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136 Publikationen

2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2003355
R. Giegerich, and C. Hoener Zu Siederdissen, “Semantics and Ambiguity of Stochastic RNA Family Models”, IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2011, 8, 499-516.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2093578
B. Linke, R. Giegerich, and A. Goesmann, “Conveyor: a workflow engine for bioinformatic analyses”, Bioinformatics, 2011, 27, 903-911.
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2010 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1893988 OA
F. Grond, S. Janssen, S. Schirmer, and T. Hermann, in Proceedings of the 3rd Interactive Sonification Workshop (Eds.: R. Bresin, T. Hermann, A. Hunt), Kth School Of Computer Science And Communication (Csc), KTH, Stockholm, Sweden, 2010, p. 11-16.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2906810
A. Bremges, S. Schirmer, and R. Giegerich, “Fine-tuning structural RNA alignments in the twilight zone”, BMC Bioinformatics, 2010, 11, : 222.
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2010 | Bielefelder E-Dissertation | PUB-ID: 2304195 OA
G. Sauthoff, Bellman's GAP : a 2nd generation language and system for algebraic dynamic programming, Bielefeld University, Bielefeld (Germany), 01T00:00:00Z.01.1970.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1796697
C. Brabrand, R. Giegerich, and A. Moller, “Analyzing ambiguity of context-free grammars”, SCIENCE OF COMPUTER PROGRAMMING, 2010, 75, 176-191.
PUB | DOI | WoS
 
2010 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1894008 OA
C. Theis, S. Janssen, and R. Giegerich, in Algorithms in Bioinformatics. 10th international workshop (WABI 2010), proceedings (Eds.: V. Moulton, M. Singh), Springer, Berlin, 2010, p. 52-64.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1893946 OA
S. Janssen, and R. Giegerich, “Faster computation of exact RNA shape probabilities”, Bioinformatics, 2010, 26, 632-639.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785497 OA
J. - P. Schlüter, J. Reinkensmeier, S. Daschkey, E. Evguenieva-Hackenberg, S. Janssen, S. Jaenicke, J. D. Becker, R. Giegerich, and A. Becker, “A genome-wide survey of sRNAs in the symbiotic nitrogen-fixing alpha-proteobacterium Sinorhizobium meliloti”, BMC Genomics, 2010, 11, : 245.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785512 OA
A. Bremges, S. Schirmer, and R. Giegerich, “Fine-tuning structural RNA alignments in the twilight zone”, BMC Bioinformatics, 2010, 11, 222.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785581 OA
M. Abouelhoda, M. El-Kalioby, and R. Giegerich, “WAMI: a web server for the analysis of minisatellite maps”, BMC Evolutionary Biology, 2010, 10, 167.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2383365
M. Abouelhoda, R. Giegerich, B. Behzadi, and J. M. Steyaert, “Alignment of minisatellite maps based on run-length encoding scheme”, Journal of Bioinformatics and Computational Biology, 2009, 7, 287-308.
PUB | DOI | PubMed | Europe PMC
 
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2383411
J. Reeder, and R. Giegerich, “RNA secondary structure analysis using the RNAshapes package”, Current Protocols in Bioinformatics, 2009.
PUB | DOI | PubMed | Europe PMC
 
2009 | Konferenzbeitrag | Entwurf | PUB-ID: 2383425
P. Steffen, R. Giegerich, and M. Giraud, in Proceedings PPAM, Unpublished.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1589458
M. Beckstette, R. Homann, R. Giegerich, and S. Kurtz, “Significant speedup of database searches with HMMs by search space reduction with PSSM family models”, Bioinformatics, 2009, 25, 3251-3258.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1634374
R. Homann, D. Fleer, R. Giegerich, and M. Rehmsmeier, “mkESA: enhanced suffix array construction tool”, Bioinformatics, 2009, 25, 1084-1085.
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2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2383382
M. I. Abouelhoda, R. Giegerich, B. Behzadi, and J. M. Steyaert, in Proceedings of the 6th Asia-Pacific Bioinformatics Conference, 2008, p. 261-272.
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2008 | Bielefelder E-Dissertation | PUB-ID: 2305281 OA
T. Fiedler, The jPREdictor and its application to motif discovery, motif clustering and the prediction of Polycomb/Trithorax response elements, Bielefeld University, Bielefeld (Germany), 01T00:00:00Z.01.1970.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1784020 OA
A. - L. Lamprecht, T. Margaria, B. Steffen, A. Sczyrba, S. Hartmeier, and R. Giegerich, “GeneFisher-P: variations of GeneFisher as processes in Bio-jETI”, BMC Bioinformatics, 2008, 9, S13.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1784025 OA
J. Herold, S. Kurtz, and R. Giegerich, “Efficient computation of absent words in genomic sequences”, BMC Bioinformatics, 2008, 9, 167.
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