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543 Publikationen

2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936439
Schaffert, L., März, C., Burkhardt, L., Droste, J., Brandt, D., Busche, T., Rosen, W., Schneiker-Bekel, S., Persicke, M., Pühler, A. & Kalinowski, J. (2019). Evaluation of vector systems and promoters for overexpression of the acarbose biosynthesis gene acbC in Actinoplanes sp. SE50/110. Microbial Cell Factories, 18: 114. Springer Nature. doi:10.1186/s12934-019-1162-5.
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936223
Belmann, P., Fischer, B., Krüger, J., Procházka, M., Rasche, H., Prinz, M., Hanussek, M., Lang, M., Bartusch, F., Gläßle, B., Krüger, J., Pühler, A. & Sczyrba, A. (2019). de.NBI Cloud federation through ELIXIR AAI. F1000Research, 8: 842. F1000 Research Ltd. doi:10.12688/f1000research.19013.1.
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2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2934570
Castellani, L.G., Nilsson, J.F., Wibberg, D., Schlüter, A., Pühler, A., Brom, S., Pistorio, M. & Tejerizo, G.T. (2019). Insight into the structure, function and conjugative transfer of pLPU83a, an accessory plasmid of Rhizobium favelukesii LPU83. Plasmid. Elsevier BV. doi:10.1016/j.plasmid.2019.03.004.
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935923
Nelkner, J., Henke, C., Lin, T.W., Pätzold, W., Hassa, J., Jaenicke, S., Grosch, R., Pühler, A., Sczyrba, A. & Schlüter, A. (2019). Effect of Long-Term Farming Practices on Agricultural Soil Microbiome Members Represented by Metagenomically Assembled Genomes (MAGs) and Their Predicted Plant-Beneficial Genes. Genes, 10(6): 424. MDPI. doi:10.3390/genes10060424.
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935899
López, J.L., Lozano, M.J., Lagares, A., Fabre, M.L., Draghi, W.O., Del Papa, M.F., Pistorio, M., Becker, A., Wibberg, D., Schlüter, A., Pühler, A., Blom, J., Goesmann, A. & Lagares, A. (2019). Codon Usage Heterogeneity in the Multipartite Prokaryote Genome. Selection-Based Coding Bias Associated with Gene Location, Expression Level, and Ancestry. mBio, 10(3): e00505-19. American Society for Microbiology. doi:10.1128/mbio.00505-19.
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935556
Verwaaijen, B., Wibberg, D., Winkler, A., Zrenner, R., Bednarz, H., Niehaus, K., Grosch, R., Pühler, A. & Schlüter, A. (2019). A comprehensive analysis of the Lactuca sativa, L. transcriptome during different stages of the compatible interaction with Rhizoctonia solani. Scientific Reports, 9: 7221. Springer Nature. doi:10.1038/s41598-019-43706-5.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920160
Arnold, W., Grotjohann, N., Pühler, A., Röllke, K. & Selbitschka, W. (2018). Die CeBiT ec Schülerakademie „Synthetische Biologie/Biotechnologie “– Begabtenförderung in einem zukunftsträchtigen Forschungsfeld. ABB-Information. Jahresheft, 2017. Arbeitskreis Begabungsforschung und Begabungsförderung.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2916929
Stolze, Y., Bremges, A., Maus, I., Pühler, A., Sczyrba, A. & Schlüter, A. (2018). Targeted in situ metatranscriptomics for selected taxa from mesophilic and thermophilic biogas plants. Microbial Biotechnology, 11(4), 667-679. Wiley-Blackwell. doi:10.1111/1751-7915.12982.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920169
Salto, I.P., Torres Tejerizo, G., Wibberg, D., Pühler, A., Schlüter, A. & Pistorio, M. (2018). Comparative genomic analysis of Acinetobacter spp. plasmids originating from clinical settings and environmental habitats. Scientific Reports, 8(1): 7783. Springer Nature. doi:10.1038/s41598-018-26180-3.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920170
Hassa, J., Maus, I., Off, S., Pühler, A., Scherer, P., Klocke, M. & Schlüter, A. (2018). Metagenome, metatranscriptome, and metaproteome approaches unraveled compositions and functional relationships of microbial communities residing in biogas plants. Applied Microbiology and Biotechnology, 102(12), 5045-5063. Springer Nature. doi:10.1007/s00253-018-8976-7.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920168
Tomazetto, G., Hahnke, S., Wibberg, D., Pühler, A., Klocke, M. & Schlüter, A. (2018). Proteiniphilum saccharofermentans str. M3/6 T isolated from a laboratory biogas reactor is versatile in polysaccharide and oligopeptide utilization as deduced from genome-based metabolic reconstructions. Biotechnology Reports, 18: e00254. Elsevier BV. doi:10.1016/j.btre.2018.e00254.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2930510
Alkhateeb, R., Vorhölter, F.-J., Steffens, T., Rückert, C., Ortseifen, V., Hublik, G., Niehaus, K. & Pühler, A. (2018). Comparative transcription profiling of two fermentation cultures of Xanthomonas campestris pv. campestris B100 sampled in the growth and in the stationary phase. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, 102(15), 6613-6625. Springer. doi:10.1007/s00253-018-9106-2.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920750
Maus, I., Rumming, M., Bergmann, I., Heeg, K., Pohl, M., Nettmann, E., Jaenicke, S., Blom, J., Pühler, A., Schlüter, A., Sczyrba, A. & Klocke, M. (2018). Characterization of Bathyarchaeota genomes assembled from metagenomes of biofilms residing in mesophilic and thermophilic biogas reactors. Biotechnology for Biofuels, 11: 167. Springer Nature. doi:10.1186/s13068-018-1162-4.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920173
Wibberg, D., Salto, I.P., Eikmeyer, F.G., Maus, I., Winkler, A., Nordmann, P., Pühler, A., Poirel, L. & Schlüter, A. (2018). Complete Genome Sequencing of Acinetobacter baumannii Strain K50 Discloses the Large Conjugative Plasmid pK50a Encoding Carbapenemase OXA-23 and Extended-Spectrum β-Lactamase GES-11. Antimicrobial Agents and Chemotherapy, 62(5): e00212-18. American Society for Microbiology. doi:10.1128/aac.00212-18.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2917037
Verwaaijen, B., Wibberg, D., Nelkner, J., Gordin, M., Rupp, O., Winkler, A., Bremges, A., Blom, J., Grosch, R., Pühler, A. & Schlüter, A. (2018). Assembly of the Lactuca sativa, L. cv. Tizian draft genome sequence reveals differences within major resistance complex 1 as compared to the cv. Salinas reference genome. JOURNAL OF BIOTECHNOLOGY, 267, 12-18. Elsevier Science Bv. doi:10.1016/j.jbiotec.2017.12.021.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2908419
Torres Tejerizo, G.A., Wibberg, D., Winkler, A., Ormeño-Orrillo, E., Martínez-Romero, E., Niehaus, K., Pühler, A., Kalinowski, J., Lagares, A., Schlüter, A. & Pistorio, M. (2017). Genome Sequence of the Symbiotic Type Strain Rhizobium tibeticum CCBAU85039T. Genome Announcements, 5(4), e01513-16. American Society for Microbiology. doi:10.1128/genomea.01513-16.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2912114
Verwaaijen, B., Wibberg, D., Kröber, M., Winkler, A., Zrenner, R., Bednarz, H., Niehaus, K., Grosch, R., Pühler, A. & Schlüter, A. (2017). The Rhizoctonia solani AG1-IB (isolate 7/3/14) transcriptome during interaction with the host plant lettuce (Lactuca sativa L.). PLOS ONE, 12(5): e0177278. Public Library of Science (PLoS). doi:10.1371/journal.pone.0177278.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2913116
Wolf, T., Droste, J., Gren, T., Ortseifen, V., Schneiker-Bekel, S., Zemke, T., Pühler, A. & Kalinowski, J. (2017). The MalR type regulator AcrC is a transcriptional repressor of acarbose biosynthetic genes in Actinoplanes sp. SE50/110. BMC Genomics, 18: 562. Springer Nature. doi:10.1186/s12864-017-3941-x.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2915516
Maus, I., Bremges, A., Stolze, Y., Hahnke, S., Cibis, K.G., Koeck, D.E., Kim, Y.S., Kreubel, J., Hassa, J., Wibberg, D., Weimann, A., Off, S., Stantscheff, R., Zverlov, V.V., Schwarz, W.H., König, H., Liebl, W., Scherer, P., McHardy, A.C., Sczyrba, A., Klocke, M., Pühler, A. & Schlüter, A. (2017). Genomics and prevalence of bacterial and archaeal isolates from biogas-producing microbiomes. Biotechnology for Biofuels, 10(1): 264. Springer Nature. doi:10.1186/s13068-017-0947-1.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2910369
Maus, I., Kim, Y.S., Wibberg, D., Stolze, Y., Off, S., Antonczyk, S., Pühler, A., Scherer, P. & Schlüter, A. (2017). Biphasic Study to Characterize Agricultural Biogas Plants by High-Throughput 16S rRNA Gene Amplicon Sequencing and Microscopic Analysis. Journal of Microbiology and Biotechnology, 27(2), 321-334. Korean Soc Microbiology & Biotechnology. doi:10.4014/jmb.1605.05083.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2916528
Wolf, T., Schneiker-Bekel, S., Neshat, A., Ortseifen, V., Wibberg, D., Zemke, T., Pühler, A. & Kalinowski, J. (2017). Genome improvement of the acarbose producer Actinoplanes sp SE50/110 and annotation refinement based on RNA-seq analysis. JOURNAL OF BIOTECHNOLOGY, 251, 112-123. Elsevier Science Bv. doi:10.1016/j.jbiotec.2017.04.013.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911997
Omar Draghi, W., Florencia Del Papa, M., Barsch, A., Albicoro, F.J., Lozano, M.J., Pühler, A., Niehaus, K. & Lagares, A. (2017). A metabolomic approach to characterize the acid-tolerance response in Sinorhizobium meliloti. METABOLOMICS, 13(6): 71. Springer. doi:10.1007/s11306-017-1210-2.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2916470
Tomazetto, G., Hahnke, S., Langer, T., Wibberg, D., Blom, J., Maus, I., Pühler, A., Klocke, M. & Schlüter, A. (2017). The completely annotated genome and comparative genomics of the Peptoniphilaceae bacterium str. ING2-D1G, a novel acidogenic bacterium isolated from a mesophilic biogas reactor. Journal of Biotechnology, 257, 178-186. Elsevier Science Bv. doi:10.1016/j.jbiotec.2017.05.027.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2910373
Bartholomäus, A., Wibberg, D., Winkler, A., Pühler, A., Schlüter, A. & Varrelmann, M. (2017). Identification of a novel mycovirus isolated from Rhizoctonia solani (AG 2-2 IV) provides further information about genome plasticity within the order Tymovirales. Archives of Virology, 162(2), 555-559. Springer Wien. doi:10.1007/s00705-016-3085-3.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2916406
Lasek, R., Dziewit, L., Ciok, A., Decewicz, P., Romaniuk, K., Jedrys, Z., Wibberg, D., Schlüter, A., Pühler, A. & Bartosik, D. (2017). Genome content, metabolic pathways and biotechnological potential of the psychrophilic Arctic bacterium Psychrobacter sp DAB_AL43B, a source and a host of novel Psychrobacter-specific vectors. Journal of Biotechnology, 263, 64-74. Elsevier Science Bv. doi:10.1016/j.jbiotec.2017.09.011.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2916435
Czarnecki, J., Dziewit, L., Puzyna, M., Prochwicz, E., Tudek, A., Wibberg, D., Schlüter, A., Pühler, A. & Bartosik, D. (2017). Lifestyle-determining extrachromosomal replicon pAMV1 and its contribution to the carbon metabolism of the methylotrophic bacterium Paracoccus aminovorans JCM 7685. Environmental Microbiology, 19(11), 4536-4550. Wiley. doi:10.1111/1462-2920.13901.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2914538
Ortseifen, V., Kalinowski, J., Pühler, A. & Rückert, C. (2017). The complete genome sequence of the actinobacterium Streptomyces glaucescens GLA.O (DSM 40922) carrying gene clusters for the biosynthesis of tetracenomycin C, 5`-hydroxy streptomycin, and acarbose. J Biotechnol, 262, 84-88. doi:10.1016/j.jbiotec.2017.09.008.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2916490
Wibberg, D., Genzel, F., Verwaaijen, B., Blom, J., Rupp, O., Goesmann, A., Zrenner, R., Grosch, R., Pühler, A. & Schlüter, A. (2017). Draft genome sequence of the potato pathogen Rhizoctonia solani AG3-PT isolate Ben3. Archives of Microbiology, 199(7), 1065-1068. Springer. doi:10.1007/s00203-017-1394-x.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911777
Torres Tejerizo, G.A., Kim, Y.S., Maus, I., Wibberg, D., Winkler, A., Off, S., Pühler, A., Scherer, P. & Schlüter, A. (2017). Genome sequence of Methanobacterium congolense strain Buetzberg, a hydrogenotrophic, methanogenic archaeon, isolated from a mesophilic industrial-scale biogas plant utilizing bio-waste. Journal of Biotechnology, 247, 1-5. Elsevier Science Bv. doi:10.1016/j.jbiotec.2017.02.015.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911462
Alkhateeb, R., Rückert, C., Rupp, O., Pucker, B., Hublik, G., Wibberg, D., Niehaus, K., Pühler, A. & Vorhölter, F.-J. (2017). Refined annotation of the complete genome of the phytopathogenic and xanthan producing Xanthomonas campestris pv. campestris strain B100 based on RNA sequence data. Journal of Biotechnology, 253, 55-61. Elsevier BV. doi:10.1016/j.jbiotec.2017.05.009.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904970
Maus, I., Wibberg, D., Winkler, A., Pühler, A., Schnürer, A. & Schlüter, A. (2016). Complete Genome Sequence of the MethanogenMethanoculleus bourgensisBA1 Isolated from a Biogas Reactor. Genome Announcements, 4(3): e00568-16. American Society for Microbiology. doi:10.1128/genomea.00568-16.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907676
Jaenicke, S., Bunk, B., Wibberg, D., Spröer, C., Hersemann, L., Blom, J., Winkler, A., Schatschneider, S., Albaum, S., Kölliker, R., Goesmann, A., Pühler, A., Overmann, J. & Vorhölter, F.-J. (2016). Complete Genome Sequence of the Barley Pathogen Xanthomonas translucens pv. translucens DSM 18974 T (ATCC 19319 T). Genome Announcements, 4(6): e01334-16. American Society for Microbiology. doi:10.1128/genomea.01334-16.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904978
Koeck, D.E., Maus, I., Wibberg, D., Winkler, A., Zverlov, V.V., Liebl, W., Pühler, A., Schwarz, W.H. & Schlüter, A. (2016). Draft Genome Sequence of Propionisporasp. Strain 2/2-37, a New Xylan-Degrading Bacterium Isolated from a Mesophilic Biogas Reactor. Genome Announcements, 4(3), e00609-16. American Society for Microbiology. doi:10.1128/genomea.00609-16.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904993
Koeck, D.E., Maus, I., Wibberg, D., Winkler, A., Zverlov, V.V., Liebl, W., Pühler, A., Schwarz, W.H. & Schlüter, A. (2016). Complete Genome Sequence of Herbinix luporumSD1D, a New Cellulose-Degrading Bacterium Isolated from a Thermophilic Biogas Reactor. Genome Announcements, 4(4), e00687-16. American Society for Microbiology. doi:10.1128/genomea.00687-16.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907431
Bartholomaeus, A., Wibberg, D., Winkler, A., Pühler, A., Schlüter, A. & Varrelmann, M. (2016). Deep Sequencing Analysis Reveals the Mycoviral Diversity of the Virome of an Avirulent Isolate of Rhizoctonia solani AG-2-2 IV. PLOS ONE, 11(11): e0165965. Public Library Science. doi:10.1371/journal.pone.0165965.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904815
Stolze, Y., Bremges, A., Rumming, M., Henke, C., Maus, I., Pühler, A., Sczyrba, A. & Schlüter, A. (2016). Identification and genome reconstruction of abundant distinct taxa in microbiomes from one thermophilic and three mesophilic production-scale biogas plants. Biotechnology for Biofuels, 9: 156. Springer Nature. doi:10.1186/s13068-016-0565-3.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903660
Steffens, T., Vorhölter, F.-J., Giampa, M., Hublik, G., Pühler, A. & Niehaus, K. (2016). The influence of a modified lipopolysaccharide O-antigen on the biosynthesis of xanthan in Xanthomonas campestris pv. campestris B100. BMC Microbiology, 16: 93. Biomed Central. doi:10.1186/s12866-016-0710-y.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2917144
Wibberg, D., Andersson, L., Tzelepis, G., Rupp, O., Blom, J., Jelonek, L., Pühler, A., Fogelqvist, J., Varrelmann, M., Schlüter, A. & Dixelius, C. (2016). Genome analysis of the sugar beet pathogen Rhizoctonia solani AG2-2IIIB revealed high numbers in secreted proteins and cell wall degrading enzymes. BMC Genomics, 17: 245. Springer Nature. doi:10.1186/s12864-016-2561-1.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2906715
Koeck, D.E., Wibberg, D., Maus, I., Winkler, A., Albersmeier, A., Zverlov, V.V., Liebl, W., Pühler, A., Schwarz, W.H. & Schlüter, A. (2016). Corrigendum to "Complete genome sequence of the cellulolytic thermophile Ruminoclostridium cellulosi wild-type strain DG5 isolated from a thermophilic biogas plant (J. Biotechnol. 188 (2014) 136–137)")". Journal of Biotechnology, 237, 35. Elsevier Science Bv. doi:10.1016/j.jbiotec.2016.08.020.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905630
Gren, T., Ortseifen, V., Wibberg, D., Schneiker-Bekel, S., Bednarz, H., Niehaus, K., Zemke, T., Persicke, M., Pühler, A. & Kalinowski, J. (2016). Genetic engineering in Actinoplanes sp SE50/110-development of an intergeneric conjugation system for the introduction of actinophage-based integrative vectors. Journal of Biotechnology, 232, 79-88. Gehalten auf der 10th CeBiTec Symposium on Bioinformatics for Biotechnology and Biomedicine, Elsevier Science BV. doi:10.1016/j.jbiotec.2016.05.012.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2908260
Torres Tejerizo, G.A., Antonio Rogel, M., Ormeno-Orrillo, E., Julia Althabegoiti, M., Fernanda Nilsson, J., Niehaus, K., Schlüter, A., Pühler, A., Florencia Del Papa, M., Lagares, A., Martinez-Romero, E. & Pistorio, M. (2016). Rhizobium favelukesii sp nov., isolated from the root nodules of alfalfa (Medicago sativa L). INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 66, 4451-4457. Microbiology Soc. doi:10.1099/ijsem.0.001373.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905122
Draghi, W.O., Del Papa, M.F., Hellweg, C., Watt, S.A., Watt, T.F., Barsch, A., Lozano, M.J., Lagares, A., J., Salas, M.E., Lopez, J.L., Albicoro, F.J., Nilsson, J.F., Torres Tejerizo, G.A., Luna, M.F., Pistorio, M., Boiardi, J.L., Pühler, A., Weidner, S., Niehaus, K. & Lagares, A. (2016). A consolidated analysis of the physiologic and molecular responses induced under acid stress in the legume-symbiont model-soil bacterium Sinorhizobium meliloti. SCIENTIFIC REPORTS, 6: 29278. Nature Publishing Group.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2917142
Wibberg, D., Andersson, L., Rupp, O., Goesmann, A., Pühler, A., Varrelmann, M., Dixelius, C. & Schlüter, A. (2016). Draft genome sequence of the sugar beet pathogen Rhizoctonia solani AG2-2IIIB strain BBA69670. Journal of Biotechnology, 222, 11-12. Elsevier Science BV. doi:10.1016/j.jbiotec.2016.02.001.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904691
Martini, M.C., Wibberg, D., Lozano, M., Torres Tejerizo, G., Albicoro, F.J., Jaenicke, S., van Elsas, J.D., Petroni, A., Garcillan-Barcia, M.P., de la Cruz, F., Schlüter, A., Pühler, A., Pistorio, M., Lagares, A. & Del Papa, M.F. (2016). Genomics of high molecular weight plasmids isolated from an on-farm biopurification system. Scientific Reports, 6: 28284. Nature Publishing Group. doi:10.1038/srep28284.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903489
Maus, I., Cibis, K.G., Bremges, A., Stolze, Y., Wibberg, D., Tomazetto, G., Blom, J., Sczyrba, A., König, H., Pühler, A. & Schlüter, A. (2016). Genomic characterization of Defluviitoga tunisiensis L3, a key hydrolytic bacterium in a thermophilic biogas plant and its abundance as determined by metagenome fragment recruitment. Journal of Biotechnology, 232, 50-60. Elsevier BV. doi:10.1016/j.jbiotec.2016.05.001.
PUB | DOI | WoS | PubMed | Europe PMC
 
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903302
Wibberg, D., Bremges, A., Dammann-Kalinowski, T., Maus, I., Igeño, M.I., Vogelsang, R., König, C., Luque-Almagro, V.M., Roldán, M.D., Sczyrba, A., Moreno-Vivián, C., Blasco, R., Pühler, A. & Schlüter, A. (2016). Finished genome sequence and methylome of the cyanide-degrading Pseudomonas pseudoalcaligenes strain CECT5344 as resolved by single-molecule real-time sequencing. Journal of Biotechnology, 232, 61-68. Elsevier BV. doi:10.1016/j.jbiotec.2016.04.008.
PUB | DOI | WoS | PubMed | Europe PMC
 
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2902126
Liebe, S., Wibberg, D., Winkler, A., Pühler, A., Schlüter, A. & Varrelmann, M. (2016). Taxonomic analysis of the microbial community in stored sugar beets using high-throughput sequencing of different marker genes. FEMS Microbiology Ecology, 92(2): fiw004. Oxford Univ Press. doi:10.1093/femsec/fiw004.
PUB | DOI | WoS | PubMed | Europe PMC
 
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905505
Wolf, T., Gren, T., Thieme, E., Wibberg, D., Zemke, T., Pühler, A. & Kalinowski, J. (2016). Targeted genome editing in the rare actinomycete Actinoplanes sp SE50/110 by using the CRISPR/Cas9 System. Journal of Biotechnology, 231, 122-128. Elsevier Science Bv. doi:10.1016/j.jbiotec.2016.05.039.
PUB | DOI | WoS | PubMed | Europe PMC
 
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901243
Wendler, S., Otto, A., Ortseifen, V., Bonn, F., Neshat, A., Schneiker-Bekel, S., Wolf, T., Zemke, T., Wehmeier, U.F., Hecker, M., Kalinowski, J., Becher, D. & Pühler, A. (2016). Comparative proteome analysis of Actinoplanes sp SE50/110 grown with maltose or glucose shows Minor differences for acarbose biosynthesis proteins but major differences for saccharide transporters. Journal of Proteomics, 131, 140-148. Elsevier Science BV. doi:10.1016/j.jprot.2015.10.023.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2900928
Nesme, J., Achouak, W., Agathos, S., Bailey, M., Baldrian, P., Brunel, D., Frostegard, A., Heulin, T., Jansson, J.K., Jurkevitch, E., Kowalchuk, G.A., Kruus, K.L., Lagares, A., Lapin-Scott, H.M., Le Paslier, D., ic-Mulec, I., Murrell, C., Myrold, D.D., Nalin, R., Nannipieri, P., Neufeld, J.D., O'Gara, F., Parnell, J.J., Pühler, A., Pylro, V., Ramos, J.L., Roesch, L., Schleper, C., Schloter, M., Sczyrba, A., Sessitsch, A., Sjöling, S., Sørensen, J., Sørensen, S.J., Tebbe, C.C., Topp, E., Tsiamis, G., Van Elsas, J.D., Van Keulen, G., Wagner, M., Widmer, F., Zhang, T., Zhang, X., Zhao, L., Zhu, Y.-G., Vogel, T.M. & Simonet, P. (2016). Back to the future of soil metagenomics. Frontiers in Microbiology, 7: 73. doi:10.3389/fmicb.2016.00073.
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