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76 Publikationen

2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2698163
Heins, R. A., Cheng, X., Nath, S., Deng, K., Bowen, B. P., Chivian, D. C., Datta, S., et al. (2014). Phylogenomically Guided Identification of Industrially Relevant GH1 β-Glucosidases through DNA Synthesis and Nanostructure-Initiator Mass Spectrometry. ACS chemical biology, 9(9), 2082-2091. doi:10.1021/cb500244v
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2672695
Swan, B. K., Chaffin, M. D., Martinez-Garcia, M., Morrison, H. G., Field, E. K., Poulton, N. J., Masland, E. D. P., et al. (2014). Genomic and metabolic diversity of marine group I thaumarchaeota in the mesopelagic of two subtropical gyres. PloS one, 9(4), 95380. doi:10.1371/journal.pone.0095380
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2665333
Henrich, B., Rumming, M., Sczyrba, A., Velleuer, E., Dietrich, R., Gerlach, W., Gombert, M., et al. (2014). Mycoplasma salivarium as a Dominant Coloniser of Fanconi Anaemia Associated Oral Carcinoma. PLoS ONE, 9(3), e92297. doi:10.1371/journal.pone.0092297
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2662055
Wibberg, D., Luque-Almagro, V. M., Igeño, M. I., Bremges, A., Roldán, M. D., Merchán, F., Sáez, L. P., et al. (2014). Complete genome sequence of the cyanide-degrading bacterium Pseudomonas pseudoalcaligenes CECT5344. Journal of biotechnology, 175, 67-68. doi:10.1016/j.jbiotec.2014.02.004
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2013 | Konferenzbeitrag | PUB-ID: 2909357
Gisbrecht, A., Hammer, B., Mokbel, B., & Sczyrba, A. (2013). Nonlinear dimensionality reduction for cluster identification in metagenomic samples. IV, 174-179.
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2013 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2623500
Gisbrecht, A., Hammer, B., Mokbel, B., & Sczyrba, A. (2013). Nonlinear dimensionality reduction for cluster identification in metagenomic samples. In E. Banissi (Ed.), 17th International Conference on Information Visualisation IV 2013 (pp. 174-179).
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2613567
Rinke, C., Schwientek, P., Sczyrba, A., Ivanova, N. N., Anderson, I. J., Cheng, J. - F., Darling, A., et al. (2013). Insights into the phylogeny and coding potential of microbial dark matter. Nature, 499(7459), 431-437. doi:10.1038/nature12352
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2563424
Campbell, J. H., O'Donoghue, P., Campbell, A. G., Schwientek, P., Sczyrba, A., Woyke, T., Söll, D., et al. (2013). UGA is an additional glycine codon in uncultured SR1 bacteria from the human microbiota. Proceedings of the National Academy of Sciences of the United States of America, 110(14), 5540-5545. doi:10.1073/pnas.1303090110
PUB | DOI | WoS | PubMed | Europe PMC
 
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2641352
Kamke, J., Sczyrba, A., Ivanova, N., Schwientek, P., Rinke, C., Mavromatis, K., Woyke, T., et al. (2013). Single-cell genomics reveals complex carbohydrate degradation patterns in poribacterial symbionts of marine sponges. The ISME journal, 7(12), 2287-2300. doi:10.1038/ismej.2013.111
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2638234
Zaremba-Niedzwiedzka, K., Viklund, J., Zhao, W., Ast, J., Sczyrba, A., Woyke, T., McMahon, K., et al. (2013). Single-cell genomics reveal low recombination frequencies in freshwater bacteria of the SAR11 clade. Genome biology, 14(11), R130. doi:10.1186/gb-2013-14-11-r130
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2563543
Campbell, A. G., Campbell, J. H., Schwientek, P., Woyke, T., Sczyrba, A., Allman, S., Beall, C. J., et al. (2013). Multiple Single-Cell Genomes Provide Insight into Functions of Uncultured Deltaproteobacteria in the Human Oral Cavity. PLoS ONE, 8(3), e59361. doi:10.1371/journal.pone.0059361
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2613623
Swan, B. K., Tupper, B., Sczyrba, A., Lauro, F. M., Martinez-Garcia, M., González, J. M., Luo, H., et al. (2013). Prevalent genome streamlining and latitudinal divergence of planktonic bacteria in the surface ocean. Proceedings of the National Academy of Sciences of the United States of America, 110(28), 11463-11468. doi:10.1073/pnas.1304246110
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2518330
Garcia, S. L., McMahon, K. D., Martinez-Garcia, M., Srivastava, A., Sczyrba, A., Stepanauskas, R., Grossart, H. - P., et al. (2012). Metabolic potential of a single cell belonging to one of the most abundant lineages in freshwater bacterioplankton. The ISME journal, 7(1), 137-147. doi:10.1038/ismej.2012.86
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2547307
El-Kalioby, M., Abouelhoda, M., Krüger, J., Giegerich, R., Sczyrba, A., Wall, D. P., & Tonellato, P. (2012). Personalized cloud-based bioinformatics services for research and education: use cases and the elasticHPC package. BMC Bioinformatics, 13(Suppl 17), S22. doi:10.1186/1471-2105-13-S17-S22
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2329885
Swan, B. K., Martinez-Garcia, M., Preston, C. M., Sczyrba, A., Woyke, T., Lamy, D., Reinthaler, T., et al. (2011). Potential for Chemolithoautotrophy Among Ubiquitous Bacteria Lineages in the Dark Ocean. Science, 333(6047), 1296-1300. doi:10.1126/science.1203690
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2351462
Kim, T. - W., Chokhawala, H. A., Hess, M., Dana, C. M., Baer, Z., Sczyrba, A., Rubin, E. M., et al. (2011). High-Throughput In Vitro Glycoside Hydrolase (HIGH) Screening for Enzyme Discovery. Angewandte Chemie, 123(47), 11411-11414. doi:10.1002/ange.201104685
PUB | DOI | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2789582
Sales, C. M., Mahendra, S., Grostern, A., Parales, R. E., Goodwin, L. A., Woyke, T., Nolan, M., et al. (2011). Genome sequence of the 1,4-dioxane-degrading Pseudonocardia dioxanivorans strain CB1190. Journal of Bacteriology, 193(17), 4549-4550. doi:10.1128/JB.00415-11
PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC | GenBank
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2410148
Woyke, T., Sczyrba, A., Lee, J., Rinke, C., Tighe, D., Clingenpeel, S., Malmstrom, R., et al. (2011). Decontamination of MDA Reagents for Single Cell Whole Genome Amplification. PLoS ONE, 6(10), e26161. doi:10.1371/journal.pone.0026161
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1991643
Hess, M., Sczyrba, A., Egan, R., Kim, T. W., Chokhawala, H., Schroth, G., Luo, S., et al. (2011). Metagenomic discovery of biomass-degrading genes and genomes from cow rumen. Science, 331(6016), 463-467. doi:10.1126/science.1200387
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1991615
Gilbert, J. A., Meyer, F., Antonopoulos, D., Balaji, P., Brown, C. T., Desai, N., Eisen, J. A., et al. (2010). Meeting report: the terabase metagenomics workshop and the vision of an Earth microbiome project. Stand Genomic Sci, 3(3), 243-248. doi:10.4056/sigs.1433550
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