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548 Publikationen

2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1601771 OA
Rückert, Christian, Koch, DJ, Rey, DA, Albersmeier, Andreas, Mormann, S, Pühler, Alfred, and Kalinowski, Jörn. 2005. “Functional genomics and expression analysis of the Corynebacterium glutamicum fpr2-cysIXHDNYZ gene cluster involved in assimilatory sulphate reduction”. BMC Genomics 6 (1): 121.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1602010
Chao, Tzu-Chiao, Buhrmester, Jens, Hansmeier, Nicole, Pühler, Alfred, and Weidner, Stefan. 2005. “Role of the regulatory gene rirA in the transcriptional response of Sinorhizobium meliloti to iron limitation”. APPLIED AND ENVIRONMENTAL MICROBIOLOGY 71 (10): 5969-5982.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1602017
Koch, DJ, Rückert, Christian, Rey, DA, Mix, Andreas, Pühler, Alfred, and Kalinowski, Jörn. 2005. “Role of the ssu and seu genes of Corynebacterium glutamicum ATCC 13032 in utilization of sulfonates and sulfonate esters as sulfur sources”. APPLIED AND ENVIRONMENTAL MICROBIOLOGY 71 (10): 6104-6114.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1602137
Koch, DJ, Rückert, Christian, Albersmeier, Andreas, Hüser, AT, Tauch, Andreas, Pühler, Alfred, and Kalinowski, Jörn. 2005. “The transcriptional regulator SsuR activates expression of the Corynebacterium glutamicum sulphonate utilization genes in the absence of sulphate”. Mol Microbiol 58 (2): 480-494.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1604877
Risse, Joe Max, Pühler, Alfred, and Flaschel, Erwin. 2005. “Production of N-acetyl-phosphinothricin: A substance used for inducing male sterility in transgenic plants”. ENGINEERING IN LIFE SCIENCES 5 (1): 38-45.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1603956
Tennstedt, T., Szczepanowski, Rafael, Krahn, Irene, Pühler, Alfred, and Schlüter, Andreas. 2005. “Sequence of the 68,869 bp IncP-1 alpha plasmid pTB11 from a waste-water treatment plant reveals a highly conserved backbone, a Tn402-like integron and other transposable elements”. PLASMID 53 (3): 218-238.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1604074
Hohnjec, N, Vieweg, ME, Pühler, Alfred, Becker, Anke, and Küster, Helge. 2005. “Overlaps in the transcriptional profiles of Medicago truncatula roots inoculated with two different Glomus fungi provide insights into the genetic program activated during arbuscular mycorrhiza”. Plant Physiol 137 (4): 1283-1301.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1601955
Silberbach, M., Hüser, Andrea T., Kalinowski, Jörn, Pühler, Alfred, Walter, B., Kramer, R., and Burkovski, A. 2005. “DNA microarray analysis of the nitrogen starvation response of Corynebacterium glutamicum”. JOURNAL OF BIOTECHNOLOGY 119 (4): 357-367.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1603317
Tauch, Andreas, Kaiser, Olaf, Hain, Torsten, Goesmann, Alexander, Weisshaar, Bernd, Albersmeier, Andreas, Bekel, Thomas, et al. 2005. “Complete genome sequence and analysis of the multiresistant nosocomial pathogen Corynebacterium jeikeium K411, a lipid-requiring bacterium of the human skin flora”. Journal of Bacteriology 187 (13): 4671-4682.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773606 OA
Brune, Iris, Brinkrolf, Karina, Kalinowski, Jörn, Pühler, Alfred, and Tauch, Andreas. 2005. “The individual and common repertoire of DNA-binding transcriptional regulators of Corynebacterium glutamicum, Corynebacterium efficiens, Corynebacterium diphtheriae and Corynebacterium jeikeium deduced from the complete genome sequences”. BMC Genomics 6 (1): 86.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1601922
Firnhaber, Christian, Pühler, Alfred, and Küster, Helge. 2005. “EST sequencing and time course microarray hybridizations identify more than 700 Medicago truncatula genes with developmental expression regulation in flowers and pods”. Planta 222 (2): 269-283.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1603889
Silberbach, M., Schafer, M., Hüser, Andrea T., Kalinowski, Jörn, Pühler, Alfred, Kramer, R., and Burkovski, A. 2005. “Adaptation of Corynebacterium glutamicum to ammonium limitation: A global analysis using transcriptome and proteome techniques”. APPLIED AND ENVIRONMENTAL MICROBIOLOGY 71 (5): 2391-2402.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1608687
Küster, Helge, Hohnjec, N., Krajinski, F., El Yahyaoui, F., Manthey, Katja, Gouzy, J., Dondrup, M., et al. 2004. “Construction and validation of cDNA-based Mt6k-RIT macro- and microarrays to explore root endosymbioses in the model legume Medicago truncatula”. JOURNAL OF BIOTECHNOLOGY 108 (2): 95-113.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1608839
McHardy, AC, Pühler, Alfred, Kalinowski, Jörn, and Meyer, F. 2004. “Comparing expression level-dependent features in codon usage with protein abundance: An analysis of 'predictive proteomics'”. PROTEOMICS 4 (1): 46-58.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1606270
Hartmann, M, Barsch, A, Niehaus, K, Pühler, Alfred, Tauch, A, and Kalinowski, Jörn. 2004. “The glycosylated cell surface protein Rpf2, containing a resuscitation-promoting factor motif, is involved in intercellular communication of Corynebacterium glutamicum”. ARCHIVES OF MICROBIOLOGY 182 (4): 299-312.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1608345
Becker, Anke, Berges, H., Krol, Elizaveta, Bruand, C., Rüberg, Silvia, Capela, D., Lauber, E., et al. 2004. “Global changes in gene expression in Sinorhizobium meliloti 1021 under microoxic and symbiotic conditions”. MOLECULAR PLANT-MICROBE INTERACTIONS 17 (3): 292-303.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1605656
Szczepanowski, Rafael, Krahn, Irene, Linke, Burkhard, Goesmann, Alexander, Pühler, Alfred, and Schlüter, Andreas. 2004. “Antibiotic multiresistance plasmid pRSB101 isolated from a wastewater treatment plant is related to plasmids residing in phytopathogenic bacteria and carries eight different resistance determinants including a multidrug transport system”. Microbiology 150 (11): 3613-3630.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1607424
McHardy, A. C., Goesmann, Alexander, Pühler, Alfred, and Meyer, F. 2004. “Development of joint application strategies for two microbial gene finders”. BIOINFORMATICS 20 (10): 1622-1631.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1607832
Chao, Tzu-Chiao, Becker, Anke, Buhrmester, Jens, Pühler, Alfred, and Weidner, Stefan. 2004. “The Sinorhizobium meliloti fur gene regulates, with dependence on Mn(II), transcription of the sitABCD operon, encoding a metal-type transporter”. JOURNAL OF BACTERIOLOGY 186 (11): 3609-3620.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1606360
von Stockar, U, and Pühler, Alfred. 2004. “Highlights from the ECB11: building bridges between biosciences and bioengineering”. JOURNAL OF BIOTECHNOLOGY 113 (1-3): 1-2.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1606500
Tauch, Andreas, Bischoff, N., Pühler, Alfred, and Kalinowski, Jörn. 2004. “Comparative genomics identified two conserved DNA modules in a corynebacterial plasmid family present in clinical isolates of the opportunistic human pathogen Corynebacterium jeikeium”. PLASMID 52 (2): 102-118.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1606644
Brzeska, M, Panhorst, Maren, Kamp, Paul-Bertram, Schotter, Jörg, Reiss, Günter, Pühler, Alfred, Becker, Anke, and Brückl, Hubert. 2004. “Detection and manipulation of biomolecules by magnetic carriers”. JOURNAL OF BIOTECHNOLOGY 112 (1-2): 25-33.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1605648
Heuer, H, Szczepanowski, Rafael, Schneiker-Bekel, Susanne, Pühler, Alfred, Top, EM, and Schlüter, Andreas. 2004. “The complete sequences of plasmids pB2 and pB3 provide evidence for a recent ancestor of the IncP-1 beta group without any accessory genes”. Microbiology 150 (11): 3591-3599.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1605701
Krahn, Irene, Szczepanowski, Rafael, Pühler, Alfred, and Schlüter, Andreas. 2004. “Different molecular rearrangements in the integron of the IncP-1 beta resistance plasmid pB10 isolated from a wastewater treatment plant result in elevated beta-lactam resistance levels”. ARCHIVES OF MICROBIOLOGY 182 (6): 429-435.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1606228
El Yahyaoui, F., Küster, Helge, Ben Amor, B., Hohnjec, N., Pühler, Alfred, Becker, Anke, Gouzy, J., et al. 2004. “Expression profiling in Medicago truncatula identifies more than 750 genes differentially expressed during nodulation, including many potential regulators of the symbiotic program(1[w])”. PLANT PHYSIOLOGY 136 (2): 3159-3176.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1606475
Manthey, Katja, Krajinski, F, Hohnjec, N, Firnhaber, C, Pühler, Alfred, Perlick, AM, and Küster, Helge. 2004. “Transcriptome profiling in root nodules and arbuscular mycorrhiza identifies a collection of novel genes induced during Medicago truncatula root endosymbioses”. Mol Plant-Microbe Interact 17 (10): 1063-1077.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1606843
Schiene, K., Donath, S., Brecht, M., Pühler, Alfred, and Niehaus, Karsten. 2004. “A Rab-related small GTP binding protein is predominantly expressed in root nodules of Medicago sativa”. Molecular Genetics and Genomics 272 (1): 57-66.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773148 OA
Ros, Robert, Eckel, Rainer, Bartels, Frank Wilco, Sischka, Andy, Baumgarth, Birgit, Wilking, Sven David, Pühler, Alfred, Sewald, Norbert, Becker, Anke, and Anselmetti, Dario. 2004. “Single molecule force spectroscopy on ligand-DNA complexes: from molecular binding mechanisms to biosensor applications”. Journal of Biotechnology 112 (1-2): 5-12.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773130 OA
Hansmeier, Nicole, Bartels, Frank Wilco, Ros, Robert, Anselmetti, Dario, Tauch, Andreas, Pühler, Alfred, and Kalinowski, Jörn. 2004. “Classification of hyper-variable Corynebacterium glutamicum surface-layer proteins by sequence analyses and atomic force microscopy”. J Biotechnol 112 (1-2): 177-193.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1608095
Schotter, Jörg, Kamp, Paul-Bertram, Becker, Anke, Pühler, Alfred, Reiss, Günter, and Brückl, Hubert. 2004. “Comparison of a prototype magnetoresistive biosensor to standard fluorescent DNA detection”. BIOSENSORS & BIOELECTRONICS 19 (10): 1149-1156.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1608254
Pühler, Alfred, Arlat, M, Becker, A, Gottfert, M, Morrissey, JP, and O'Gara, F. 2004. “What can bacterial genome research teach us about bacteria-plant interactions?”. Current Opinion in Plant Biology 7 (2): 137-147.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1608336
Vieweg, MF, Fruhling, M, Quandt, HJ, Heim, U, Baumlein, H, Pühler, Alfred, Küster, Helge, and Perlick, AM. 2004. “The promoter of the Vicia faba L. leghemoglobin gene VfLb29 is specifically activated in the infected cells of root nodules and in the arbuscule-containing cells of mycorrhizal roots from different legume and nonlegume plants”. Mol Plant Microbe Interact 17 (1): 62-69.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773125 OA
Kleine, Hermann, Wilke, Ralf, Pelargus, Christoph, Rott, Karsten, Pühler, Alfred, Reiss, Günter, Ros, Robert, and Anselmetti, Dario. 2004. “Absence of intrinsic electric conductivity in single dsDNA molecules”. Journal of Biotechnology 112 (1-2): 91-95.
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1609260
Dondrup, M., Goesmann, Alexander, Bartels, D., Kalinowski, Jörn, Krause, L., Linke, Burkhard, Rupp, O., Sczyrba, Alexander, Pühler, Alfred, and Meyer, F. 2003. “EMMA: a platform for consistent storage and efficient analysis of microarray data”. JOURNAL OF BIOTECHNOLOGY 106 (2-3): 135-146.
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1611452
Weidner, Stefan, Pühler, Alfred, and Küster, Helge. 2003. “Genomics insights into symbiotic nitrogen fixation”. CURRENT OPINION IN BIOTECHNOLOGY 14 (2): 200-205.
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1609286
Goesmann, Alexander, Linke, Burkhard, Rupp, O, Krause, L, Bartels, D, Dondrup, M, McHardy, AC, Wilke, A, Pühler, Alfred, and Meyer, F. 2003. “Building a BRIDGE for the integration of heterogeneous data from functional genomics into a platform for systems biology”. JOURNAL OF BIOTECHNOLOGY 106 (2-3): 157-167.
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1609306
Vorhölter, Frank-Jörg, Thias, T., Meyer, F., Bekel, T., Kaiser, O., Pühler, Alfred, and Niehaus, Karsten. 2003. “Comparison of two Xanthomonas campestris pathovar campestris genomes revealed differences in their gene composition”. Journal of Biotechnology 106 (2-3): 193-202.
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1609647
Schlüter, Andreas, Heuer, H., Szczepanowski, Rafael, Forney, L.J., Thomas, C.M., Pühler, Alfred, and Top, E.M. 2003. “The 64 508 bp IncP-1 beta antibiotic multiresistance plasmid pB10 isolated from a waste-water treatment plant provides evidence for recombination between members of different branches of the IncP-1 beta group”. Microbiology 149: 3139-3153.
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1610221
Pühler, Alfred, and Tauch, Andreas. 2003. “A new era in Corynebacterium glutamicum biotechnology”. JOURNAL OF BIOTECHNOLOGY 104 (1-3): 1-3.
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1610269
Rückert, Christian, Pühler, Alfred, and Kalinowski, Jörn. 2003. “Genome-wide analysis of the L-methionine biosynthetic pathway in Corynebacterium glutamicum by targeted gene deletion and homologous complementation”. JOURNAL OF BIOTECHNOLOGY 104 (1-3): 213-228.
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1611014
Brand, S., Niehaus, Karsten, Pühler, Alfred, and Kalinowski, Jörn. 2003. “Identification and functional analysis of six mycolyltransferase genes of Corynebacterium glutamicum ATCC 13032: the genes cop1, cmt1, and cmt2 can replace each other in the synthesis of trehalose dicorynomycolate, a component of the mycolic acid layer of the cell envelope”. Archives of Microbiology 180 (1): 33-44.
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1609247
Pühler, Alfred, and Selbitschka, Werner. 2003. “Genome research on bacteria relevant for agriculture, environment and biotechnology”. JOURNAL OF BIOTECHNOLOGY 106 (2-3): 119-120.
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1610193
Hohnjec, N., Perlick, A. M., Pühler, Alfred, and Küster, Helge. 2003. “The Medicago truncatula sucrose synthase gene MtSucS1 is activated both in the infected region of root nodules and in the cortex of roots colonized by arbuscular mycorrhizal fungi”. Mol Plant Microbe Interact 16 (10): 903-915.
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1610484
Tennstedt, T, Szczepanowski, Rafael, Braun, S, Pühler, Alfred, and Schluter, A. 2003. “Occurrence of integron-associated resistance gene cassettes located on antibiotic resistance plasmids isolated from a wastewater treatment plant”. FEMS MICROBIOLOGY ECOLOGY 45 (3): 239-252.
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1610260
Hartmann, M, Tauch, Andreas, Eggeling, L, Bathe, B, Mockel, B, Pühler, Alfred, and Kalinowski, Jörn. 2003. “Identification and characterization of the last two unknown genes, dapC and dapF, in the succinylase branch of the L-lysine biosynthesis of Corynebacterium glutamicum”. J Biotechnol 104 (1-3): 199-211.
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1609251
Kaiser, O., Bartels, D., Bekel, Thomas, Goesmann, Alexander, Kespohl, S., Pühler, Alfred, and Meyer, F. 2003. “Whole genome shotgun sequencing guided-by bioinformatics pipelines - An optimized approach for an established technique”. JOURNAL OF BIOTECHNOLOGY 106 (2-3): 121-133.
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1609272
Wilke, A., Rückert, Christian, Bartels, D., Dondrup, M, Goesmann, Alexander, Hüser, A. T., Kespohl, S., et al. 2003. “Bioinformatics support for high-throughput proteomics”. JOURNAL OF BIOTECHNOLOGY 106 (2-3): 147-156.
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1609328
Rüberg, Silvia, Tian, Z. X., Krol, E., Linke, Burkhard, Meyer, F., Wang, Y. P., Pühler, Alfred, Weidner, Stefan, and Becker, Anke. 2003. “Construction and validation of a Sinorhizobium meliloti whole genome DNA microarray: genome-wide profiling of osmoadaptive gene expression”. JOURNAL OF BIOTECHNOLOGY 106 (2-3): 255-268.
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1610274
McHardy, AC, Tauch, Andreas, Rückert, Christian, Pühler, Alfred, and Kalinowski, Jörn. 2003. “Genome-based analysis of biosynthetic aminotransferase genes of Corynebacterium glutamicum”. J Biotechnol 104 (1-3): 229-240.
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1612324 OA
Tauch, Andreas, Schlüter, Andreas, Bischoff, N., Goesmann, Alexander, Meyer, F., and Pühler, Alfred. 2003. “The 79,370-bp conjugative plasmid pB4 consists of an IncP-1 beta backbone loaded with a chromate resistance transposon, the strA-strB streptomycin resistance gene pair, the oxacillinase gene bla(NPS-1), and a tripartite antibiotic efflux system of the resistance-nodulation-division family”. Molecular Genetics and Genomics 268 (5): 570-584.
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