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77 Publikationen

2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2689051
Comparative single-cell genomics reveals potential ecological niches for the freshwater acI Actinobacteria lineage
Ghylin TW, Garcia SL, Moya F, Oyserman BO, Schwientek P, Forest KT, Mutschler J, Dwulit-Smith J, Chan L-K, Martinez-Garcia M, Sczyrba A, et al. (2014)
The ISME Journal 8(12): 2503-2516.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2698163
Phylogenomically Guided Identification of Industrially Relevant GH1 β-Glucosidases through DNA Synthesis and Nanostructure-Initiator Mass Spectrometry
Heins RA, Cheng X, Nath S, Deng K, Bowen BP, Chivian DC, Datta S, Friedland GD, D'Haeseleer P, Wu D, Tran-Gyamfi M, et al. (2014)
ACS chemical biology 9(9): 2082-2091.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2672695
Genomic and metabolic diversity of marine group I thaumarchaeota in the mesopelagic of two subtropical gyres
Swan BK, Chaffin MD, Martinez-Garcia M, Morrison HG, Field EK, Poulton NJ, Masland EDP, Harris CC, Sczyrba A, Chain PSG, Koren S, et al. (2014)
PloS one 9(4): 95380: e95380.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2665333
Mycoplasma salivarium as a Dominant Coloniser of Fanconi Anaemia Associated Oral Carcinoma
Henrich B, Rumming M, Sczyrba A, Velleuer E, Dietrich R, Gerlach W, Gombert M, Rahn S, Stoye J, Borkhardt A, Fischer U (2014)
PLoS ONE 9(3): e92297: e92297.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2662055
Complete genome sequence of the cyanide-degrading bacterium Pseudomonas pseudoalcaligenes CECT5344
Wibberg D, Luque-Almagro VM, Igeño MI, Bremges A, Roldán MD, Merchán F, Sáez LP, Guijo MI, Manso MI, Macías D, Cabello P, et al. (2014)
Journal of biotechnology 175: 67-68.
PUB | DOI | WoS | PubMed | Europe PMC
 
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2563543
Multiple Single-Cell Genomes Provide Insight into Functions of Uncultured Deltaproteobacteria in the Human Oral Cavity
Campbell AG, Campbell JH, Schwientek P, Woyke T, Sczyrba A, Allman S, Beall CJ, Griffen A, Leys E, Podar M (2013)
PLoS ONE 8(3): e59361: e59361.
PUB | DOI | WoS | PubMed | Europe PMC
 
2013 | Konferenzbeitrag | PUB-ID: 2909357
Nonlinear dimensionality reduction for cluster identification in metagenomic samples
Gisbrecht A, Hammer B, Mokbel B, Sczyrba A (2013)
In: IV. 174-179.
PUB
 
2013 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2623500
Nonlinear dimensionality reduction for cluster identification in metagenomic samples
Gisbrecht A, Hammer B, Mokbel B, Sczyrba A (2013)
In: 17th International Conference on Information Visualisation IV 2013. Banissi E (Ed); 174-179.
PUB
 
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2613567
Insights into the phylogeny and coding potential of microbial dark matter
Rinke C, Schwientek P, Sczyrba A, Ivanova NN, Anderson IJ, Cheng J-F, Darling A, Malfatti S, Swan BK, Gies EA, Dodsworth JA, et al. (2013)
Nature 499(7459): 431-437.
PUB | DOI | WoS | PubMed | Europe PMC
 
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2563424
UGA is an additional glycine codon in uncultured SR1 bacteria from the human microbiota
Campbell JH, O'Donoghue P, Campbell AG, Schwientek P, Sczyrba A, Woyke T, Söll D, Podar M (2013)
Proceedings of the National Academy of Sciences of the United States of America 110(14): 5540-5545.
PUB | DOI | WoS | PubMed | Europe PMC
 
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2641352
Single-cell genomics reveals complex carbohydrate degradation patterns in poribacterial symbionts of marine sponges
Kamke J, Sczyrba A, Ivanova N, Schwientek P, Rinke C, Mavromatis K, Woyke T, Hentschel U (2013)
The ISME journal 7(12): 2287-2300.
PUB | DOI | WoS | PubMed | Europe PMC
 
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2638234
Single-cell genomics reveal low recombination frequencies in freshwater bacteria of the SAR11 clade
Zaremba-Niedzwiedzka K, Viklund J, Zhao W, Ast J, Sczyrba A, Woyke T, McMahon K, Bertilsson S, Stepanauskas R, Andersson SG (2013)
Genome biology 14(11): R130: R130.
PUB | DOI | WoS | PubMed | Europe PMC
 
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2613623
Prevalent genome streamlining and latitudinal divergence of planktonic bacteria in the surface ocean
Swan BK, Tupper B, Sczyrba A, Lauro FM, Martinez-Garcia M, González JM, Luo H, Wright JJ, Landry ZC, Hanson NW, Thompson BP, et al. (2013)
Proceedings of the National Academy of Sciences of the United States of America 110(28): 11463-11468.
PUB | DOI | WoS | PubMed | Europe PMC
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2518330
Metabolic potential of a single cell belonging to one of the most abundant lineages in freshwater bacterioplankton
Garcia SL, McMahon KD, Martinez-Garcia M, Srivastava A, Sczyrba A, Stepanauskas R, Grossart H-P, Woyke T, Warnecke F (2012)
The ISME journal 7(1): 137-147.
PUB | DOI | WoS | PubMed | Europe PMC
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2547307
Personalized cloud-based bioinformatics services for research and education: use cases and the elasticHPC package
El-Kalioby M, Abouelhoda M, Krüger J, Giegerich R, Sczyrba A, Wall DP, Tonellato P (2012)
BMC Bioinformatics 13(Suppl 17): S22: S22.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2329885
Potential for Chemolithoautotrophy Among Ubiquitous Bacteria Lineages in the Dark Ocean
Swan BK, Martinez-Garcia M, Preston CM, Sczyrba A, Woyke T, Lamy D, Reinthaler T, Poulton NJ, Masland EDP, Gomez ML, Sieracki ME, et al. (2011)
Science 333(6047): 1296-1300.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2351462
High-Throughput In Vitro Glycoside Hydrolase (HIGH) Screening for Enzyme Discovery
Kim T-W, Chokhawala HA, Hess M, Dana CM, Baer Z, Sczyrba A, Rubin EM, Blanch HW, Clark DS (2011)
Angewandte Chemie 123(47): 11411-11414.
PUB | DOI | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2789582
Genome sequence of the 1,4-dioxane-degrading Pseudonocardia dioxanivorans strain CB1190
Sales CM, Mahendra S, Grostern A, Parales RE, Goodwin LA, Woyke T, Nolan M, Lapidus A, Chertkov O, Ovchinnikova G, Sczyrba A, et al. (2011)
Journal of Bacteriology 193(17): 4549-4550.
PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC | GenBank
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2410148
Decontamination of MDA Reagents for Single Cell Whole Genome Amplification
Woyke T, Sczyrba A, Lee J, Rinke C, Tighe D, Clingenpeel S, Malmstrom R, Stepanauskas R, Cheng J-F (2011)
PLoS ONE 6(10): e26161: e26161.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1991643
Metagenomic discovery of biomass-degrading genes and genomes from cow rumen
Hess M, Sczyrba A, Egan R, Kim TW, Chokhawala H, Schroth G, Luo S, Clark DS, Chen F, Zhang T, Mackie RI, et al. (2011)
Science 331(6016): 463-467.
PUB | DOI | WoS | PubMed | Europe PMC
 

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