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544 Publikationen

2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935899
López, J. L., Lozano, M. J., Lagares, A., Fabre, M. L., Draghi, W. O., Del Papa, M. F., Pistorio, M., Becker, A., Wibberg, Daniel, Schlüter, Andreas, Pühler, Alfred, Blom, J., Goesmann, A., and Lagares, A. “Codon Usage Heterogeneity in the Multipartite Prokaryote Genome. Selection-Based Coding Bias Associated with Gene Location, Expression Level, and Ancestry”. mBio 10.3 (2019): e00505-19.
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936223
Belmann, Peter, Fischer, Björn, Krüger, Jan, Procházka, Michal, Rasche, Helena, Prinz, Manuel, Hanussek, Maximilian, Lang, Martin, Bartusch, Felix, Gläßle, Benjamin, Krüger, Jens, Pühler, Alfred, and Sczyrba, Alexander. “de.NBI Cloud federation through ELIXIR AAI”. F1000Research 8 (2019): 842.
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936839
Nelkner, Johanna, Tejerizo, Gonzalo Torres, Hassa, Julia, Lin, Timo Wentong, Witte, Julian, Verwaaijen, Bart, Winkler, Anika, Bunk, Boyke, Spröer, Cathrin, Overmann, Jörg, Grosch, Rita, Pühler, Alfred, and Schlüter, Andreas. “Genetic Potential of the Biocontrol Agent Pseudomonas brassicacearum (Formerly P. trivialis) 3Re2-7 Unraveled by Genome Sequencing and Mining, Comparative Genomics and Transcriptomics”. Genes 10.8 (2019): 601.
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935923
Nelkner, Johanna, Henke, Christian, Lin, Timo Wentong, Pätzold, Wiebke, Hassa, Julia, Jaenicke, Sebastian, Grosch, Rita, Pühler, Alfred, Sczyrba, Alexander, and Schlüter, Andreas. “Effect of Long-Term Farming Practices on Agricultural Soil Microbiome Members Represented by Metagenomically Assembled Genomes (MAGs) and Their Predicted Plant-Beneficial Genes”. Genes 10.6 (2019): 424.
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936439
Schaffert, Lena, März, Camilla, Burkhardt, Lisa, Droste, Julian, Brandt, David, Busche, Tobias, Rosen, Winfried, Schneiker-Bekel, Susanne, Persicke, Marcus, Pühler, Alfred, and Kalinowski, Jörn. “Evaluation of vector systems and promoters for overexpression of the acarbose biosynthesis gene acbC in Actinoplanes sp. SE50/110”. Microbial Cell Factories 18 (2019): 114.
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2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2934570
Castellani, Lucas G., Nilsson, Juliet F., Wibberg, Daniel, Schlüter, Andreas, Pühler, Alfred, Brom, Susana, Pistorio, Mariano, and Tejerizo, Gonzalo Torres. “Insight into the structure, function and conjugative transfer of pLPU83a, an accessory plasmid of Rhizobium favelukesii LPU83”. Plasmid (2019).
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935556
Verwaaijen, Bart, Wibberg, Daniel, Winkler, Anika, Zrenner, Rita, Bednarz, Hanna, Niehaus, Karsten, Grosch, Rita, Pühler, Alfred, and Schlüter, Andreas. “A comprehensive analysis of the Lactuca sativa, L. transcriptome during different stages of the compatible interaction with Rhizoctonia solani”. Scientific Reports 9 (2019): 7221.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920160
Arnold, Walter, Grotjohann, Norbert, Pühler, Alfred, Röllke, Kerstin, and Selbitschka, Werner. “Die CeBiT ec Schülerakademie „Synthetische Biologie/Biotechnologie “– Begabtenförderung in einem zukunftsträchtigen Forschungsfeld”. ABB-Information. Jahresheft 2017 (2018).
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920169
Salto, Ileana P., Torres Tejerizo, Gonzalo, Wibberg, Daniel, Pühler, Alfred, Schlüter, Andreas, and Pistorio, Mariano. “Comparative genomic analysis of Acinetobacter spp. plasmids originating from clinical settings and environmental habitats”. Scientific Reports 8.1 (2018): 7783.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920170
Hassa, Julia, Maus, Irena, Off, Sandra, Pühler, Alfred, Scherer, Paul, Klocke, Michael, and Schlüter, Andreas. “Metagenome, metatranscriptome, and metaproteome approaches unraveled compositions and functional relationships of microbial communities residing in biogas plants”. Applied Microbiology and Biotechnology 102.12 (2018): 5045-5063.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2916929
Stolze, Yvonne, Bremges, Andreas, Maus, Irena, Pühler, Alfred, Sczyrba, Alexander, and Schlüter, Andreas. “Targeted in situ metatranscriptomics for selected taxa from mesophilic and thermophilic biogas plants”. Microbial Biotechnology 11.4 (2018): 667-679.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920168
Tomazetto, Geizecler, Hahnke, Sarah, Wibberg, Daniel, Pühler, Alfred, Klocke, Michael, and Schlüter, Andreas. “Proteiniphilum saccharofermentans str. M3/6 T isolated from a laboratory biogas reactor is versatile in polysaccharide and oligopeptide utilization as deduced from genome-based metabolic reconstructions”. Biotechnology Reports 18 (2018): e00254.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2930510
Alkhateeb, Rabeaa, Vorhölter, Frank-Jörg, Steffens, Tim, Rückert, Christian, Ortseifen, Vera, Hublik, Gerd, Niehaus, Karsten, and Pühler, Alfred. “Comparative transcription profiling of two fermentation cultures of Xanthomonas campestris pv. campestris B100 sampled in the growth and in the stationary phase”. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 102.15 (2018): 6613-6625.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920750
Maus, Irena, Rumming, Madis, Bergmann, Ingo, Heeg, Kathrin, Pohl, Marcel, Nettmann, Edith, Jaenicke, Sebastian, Blom, Jochen, Pühler, Alfred, Schlüter, Andreas, Sczyrba, Alexander, and Klocke, Michael. “Characterization of Bathyarchaeota genomes assembled from metagenomes of biofilms residing in mesophilic and thermophilic biogas reactors”. Biotechnology for Biofuels 11 (2018): 167.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920173
Wibberg, Daniel, Salto, Ileana P., Eikmeyer, Felix G., Maus, Irena, Winkler, Anika, Nordmann, Patrice, Pühler, Alfred, Poirel, Laurent, and Schlüter, Andreas. “Complete Genome Sequencing of Acinetobacter baumannii Strain K50 Discloses the Large Conjugative Plasmid pK50a Encoding Carbapenemase OXA-23 and Extended-Spectrum β-Lactamase GES-11”. Antimicrobial Agents and Chemotherapy 62.5 (2018): e00212-18.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2917037
Verwaaijen, Bart, Wibberg, Daniel, Nelkner, Johanna, Gordin, Miriam, Rupp, Oliver, Winkler, Anika, Bremges, Andreas, Blom, Jochen, Grosch, Rita, Pühler, Alfred, and Schlüter, Andreas. “Assembly of the Lactuca sativa, L. cv. Tizian draft genome sequence reveals differences within major resistance complex 1 as compared to the cv. Salinas reference genome”. JOURNAL OF BIOTECHNOLOGY 267 (2018): 12-18.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2908419
Torres Tejerizo, Gonzalo Arturo, Wibberg, Daniel, Winkler, Anika, Ormeño-Orrillo, Ernesto, Martínez-Romero, Esperanza, Niehaus, Karsten, Pühler, Alfred, Kalinowski, Jörn, Lagares, Antonio, Schlüter, Andreas, and Pistorio, Mariano. “Genome Sequence of the Symbiotic Type Strain Rhizobium tibeticum CCBAU85039T”. Genome Announcements 5.4 (2017): e01513-16.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2912114
Verwaaijen, Bart, Wibberg, Daniel, Kröber, Magdalena, Winkler, Anika, Zrenner, Rita, Bednarz, Hanna, Niehaus, Karsten, Grosch, Rita, Pühler, Alfred, and Schlüter, Andreas. “The Rhizoctonia solani AG1-IB (isolate 7/3/14) transcriptome during interaction with the host plant lettuce (Lactuca sativa L.)”. PLOS ONE 12.5 (2017): e0177278.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2913116
Wolf, Timo, Droste, Julian, Gren, Tetiana, Ortseifen, Vera, Schneiker-Bekel, Susanne, Zemke, Till, Pühler, Alfred, and Kalinowski, Jörn. “The MalR type regulator AcrC is a transcriptional repressor of acarbose biosynthetic genes in Actinoplanes sp. SE50/110”. BMC Genomics 18 (2017): 562.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2915516
Maus, Irena, Bremges, Andreas, Stolze, Yvonne, Hahnke, Sarah, Cibis, Katharina G., Koeck, Daniela E., Kim, Yong S., Kreubel, Jana, Hassa, Julia, Wibberg, Daniel, Weimann, Aaron, Off, Sandra, Stantscheff, Robbin, Zverlov, Vladimir V., Schwarz, Wolfgang H., König, Helmut, Liebl, Wolfgang, Scherer, Paul, McHardy, Alice C., Sczyrba, Alexander, Klocke, Michael, Pühler, Alfred, and Schlüter, Andreas. “Genomics and prevalence of bacterial and archaeal isolates from biogas-producing microbiomes”. Biotechnology for Biofuels 10.1 (2017): 264.
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