Systems Analysis of a Maize Leaf Developmental Gradient Redefines the Current C-4 Model and Provides Candidates for Regulation
Pick TR, Bräutigam A, Schlueter U, Denton AK, Colmsee C, Scholz U, Fahnenstich H, Pieruschka R, Rascher U, Sonnewald U, Weber APM (2011)
Plant Cell 23(12): 4208-4220.
Zeitschriftenaufsatz
| Veröffentlicht | Englisch
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Pick, Thea R.;
Bräutigam, AndreaUniBi ;
Schlueter, Urte;
Denton, Alisandra K.;
Colmsee, Christian;
Scholz, Uwe;
Fahnenstich, Holger;
Pieruschka, Roland;
Rascher, Uwe;
Sonnewald, Uwe;
Weber, Andreas P. M.
Einrichtung
Abstract / Bemerkung
We systematically analyzed a developmental gradient of the third maize (Zea mays) leaf from the point of emergence into the light to the tip in 10 continuous leaf slices to study organ development and physiological and biochemical functions. Transcriptome analysis, oxygen sensitivity of photosynthesis, and photosynthetic rate measurements showed that the maize leaf undergoes a sink-to-source transition without an intermediate phase of C-3 photosynthesis or operation of a photorespiratory carbon pump. Metabolome and transcriptome analysis, chlorophyll and protein measurements, as well as dry weight determination, showed continuous gradients for all analyzed items. The absence of binary on-off switches and regulons pointed to a morphogradient along the leaf as the determining factor of developmental stage. Analysis of transcription factors for differential expression along the leaf gradient defined a list of putative regulators orchestrating the sink-to-source transition and establishment of C-4 photosynthesis. Finally, transcriptome and metabolome analysis, as well as enzyme activity measurements, and absolute quantification of selected metabolites revised the current model of maize C-4 photosynthesis. All data sets are included within the publication to serve as a resource for maize leaf systems biology.
Erscheinungsjahr
2011
Zeitschriftentitel
Plant Cell
Band
23
Ausgabe
12
Seite(n)
4208-4220
ISSN
1040-4651
Page URI
https://pub.uni-bielefeld.de/record/2915156
Zitieren
Pick TR, Bräutigam A, Schlueter U, et al. Systems Analysis of a Maize Leaf Developmental Gradient Redefines the Current C-4 Model and Provides Candidates for Regulation. Plant Cell. 2011;23(12):4208-4220.
Pick, T. R., Bräutigam, A., Schlueter, U., Denton, A. K., Colmsee, C., Scholz, U., Fahnenstich, H., et al. (2011). Systems Analysis of a Maize Leaf Developmental Gradient Redefines the Current C-4 Model and Provides Candidates for Regulation. Plant Cell, 23(12), 4208-4220. doi:10.1105/tpc.111.090324
Pick, Thea R., Bräutigam, Andrea, Schlueter, Urte, Denton, Alisandra K., Colmsee, Christian, Scholz, Uwe, Fahnenstich, Holger, et al. 2011. “Systems Analysis of a Maize Leaf Developmental Gradient Redefines the Current C-4 Model and Provides Candidates for Regulation”. Plant Cell 23 (12): 4208-4220.
Pick, T. R., Bräutigam, A., Schlueter, U., Denton, A. K., Colmsee, C., Scholz, U., Fahnenstich, H., Pieruschka, R., Rascher, U., Sonnewald, U., et al. (2011). Systems Analysis of a Maize Leaf Developmental Gradient Redefines the Current C-4 Model and Provides Candidates for Regulation. Plant Cell 23, 4208-4220.
Pick, T.R., et al., 2011. Systems Analysis of a Maize Leaf Developmental Gradient Redefines the Current C-4 Model and Provides Candidates for Regulation. Plant Cell, 23(12), p 4208-4220.
T.R. Pick, et al., “Systems Analysis of a Maize Leaf Developmental Gradient Redefines the Current C-4 Model and Provides Candidates for Regulation”, Plant Cell, vol. 23, 2011, pp. 4208-4220.
Pick, T.R., Bräutigam, A., Schlueter, U., Denton, A.K., Colmsee, C., Scholz, U., Fahnenstich, H., Pieruschka, R., Rascher, U., Sonnewald, U., Weber, A.P.M.: Systems Analysis of a Maize Leaf Developmental Gradient Redefines the Current C-4 Model and Provides Candidates for Regulation. Plant Cell. 23, 4208-4220 (2011).
Pick, Thea R., Bräutigam, Andrea, Schlueter, Urte, Denton, Alisandra K., Colmsee, Christian, Scholz, Uwe, Fahnenstich, Holger, Pieruschka, Roland, Rascher, Uwe, Sonnewald, Uwe, and Weber, Andreas P. M. “Systems Analysis of a Maize Leaf Developmental Gradient Redefines the Current C-4 Model and Provides Candidates for Regulation”. Plant Cell 23.12 (2011): 4208-4220.
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Daten bereitgestellt von European Bioinformatics Institute (EBI)
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1 Eintrag gefunden, die diesen Artikel zitieren
E-GEOD-33861 (ARXPR: E-GEOD-33861)
Bibliography accession: E-GEOD-33861 - Gradient of the third maize leaf of a 14 day old plant
Bibliography accession: E-GEOD-33861 - Gradient of the third maize leaf of a 14 day old plant
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PMID: 16579631
Coplen TB, Brand WA, Gehre M, Groning M, Meijer HA, Toman B, Verkouteren RM., Anal. Chem. 78(7), 2006
PMID: 16579631
On the mechanism of C4 photosynthesis intermediate exchange between Kranz mesophyll and bundle sheath cells in grasses.
Sowinski P, Szczepanik J, Minchin PE., J. Exp. Bot. 59(6), 2008
PMID: 18375930
Sowinski P, Szczepanik J, Minchin PE., J. Exp. Bot. 59(6), 2008
PMID: 18375930
The developmental dynamics of the maize leaf transcriptome.
Li P, Ponnala L, Gandotra N, Wang L, Si Y, Tausta SL, Kebrom TH, Provart N, Patel R, Myers CR, Reidel EJ, Turgeon R, Liu P, Sun Q, Nelson T, Brutnell TP., Nat. Genet. 42(12), 2010
PMID: 21037569
Li P, Ponnala L, Gandotra N, Wang L, Si Y, Tausta SL, Kebrom TH, Provart N, Patel R, Myers CR, Reidel EJ, Turgeon R, Liu P, Sun Q, Nelson T, Brutnell TP., Nat. Genet. 42(12), 2010
PMID: 21037569
Regulatory metabolic networks in drought stress responses.
Seki M, Umezawa T, Urano K, Shinozaki K., Curr. Opin. Plant Biol. 10(3), 2007
PMID: 17468040
Seki M, Umezawa T, Urano K, Shinozaki K., Curr. Opin. Plant Biol. 10(3), 2007
PMID: 17468040
Plant peroxisomes respire in the light: some gaps of the photorespiratory C2 cycle have become filled--others remain.
Reumann S, Weber AP., Biochim. Biophys. Acta 1763(12), 2006
PMID: 17046077
Reumann S, Weber AP., Biochim. Biophys. Acta 1763(12), 2006
PMID: 17046077
The dicotyledonous NAD malic enzyme C4 plant Cleome gynandra displays age-dependent plasticity of C4 decarboxylation biochemistry.
Sommer M, Brautigam A, Weber AP., Plant Biol (Stuttg) 14(4), 2012
PMID: 22289126
Sommer M, Brautigam A, Weber AP., Plant Biol (Stuttg) 14(4), 2012
PMID: 22289126
Involvement of maize Dof zinc finger proteins in tissue-specific and light-regulated gene expression.
Yanagisawa S, Sheen J., Plant Cell 10(1), 1998
PMID: 9477573
Yanagisawa S, Sheen J., Plant Cell 10(1), 1998
PMID: 9477573
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ., Nucleic Acids Res. 25(17), 1997
PMID: 9254694
Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ., Nucleic Acids Res. 25(17), 1997
PMID: 9254694
The Arabidopsis Information Resource (TAIR): gene structure and function annotation.
Swarbreck D, Wilks C, Lamesch P, Berardini TZ, Garcia-Hernandez M, Foerster H, Li D, Meyer T, Muller R, Ploetz L, Radenbaugh A, Singh S, Swing V, Tissier C, Zhang P, Huala E., Nucleic Acids Res. 36(Database issue), 2007
PMID: 17986450
Swarbreck D, Wilks C, Lamesch P, Berardini TZ, Garcia-Hernandez M, Foerster H, Li D, Meyer T, Muller R, Ploetz L, Radenbaugh A, Singh S, Swing V, Tissier C, Zhang P, Huala E., Nucleic Acids Res. 36(Database issue), 2007
PMID: 17986450
The Arabidopsis mutant dct is deficient in the plastidic glutamate/malate translocator DiT2.
Renne P, Dressen U, Hebbeker U, Hille D, Flugge UI, Westhoff P, Weber AP., Plant J. 35(3), 2003
PMID: 12887583
Renne P, Dressen U, Hebbeker U, Hille D, Flugge UI, Westhoff P, Weber AP., Plant J. 35(3), 2003
PMID: 12887583
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