Shared origins of a key enzyme during the evolution of C-4 and CAM metabolism

Christin P-A, Arakaki M, Osborne CP, Bräutigam A, Sage RF, Hibberd JM, Kelly S, Covshoff S, Wong GK-S, Hancock L, Edwards EJ (2014)
Journal of Experimental Botany 65(13): 3609-3621.

Zeitschriftenaufsatz | Veröffentlicht | Englisch
 
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URN
urn:nbn:de:0070-pub-29151374
Autor*in
Christin, Pascal-Antoine; Arakaki, Monica; Osborne, Colin P.; Bräutigam, AndreaUniBi ; Sage, Rowan F.; Hibberd, Julian M.; Kelly, Steven; Covshoff, Sarah; Wong, Gane Ka-Shu; Hancock, Lillian; Edwards, Erika J.
Einrichtung
Fakultät für Biologie > Computational Biology
Abstract / Bemerkung
CAM and C-4 photosynthesis are two key plant adaptations that have evolved independently multiple times, and are especially prevalent in particular groups of plants, including the Caryophyllales. We investigate the origin of photosynthetic PEPC, a key enzyme of both the CAM and C-4 pathways. We combine phylogenetic analyses of genes encoding PEPC with analyses of RNA sequence data of Portulaca, the only plants known to perform both CAM and C-4 photosynthesis. Three distinct gene lineages encoding PEPC exist in eudicots (namely ppc-1E1, ppc-1E2 and ppc-2), one of which (ppc-1E1) was recurrently recruited for use in both CAM and C-4 photosynthesis within the Caryophyllales. This gene is present in multiple copies in the cacti and relatives, including Portulaca. The PEPC involved in the CAM and C-4 cycles of Portulaca are encoded by closely related yet distinct genes. The CAM-specific gene is similar to genes from related CAM taxa, suggesting that CAM has evolved before C-4 in these species. The similar origin of PEPC and other genes involved in the CAM and C-4 cycles highlights the shared early steps of evolutionary trajectories towards CAM and C-4, which probably diverged irreversibly only during the optimization of CAM and C-4 phenotypes.
Stichworte
C-4 photosynthesis; CAM photosynthesis; co-option; evolution; phosphoenolpyruvate carboxylase (PEPC); phylogenetics
Erscheinungsjahr
2014
Zeitschriftentitel
Journal of Experimental Botany
Band
65
Ausgabe
13
Seite(n)
3609-3621
ISSN
0022-0957
eISSN
1460-2431
Page URI
https://pub.uni-bielefeld.de/record/2915137

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Christin P-A, Arakaki M, Osborne CP, et al. Shared origins of a key enzyme during the evolution of C-4 and CAM metabolism. Journal of Experimental Botany. 2014;65(13):3609-3621.
Christin, P. - A., Arakaki, M., Osborne, C. P., Bräutigam, A., Sage, R. F., Hibberd, J. M., Kelly, S., et al. (2014). Shared origins of a key enzyme during the evolution of C-4 and CAM metabolism. Journal of Experimental Botany, 65(13), 3609-3621. doi:10.1093/jxb/eru087
Christin, Pascal-Antoine, Arakaki, Monica, Osborne, Colin P., Bräutigam, Andrea, Sage, Rowan F., Hibberd, Julian M., Kelly, Steven, et al. 2014. “Shared origins of a key enzyme during the evolution of C-4 and CAM metabolism”. Journal of Experimental Botany 65 (13): 3609-3621.
Christin, P. - A., Arakaki, M., Osborne, C. P., Bräutigam, A., Sage, R. F., Hibberd, J. M., Kelly, S., Covshoff, S., Wong, G. K. - S., Hancock, L., et al. (2014). Shared origins of a key enzyme during the evolution of C-4 and CAM metabolism. Journal of Experimental Botany 65, 3609-3621.
Christin, P.-A., et al., 2014. Shared origins of a key enzyme during the evolution of C-4 and CAM metabolism. Journal of Experimental Botany, 65(13), p 3609-3621.
P.-A. Christin, et al., “Shared origins of a key enzyme during the evolution of C-4 and CAM metabolism”, Journal of Experimental Botany, vol. 65, 2014, pp. 3609-3621.
Christin, P.-A., Arakaki, M., Osborne, C.P., Bräutigam, A., Sage, R.F., Hibberd, J.M., Kelly, S., Covshoff, S., Wong, G.K.-S., Hancock, L., Edwards, E.J.: Shared origins of a key enzyme during the evolution of C-4 and CAM metabolism. Journal of Experimental Botany. 65, 3609-3621 (2014).
Christin, Pascal-Antoine, Arakaki, Monica, Osborne, Colin P., Bräutigam, Andrea, Sage, Rowan F., Hibberd, Julian M., Kelly, Steven, Covshoff, Sarah, Wong, Gane Ka-Shu, Hancock, Lillian, and Edwards, Erika J. “Shared origins of a key enzyme during the evolution of C-4 and CAM metabolism”. Journal of Experimental Botany 65.13 (2014): 3609-3621.
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Daten bereitgestellt von Europe PubMed Central.

C4-like photosynthesis and the effects of leaf senescence on C4-like physiology in Sesuvium sesuvioides (Aizoaceae).
Bohley K, Schröder T, Kesselmeier J, Ludwig M, Kadereit G., J Exp Bot 70(5), 2019
PMID: 30689935
Altered Gene Regulatory Networks Are Associated With the Transition From C3 to Crassulacean Acid Metabolism in Erycina (Oncidiinae: Orchidaceae).
Heyduk K, Hwang M, Albert V, Silvera K, Lan T, Farr K, Chang TH, Chan MT, Winter K, Leebens-Mack J., Front Plant Sci 9(), 2018
PMID: 30745906
Crassulacean acid metabolism in the Basellaceae (Caryophyllales).
Holtum JAM, Hancock LP, Edwards EJ, Winter K., Plant Biol (Stuttg) 20(3), 2018
PMID: 29369469
Molecular evolution of key metabolic genes during transitions to C4 and CAM photosynthesis.
Goolsby EW, Moore AJ, Hancock LP, De Vos JM, Edwards EJ., Am J Bot 105(3), 2018
PMID: 29660114
Targeted Enrichment of Large Gene Families for Phylogenetic Inference: Phylogeny and Molecular Evolution of Photosynthesis Genes in the Portullugo Clade (Caryophyllales).
Moore AJ, Vos JM, Hancock LP, Goolsby E, Edwards EJ., Syst Biol 67(3), 2018
PMID: 29029339
Identification of the allosteric site for neutral amino acids in the maize C4 isozyme of phosphoenolpyruvate carboxylase: The critical role of Ser-100.
González-Segura L, Mújica-Jiménez C, Juárez-Díaz JA, Güémez-Toro R, Martinez-Castilla LP, Muñoz-Clares RA., J Biol Chem 293(26), 2018
PMID: 29743237
Some like it hot: the physiological ecology of C4 plant evolution.
Sage RF, Monson RK, Ehleringer JR, Adachi S, Pearcy RW., Oecologia 187(4), 2018
PMID: 29955992
Diel rewiring and positive selection of ancient plant proteins enabled evolution of CAM photosynthesis in Agave.
Yin H, Guo HB, Weston DJ, Borland AM, Ranjan P, Abraham PE, Jawdy SS, Wachira J, Tuskan GA, Tschaplinski TJ, Wullschleger SD, Guo H, Hettich RL, Gross SM, Wang Z, Visel A, Yang X., BMC Genomics 19(1), 2018
PMID: 30081833
A portrait of the C4 photosynthetic family on the 50th anniversary of its discovery: species number, evolutionary lineages, and Hall of Fame.
Sage RF., J Exp Bot 68(2), 2017
PMID: 28110278
Optional use of CAM photosynthesis in two C4 species, Portulaca cyclophylla and Portulaca digyna.
Holtum JAM, Hancock LP, Edwards EJ, Winter K., J Plant Physiol 214(), 2017
PMID: 28511087
Loss of the Chloroplast Transit Peptide from an Ancestral C3 Carbonic Anhydrase Is Associated with C4 Evolution in the Grass Genus Neurachne.
Clayton H, Saladié M, Rolland V, Sharwood R, Macfarlane T, Ludwig M., Plant Physiol 173(3), 2017
PMID: 28153918
Secrets of succulence.
Males J., J Exp Bot 68(9), 2017
PMID: 28369497
On the Evolutionary Origin of CAM Photosynthesis.
Bräutigam A, Schlüter U, Eisenhut M, Gowik U., Plant Physiol 174(2), 2017
PMID: 28416703
Phosphorylation of Phosphoenolpyruvate Carboxylase Is Essential for Maximal and Sustained Dark CO2 Fixation and Core Circadian Clock Operation in the Obligate Crassulacean Acid Metabolism Species Kalanchoë fedtschenkoi.
Boxall SF, Dever LV, Kneřová J, Gould PD, Hartwell J., Plant Cell 29(10), 2017
PMID: 28887405
Evolutionary history of PEPC genes in green plants: Implications for the evolution of CAM in orchids.
Deng H, Zhang LS, Zhang GQ, Zheng BQ, Liu ZJ, Wang Y., Mol Phylogenet Evol 94(pt b), 2016
PMID: 26493226
Reversible Burst of Transcriptional Changes during Induction of Crassulacean Acid Metabolism in Talinum triangulare.
Brilhaus D, Bräutigam A, Mettler-Altmann T, Winter K, Weber AP., Plant Physiol 170(1), 2016
PMID: 26530316
A portrait of the C4 photosynthetic family on the 50th anniversary of its discovery: species number, evolutionary lineages, and Hall of Fame.
Sage RF., J Exp Bot 67(14), 2016
PMID: 27053721
Emerging model systems for functional genomics analysis of Crassulacean acid metabolism.
Hartwell J, Dever LV, Boxall SF., Curr Opin Plant Biol 31(), 2016
PMID: 27082281
New Genomic Insights into "Entotheonella" Symbionts in Theonella swinhoei: Mixotrophy, Anaerobic Adaptation, Resilience, and Interaction.
Liu F, Li J, Feng G, Li Z., Front Microbiol 7(), 2016
PMID: 27610106
Photosynthetic diversity meets biodiversity: the C4 plant example.
Sage RF, Stata M., J Plant Physiol 172(), 2015
PMID: 25264020
Transgenic perturbation of the decarboxylation phase of Crassulacean acid metabolism alters physiology and metabolism but has only a small effect on growth.
Dever LV, Boxall SF, Kneřová J, Hartwell J., Plant Physiol 167(1), 2015
PMID: 25378692
Genetic enablers underlying the clustered evolutionary origins of C4 photosynthesis in angiosperms.
Christin PA, Arakaki M, Osborne CP, Edwards EJ., Mol Biol Evol 32(4), 2015
PMID: 25582594
Analysis and elucidation of phosphoenolpyruvate carboxylase in cyanobacteria.
Shylajanaciyar M, Dineshbabu G, Rajalakshmi R, Subramanian G, Prabaharan D, Uma L., Protein J 34(1), 2015
PMID: 25586080
Dissecting Molecular Evolution in the Highly Diverse Plant Clade Caryophyllales Using Transcriptome Sequencing.
Yang Y, Moore MJ, Brockington SF, Soltis DE, Wong GK, Carpenter EJ, Zhang Y, Chen L, Yan Z, Xie Y, Sage RF, Covshoff S, Hibberd JM, Nelson MN, Smith SA., Mol Biol Evol 32(8), 2015
PMID: 25837578
Crassulacean acid metabolism: a continuous or discrete trait?
Winter K, Holtum JA, Smith JA., New Phytol 208(1), 2015
PMID: 25975197
A macro-ecological perspective on crassulacean acid metabolism (CAM) photosynthesis evolution in Afro-Madagascan drylands: Eulophiinae orchids as a case study.
Bone RE, Smith JA, Arrigo N, Buerki S., New Phytol 208(2), 2015
PMID: 26192467
A roadmap for research on crassulacean acid metabolism (CAM) to enhance sustainable food and bioenergy production in a hotter, drier world.
Yang X, Cushman JC, Borland AM, Edwards EJ, Wullschleger SD, Tuskan GA, Owen NA, Griffiths H, Smith JA, De Paoli HC, Weston DJ, Cottingham R, Hartwell J, Davis SC, Silvera K, Ming R, Schlauch K, Abraham P, Stewart JR, Guo HB, Albion R, Ha J, Lim SD, Wone BW, Yim WC, Garcia T, Mayer JA, Petereit J, Nair SS, Casey E, Hettich RL, Ceusters J, Ranjan P, Palla KJ, Yin H, Reyes-García C, Andrade JL, Freschi L, Beltrán JD, Dever LV, Boxall SF, Waller J, Davies J, Bupphada P, Kadu N, Winter K, Sage RF, Aguilar CN, Schmutz J, Jenkins J, Holtum JA., New Phytol 207(3), 2015
PMID: 26153373
The pineapple genome and the evolution of CAM photosynthesis.
Ming R, VanBuren R, Wai CM, Tang H, Schatz MC, Bowers JE, Lyons E, Wang ML, Chen J, Biggers E, Zhang J, Huang L, Zhang L, Miao W, Zhang J, Ye Z, Miao C, Lin Z, Wang H, Zhou H, Yim WC, Priest HD, Zheng C, Woodhouse M, Edger PP, Guyot R, Guo HB, Guo H, Zheng G, Singh R, Sharma A, Min X, Zheng Y, Lee H, Gurtowski J, Sedlazeck FJ, Harkess A, McKain MR, Liao Z, Fang J, Liu J, Zhang X, Zhang Q, Hu W, Qin Y, Wang K, Chen LY, Shirley N, Lin YR, Liu LY, Hernandez AG, Wright CL, Bulone V, Tuskan GA, Heath K, Zee F, Moore PH, Sunkar R, Leebens-Mack JH, Mockler T, Bennetzen JL, Freeling M, Sankoff D, Paterson AH, Zhu X, Yang X, Smith JA, Cushman JC, Paull RE, Yu Q., Nat Genet 47(12), 2015
PMID: 26523774
Biocatalysis for the application of CO2 as a chemical feedstock.
Alissandratos A, Easton CJ., Beilstein J Org Chem 11(), 2015
PMID: 26734087
Phylogeny and the inference of evolutionary trajectories.
Hancock L, Edwards EJ., J Exp Bot 65(13), 2014
PMID: 24755279
Multiple isoforms of phosphoenolpyruvate carboxylase in the Orchidaceae (subtribe Oncidiinae): implications for the evolution of crassulacean acid metabolism.
Silvera K, Winter K, Rodriguez BL, Albion RL, Cushman JC., J Exp Bot 65(13), 2014
PMID: 24913627
Evolutionary bursts in Euphorbia (Euphorbiaceae) are linked with photosynthetic pathway.
Horn JW, Xi Z, Riina R, Peirson JA, Yang Y, Dorsey BL, Berry PE, Davis CC, Wurdack KJ., Evolution 68(12), 2014
PMID: 25302554

83 References

Daten bereitgestellt von Europe PubMed Central.

Contemporaneous and recent radiations of the world’s major succulent plant lineages
Arakaki M, Christin PA, Nyffeler R, Lendel A, Eggli U, Ogburn RM, Spriggs E, Moore MJ, Edwards EJ., 2011
The role of proteins in C(3) plants prior to their recruitment into the C(4) pathway.
Aubry S, Brown NJ, Hibberd JM., J. Exp. Bot. 62(9), 2011
PMID: 21321052
Kinetic properties of phosphoenolpyruvate carboxylase from c(3), c(4), and c(3)-c(4) intermediate species of flaveria (asteraceae).
Bauwe H, Chollet R., Plant Physiol. 82(3), 1986
PMID: 16665094
Phylogenomics of C(4) photosynthesis in sedges (Cyperaceae): multiple appearances and genetic convergence.
Besnard G, Muasya AM, Russier F, Roalson EH, Salamin N, Christin PA., Mol. Biol. Evol. 26(8), 2009
PMID: 19461115
Evolution of C4 phosphoenolpyruvate carboxylase in Flaveria, a conserved serine residue in the carboxyl-terminal part of the enzyme is a major determinant for C4-specific characteristics.
Blasing OE, Westhoff P, Svensson P., J. Biol. Chem. 275(36), 2000
PMID: 10871630
Synchronization of metabolic processes in plants with Crassulacean acid metabolism.
Borland AM, Taybi T., J. Exp. Bot. 55(400), 2004
PMID: 15073222
An mRNA blueprint for C4 photosynthesis derived from comparative transcriptomics of closely related C3 and C4 species.
Brautigam A, Kajala K, Wullenweber J, Sommer M, Gagneul D, Weber KL, Carr KM, Gowik U, Mass J, Lercher MJ, Westhoff P, Hibberd JM, Weber AP., Plant Physiol. 155(1), 2010
PMID: 20543093
Phylogeny of the Caryophyllales sensu lato: Revisiting hypotheses on pollination biology and perianth differentiation in the core Caryophyllales.
Brockington SamuelF, Alexandre Roolse, Ramdial Jeremy, Moore MichaelJ, Crawley Sunny, Dhingra Amit, Hilu Khidir, Soltis DouglasE, Soltis PamelaS., Int. J. Plant Sci. 170(5), 2009
PMID: IND44210538
Two independent C4 origins in Aristidoideae (Poaceae) revealed by the recruitment of distinct phosphoenolpyruvate carboxylase genes.
Christin PA, Besnard G., Am. J. Bot. 96(12), 2009
PMID: 21622339
Effect of genetic convergence on phylogenetic inference.
Christin PA, Besnard G, Edwards EJ, Salamin N., Mol. Phylogenet. Evol. 62(3), 2011
PMID: 22197805
Parallel recruitment of multiple genes into c4 photosynthesis.
Christin PA, Boxall SF, Gregory R, Edwards EJ, Hartwell J, Osborne CP., Genome Biol Evol 5(11), 2013
PMID: 24179135
Can phylogenetics identify C(4) origins and reversals?
Christin PA, Freckleton RP, Osborne CP., Trends Ecol. Evol. (Amst.) 25(7), 2010
PMID: 20605250
The recurrent assembly of C4 photosynthesis, an evolutionary tale.
Christin PA, Osborne CP., Photosyn. Res. 117(1-3), 2013
PMID: 23703454
Anatomical enablers and the evolution of C photosynthesis in grasses
Christin PA, Osborne CP, Chatelet DS, Columbus JT, Besnard G, Hodkinson TR, Garrison LM, Vorontsova MS, Edwards EJ., 2013
Complex evolutionary transitions and the significance of c(3)-c(4) intermediate forms of photosynthesis in Molluginaceae.
Christin PA, Sage TL, Edwards EJ, Ogburn RM, Khoshravesh R, Sage RF., Evolution 65(3), 2010
PMID: 20955197
C4 Photosynthesis evolved in grasses via parallel adaptive genetic changes.
Christin PA, Salamin N, Savolainen V, Duvall MR, Besnard G., Curr. Biol. 17(14), 2007
PMID: 17614282
Multiple origins of crassulacean acid metabolism and the epiphytic habit in the Neotropical family Bromeliaceae
Crayn DM, Winter K, Smith JAC., 2004
Cloning, expression, and characterization of a root-form phosphoenolpyruvate carboxylase from Zea mays: comparison with the C4-form enzyme.
Dong LY, Masuda T, Kawamura T, Hata S, Izui K., Plant Cell Physiol. 39(8), 1998
PMID: 9787461
MFSPSSMpred: identifying short disorder-to-order binding regions in disordered proteins based on contextual local evolutionary conservation.
Fang C, Noguchi T, Tominaga D, Yamana H., BMC Bioinformatics 14(), 2013
PMID: 24093637
MUSCLE: multiple sequence alignment with high accuracy and high throughput.
Edgar RC., Nucleic Acids Res. 32(5), 2004
PMID: 15034147
Is it easy to move and easy to evolve? Evolutionary accessibility and adaptation.
Edwards EJ, Donoghue MJ., J. Exp. Bot. 64(13), 2013
PMID: 23913955
Angiosperm responses to a low-CO world: CAM and C photosynthesis as parallel evolutionary trajectories
Edwards EJ, Ogburn RM., 2012
Serine 774 and amino acids 296 to 437 comprise the major C4 determinants of the C4 phosphoenolpyruvate carboxylase of Flaveria trinervia.
Engelmann S, Blasing OE, Westhoff P, Svensson P., FEBS Lett. 524(1-3), 2002
PMID: 12135733
Phosphoenolpyruvate carboxykinase in the C(4) monocot Urochloa panicoides is encoded by four differentially expressed genes.
Finnegan PM, Suzuki S, Ludwig M, Burnell JN., Plant Physiol. 120(4), 1999
PMID: 10444086
New partial sequences of phosphoenolpyruvate carboxylase as molecular phylogenetic markers.
Gehrig H, Heute V, Kluge M., Mol. Phylogenet. Evol. 20(2), 2001
PMID: 11476634
Phytozome: a comparative platform for green plant genomics.
Goodstein DM, Shu S, Howson R, Neupane R, Hayes RD, Fazo J, Mitros T, Dirks W, Hellsten U, Putnam N, Rokhsar DS., Nucleic Acids Res. 40(Database issue), 2011
PMID: 22110026
Evolution of C4 photosynthesis in the genus Flaveria: how many and which genes does it take to make C4?
Gowik U, Brautigam A, Weber KL, Weber AP, Westhoff P., Plant Cell 23(6), 2011
PMID: 21705644
Evolution of C(4) phosphoenolpyruvate carboxylase in the genus Alternanthera: gene families and the enzymatic characteristics of the C(4) isozyme and its orthologues in C(3) and C(3)/C(4) Alternantheras.
Gowik U, Engelmann S, Blasing OE, Raghavendra AS, Westhoff P., Planta 223(2), 2005
PMID: 16136331
C-phosphoenolpyruvate carboxylase
Gowik U, Westhoff P., 2011
Full-length transcriptome assembly from RNA-Seq data without a reference genome.
Grabherr MG, Haas BJ, Yassour M, Levin JZ, Thompson DA, Amit I, Adiconis X, Fan L, Raychowdhury R, Zeng Q, Chen Z, Mauceli E, Hacohen N, Gnirke A, Rhind N, di Palma F, Birren BW, Nusbaum C, Lindblad-Toh K, Friedman N, Regev A., Nat. Biotechnol. 29(7), 2011
PMID: 21572440
You’re so vein: bundle sheath physiology, phylogeny and evolution in C and C plants
Griffiths H, Weller G, Toy LMF, Dennis RJ., 2013
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood.
Guindon S, Gascuel O., Syst. Biol. 52(5), 2003
PMID: 14530136
Evolutionary physiology: the extent of C4 and CAM photosynthesis in the genera Anacampseros and Grahamia of the Portulacaceae.
Guralnick LJ, Cline A, Smith M, Sage RF., J. Exp. Bot. 59(7), 2008
PMID: 18440927
Photosynthesis and anatomical characteristics in the C-crassulacean acid metabolism-cycling plant Portulaca grandiflora
Guralnick LJ, Edwards G, Ku MSB, Hockema B, Franceschi VR., 2002
The occurrence and phylogenetics of CAM in the Portulacaceae
Guralnick LJ, Jackson M., 2001
Physiological Changes in Portulacaria afra (L.) Jacq. during a Summer Drought and Rewatering.
Guralnick LJ, Ting IP., Plant Physiol. 85(2), 1987
PMID: 16665724
Phylogeny and the inference of evolutionary trajectories.
Hancock L, Edwards EJ., J. Exp. Bot. 65(13), 2014
PMID: 24755279
C photosynthesis: a unique blend of modified biochemistry, anatomy and ultrastructure
Hatch MD., 1987
Characterization of C type leaf anatomy in grasses (Poaceae), mesophyll-bundle sheath area ratios
Hattersley PW., 1984
Posttranslational regulation of phosphoenolpyruvate carboxylase in c(4) and crassulacean Acid metabolism plants.
Jiao JA, Chollet R., Plant Physiol. 95(4), 1991
PMID: 16668131
Evaluating methods for isolating total RNA and predicting the success of sequencing phylogenetically diverse plant transcriptomes.
Johnson MT, Carpenter EJ, Tian Z, Bruskiewich R, Burris JN, Carrigan CT, Chase MW, Clarke ND, Covshoff S, Depamphilis CW, Edger PP, Goh F, Graham S, Greiner S, Hibberd JM, Jordon-Thaden I, Kutchan TM, Leebens-Mack J, Melkonian M, Miles N, Myburg H, Patterson J, Pires JC, Ralph P, Rolf M, Sage RF, Soltis D, Soltis P, Stevenson D, Stewart CN Jr, Surek B, Thomsen CJ, Villarreal JC, Wu X, Zhang Y, Deyholos MK, Wong GK., PLoS ONE 7(11), 2012
PMID: 23185583
A broader model for C₄ photosynthesis evolution in plants inferred from the goosefoot family (Chenopodiaceae s.s.).
Kadereit G, Ackerly D, Pirie MD., Proc. Biol. Sci. 279(1741), 2012
PMID: 22628474
Phylogeny of Amaranthaceae and Chenopodiaceae and the evolution of C4 photosynthesis.
Kadereit G, Borsch T, Weising K, Freitag H., Int. J. Plant Sci. 164(6), 2003
PMID: IND43665533
Evolution of CAM and C carbon-concentrating mechanisms
Keeley JE, Rundel PW., 2003
Characteristics of Crassulacean Acid Metabolism in the Succulent C(4) Dicot, Portulaca oleracea L.
Koch K, Kennedy RA., Plant Physiol. 65(2), 1980
PMID: 16661159
Crassulacean Acid Metabolism in the Succulent C(4) Dicot, Portulaca oleracea L Under Natural Environmental Conditions.
Koch KE, Kennedy RA., Plant Physiol. 69(4), 1982
PMID: 16662291
Crassulacean acid metabolism in three species of the C genus Portulaca
Kraybill AA, Martin CE., 1996
Fast gapped-read alignment with Bowtie 2.
Langmead B, Salzberg SL., Nat. Methods 9(4), 2012
PMID: 22388286
Species having C4 single-cell-type photosynthesis in the Chenopodiaceae family evolved a photosynthetic phosphoenolpyruvate carboxylase like that of Kranz-type C4 species.
Lara MV, Chuong SD, Akhani H, Andreo CS, Edwards GE., Plant Physiol. 142(2), 2006
PMID: 16920871
Induction of a Crassulacean acid like metabolism in the C(4) succulent plant, Portulaca oleracea L.: physiological and morphological changes are accompanied by specific modifications in phosphoenolpyruvate carboxylase.
Lara MV, Disante KB, Podesta FE, Andreo CS, Drincovich MF., Photosyn. Res. 77(2-3), 2003
PMID: 16228379
Induction of a crassulacean acid-like metabolism in the C succulent plant, Portulaca oleracea L.: study of enzymes involved in carbon fixation and carbohydrate metabolism
Lara MV, Drincovich MF, Andrea CS., 2004
Phosphoenolpyruvate carboxylase: structure, function, regulation and evolution
Lepiniec L, Vidal J, Chollet R, Gadal P, Cretin C., 1994
The molecular evolution of β-carbonic anhydrase in Flaveria.
Ludwig M., J. Exp. Bot. 62(9), 2011
PMID: 21406474
Changes in levels of phosphoenolpyurvate carboxylase with induction of Crassulacean acid metabolism (CAM)-like behavior in the C plant Portulaca oleracea
Mazen AMA., 1996
Changes in properties of phosphoenolpyruvate carboxylase with induction of Crassulacean Acid Metabolism (CAM) in the C plant Portulaca olearacea
Mazen AMA., 2000
Gene duplication, neofunctionalization, and the evolution of C photosynthesis
Monson RK., 2003
Functional leaf anatomy of plants with crassulacean acid metabolism
Nelson EA, Sage TL, Sage RF., 2005
How to tell the time: the regulation of phosphoenolpyruvate carboxylase in Crassulacean acid metabolism (CAM) plants.
Nimmo HG., Biochem. Soc. Trans. 31(Pt 3), 2003
PMID: 12773193
Disintegrating Portulacaceae: a new familial classification of the suborder Portulacineae (Caryophyllales) based on molecular and morphological data
Nyffeler R, Eggli U., 2010
Variations on a theme: repeated evolution of succulent life forms in the Portulacineae (Caryophyllales)
Nyffeler R, Eggli U, Ogburn M, Edwards EJ., 2008
Molecular phylogenetics of suborder Cactineae (Caryophyllales), including insights into photosynthetic diversification and historical biogeography.
Ocampo G, Columbus JT., Am. J. Bot. 97(11), 2010
PMID: 21616822
Molecular phylogenetics, historical biogeography, and chromosome number evolution of Portulaca (Portulacaceae).
Ocampo G, Columbus JT., Mol. Phylogenet. Evol. 63(1), 2011
PMID: 22210411
Evolution of leaf anatomy and photosynthetic pathways in Portulacaceae.
Ocampo G, Koteyeva NK, Voznesenskaya EV, Edwards GE, Sage TL, Sage RF, Columbus JT., Am. J. Bot. 100(12), 2013
PMID: 24259525
Repeated origin of three-dimensional leaf venation releases constraints on the evolution of succulence in plants.
Ogburn RM, Edwards EJ., Curr. Biol. 23(8), 2013
PMID: 23583553
Crassulacean acid metabolism. A curiosity in context
Osmond CB., 1978

Rambaut A, Drummond AJ., 2007
Photosynthetic and other phosphoenolpyruvate carboxylase isoforms in the single-cell, facultative C(4) system of Hydrilla verticillata.
Rao SK, Magnin NC, Reiskind JB, Bowes G., Plant Physiol. 130(2), 2002
PMID: 12376652
Kinetic analyses of recombinant isoforms of phosphoenolpyruvate carboxylase from Hydrilla verticillata leaves and the impact of substituting a C-signature serine
Rao SK, Reiskind JB, Bowes G., 2008
The evolution of inorganic carbon concentrating mechanisms in photosynthesis.
Raven JA, Cockell CS, De La Rocha CL., Philos. Trans. R. Soc. Lond., B, Biol. Sci. 363(1504), 2008
PMID: 18487130
Expression of the CAM-form of phospho(enol)pyruvate carboxylase and nucleotide sequence of a full length cDNA from Mesembryanthemum crystallinum.
Rickers J, Cushman JC, Michalowski CB, Schmitt JM, Bohnert HJ., Mol. Gen. Genet. 215(3), 1989
PMID: 2710107
MrBayes 3: Bayesian phylogenetic inference under mixed models.
Ronquist F, Huelsenbeck JP., Bioinformatics 19(12), 2003
PMID: 12912839
Environmental and evolutionary preconditions for the origin and diversification of the C photosynthetic syndrome
Sage RF., 2001
Are crassulacean acid metabolism and C photosynthesis incompatible?
Sage RF., 2002
The C(4) plant lineages of planet Earth.
Sage RF, Christin PA, Edwards EJ., J. Exp. Bot. 62(9), 2011
PMID: 21414957
Photorespiration and the evolution of C photosynthesis
Sage RF, Sage TL, Kocacinar F., 2012
Distribution of crassulacean acid metabolism in orchids of Panama: evidence of selection for weak and strong modes
Silvera K, Santiago LS, Winter K., 2005
Angiosperm phylogeny: 17 genes, 640 taxa.
Soltis DE, Smith SA, Cellinese N, Wurdack KJ, Tank DC, Brockington SF, Refulio-Rodriguez NF, Walker JB, Moore MJ, Carlsward BS, Bell CD, Latvis M, Crawley S, Black C, Diouf D, Xi Z, Rushworth CA, Gitzendanner MA, Sytsma KJ, Qiu YL, Hilu KW, Davis CC, Sanderson MJ, Beaman RS, Olmstead RG, Judd WS, Donoghue MJ, Soltis PS., Am. J. Bot. 98(4), 2011
PMID: 21613169
Evolution of C4 phosphoenolpyruvate carboxylase.
Svensson P, Blasing OE, Westhoff P., Arch. Biochem. Biophys. 414(2), 2003
PMID: 12781769
Maize C4 and non-C4 NADP-dependent malic enzymes are encoded by distinct genes derived from a plastid-localized ancestor.
Tausta SL, Coyle HM, Rothermel B, Stiefel V, Nelson T., Plant Mol. Biol. 50(4-5), 2002
PMID: 12374297
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.
Thompson JD, Higgins DG, Gibson TJ., Nucleic Acids Res. 22(22), 1994
PMID: 7984417
Revealing diversity in structural and biochemical forms of C4 photosynthesis and a C3-C4 intermediate in genus Portulaca L. (Portulacaceae).
Voznesenskaya EV, Koteyeva NK, Edwards GE, Ocampo G., J. Exp. Bot. 61(13), 2010
PMID: 20591900
PAML 4: phylogenetic analysis by maximum likelihood.
Yang Z., Mol. Biol. Evol. 24(8), 2007
PMID: 17483113
Codon-substitution models for detecting molecular adaptation at individual sites along specific lineages.
Yang Z, Nielsen R., Mol. Biol. Evol. 19(6), 2002
PMID: 12032247
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