PUB - Publikationen an der Universität Bielefeld

Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays.
Aryee MJ, Jaffe AE, Corrada-Bravo H, Ladd-Acosta C, Feinberg AP, Hansen KD, Irizarry RA., Bioinformatics 30(10), 2014
PMID: 24478339

[The situation of Brazilian children and adolescents with regard to mental health and violence].
de Assis SG, Avanci JQ, Pesce RP, Ximenes LF., Cien Saude Colet 14(2), 2009
PMID: 19197408

A molecular mechanism for choosing alcohol over an alternative reward.
Augier E, Barbier E, Dulman RS, Licheri V, Augier G, Domi E, Barchiesi R, Farris S, Natt D, Mayfield RD, Adermark L, Heilig M., Science 360(6395), 2018
PMID: 29930131

Association studies and gene expression analyses of the DISC1-interacting molecules, pericentrin 2 (PCNT2) and DISC1-binding zinc finger protein (DBZ), with schizophrenia and with bipolar disorder.
Anitha A, Nakamura K, Yamada K, Iwayama Y, Toyota T, Takei N, Iwata Y, Suzuki K, Sekine Y, Matsuzaki H, Kawai M, Thanseem I, Miyoshi K, Katayama T, Matsuzaki S, Baba K, Honda A, Hattori T, Shimizu S, Kumamoto N, Kikuchi M, Tohyama M, Yoshikawa T, Mori N., Am. J. Med. Genet. B Neuropsychiatr. Genet. 150B(7), 2009
PMID: 19191256

Stress-induced perinatal and transgenerational epigenetic programming of brain development and mental health.
Babenko O, Kovalchuk I, Metz GA., Neurosci Biobehav Rev 48(), 2014
PMID: 25464029

Repbase Update, a database of repetitive elements in eukaryotic genomes.
Bao W, Kojima KK, Kohany O., Mob DNA 6(), 2015
PMID: 26045719

The biology of developmental plasticity and the Predictive Adaptive Response hypothesis.
Bateson P, Gluckman P, Hanson M., J. Physiol. (Lond.) 592(11), 2014
PMID: 24882817

Prenatal stress effects in a wild, long-lived primate: predictive adaptive responses in an unpredictable environment.
Berghanel A, Heistermann M, Schulke O, Ostner J., Proc. Biol. Sci. 283(1839), 2016
PMID: 27655764

Association of FKBP5 polymorphisms and childhood abuse with risk of posttraumatic stress disorder symptoms in adults.
Binder EB, Bradley RG, Liu W, Epstein MP, Deveau TC, Mercer KB, Tang Y, Gillespie CF, Heim CM, Nemeroff CB, Schwartz AC, Cubells JF, Ressler KJ., JAMA 299(11), 2008
PMID: 18349090

Carlson M., Aboyoun P., Pages H.., 2014

A genome-wide association study of autism using the Simons Simplex Collection: Does reducing phenotypic heterogeneity in autism increase genetic homogeneity?
Chaste P, Klei L, Sanders SJ, Hus V, Murtha MT, Lowe JK, Willsey AJ, Moreno-De-Luca D, Yu TW, Fombonne E, Geschwind D, Grice DE, Ledbetter DH, Mane SM, Martin DM, Morrow EM, Walsh CA, Sutcliffe JS, Lese Martin C, Beaudet AL, Lord C, State MW, Cook EH Jr, Devlin B., Biol. Psychiatry 77(9), 2014
PMID: 25534755

Discovery of cross-reactive probes and polymorphic CpGs in the Illumina Infinium HumanMethylation450 microarray.
Chen YA, Lemire M, Choufani S, Butcher DT, Grafodatskaya D, Zanke BW, Gallinger S, Hudson TJ, Weksberg R., Epigenetics 8(2), 2013
PMID: 23314698

DNA methylation in vulnerability to post-traumatic stress in rats: evidence for the role of the post-synaptic density protein Dlgap2.
Chertkow-Deutsher Y, Cohen H, Klein E, Ben-Shachar D., Int. J. Neuropsychopharmacol. 13(3), 2009
PMID: 19793403

Disease-associated epigenetic changes in monozygotic twins discordant for schizophrenia and bipolar disorder.
Dempster EL, Pidsley R, Schalkwyk LC, Owens S, Georgiades A, Kane F, Kalidindi S, Picchioni M, Kravariti E, Toulopoulou T, Murray RM, Mill J., Hum. Mol. Genet. 20(24), 2011
PMID: 21908516

Genome-wide methylomic analysis of monozygotic twins discordant for adolescent depression.
Dempster EL, Wong CC, Lester KJ, Burrage J, Gregory AM, Mill J, Eley TC., Biol. Psychiatry 76(12), 2014
PMID: 24929637

Global health. The global prevalence of intimate partner violence against women.
Devries KM, Mak JY, Garcia-Moreno C, Petzold M, Child JC, Falder G, Lim S, Bacchus LJ, Engell RE, Rosenfeld L, Pallitto C, Vos T, Abrahams N, Watts CH., Science 340(6140), 2013
PMID: 23788730

Comparison of Beta-value and M-value methods for quantifying methylation levels by microarray analysis.
Du P, Zhang X, Huang CC, Jafari N, Kibbe WA, Hou L, Lin SM., BMC Bioinformatics 11(), 2010
PMID: 21118553

Identification of risk genes for autism spectrum disorder through copy number variation analysis in Austrian families.
Egger G, Roetzer KM, Noor A, Lionel AC, Mahmood H, Schwarzbraun T, Boright O, Mikhailov A, Marshall CR, Windpassinger C, Petek E, Scherer SW, Kaschnitz W, Vincent JB., Neurogenetics 15(2), 2014
PMID: 24643514

Burnt into memory.
Elbert T, Schauer M., Nature 419(6910), 2002
PMID: 12410289

Genome-wide copy number variation study associates metabotropic glutamate receptor gene networks with attention deficit hyperactivity disorder.
Elia J, Glessner JT, Wang K, Takahashi N, Shtir CJ, Hadley D, Sleiman PM, Zhang H, Kim CE, Robison R, Lyon GJ, Flory JH, Bradfield JP, Imielinski M, Hou C, Frackelton EC, Chiavacci RM, Sakurai T, Rabin C, Middleton FA, Thomas KA, Garris M, Mentch F, Freitag CM, Steinhausen HC, Todorov AA, Reif A, Rothenberger A, Franke B, Mick EO, Roeyers H, Buitelaar J, Lesch KP, Banaschewski T, Ebstein RP, Mulas F, Oades RD, Sergeant J, Sonuga-Barke E, Renner TJ, Romanos M, Romanos J, Warnke A, Walitza S, Meyer J, Palmason H, Seitz C, Loo SK, Smalley SL, Biederman J, Kent L, Asherson P, Anney RJ, Gaynor JW, Shaw P, Devoto M, White PS, Grant SF, Buxbaum JD, Rapoport JL, Williams NM, Nelson SF, Faraone SV, Hakonarson H., Nat. Genet. 44(1), 2011
PMID: 22138692

FKBP5 genetic variation: association with selective serotonin reuptake inhibitor treatment outcomes in major depressive disorder.
Ellsworth KA, Moon I, Eckloff BW, Fridley BL, Jenkins GD, Batzler A, Biernacka JM, Abo R, Brisbin A, Ji Y, Hebbring S, Wieben ED, Mrazek DA, Weinshilboum RM, Wang L., Pharmacogenet. Genomics 23(3), 2013
PMID: 23324805

ChromHMM: automating chromatin-state discovery and characterization.
Ernst J, Kellis M., Nat. Methods 9(3), 2012
PMID: 22373907

Deficits in GABA(B) receptor system in schizophrenia and mood disorders: a postmortem study.
Fatemi SH, Folsom TD, Thuras PD., Schizophr. Res. 128(1-3), 2011
PMID: 21303731

FARP2, HDLBP and PASK are downregulated in a patient with autism and 2q37.3 deletion syndrome.
Felder B, Radlwimmer B, Benner A, Mincheva A, Todt G, Beyer KS, Schuster C, Bolte S, Schmotzer G, Klauck SM, Poustka F, Lichter P, Poustka A., Am. J. Med. Genet. A 149A(5), 2009
PMID: 19365831

Oxytocin Pathway Genes: Evolutionary Ancient System Impacting on Human Affiliation, Sociality, and Psychopathology.
Feldman R, Monakhov M, Pratt M, Ebstein RP., Biol. Psychiatry 79(3), 2015
PMID: 26392129

Social amnesia in mice lacking the oxytocin gene.
Ferguson JN, Young LJ, Hearn EF, Matzuk MM, Insel TR, Winslow JT., Nat. Genet. 25(3), 2000
PMID: 10888874

Prenatal stress and inhibitory neuron systems: implications for neuropsychiatric disorders.
Fine R, Zhang J, Stevens HE., Mol. Psychiatry 19(6), 2014
PMID: 24751963

Foa E.., 1995

Community violence: a meta-analysis on the effect of exposure and mental health outcomes of children and adolescents.
Fowler PJ, Tompsett CJ, Braciszewski JM, Jacques-Tiura AJ, Baltes BB., Dev. Psychopathol. 21(1), 2009
PMID: 19144232

Female sticklebacks transfer information via eggs: effects of maternal experience with predators on offspring.
Giesing ER, Suski CD, Warner RE, Bell AM., Proc. Biol. Sci. 278(1712), 2010
PMID: 21068041

Reduced DNA methylation and psychopathology following endogenous hypercortisolism - a genome-wide study.
Glad CA, Andersson-Assarsson JC, Berglund P, Bergthorsdottir R, Ragnarsson O, Johannsson G., Sci Rep 7(), 2017
PMID: 28300138

The Strengths and Difficulties Questionnaire: a pilot study on the validity of the self-report version.
Goodman R, Meltzer H, Bailey V., Eur Child Adolesc Psychiatry 7(3), 1998
PMID: 9826298

Human Genomics. Sleeping dogs of the genome.
Gorbunova V, Boeke JD, Helfand SL, Sedivy JM., Science 346(6214), 2014
PMID: 25477445

The composite abuse scale: further development and assessment of reliability and validity of a multidimensional partner abuse measure in clinical settings.
Hegarty K, Fracgp , Bush R, Sheehan M., Violence Vict 20(5), 2005
PMID: 16248489

A multidimensional definition of partner abuse: development and preliminary validation of the composite abuse scale.
Hegarty K., Sheehan M., Schonfeld C.., 1999

DNA methylation age of human tissues and cell types.
Horvath S., Genome Biol. 14(10), 2013
PMID: 24138928

DNA methylation arrays as surrogate measures of cell mixture distribution.
Houseman EA, Accomando WP, Koestler DC, Christensen BC, Marsit CJ, Nelson HH, Wiencke JK, Kelsey KT., BMC Bioinformatics 13(), 2012
PMID: 22568884

Stress and the dynamic genome: Steroids, epigenetics, and the transposome.
Hunter RG, Gagnidze K, McEwen BS, Pfaff DW., Proc. Natl. Acad. Sci. U.S.A. 112(22), 2014
PMID: 25385609

Genome-wide analysis of rare copy number variations reveals PARK2 as a candidate gene for attention-deficit/hyperactivity disorder.
Jarick I, Volckmar AL, Putter C, Pechlivanis S, Nguyen TT, Dauvermann MR, Beck S, Albayrak O, Scherag S, Gilsbach S, Cichon S, Hoffmann P, Degenhardt F, Nothen MM, Schreiber S, Wichmann HE, Jockel KH, Heinrich J, Tiesler CM, Faraone SV, Walitza S, Sinzig J, Freitag C, Meyer J, Herpertz-Dahlmann B, Lehmkuhl G, Renner TJ, Warnke A, Romanos M, Lesch KP, Reif A, Schimmelmann BG, Hebebrand J, Scherag A, Hinney A., Mol. Psychiatry 19(1), 2012
PMID: 23164820

DNA methylation and healthy human aging.
Jones MJ, Goodman SJ, Kobor MS., Aging Cell 14(6), 2015
PMID: 25913071

Allele-specific FKBP5 DNA demethylation mediates gene-childhood trauma interactions.
Klengel T, Mehta D, Anacker C, Rex-Haffner M, Pruessner JC, Pariante CM, Pace TW, Mercer KB, Mayberg HS, Bradley B, Nemeroff CB, Holsboer F, Heim CM, Ressler KJ, Rein T, Binder EB., Nat. Neurosci. 16(1), 2012
PMID: 23201972

Effects of stress throughout the lifespan on the brain, behaviour and cognition.
Lupien SJ, McEwen BS, Gunnar MR, Heim C., Nat. Rev. Neurosci. 10(6), 2009
PMID: 19401723

Structural variation of chromosomes in autism spectrum disorder.
Marshall CR, Noor A, Vincent JB, Lionel AC, Feuk L, Skaug J, Shago M, Moessner R, Pinto D, Ren Y, Thiruvahindrapduram B, Fiebig A, Schreiber S, Friedman J, Ketelaars CE, Vos YJ, Ficicioglu C, Kirkpatrick S, Nicolson R, Sloman L, Summers A, Gibbons CA, Teebi A, Chitayat D, Weksberg R, Thompson A, Vardy C, Crosbie V, Luscombe S, Baatjes R, Zwaigenbaum L, Roberts W, Fernandez B, Szatmari P, Scherer SW., Am. J. Hum. Genet. 82(2), 2008
PMID: 18252227

Stress and the individual. Mechanisms leading to disease.
McEwen BS, Stellar E., Arch. Intern. Med. 153(18), 1993
PMID: 8379800

Epigenetic regulation of the glucocorticoid receptor in human brain associates with childhood abuse.
McGowan PO, Sasaki A, D'Alessio AC, Dymov S, Labonte B, Szyf M, Turecki G, Meaney MJ., Nat. Neurosci. 12(3), 2009
PMID: 19234457

Linking prenatal maternal adversity to developmental outcomes in infants: the role of epigenetic pathways.
Monk C, Spicer J, Champagne FA., Dev. Psychopathol. 24(4), 2012
PMID: 23062303

High cortisol in 5-year-old children causes loss of DNA methylation in SINE retrotransposons: a possible role for ZNF263 in stress-related diseases.
Natt D, Johansson I, Faresjo T, Ludvigsson J, Thorsell A., Clin Epigenetics 7(), 2015
PMID: 26339299

Stress-induced transposon reactivation: a mediator or an estimator of allostatic load?
Natt D, Thorsell A., Environ Epigenet 2(3), 2016
PMID: 29492295

The evolution of predictive adaptive responses in human life history.
Nettle D, Frankenhuis WE, Rickard IJ., Proc. Biol. Sci. 280(1766), 2013
PMID: 23843395

Psychological trauma and evidence for enhanced vulnerability for posttraumatic stress disorder through previous trauma among West Nile refugees.
Neuner F, Schauer M, Karunakara U, Klaschik C, Robert C, Elbert T., BMC Psychiatry 4(), 2004
PMID: 15504233

Prenatal exposure to maternal depression, neonatal methylation of human glucocorticoid receptor gene (NR3C1) and infant cortisol stress responses.
Oberlander TF, Weinberg J, Papsdorf M, Grunau R, Misri S, Devlin AM., Epigenetics 3(2), 2008
PMID: 18536531

Prenatal anxiety predicts individual differences in cortisol in pre-adolescent children.
O'Connor TG, Ben-Shlomo Y, Heron J, Golding J, Adams D, Glover V., Biol. Psychiatry 58(3), 2005
PMID: 16084841

Fetal Origins of Mental Health: The Developmental Origins of Health and Disease Hypothesis.
O'Donnell KJ, Meaney MJ., Am J Psychiatry 174(4), 2016
PMID: 27838934

Trauma, poverty and mental health among Somali and Rwandese refugees living in an African refugee settlement - an epidemiological study.
Onyut LP, Neuner F, Ertl V, Schauer E, Odenwald M, Elbert T., Confl Health 3(), 2009
PMID: 19470171

Glucocorticoid receptor gene (NR3C1) methylation processes as mediators of early adversity in stress-related disorders causality: A critical review.
Palma-Gudiel H, Cordova-Palomera A, Leza JC, Fananas L., Neurosci Biobehav Rev 55(), 2015
PMID: 26073068

Genome-wide association studies of maximum number of drinks.
Pan Y, Luo X, Liu X, Wu LY, Zhang Q, Wang L, Wang W, Zuo L, Wang KS., J Psychiatr Res 47(11), 2013
PMID: 23953852

A parental bonding instrument.
Parker G., Tupling H., Brown L.., 1979

Transgenerational impact of intimate partner violence on methylation in the promoter of the glucocorticoid receptor.
Radtke KM, Ruf M, Gunter HM, Dohrmann K, Schauer M, Meyer A, Elbert T., Transl Psychiatry 1(), 2011
PMID: 22832523

Genome-wide methylation data mirror ancestry information.
Rahmani E, Shenhav L, Schweiger R, Yousefi P, Huen K, Eskenazi B, Eng C, Huntsman S, Hu D, Galanter J, Oh SS, Waldenberger M, Strauch K, Grallert H, Meitinger T, Gieger C, Holland N, Burchard EG, Zaitlen N, Halperin E., Epigenetics Chromatin 10(), 2017
PMID: 28149326

GLINT: a user-friendly toolset for the analysis of high-throughput DNA-methylation array data.
Rahmani E, Yedidim R, Shenhav L, Schweiger R, Weissbrod O, Zaitlen N, Halperin E., Bioinformatics 33(12), 2017
PMID: 28177067

Evaluation of the Patient Health Questionnaire-9 Item for detecting major depression among adolescents.
Richardson LP, McCauley E, Grossman DC, McCarty CA, Richards J, Russo JE, Rockhill C, Katon W., Pediatrics 126(6), 2010
PMID: 21041282

Richters J., Martinez P.., 1990

limma powers differential expression analyses for RNA-sequencing and microarray studies.
Ritchie ME, Phipson B, Wu D, Hu Y, Law CW, Shi W, Smyth GK., Nucleic Acids Res. 43(7), 2015
PMID: 25605792

Transgenerational consequences of PTSD: risk factors for the mental health of children whose mothers have been exposed to the Rwandan genocide.
Roth M, Neuner F, Elbert T., Int J Ment Health Syst 8(1), 2014
PMID: 24690436

Neurobiology of resilience.
Russo SJ, Murrough JW, Han MH, Charney DS, Nestler EJ., Nat. Neurosci. 15(11), 2012
PMID: 23064380

Resilience concepts and findings: implications for family therapy.
Rutter M.., 1999

Gene-environment interplay and psychopathology: multiple varieties but real effects.
Rutter M, Moffitt TE, Caspi A., J Child Psychol Psychiatry 47(3-4), 2006
PMID: 16492258

Prescient human fetuses thrive.
Sandman CA, Davis EP, Glynn LM., Psychol Sci 23(1), 2011
PMID: 22173740

Grandmaternal stress during pregnancy and DNA methylation of the third generation: an epigenome-wide association study.
Serpeloni F, Radtke K, de Assis SG, Henning F, Natt D, Elbert T., Transl Psychiatry 7(8), 2017
PMID: 28809857

Epigenetic biomarkers of prenatal maternal stress
Serpeloni F., Radtke K., Hecker T., Elbert T.., 2016

The sensitive hare: sublethal effects of predator stress on reproduction in snowshoe hares.
Sheriff MJ, Krebs CJ, Boonstra R., J Anim Ecol 78(6), 2009
PMID: 19426257

Glucocorticoid sensitivity in mood disorders.
Spijker AT, van Rossum EF., Neuroendocrinology 95(3), 2011
PMID: 22076031

A brief measure for assessing generalized anxiety disorder: the GAD-7.
Spitzer RL, Kroenke K, Williams JB, Lowe B., Arch. Intern. Med. 166(10), 2006
PMID: 16717171

Programming of stress-related behavior and epigenetic neural gene regulation in mice offspring through maternal exposure to predator odor.
St-Cyr S, McGowan PO., Front Behav Neurosci 9(), 2015
PMID: 26082698

The University of California at Los Angeles Post-traumatic Stress Disorder Reaction Index.
Steinberg AM, Brymer MJ, Decker KB, Pynoos RS., Curr Psychiatry Rep 6(2), 2004
PMID: 15038911

Quantitation of the cellular content of saliva and buccal swab samples.
Theda C, Hwang SH, Czajko A, Loke YJ, Leong P, Craig JM., Sci Rep 8(1), 2018
PMID: 29720614

OTUD7A Regulates Neurodevelopmental Phenotypes in the 15q13.3 Microdeletion Syndrome.
Uddin M, Unda BK, Kwan V, Holzapfel NT, White SH, Chalil L, Woodbury-Smith M, Ho KS, Harward E, Murtaza N, Dave B, Pellecchia G, D'Abate L, Nalpathamkalam T, Lamoureux S, Wei J, Speevak M, Stavropoulos J, Hope KJ, Doble BW, Nielsen J, Wassman ER, Scherer SW, Singh KK., Am. J. Hum. Genet. 102(2), 2018
PMID: 29395074

Newborn genome-wide DNA methylation in association with pregnancy anxiety reveals a potential role for GABBR1.
Vangeel EB, Pishva E, Hompes T, van den Hove D, Lambrechts D, Allegaert K, Freson K, Izzi B, Claes S., Clin Epigenetics 9(), 2017
PMID: 29026448

Epigenetic Age in Male Combat-Exposed War Veterans: Associations with Posttraumatic Stress Disorder Status.
Verhoeven JE, Yang R, Wolkowitz OM, Bersani FS, Lindqvist D, Mellon SH, Yehuda R, Flory JD, Lin J, Abu-Amara D, Makotkine I, Marmar C, Jett M, Hammamieh R., Mol Neuropsychiatry 4(2), 2018
PMID: 30397597

Chromatin structure and transposable elements in organismal aging.
Wood JG, Helfand SL., Front Genet 4(), 2013
PMID: 24363663

The Lhx9 homeobox gene controls pineal gland development and prevents postnatal hydrocephalus.
Yamazaki F, Moller M, Fu C, Clokie SJ, Zykovich A, Coon SL, Klein DC, Rath MF., Brain Struct Funct 220(3), 2014
PMID: 24647753

Gene-environment interactions at the FKBP5 locus: sensitive periods, mechanisms and pleiotropism.
Zannas AS, Binder EB., Genes Brain Behav. 13(1), 2013
PMID: 24219237

Lifetime stress accelerates epigenetic aging in an urban, African American cohort: relevance of glucocorticoid signaling.
Zannas AS, Arloth J, Carrillo-Roa T, Iurato S, Roh S, Ressler KJ, Nemeroff CB, Smith AK, Bradley B, Heim C, Menke A, Lange JF, Bruckl T, Ising M, Wray NR, Erhardt A, Binder EB, Mehta D., Genome Biol. 16(), 2015
PMID: 26673150