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547 Publikationen

2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1599402
Hansmeier N, Chao TC, Kalinowski J, Pühler A, Tauch A (2006)
Mapping and comprehensive analysis of the extracellular and cell surface proteome of the human pathogen Corynebacterium diphtheriae.
PROTEOMICS 6(8): 2465-2476.
PUB | DOI | WoS | PubMed | Europe PMC
 
2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1596821
Selbitschka W, Keller M, Miethling-Graff R, Dresing U, Schwieger F, Krahn I, Homann I, Dammann-Kalinowski T, Pühler A, Tebbe CC (2006)
Long-term field release of bioluminescent Sinorhizobium meliloti strains to assess the influence of a recA mutation on the strains' survival.
MICROBIAL ECOLOGY 52(3): 583-595.
PUB | DOI | WoS | PubMed | Europe PMC
 
2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1597413
Gottschalk G, Goebel W, Pühler A (2006)
Aspects of prokaryotic genome research.
JOURNAL OF BIOTECHNOLOGY 126(1): 1-2.
PUB | DOI | WoS | PubMed | Europe PMC
 
2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1598081
Bönemann G, Stiens M, Pühler A, Schlüter A (2006)
Mobilizable IncQ-related plasmid carrying a new quinolone resistance gene, qnrS2, isolated from the bacterial community of a wastewater treatment plant.
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY 50(9): 3075-3080.
PUB | DOI | WoS | PubMed | Europe PMC
 
2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1598182
Schneiker-Bekel S, dos Santos VAPM, Bartels D, Bekel T, Brecht M, Buhrmester J, Chernikova TN, Denaro R, Ferrer M, Gertler C, Goesmann A, Golyshina OV, Kaminski F, Khachane AN, Lang S, Linke B, McHardy AC, Meyer F, Nechitaylo T, Pühler A, Regenhardt D, Rupp O, Sabirova JS, Selbitschka W, Yakimov MM, Timmis KN, Vorhölter F-J, Weidner S, Kaiser O, Golyshin PN (2006)
Genome sequence of the ubiquitous hydrocarbon-degrading marine bacterium Alcanivorax borkumensis.
Nature Biotechnology 24(8): 997-1004.
PUB | DOI | WoS | PubMed | Europe PMC
 
2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1598803
Grabley S, Pühler A (2006)
BioPerspectives - From basic research to industrial production.
JOURNAL OF BIOTECHNOLOGY 124(1): 1-3.
PUB | DOI | WoS
 
2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1600852
Hansmeier N, Chao TC, Pühler A, Tauch A, Kalinowski J (2006)
The cytosolic, cell surface and extracellular proteomes of the biotechnologically important soil bacterium Cornyebacterium efficiens YS-314 in comparison to those of Corynebacterium glutamicum ATCC 13032.
PROTEOMICS 6(1): 233-250.
PUB | DOI | WoS | PubMed | Europe PMC
 
2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1599618
Hansmeier N, Albersmeier A, Tauch A, Damberg T, Ros R, Anselmetti D, Pühler A, Kalinowski J (2006)
The surface (S)-layer gene cspB of Corynebacterium glutamicum is transcriptionally activated by a LuxR-type regulator and located on a 6 kb genomic island absent from the type strain ATCC 13032.
Microbiology 152(4): 923-935.
PUB | DOI | WoS | PubMed | Europe PMC
 
2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1598296
Nielsen J, Pühler A (2006)
Highlights from ECB12 - Bringing genomes to life.
JOURNAL OF BIOTECHNOLOGY 124(4): 627-628.
PUB | DOI | WoS
 
2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1599383
Stiens M, Schneiker-Bekel S, Keller M, Kuhn S, Pühler A, Schlüter A (2006)
Sequence analysis of the 144-kilobase accessory plasmid pSmeSM11a, isolated from a dominant Sinorhizobium meliloti strain identified during a long-term field release experimerit.
Appl Environ Microbiol 72(5): 3662-3672.
PUB | DOI | WoS | PubMed | Europe PMC
 
2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1600185
Gaillard M, Vallaeys T, Vorhölter F-J, Minoia M, Werlen C, Sentchilo V, Pühler A, van der Meer JR (2006)
The clc element of Pseudomonas sp strain B13, a genomic island with various catabolic properties.
JOURNAL OF BACTERIOLOGY 188(5): 1999-2013.
PUB | DOI | WoS | PubMed | Europe PMC
 
2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1868701
Tauch A, Trost E, Bekel T, Goesmann A, Ludewig U, Pühler A (2006)
Ultrafast de novo sequencing of Corynebacterium urealyticum using the Genome Sequencer 20 System.
Biochemica 4: 4-6.
PUB
 
2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773853 OA
Mormann S, Lömker A, Rückert C, Gaigalat L, Tauch A, Pühler A, Kalinowski J (2006)
Random mutagenesis in Corynebacterium glutamicum ATCC 13032 using an IS6100-based transposon vector identified the last unknown gene in the histidine biosynthesis pathway.
BMC Genomics 7(1): 205.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1599211
Mahne M, Tauch A, Pühler A, Kalinowski J (2006)
The Corynebacterium glutamicum gene pmt encoding a glycosyltransferase related to eukaryotic protein-O-mannosyltransferases is essential for glycosylation of the resuscitation promoting factor (Rpf2) and other secreted proteins.
FEMS MICROBIOLOGY LETTERS 259(2): 226-233.
PUB | DOI | WoS | PubMed | Europe PMC
 
2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1596976
Krause A, Ramakumar A, Bartels D, Battistoni F, Bekel T, Boch J, Boehm M, Friedrich F, Hurek T, Krause L, Linke B, McHardy AC, Sarkar A, Schneiker-Bekel S, Syed AA, Thauer R, Vorhölter F-J, Weidner S, Pühler A, Reinhold-Hurek B, Kaiser O, Goesmann A (2006)
Complete genome of the mutualistic, N-2-fixing grass endophyte Azoarcus sp strain BH72.
Nature Biotechnology 24(11): 1385-1391.
PUB | DOI | WoS | PubMed | Europe PMC
 
2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1597316
Hain T, Steinweg C, Kuenne CT, Billion A, Ghai R, Chatterjee SS, Domann E, Kaerst U, Goesmann A, Bekel T, Bartels D, Kaiser O, Meyer F, Pühler A, Weisshaar B, Wehland J, Liang C, Dandekar T, Lampidis R, Kreft J, Goebel W, Chakraborty T (2006)
Whole-genome sequence of Listeria welshimeri reveals common steps in genome reduction with Listeria innocua as compared to Listeria monocytogenes.
Journal of Bacteriology 188(23): 8299-8302.
PUB | DOI | WoS | PubMed | Europe PMC
 
2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1631957
Krause L, Diaz NN, Bartels D, Edwards RA, Pühler A, Rohwer F, Meyer F, Stoye J (2006)
Finding novel genes in bacterial communities isolated from the environment.
BIOINFORMATICS 22(14): e281-e289.
PUB | DOI | WoS | PubMed | Europe PMC
 
2005 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2447862
Pühler A, Becker A, Buhrmester J, Chao T-C, Rüberg S, Weidner S (2005)
What can bacterial genome research teach us about iron uptake in Sinorhizobium meliloti?
In: Biological Nitrogen Fixation, Sustainable Agriculture and the Environment: Proceedings of the 14th International Nitrogen Fixation Congress. Wang Y-P, Lin M, Tian Z-X, Elmerich C, Newton WE (Eds); Current Plant Science and Biotechnology in Agriculture, 41, Springer: 119-122.
PUB
 
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1603458
Hüser AT, Chassagnole C, Lindley ND, Merkamm M, Guyonvarch A, Elisakova V, Patek M, Kalinowski J, Brune I, Pühler A, Tauch A (2005)
Rational design of a Corynebacterium glutamicum pantothenate production strain and its characterization by metabolic flux analysis and genorne-wide transcriptional profiling.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY 71(6): 3255-3268.
PUB | DOI | WoS | PubMed | Europe PMC
 
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1603821
Rey DA, Nentwich SS, Koch DJ, Rückert C, Pühler A, Tauch A, Kalinowski J (2005)
The McbR repressor modulated by the effector substance S-adenosylhomocysteine controls directly the transcription of a regulon involved in sulphur metabolism of Corynebacterium glutamicum ATCC 13032.
MOLECULAR MICROBIOLOGY 56(4): 871-887.
PUB | DOI | WoS | PubMed | Europe PMC
 
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1603291
Braun SG, Meyer A, Olst O, Pühler A, Niehaus K (2005)
Characterization of the Xanthomonas campestris pv. campestris lipopolysaccharide substructures essential for elicitation of an oxidative burst in tobacco cells.
Molecular Plant - Microbe Interactions 18(7): 674-681.
PUB | DOI | WoS | PubMed | Europe PMC
 
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773302 OA
Bartels D, Kespohl S, Albaum S, Drüke T, Goesmann A, Herold J, Kaiser O, Pühler A, Pfeiffer F, Raddatz G, Stoye J, Meyer F, Schuster SC (2005)
BACCardI - a tool for the validation of genomic assemblies, assisting genome finishing and intergenome comparison.
Bioinformatics 21(7): 853-859.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1604683
Fehlberg V, Vieweg MF, Dohmann EMN, Hohnjec N, Pühler A, Perlick AM, Küster H (2005)
The promoter of the leghaemoglobin gene VfLb29: functional analysis and identification of modules necessary for its activation in the infected cells of root nodules and in the arbuscule-containing cells of mycorrhizal roots.
JOURNAL OF EXPERIMENTAL BOTANY 56(413): 799-806.
PUB | DOI | WoS | PubMed | Europe PMC
 
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1604328
Szczepanowski R, Braun S, Riedel V, Schneiker-Bekel S, Krahn I, Pühler A, Schlüter A (2005)
The 120 592 bp lncF plasmid pRSB107 isolated from a sewage-treatment plant encodes nine different anti biotic-resistance determinants, two iron-acquisition systems and other putative virulence-associated functions.
MICROBIOLOGY-SGM 151(4): 1095-1111.
PUB | DOI | WoS | PubMed | Europe PMC
 
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1864013
Tennstedt T, Heuer H, Top EM, Szczepanowski R, Pühler A, Schlüter A (2005)
Genomics of resistance plasmids isolated from wastewater treatment plants.
Plasmid 53(1): 40-41.
PUB
 
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1602311
Schlüter A, Heuer H, Szczepanowski R, Poler SM, Schneiker-Bekel S, Pühler A, Top EM (2005)
Plasmid pB8 is closely related to the prototype IncP-1 beta plasmid R751 but transfers poorly to Escherichia coli and carries a new transposon encoding a small multidrug resistance efflux protein.
PLASMID 54(2): 135-148.
PUB | DOI | WoS | PubMed | Europe PMC
 
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1601712
Thieme F, Koebnik R, Bekel T, Berger C, Boch J, Buttner D, Caldana C, Gaigalat L, Goesmann A, Kay S, Kirchner O, Lanz C, Linke B, McHardy AC, Meyer F, Mittenhuber G, Nies DH, Niesbach-Klosgen U, Patschkowski T, Rückert C, Rupp O, Schneiker-Bekel S, Schuster SC, Vorhölter F-J, Weber E, Pühler A, Bonas U, Bartels D, Kaiser O (2005)
Insights into genome plasticity and pathogenicity of the plant pathogenic bacterium Xanthomonas campestris pv. vesicatoria revealed by the complete genome sequence.
JOURNAL OF BACTERIOLOGY 187(21): 7254-7266.
PUB | DOI | WoS | PubMed | Europe PMC
 
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1602933
Frenzel A, Manthey K, Perlick AM, Meyer F, Pühler A, Küster H, Krajinski F (2005)
Combined transcriptome profiling reveals a novel family of arbuscular mycorrhizal-specific Medicago truncatula lectin genes.
Mol Plant-Microbe Interact 18(8): 771-782.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
2005 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1601308
Reiss G, Brückl H, Hütten A, Schotter J, Brzeska M, Panhorst M, Sudfeld D, Becker A, Kamp P-B, Pühler A, Wojczykowski K, Jutzi P (2005)
Magnetoresistive sensors and magnetic nanoparticles for biotechnology.
Journal of Materials Research 20(12): 3294-3302.
PUB | DOI | WoS
 
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1601771 OA
Rückert C, Koch DJ, Rey DA, Albersmeier A, Mormann S, Pühler A, Kalinowski J (2005)
Functional genomics and expression analysis of the Corynebacterium glutamicum fpr2-cysIXHDNYZ gene cluster involved in assimilatory sulphate reduction.
BMC Genomics 6(1): 121.
PUB | PDF | DOI | WoS | PubMed | Europe PMC | GenBank
 
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1602010
Chao T-C, Buhrmester J, Hansmeier N, Pühler A, Weidner S (2005)
Role of the regulatory gene rirA in the transcriptional response of Sinorhizobium meliloti to iron limitation.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY 71(10): 5969-5982.
PUB | DOI | WoS | PubMed | Europe PMC
 
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1602017
Koch DJ, Rückert C, Rey DA, Mix A, Pühler A, Kalinowski J (2005)
Role of the ssu and seu genes of Corynebacterium glutamicum ATCC 13032 in utilization of sulfonates and sulfonate esters as sulfur sources.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY 71(10): 6104-6114.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1602137
Koch DJ, Rückert C, Albersmeier A, Hüser AT, Tauch A, Pühler A, Kalinowski J (2005)
The transcriptional regulator SsuR activates expression of the Corynebacterium glutamicum sulphonate utilization genes in the absence of sulphate.
Mol Microbiol 58(2): 480-494.
PUB | DOI | WoS | PubMed | Europe PMC
 
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1604877
Risse JM, Pühler A, Flaschel E (2005)
Production of N-acetyl-phosphinothricin: A substance used for inducing male sterility in transgenic plants.
ENGINEERING IN LIFE SCIENCES 5(1): 38-45.
PUB | DOI | WoS
 
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1603956
Tennstedt T, Szczepanowski R, Krahn I, Pühler A, Schlüter A (2005)
Sequence of the 68,869 bp IncP-1 alpha plasmid pTB11 from a waste-water treatment plant reveals a highly conserved backbone, a Tn402-like integron and other transposable elements.
PLASMID 53(3): 218-238.
PUB | DOI | WoS | PubMed | Europe PMC
 
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1604074
Hohnjec N, Vieweg ME, Pühler A, Becker A, Küster H (2005)
Overlaps in the transcriptional profiles of Medicago truncatula roots inoculated with two different Glomus fungi provide insights into the genetic program activated during arbuscular mycorrhiza.
Plant Physiol 137(4): 1283-1301.
PUB | DOI | WoS | PubMed | Europe PMC
 
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1601955
Silberbach M, Hüser AT, Kalinowski J, Pühler A, Walter B, Kramer R, Burkovski A (2005)
DNA microarray analysis of the nitrogen starvation response of Corynebacterium glutamicum.
JOURNAL OF BIOTECHNOLOGY 119(4): 357-367.
PUB | DOI | WoS | PubMed | Europe PMC
 
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1603317
Tauch A, Kaiser O, Hain T, Goesmann A, Weisshaar B, Albersmeier A, Bekel T, Bischoff N, Brune I, Chakraborty T, Kalinowski J, Meyer F, Rupp O, Schneiker-Bekel S, Viehöver P, Pühler A (2005)
Complete genome sequence and analysis of the multiresistant nosocomial pathogen Corynebacterium jeikeium K411, a lipid-requiring bacterium of the human skin flora.
Journal of Bacteriology 187(13): 4671-4682.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773606 OA
Brune I, Brinkrolf K, Kalinowski J, Pühler A, Tauch A (2005)
The individual and common repertoire of DNA-binding transcriptional regulators of Corynebacterium glutamicum, Corynebacterium efficiens, Corynebacterium diphtheriae and Corynebacterium jeikeium deduced from the complete genome sequences.
BMC Genomics 6(1): 86.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1601922
Firnhaber C, Pühler A, Küster H (2005)
EST sequencing and time course microarray hybridizations identify more than 700 Medicago truncatula genes with developmental expression regulation in flowers and pods.
Planta 222(2): 269-283.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1603889
Silberbach M, Schafer M, Hüser AT, Kalinowski J, Pühler A, Kramer R, Burkovski A (2005)
Adaptation of Corynebacterium glutamicum to ammonium limitation: A global analysis using transcriptome and proteome techniques.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY 71(5): 2391-2402.
PUB | DOI | WoS | PubMed | Europe PMC
 
2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1608687
Küster H, Hohnjec N, Krajinski F, El Yahyaoui F, Manthey K, Gouzy J, Dondrup M, Meyer F, Kalinowski J, Brechenmacher L, van Tuinen D, Gianinazzi-Pearson V, Pühler A, Gamas P, Becker A (2004)
Construction and validation of cDNA-based Mt6k-RIT macro- and microarrays to explore root endosymbioses in the model legume Medicago truncatula.
JOURNAL OF BIOTECHNOLOGY 108(2): 95-113.
PUB | DOI | WoS | PubMed | Europe PMC
 
2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1608839
McHardy AC, Pühler A, Kalinowski J, Meyer F (2004)
Comparing expression level-dependent features in codon usage with protein abundance: An analysis of 'predictive proteomics'.
PROTEOMICS 4(1): 46-58.
PUB | DOI | WoS | PubMed | Europe PMC
 
2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1606270
Hartmann M, Barsch A, Niehaus K, Pühler A, Tauch A, Kalinowski J (2004)
The glycosylated cell surface protein Rpf2, containing a resuscitation-promoting factor motif, is involved in intercellular communication of Corynebacterium glutamicum.
ARCHIVES OF MICROBIOLOGY 182(4): 299-312.
PUB | DOI | WoS | PubMed | Europe PMC
 
2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1605656
Szczepanowski R, Krahn I, Linke B, Goesmann A, Pühler A, Schlüter A (2004)
Antibiotic multiresistance plasmid pRSB101 isolated from a wastewater treatment plant is related to plasmids residing in phytopathogenic bacteria and carries eight different resistance determinants including a multidrug transport system.
Microbiology 150(11): 3613-3630.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1607424
McHardy AC, Goesmann A, Pühler A, Meyer F (2004)
Development of joint application strategies for two microbial gene finders.
BIOINFORMATICS 20(10): 1622-1631.
PUB | DOI | WoS | PubMed | Europe PMC
 
2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1608345
Becker A, Berges H, Krol E, Bruand C, Rüberg S, Capela D, Lauber E, Meilhoc E, Ampe F, de Bruijn FJ, Fourment J, Francez-Charlot A, Kahn D, Küster H, Liebe C, Pühler A, Weidner S, Batut J (2004)
Global changes in gene expression in Sinorhizobium meliloti 1021 under microoxic and symbiotic conditions.
MOLECULAR PLANT-MICROBE INTERACTIONS 17(3): 292-303.
PUB | DOI | WoS | PubMed | Europe PMC
 
2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1606360
von Stockar U, Pühler A (2004)
Highlights from the ECB11: building bridges between biosciences and bioengineering.
JOURNAL OF BIOTECHNOLOGY 113(1-3): 1-2.
PUB | DOI | WoS
 
2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1606500
Tauch A, Bischoff N, Pühler A, Kalinowski J (2004)
Comparative genomics identified two conserved DNA modules in a corynebacterial plasmid family present in clinical isolates of the opportunistic human pathogen Corynebacterium jeikeium.
PLASMID 52(2): 102-118.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1606644
Brzeska M, Panhorst M, Kamp P-B, Schotter J, Reiss G, Pühler A, Becker A, Brückl H (2004)
Detection and manipulation of biomolecules by magnetic carriers.
JOURNAL OF BIOTECHNOLOGY 112(1-2): 25-33.
PUB | DOI | WoS | PubMed | Europe PMC
 

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