Genome Sequencing of Musa acuminata Dwarf Cavendish Reveals a Duplication of a Large Segment of Chromosome 2
Busche M, Pucker B, Viehöver P, Weisshaar B, Stracke R (2020)
G3: Genes|Genomes|Genetics 10(1): 37-42.
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| Veröffentlicht | Englisch
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Abstract / Bemerkung
Different Musa species, subspecies, and cultivars are currently investigated to reveal their genomic diversity. Here, we compare the genome sequence of one of the commercially most important cultivars, Musa acuminata Dwarf Cavendish, against the Pahang reference genome assembly. Numerous small sequence variants were detected and the ploidy of the cultivar presented here was determined as triploid based on sequence variant frequencies. Illumina sequence data also revealed a duplication of a large segment on the long arm of chromosome 2 in the Dwarf Cavendish genome. Comparison against previously sequenced cultivars provided evidence that this duplication is unique to Dwarf Cavendish. Although no functional relevance of this duplication was identified, this example shows the potential of plants to tolerate such aneuploidies.
Stichworte
banana;
pan-genomics;
small sequence variants;
crop genome assembly
Erscheinungsjahr
2020
Zeitschriftentitel
G3: Genes|Genomes|Genetics
Band
10
Ausgabe
1
Seite(n)
37-42
ISSN
2160-1836
Page URI
https://pub.uni-bielefeld.de/record/2938807
Zitieren
Busche M, Pucker B, Viehöver P, Weisshaar B, Stracke R. Genome Sequencing of Musa acuminata Dwarf Cavendish Reveals a Duplication of a Large Segment of Chromosome 2. G3: Genes|Genomes|Genetics. 2020;10(1):37-42.
Busche, M., Pucker, B., Viehöver, P., Weisshaar, B., & Stracke, R. (2020). Genome Sequencing of Musa acuminata Dwarf Cavendish Reveals a Duplication of a Large Segment of Chromosome 2. G3: Genes|Genomes|Genetics, 10(1), 37-42. https://doi.org/10.1534/g3.119.400847
Busche, Mareike, Pucker, Boas, Viehöver, Prisca, Weisshaar, Bernd, and Stracke, Ralf. 2020. “Genome Sequencing of Musa acuminata Dwarf Cavendish Reveals a Duplication of a Large Segment of Chromosome 2”. G3: Genes|Genomes|Genetics 10 (1): 37-42.
Busche, M., Pucker, B., Viehöver, P., Weisshaar, B., and Stracke, R. (2020). Genome Sequencing of Musa acuminata Dwarf Cavendish Reveals a Duplication of a Large Segment of Chromosome 2. G3: Genes|Genomes|Genetics 10, 37-42.
Busche, M., et al., 2020. Genome Sequencing of Musa acuminata Dwarf Cavendish Reveals a Duplication of a Large Segment of Chromosome 2. G3: Genes|Genomes|Genetics, 10(1), p 37-42.
M. Busche, et al., “Genome Sequencing of Musa acuminata Dwarf Cavendish Reveals a Duplication of a Large Segment of Chromosome 2”, G3: Genes|Genomes|Genetics, vol. 10, 2020, pp. 37-42.
Busche, M., Pucker, B., Viehöver, P., Weisshaar, B., Stracke, R.: Genome Sequencing of Musa acuminata Dwarf Cavendish Reveals a Duplication of a Large Segment of Chromosome 2. G3: Genes|Genomes|Genetics. 10, 37-42 (2020).
Busche, Mareike, Pucker, Boas, Viehöver, Prisca, Weisshaar, Bernd, and Stracke, Ralf. “Genome Sequencing of Musa acuminata Dwarf Cavendish Reveals a Duplication of a Large Segment of Chromosome 2”. G3: Genes|Genomes|Genetics 10.1 (2020): 37-42.
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Zitationen in Europe PMC
Daten bereitgestellt von Europe PubMed Central.
References
Daten bereitgestellt von Europe PubMed Central.
Material in PUB:
Zitiert
Genome assemblies of Musa acuminata Dwarf Cavendish
Pucker B, Busche M, Viehöver P, Weisshaar B, Stracke R (2019)
Bielefeld University.
Pucker B, Busche M, Viehöver P, Weisshaar B, Stracke R (2019)
Bielefeld University.
Zitiert
Small sequence variants between the Musa acuminata cultivars Dwarf Cavendish and DH Pahang
Pucker B, Busche M, Viehöver P, Weisshaar B, Stracke R (2019)
Bielefeld University.
Pucker B, Busche M, Viehöver P, Weisshaar B, Stracke R (2019)
Bielefeld University.
Dissertation, die diesen PUB Eintrag enthält
Characterisation of selected enzymes and regulators involved in flavonoid biosynthesis in banana and rapeseed
Busche M (2022)
Bielefeld: Universität Bielefeld.
Busche M (2022)
Bielefeld: Universität Bielefeld.
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PMID: 31712258
PubMed | Europe PMC
Preprint: 10.1101/691923
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