The transcriptional landscape of polyploid wheat

Ramirez-Gonzalez RH, Borrill P, Lang D, Harrington SA, Brinton J, Venturini L, Davey M, Jacobs J, van Ex F, Pasha A, Khedikar Y, et al. (2018)
SCIENCE 361(6403): eaar6089.

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Ramirez-Gonzalez RH, Borrill P, Lang D, et al. The transcriptional landscape of polyploid wheat. SCIENCE. 2018;361(6403): eaar6089.
Ramirez-Gonzalez, R. H., Borrill, P., Lang, D., Harrington, S. A., Brinton, J., Venturini, L., Davey, M., et al. (2018). The transcriptional landscape of polyploid wheat. SCIENCE, 361(6403), eaar6089. doi:10.1126/science.aar6089
Ramirez-Gonzalez, R. H., Borrill, P., Lang, D., Harrington, S. A., Brinton, J., Venturini, L., Davey, M., Jacobs, J., van Ex, F., Pasha, A., et al. (2018). The transcriptional landscape of polyploid wheat. SCIENCE 361:eaar6089.
Ramirez-Gonzalez, R.H., et al., 2018. The transcriptional landscape of polyploid wheat. SCIENCE, 361(6403): eaar6089.
R.H. Ramirez-Gonzalez, et al., “The transcriptional landscape of polyploid wheat”, SCIENCE, vol. 361, 2018, : eaar6089.
Ramirez-Gonzalez, R.H., Borrill, P., Lang, D., Harrington, S.A., Brinton, J., Venturini, L., Davey, M., Jacobs, J., van Ex, F., Pasha, A., Khedikar, Y., Robinson, S.J., Cory, A.T., Florio, T., Concia, L., Juery, C., Schoonbeek, H., Steuernagel, B., Xiang, D., Ridout, C.J., Chalhoub, B., Mayer, K.F.X., Benhamed, M., Latrasse, D., Bendahmane, A., Wulff, B.B.H., Appels, R., Tiwari, V., Datla, R., Choulet, F., Pozniak, C.J., Provart, N.J., Sharpe, A.G., Paux, E., Spannagl, M., Bräutigam, A., Uauy, C.: The transcriptional landscape of polyploid wheat. SCIENCE. 361, : eaar6089 (2018).
Ramirez-Gonzalez, R. H., Borrill, P., Lang, D., Harrington, S. A., Brinton, J., Venturini, L., Davey, M., Jacobs, J., van Ex, F., Pasha, A., Khedikar, Y., Robinson, S. J., Cory, A. T., Florio, T., Concia, L., Juery, C., Schoonbeek, H., Steuernagel, B., Xiang, D., Ridout, C. J., Chalhoub, B., Mayer, K. F. X., Benhamed, M., Latrasse, D., Bendahmane, A., Wulff, B. B. H., Appels, R., Tiwari, V., Datla, R., Choulet, F., Pozniak, C. J., Provart, N. J., Sharpe, A. G., Paux, E., Spannagl, M., Bräutigam, Andrea, and Uauy, C. “The transcriptional landscape of polyploid wheat”. SCIENCE 361.6403 (2018): eaar6089.
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13 Zitationen in Europe PMC

Daten bereitgestellt von Europe PubMed Central.

Hotspots in the genomic architecture of field drought responses in wheat as breeding targets.
Gálvez S, Mérida-García R, Camino C, Borrill P, Abrouk M, Ramírez-González RH, Biyiklioglu S, Amil-Ruiz F, IWGSC, Dorado G, Budak H, Gonzalez-Dugo V, Zarco-Tejada PJ, Appels R, Uauy C, Hernandez P., Funct Integr Genomics 19(2), 2019
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A reductionist approach to dissecting grain weight and yield in wheat.
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A Major Root Architecture QTL Responding to Water Limitation in Durum Wheat.
Alahmad S, El Hassouni K, Bassi FM, Dinglasan E, Youssef C, Quarry G, Aksoy A, Mazzucotelli E, Juhász A, Able JA, Christopher J, Voss-Fels KP, Hickey LT., Front Plant Sci 10(), 2019
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Genome-wide identification and expression profiling of trihelix gene family under abiotic stresses in wheat.
Xiao J, Hu R, Gu T, Han J, Qiu D, Su P, Feng J, Chang J, Yang G, He G., BMC Genomics 20(1), 2019
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Insights on the Proteases Involved in Barley and Wheat Grain Germination.
Diaz-Mendoza M, Diaz I, Martinez M., Int J Mol Sci 20(9), 2019
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Shifting the limits in wheat research and breeding using a fully annotated reference genome.
International Wheat Genome Sequencing Consortium (IWGSC), IWGSC RefSeq principal investigators:, Appels R, Eversole K, Feuillet C, Keller B, Rogers J, Stein N, IWGSC whole-genome assembly principal investigators:, Pozniak CJ, Stein N, Choulet F, Distelfeld A, Eversole K, Poland J, Rogers J, Ronen G, Sharpe AG, Whole-genome sequencing and assembly:, Pozniak C, Ronen G, Stein N, Barad O, Baruch K, Choulet F, Keeble-Gagnère G, Mascher M, Sharpe AG, Ben-Zvi G, Josselin AA, Hi-C data-based scaffolding:, Stein N, Mascher M, Himmelbach A, Whole-genome assembly quality control and analyses:, Choulet F, Keeble-Gagnère G, Mascher M, Rogers J, Balfourier F, Gutierrez-Gonzalez J, Hayden M, Josselin AA, Koh C, Muehlbauer G, Pasam RK, Paux E, Pozniak CJ, Rigault P, Sharpe AG, Tibbits J, Tiwari V, Pseudomolecule assembly:, Choulet F, Keeble-Gagnère G, Mascher M, Josselin AA, Rogers J, RefSeq genome structure and gene analyses:, Spannagl M, Choulet F, Lang D, Gundlach H, Haberer G, Keeble-Gagnère G, Mayer KFX, Ormanbekova D, Paux E, Prade V, Šimková H, Wicker T, Automated annotation:, Choulet F, Spannagl M, Swarbreck D, Rimbert H, Felder M, Guilhot N, Gundlach H, Haberer G, Kaithakottil G, Keilwagen J, Lang D, Leroy P, Lux T, Mayer KFX, Twardziok S, Venturini L, Manual gene curation:, Appels R, Rimbert H, Choulet F, Juhász A, Keeble-Gagnère G, Subgenome comparative analyses:, Choulet F, Spannagl M, Lang D, Abrouk M, Haberer G, Keeble-Gagnère G, Mayer KFX, Wicker T, Transposable elements:, Choulet F, Wicker T, Gundlach H, Lang D, Spannagl M, Phylogenomic analyses:, Lang D, Spannagl M, Appels R, Fischer I, Transcriptome analyses and RNA-seq data:, Uauy C, Borrill P, Ramirez-Gonzalez RH, Appels R, Arnaud D, Chalabi S, Chalhoub B, Choulet F, Cory A, Datla R, Davey MW, Hayden M, Jacobs J, Lang D, Robinson SJ, Spannagl M, Steuernagel B, Tibbits J, Tiwari V, van Ex F, Wulff BBH, Whole-genome methylome:, Pozniak CJ, Robinson SJ, Sharpe AG, Cory A, Histone mark analyses:, Benhamed M, Paux E, Bendahmane A, Concia L, Latrasse D, BAC chromosome MTP IWGSC–Bayer Whole-Genome Profiling (WGP) tags:, Rogers J, Jacobs J, Alaux M, Appels R, Bartoš J, Bellec A, Berges H, Doležel J, Feuillet C, Frenkel Z, Gill B, Korol A, Letellier T, Olsen OA, Šimková H, Singh K, Valárik M, van der Vossen E, Vautrin S, Weining S, Chromosome LTC mapping and physical mapping quality control:, Korol A, Frenkel Z, Fahima T, Glikson V, Raats D, Rogers J, RH mapping:, Tiwari V, Gill B, Paux E, Poland J, Optical mapping:, Doležel J, Číhalíková J, Šimková H, Toegelová H, Vrána J, Recombination analyses:, Sourdille P, Darrier B, Gene family analyses:, Appels R, Spannagl M, Lang D, Fischer I, Ormanbekova D, Prade V, CBF gene family:, Barabaschi D, Cattivelli L, Dehydrin gene family:, Hernandez P, Galvez S, Budak H, NLR gene family:, Steuernagel B, Jones JDG, Witek K, Wulff BBH, Yu G, PPR gene family:, Small I, Melonek J, Zhou R, Prolamin gene family:, Juhász A, Belova T, Appels R, Olsen OA, WAK gene family:, Kanyuka K, King R, Stem solidness (SSt1) QTL team:, Nilsen K, Walkowiak S, Pozniak CJ, Cuthbert R, Datla R, Knox R, Wiebe K, Xiang D, Flowering locus C (FLC) gene team:, Rohde A, Golds T, Genome size analysis:, Doležel J, Čížková J, Tibbits J, MicroRNA and tRNA annotation:, Budak H, Akpinar BA, Biyiklioglu S, Genetic maps and mapping:, Muehlbauer G, Poland J, Gao L, Gutierrez-Gonzalez J, N'Daiye A, BAC libraries and chromosome sorting:, Doležel J, Šimková H, Číhalíková J, Kubaláková M, Šafář J, Vrána J, BAC pooling, BAC library repository, and access:, Berges H, Bellec A, Vautrin S, IWGSC sequence and data repository and access:, Alaux M, Alfama F, Adam-Blondon AF, Flores R, Guerche C, Letellier T, Loaec M, Quesneville H, Physical maps and BAC-based sequences:, 1A BAC sequencing and assembly:, Pozniak CJ, Sharpe AG, Walkowiak S, Budak H, Condie J, Ens J, Koh C, Maclachlan R, Tan Y, Wicker T, 1B BAC sequencing and assembly:, Choulet F, Paux E, Alberti A, Aury JM, Balfourier F, Barbe V, Couloux A, Cruaud C, Labadie K, Mangenot S, Wincker P, 1D, 4D, and 6D physical mapping:, Gill B, Kaur G, Luo M, Sehgal S, 2AL physical mapping:, Singh K, Chhuneja P, Gupta OP, Jindal S, Kaur P, Malik P, Sharma P, Yadav B, 2AS physical mapping:, Singh NK, Khurana J, Chaudhary C, Khurana P, Kumar V, Mahato A, Mathur S, Sevanthi A, Sharma N, Tomar RS, 2B, 2D, 4B, 5BL, and 5DL IWGSC–Bayer Whole-Genome Profiling (WGP) physical maps:, Rogers J, Jacobs J, Alaux M, Bellec A, Berges H, Doležel J, Feuillet C, Frenkel Z, Gill B, Korol A, van der Vossen E, Vautrin S, 3AL physical mapping:, Gill B, Kaur G, Luo M, Sehgal S, 3DS physical mapping and BAC sequencing and assembly:, Bartoš J, Holušová K, Plíhal O, 3DL BAC sequencing and assembly:, Clark MD, Heavens D, Kettleborough G, Wright J, 4A physical mapping, BAC sequencing, assembly, and annotation:, Valárik M, Abrouk M, Balcárková B, Holušová K, Hu Y, Luo M, 5BS BAC sequencing and assembly:, Salina E, Ravin N, Skryabin K, Beletsky A, Kadnikov V, Mardanov A, Nesterov M, Rakitin A, Sergeeva E, 6B BAC sequencing and assembly:, Handa H, Kanamori H, Katagiri S, Kobayashi F, Nasuda S, Tanaka T, Wu J, 7A physical mapping and BAC sequencing:, Appels R, Hayden M, Keeble-Gagnère G, Rigault P, Tibbits J, 7B physical mapping, BAC sequencing, and assembly:, Olsen OA, Belova T, Cattonaro F, Jiumeng M, Kugler K, Mayer KFX, Pfeifer M, Sandve S, Xun X, Zhan B, 7DS BAC sequencing and assembly:, Šimková H, Abrouk M, Batley J, Bayer PE, Edwards D, Hayashi S, Toegelová H, Tulpová Z, Visendi P, 7DL physical mapping and BAC sequencing:, Weining S, Cui L, Du X, Feng K, Nie X, Tong W, Wang L, Figures:, Borrill P, Gundlach H, Galvez S, Kaithakottil G, Lang D, Lux T, Mascher M, Ormanbekova D, Prade V, Ramirez-Gonzalez RH, Spannagl M, Stein N, Uauy C, Venturini L, Manuscript writing team:, Stein N, Appels R, Eversole K, Rogers J, Borrill P, Cattivelli L, Choulet F, Hernandez P, Kanyuka K, Lang D, Mascher M, Nilsen K, Paux E, Pozniak CJ, Ramirez-Gonzalez RH, Šimková H, Small I, Spannagl M, Swarbreck D, Uauy C., Science 361(6403), 2018
PMID: 30115783
Gene editing and mutagenesis reveal inter-cultivar differences and additivity in the contribution of TaGW2 homoeologues to grain size and weight in wheat.
Wang W, Simmonds J, Pan Q, Davidson D, He F, Battal A, Akhunova A, Trick HN, Uauy C, Akhunov E., Theor Appl Genet 131(11), 2018
PMID: 30136108
Characterization and Expression Patterns of Auxin Response Factors in Wheat.
Qiao L, Zhang W, Li X, Zhang L, Zhang X, Li X, Guo H, Ren Y, Zheng J, Chang Z., Front Plant Sci 9(), 2018
PMID: 30283490
Genome-wide identification and analysis of WD40 proteins in wheat (Triticum aestivum L.).
Hu R, Xiao J, Gu T, Yu X, Zhang Y, Chang J, Yang G, He G., BMC Genomics 19(1), 2018
PMID: 30400808
Genome-Wide Transcription During Early Wheat Meiosis Is Independent of Synapsis, Ploidy Level, and the Ph1 Locus.
Martín AC, Borrill P, Higgins J, Alabdullah A, Ramírez-González RH, Swarbreck D, Uauy C, Shaw P, Moore G., Front Plant Sci 9(), 2018
PMID: 30564262
Characterization of the Esi3/RCI2/PMP3 gene family in the Triticeae.
Brunetti SC, Arseneault MKM, Gulick PJ., BMC Genomics 19(1), 2018
PMID: 30537926

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