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547 Publikationen

2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1599402
Hansmeier, N., Chao, T. C., Kalinowski, Jörn, Pühler, Alfred, and Tauch, Andreas. 2006. “Mapping and comprehensive analysis of the extracellular and cell surface proteome of the human pathogen Corynebacterium diphtheriae”. PROTEOMICS 6 (8): 2465-2476.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1596821
Selbitschka, Werner, Keller, M., Miethling-Graff, R., Dresing, U., Schwieger, F., Krahn, I., Homann, I., Dammann-Kalinowski, T., Pühler, Alfred, and Tebbe, C. C. 2006. “Long-term field release of bioluminescent Sinorhizobium meliloti strains to assess the influence of a recA mutation on the strains' survival”. MICROBIAL ECOLOGY 52 (3): 583-595.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1597413
Gottschalk, G., Goebel, W., and Pühler, Alfred. 2006. “Aspects of prokaryotic genome research”. JOURNAL OF BIOTECHNOLOGY 126 (1): 1-2.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1598081
Bönemann, Gabriele, Stiens, Michael, Pühler, Alfred, and Schlüter, Andreas. 2006. “Mobilizable IncQ-related plasmid carrying a new quinolone resistance gene, qnrS2, isolated from the bacterial community of a wastewater treatment plant”. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY 50 (9): 3075-3080.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1598182
Schneiker-Bekel, Susanne, dos Santos, Vitor A. P. Martins, Bartels, Daniela, Bekel, Thomas, Brecht, Martina, Buhrmester, Jens, Chernikova, Tatyana N., et al. 2006. “Genome sequence of the ubiquitous hydrocarbon-degrading marine bacterium Alcanivorax borkumensis”. Nature Biotechnology 24 (8): 997-1004.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1598803
Grabley, S, and Pühler, Alfred. 2006. “BioPerspectives - From basic research to industrial production”. JOURNAL OF BIOTECHNOLOGY 124 (1): 1-3.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1599618
Hansmeier, N, Albersmeier, Andreas, Tauch, Andreas, Damberg, T, Ros, R, Anselmetti, Dario, Pühler, Alfred, and Kalinowski, Jörn. 2006. “The surface (S)-layer gene cspB of Corynebacterium glutamicum is transcriptionally activated by a LuxR-type regulator and located on a 6 kb genomic island absent from the type strain ATCC 13032”. Microbiology 152 (4): 923-935.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1600852
Hansmeier, N., Chao, T. C., Pühler, Alfred, Tauch, Andreas, and Kalinowski, Jörn. 2006. “The cytosolic, cell surface and extracellular proteomes of the biotechnologically important soil bacterium Cornyebacterium efficiens YS-314 in comparison to those of Corynebacterium glutamicum ATCC 13032”. PROTEOMICS 6 (1): 233-250.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1599383
Stiens, M, Schneiker-Bekel, Susanne, Keller, M, Kuhn, S, Pühler, Alfred, and Schlüter, Andreas. 2006. “Sequence analysis of the 144-kilobase accessory plasmid pSmeSM11a, isolated from a dominant Sinorhizobium meliloti strain identified during a long-term field release experimerit”. Appl Environ Microbiol 72 (5): 3662-3672.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1600185
Gaillard, M, Vallaeys, T, Vorhölter, Frank-Jörg, Minoia, M, Werlen, C, Sentchilo, V, Pühler, Alfred, and van der Meer, JR. 2006. “The clc element of Pseudomonas sp strain B13, a genomic island with various catabolic properties”. JOURNAL OF BACTERIOLOGY 188 (5): 1999-2013.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1598296
Nielsen, Jens, and Pühler, Alfred. 2006. “Highlights from ECB12 - Bringing genomes to life”. JOURNAL OF BIOTECHNOLOGY 124 (4): 627-628.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1868701
Tauch, Andreas, Trost, Eva, Bekel, Thomas, Goesmann, Alexander, Ludewig, U., and Pühler, Alfred. 2006. “Ultrafast de novo sequencing of Corynebacterium urealyticum using the Genome Sequencer 20 System”. Biochemica 4: 4-6.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773853 OA
Mormann, Sascha, Lömker, Alexander, Rückert, Christian, Gaigalat, Lars, Tauch, Andreas, Pühler, Alfred, and Kalinowski, Jörn. 2006. “Random mutagenesis in Corynebacterium glutamicum ATCC 13032 using an IS6100-based transposon vector identified the last unknown gene in the histidine biosynthesis pathway”. BMC Genomics 7 (1): 205.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1599211
Mahne, M., Tauch, Andreas, Pühler, Alfred, and Kalinowski, Jörn. 2006. “The Corynebacterium glutamicum gene pmt encoding a glycosyltransferase related to eukaryotic protein-O-mannosyltransferases is essential for glycosylation of the resuscitation promoting factor (Rpf2) and other secreted proteins”. FEMS MICROBIOLOGY LETTERS 259 (2): 226-233.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1596976
Krause, Andrea, Ramakumar, Adarsh, Bartels, Daniela, Battistoni, Federico, Bekel, Thomas, Boch, Jens, Boehm, Melanie, et al. 2006. “Complete genome of the mutualistic, N-2-fixing grass endophyte Azoarcus sp strain BH72”. Nature Biotechnology 24 (11): 1385-1391.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1597316
Hain, Torsten, Steinweg, Christiane, Kuenne, Carsten Tobias, Billion, Andre, Ghai, Rohit, Chatterjee, Som Subhra, Domann, Eugen, et al. 2006. “Whole-genome sequence of Listeria welshimeri reveals common steps in genome reduction with Listeria innocua as compared to Listeria monocytogenes”. Journal of Bacteriology 188 (23): 8299-8302.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1631957
Krause, Lutz, Diaz, Naryttza N., Bartels, Daniela, Edwards, Robert A., Pühler, Alfred, Rohwer, Forest, Meyer, Folker, and Stoye, Jens. 2006. “Finding novel genes in bacterial communities isolated from the environment”. BIOINFORMATICS 22 (14): e281-e289.
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2005 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2447862
Pühler, Alfred, Becker, A., Buhrmester, Jens, Chao, Tzu-Chiao, Rüberg, Silvia, and Weidner, Stefan. 2005. “What can bacterial genome research teach us about iron uptake in Sinorhizobium meliloti?”. In Biological Nitrogen Fixation, Sustainable Agriculture and the Environment: Proceedings of the 14th International Nitrogen Fixation Congress, ed. Yi-Ping Wang, Min Lin, Zhe-Xian Tian, Claudine Elmerich, and William E. Newton, 119-122. Current Plant Science and Biotechnology in Agriculture, 41. Springer.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1603458
Hüser, A. T., Chassagnole, C., Lindley, N. D., Merkamm, M., Guyonvarch, A., Elisakova, V., Patek, M., et al. 2005. “Rational design of a Corynebacterium glutamicum pantothenate production strain and its characterization by metabolic flux analysis and genorne-wide transcriptional profiling”. APPLIED AND ENVIRONMENTAL MICROBIOLOGY 71 (6): 3255-3268.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1603821
Rey, D. A., Nentwich, S. S., Koch, D. J., Rückert, Christian, Pühler, Alfred, Tauch, Andreas, and Kalinowski, Jörn. 2005. “The McbR repressor modulated by the effector substance S-adenosylhomocysteine controls directly the transcription of a regulon involved in sulphur metabolism of Corynebacterium glutamicum ATCC 13032”. MOLECULAR MICROBIOLOGY 56 (4): 871-887.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1603291
Braun, S. G., Meyer, A., Olst, O., Pühler, Alfred, and Niehaus, Karsten. 2005. “Characterization of the Xanthomonas campestris pv. campestris lipopolysaccharide substructures essential for elicitation of an oxidative burst in tobacco cells”. Molecular Plant - Microbe Interactions 18 (7): 674-681.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773302 OA
Bartels, Daniela, Kespohl, Sebastian, Albaum, Stefan, Drüke, Tanja, Goesmann, Alexander, Herold, Julia, Kaiser, Olaf, et al. 2005. “BACCardI - a tool for the validation of genomic assemblies, assisting genome finishing and intergenome comparison”. Bioinformatics 21 (7): 853-859.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1604683
Fehlberg, V., Vieweg, M. F., Dohmann, E. M. N., Hohnjec, N., Pühler, Alfred, Perlick, A. M., and Küster, Helge. 2005. “The promoter of the leghaemoglobin gene VfLb29: functional analysis and identification of modules necessary for its activation in the infected cells of root nodules and in the arbuscule-containing cells of mycorrhizal roots”. JOURNAL OF EXPERIMENTAL BOTANY 56 (413): 799-806.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1604328
Szczepanowski, Rafael, Braun, S, Riedel, V, Schneiker-Bekel, Susanne, Krahn, Irene, Pühler, Alfred, and Schlüter, Andreas. 2005. “The 120 592 bp lncF plasmid pRSB107 isolated from a sewage-treatment plant encodes nine different anti biotic-resistance determinants, two iron-acquisition systems and other putative virulence-associated functions”. MICROBIOLOGY-SGM 151 (4): 1095-1111.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1864013
Tennstedt, T., Heuer, H., Top, E.M., Szczepanowski, Rafael, Pühler, Alfred, and Schlüter, Andreas. 2005. “Genomics of resistance plasmids isolated from wastewater treatment plants”. Plasmid 53 (1): 40-41.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1602311
Schlüter, Andreas, Heuer, H., Szczepanowski, Rafael, Poler, S. M., Schneiker-Bekel, Susanne, Pühler, Alfred, and Top, E. M. 2005. “Plasmid pB8 is closely related to the prototype IncP-1 beta plasmid R751 but transfers poorly to Escherichia coli and carries a new transposon encoding a small multidrug resistance efflux protein”. PLASMID 54 (2): 135-148.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1601712
Thieme, F, Koebnik, R, Bekel, T, Berger, C, Boch, J, Buttner, D, Caldana, C, et al. 2005. “Insights into genome plasticity and pathogenicity of the plant pathogenic bacterium Xanthomonas campestris pv. vesicatoria revealed by the complete genome sequence”. JOURNAL OF BACTERIOLOGY 187 (21): 7254-7266.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1602933
Frenzel, A., Manthey, Katja, Perlick, A. M., Meyer, F., Pühler, Alfred, Küster, Helge, and Krajinski, F. 2005. “Combined transcriptome profiling reveals a novel family of arbuscular mycorrhizal-specific Medicago truncatula lectin genes”. Mol Plant-Microbe Interact 18 (8): 771-782.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
2005 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1601308
Reiss, Günter, Brückl, Hubert, Hütten, Andreas, Schotter, Jörg, Brzeska, Monika, Panhorst, Michael, Sudfeld, Daniela, et al. 2005. “Magnetoresistive sensors and magnetic nanoparticles for biotechnology”, Journal of Materials Research, 20 (12): 3294-3302.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1601771 OA
Rückert, Christian, Koch, DJ, Rey, DA, Albersmeier, Andreas, Mormann, S, Pühler, Alfred, and Kalinowski, Jörn. 2005. “Functional genomics and expression analysis of the Corynebacterium glutamicum fpr2-cysIXHDNYZ gene cluster involved in assimilatory sulphate reduction”. BMC Genomics 6 (1): 121.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1602010
Chao, Tzu-Chiao, Buhrmester, Jens, Hansmeier, Nicole, Pühler, Alfred, and Weidner, Stefan. 2005. “Role of the regulatory gene rirA in the transcriptional response of Sinorhizobium meliloti to iron limitation”. APPLIED AND ENVIRONMENTAL MICROBIOLOGY 71 (10): 5969-5982.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1602017
Koch, DJ, Rückert, Christian, Rey, DA, Mix, Andreas, Pühler, Alfred, and Kalinowski, Jörn. 2005. “Role of the ssu and seu genes of Corynebacterium glutamicum ATCC 13032 in utilization of sulfonates and sulfonate esters as sulfur sources”. APPLIED AND ENVIRONMENTAL MICROBIOLOGY 71 (10): 6104-6114.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1602137
Koch, DJ, Rückert, Christian, Albersmeier, Andreas, Hüser, AT, Tauch, Andreas, Pühler, Alfred, and Kalinowski, Jörn. 2005. “The transcriptional regulator SsuR activates expression of the Corynebacterium glutamicum sulphonate utilization genes in the absence of sulphate”. Mol Microbiol 58 (2): 480-494.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1604877
Risse, Joe Max, Pühler, Alfred, and Flaschel, Erwin. 2005. “Production of N-acetyl-phosphinothricin: A substance used for inducing male sterility in transgenic plants”. ENGINEERING IN LIFE SCIENCES 5 (1): 38-45.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1603956
Tennstedt, T., Szczepanowski, Rafael, Krahn, Irene, Pühler, Alfred, and Schlüter, Andreas. 2005. “Sequence of the 68,869 bp IncP-1 alpha plasmid pTB11 from a waste-water treatment plant reveals a highly conserved backbone, a Tn402-like integron and other transposable elements”. PLASMID 53 (3): 218-238.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1604074
Hohnjec, N, Vieweg, ME, Pühler, Alfred, Becker, Anke, and Küster, Helge. 2005. “Overlaps in the transcriptional profiles of Medicago truncatula roots inoculated with two different Glomus fungi provide insights into the genetic program activated during arbuscular mycorrhiza”. Plant Physiol 137 (4): 1283-1301.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1601955
Silberbach, M., Hüser, Andrea T., Kalinowski, Jörn, Pühler, Alfred, Walter, B., Kramer, R., and Burkovski, A. 2005. “DNA microarray analysis of the nitrogen starvation response of Corynebacterium glutamicum”. JOURNAL OF BIOTECHNOLOGY 119 (4): 357-367.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1603317
Tauch, Andreas, Kaiser, Olaf, Hain, Torsten, Goesmann, Alexander, Weisshaar, Bernd, Albersmeier, Andreas, Bekel, Thomas, et al. 2005. “Complete genome sequence and analysis of the multiresistant nosocomial pathogen Corynebacterium jeikeium K411, a lipid-requiring bacterium of the human skin flora”. Journal of Bacteriology 187 (13): 4671-4682.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773606 OA
Brune, Iris, Brinkrolf, Karina, Kalinowski, Jörn, Pühler, Alfred, and Tauch, Andreas. 2005. “The individual and common repertoire of DNA-binding transcriptional regulators of Corynebacterium glutamicum, Corynebacterium efficiens, Corynebacterium diphtheriae and Corynebacterium jeikeium deduced from the complete genome sequences”. BMC Genomics 6 (1): 86.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1601922
Firnhaber, Christian, Pühler, Alfred, and Küster, Helge. 2005. “EST sequencing and time course microarray hybridizations identify more than 700 Medicago truncatula genes with developmental expression regulation in flowers and pods”. Planta 222 (2): 269-283.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1603889
Silberbach, M., Schafer, M., Hüser, Andrea T., Kalinowski, Jörn, Pühler, Alfred, Kramer, R., and Burkovski, A. 2005. “Adaptation of Corynebacterium glutamicum to ammonium limitation: A global analysis using transcriptome and proteome techniques”. APPLIED AND ENVIRONMENTAL MICROBIOLOGY 71 (5): 2391-2402.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1608687
Küster, Helge, Hohnjec, N., Krajinski, F., El Yahyaoui, F., Manthey, Katja, Gouzy, J., Dondrup, M., et al. 2004. “Construction and validation of cDNA-based Mt6k-RIT macro- and microarrays to explore root endosymbioses in the model legume Medicago truncatula”. JOURNAL OF BIOTECHNOLOGY 108 (2): 95-113.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1608839
McHardy, AC, Pühler, Alfred, Kalinowski, Jörn, and Meyer, F. 2004. “Comparing expression level-dependent features in codon usage with protein abundance: An analysis of 'predictive proteomics'”. PROTEOMICS 4 (1): 46-58.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1606270
Hartmann, M, Barsch, A, Niehaus, K, Pühler, Alfred, Tauch, A, and Kalinowski, Jörn. 2004. “The glycosylated cell surface protein Rpf2, containing a resuscitation-promoting factor motif, is involved in intercellular communication of Corynebacterium glutamicum”. ARCHIVES OF MICROBIOLOGY 182 (4): 299-312.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1605656
Szczepanowski, Rafael, Krahn, Irene, Linke, Burkhard, Goesmann, Alexander, Pühler, Alfred, and Schlüter, Andreas. 2004. “Antibiotic multiresistance plasmid pRSB101 isolated from a wastewater treatment plant is related to plasmids residing in phytopathogenic bacteria and carries eight different resistance determinants including a multidrug transport system”. Microbiology 150 (11): 3613-3630.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1607424
McHardy, A. C., Goesmann, Alexander, Pühler, Alfred, and Meyer, F. 2004. “Development of joint application strategies for two microbial gene finders”. BIOINFORMATICS 20 (10): 1622-1631.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1608345
Becker, Anke, Berges, H., Krol, Elizaveta, Bruand, C., Rüberg, Silvia, Capela, D., Lauber, E., et al. 2004. “Global changes in gene expression in Sinorhizobium meliloti 1021 under microoxic and symbiotic conditions”. MOLECULAR PLANT-MICROBE INTERACTIONS 17 (3): 292-303.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1606360
von Stockar, U, and Pühler, Alfred. 2004. “Highlights from the ECB11: building bridges between biosciences and bioengineering”. JOURNAL OF BIOTECHNOLOGY 113 (1-3): 1-2.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1606500
Tauch, Andreas, Bischoff, N., Pühler, Alfred, and Kalinowski, Jörn. 2004. “Comparative genomics identified two conserved DNA modules in a corynebacterial plasmid family present in clinical isolates of the opportunistic human pathogen Corynebacterium jeikeium”. PLASMID 52 (2): 102-118.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1606644
Brzeska, M, Panhorst, Maren, Kamp, Paul-Bertram, Schotter, Jörg, Reiss, Günter, Pühler, Alfred, Becker, Anke, and Brückl, Hubert. 2004. “Detection and manipulation of biomolecules by magnetic carriers”. JOURNAL OF BIOTECHNOLOGY 112 (1-2): 25-33.
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