M., El-Kalioby, M., & Giegerich, R., 2010. WAMI: a web server for the analysis of minisatellite maps. BMC Evolutionary Biology, 10(1), p 167.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2383365
Abouelhoda, M., et al., 2009. Alignment of minisatellite maps based on run-length encoding scheme. Journal of Bioinformatics and Computational Biology, 7(02), p 287-308.
PUB | DOI | PubMed | Europe PMC
 
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2383411
Reeder, J., & Giegerich, R., 2009. RNA secondary structure analysis using the RNAshapes package. Current Protocols in Bioinformatics.
PUB | DOI | PubMed | Europe PMC
 
2009 | Konferenzbeitrag | Entwurf | PUB-ID: 2383425
Steffen, P., Giegerich, R., & Giraud, M., Unpublished. GPU Parallization of Algebraic Dynamic Programming. In Proceedings PPAM.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1589458
Beckstette, M., et al., 2009. Significant speedup of database searches with HMMs by search space reduction with PSSM family models. Bioinformatics, 25(24), p 3251-3258.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1634374
Homann, R., et al., 2009. mkESA: enhanced suffix array construction tool. Bioinformatics, 25(8), p 1084-1085.
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2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2383382
Abouelhoda, M.I., et al., 2008. Alignment of Minisatellite Maps: A Minimum Spanning Tree based Approach. In Proceedings of the 6th Asia-Pacific Bioinformatics Conference. Series on Advances in Bioinformatics and Computational Biology, 6. pp. 261-272.
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2008 | Bielefelder E-Dissertation | PUB-ID: 2305281 OA
Fiedler, T., 01T00:00:00Z.01.1970 The jPREdictor and its application to motif discovery, motif clustering and the prediction of Polycomb/Trithorax response elements, Bielefeld (Germany): Bielefeld University.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1784020 OA
Lamprecht, A.-L., et al., 2008. GeneFisher-P: variations of GeneFisher as processes in Bio-jETI. BMC Bioinformatics, 9(Suppl 4), p S13.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1784025 OA
Herold, J., Kurtz, S., & Giegerich, R., 2008. Efficient computation of absent words in genomic sequences. BMC Bioinformatics, 9(1), p 167.
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