PUB - Publikationen an der Universität Bielefeld

An engineered Streptomyces hygroscopicus aph 7" gene mediates dominant resistance against hygromycin B in Chlamydomonas reinhardtii.
Berthold P, Schmitt R, Mages W., Protist 153(4), 2002
PMID: 12627869

Reconstruction of the lipid metabolism for the microalga Monoraphidium neglectum from its genome sequence reveals characteristics suitable for biofuel production.
Bogen C, Al-Dilaimi A, Albersmeier A, Wichmann J, Grundmann M, Rupp O, Lauersen KJ, Blifernez-Klassen O, Kalinowski J, Goesmann A, Mussgnug JH, Kruse O., BMC Genomics 14(), 2013
PMID: 24373495

Identification of Monoraphidium contortum as a promising species for liquid biofuel production.
Bogen C, Klassen V, Wichmann J, La Russa M, Doebbe A, Grundmann M, Uronen P, Kruse O, Mussgnug JH., Bioresour. Technol. 133(), 2013
PMID: 23453981

Prediction and optimization of gene transfection and drug delivery by electroporation.
Canatella PJ, Prausnitz MR., Gene Ther. 8(19), 2001
PMID: 11593359

Chlamydomonas (Chlorophyceae) colony PCR.
Cao M, Fu Y, Guo Y, Pan J., Protoplasma 235(1-4), 2009
PMID: 19242652

1 – Overview of electroporation and electrofusion
Chang, 1992

2 – Structure and dynamics of electric field-induced membrane pores as revealed by rapid-freezing electron microscopy
Chang, 1992

Highly efficient expression of rabbit neutrophil peptide-1 gene in Chlorella ellipsoidea cells.
Chen Y, Wang Y, Sun Y, Zhang L, Li W., Curr. Genet. 39(5-6), 2001
PMID: 11525411

Membrane electroporation theories: a review.
Chen C, Smye SW, Robinson MP, Evans JA., Med Biol Eng Comput 44(1-2), 2006
PMID: 16929916

Biodiesel from microalgae.
Chisti Y., Biotechnol. Adv. 25(3), 2007
PMID: 17350212

Electrotransformation of Chlorella vulgaris
Chow, Plant Cell Rep. 18(), 1999

Stable nuclear transformation of the oleaginous microalga Neochloris oleoabundans by electroporation
Chungjatupornchai, J. Appl. Phycol. 28(), 2016

A new approach to express transgenes in microalgae and its use to increase the flocculation ability of Chlamydomonas reinhardtii
Díaz-Santos, J. Appl. Phycol. 28(), 2016

Transgene Expression in Microalgae-From Tools to Applications.
Doron L, Segal N, Shapira M., Front Plant Sci 7(), 2016
PMID: 27148328

What is (still not) known of the mechanism by which electroporation mediates gene transfer and expression in cells and tissues.
Escoffre JM, Portet T, Wasungu L, Teissie J, Dean D, Rols MP., Mol. Biotechnol. 41(3), 2008
PMID: 19016008

Electromediated formation of DNA complexes with cell membranes and its consequences for gene delivery.
Escoffre JM, Portet T, Favard C, Teissie J, Dean DS, Rols MP., Biochim. Biophys. Acta 1808(6), 2010
PMID: 21035428

Genomic Foundation of Starch-to-Lipid Switch in Oleaginous Chlorella spp.
Fan J, Ning K, Zeng X, Luo Y, Wang D, Hu J, Li J, Xu H, Huang J, Wan M, Wang W, Zhang D, Shen G, Run C, Liao J, Fang L, Huang S, Jing X, Su X, Wang A, Bai L, Hu Z, Xu J, Li Y., Plant Physiol. 169(4), 2015
PMID: 26486592

Establishment of an efficient genetic transformation system in Scenedesmus obliquus.
Guo SL, Zhao XQ, Tang Y, Wan C, Alam MA, Ho SH, Bai FW, Chang JS., J. Biotechnol. 163(1), 2012
PMID: 23147423

2 – Culture and storage methods
Harris, 1989

Label-free in vivo analysis of intracellular lipid droplets in the oleaginous microalga Monoraphidium neglectum by coherent Raman scattering microscopy.
Jaeger D, Pilger C, Hachmeister H, Oberlander E, Wordenweber R, Wichmann J, Mussgnug JH, Huser T, Kruse O., Sci Rep 6(), 2016
PMID: 27767024

Molecular techniques to interrogate and edit the Chlamydomonas nuclear genome.
Jinkerson RE, Jonikas MC., Plant J. 82(3), 2015
PMID: 25704665

Designer diatom episomes delivered by bacterial conjugation.
Karas BJ, Diner RE, Lefebvre SC, McQuaid J, Phillips AP, Noddings CM, Brunson JK, Valas RE, Deerinck TJ, Jablanovic J, Gillard JT, Beeri K, Ellisman MH, Glass JI, Hutchison CA 3rd, Smith HO, Venter JC, Allen AE, Dupont CL, Weyman PD., Nat Commun 6(), 2015
PMID: 25897682

High-efficiency homologous recombination in the oil-producing alga Nannochloropsis sp.
Kilian O, Benemann CS, Niyogi KK, Vick B., Proc. Natl. Acad. Sci. U.S.A. 108(52), 2011
PMID: 22123974

Cyan and yellow super fluorescent proteins with improved brightness, protein folding, and FRET Forster radius.
Kremers GJ, Goedhart J, van Munster EB, Gadella TW Jr., Biochemistry 45(21), 2006
PMID: 16716067

Targeted expression of nuclear transgenes in Chlamydomonas reinhardtii with a versatile, modular vector toolkit.
Lauersen KJ, Kruse O, Mussgnug JH., Appl. Microbiol. Biotechnol. 99(8), 2015
PMID: 25586579

An RNA interference knock-down of nitrate reductase enhances lipid biosynthesis in the diatom Phaeodactylum tricornutum.
Levitan O, Dinamarca J, Zelzion E, Gorbunov MY, Falkowski PG., Plant J. 84(5), 2015
PMID: 26473332

High-efficiency nuclear transformation of the oleaginous marine Nannochloropsis species using PCR product.
Li F, Gao D, Hu H., Biosci. Biotechnol. Biochem. 78(5), 2014
PMID: 25035984

Microalgae for biodiesel production and other applications: a review
Mata, Renew. Sustain. Energy Rev. 14(), 2010

Improvement of culture conditions and evidence for nuclear transformation by homologous recombination in a red alga, Cyanidioschyzon merolae 10D.
Minoda A, Sakagami R, Yagisawa F, Kuroiwa T, Tanaka K., Plant Cell Physiol. 45(6), 2004
PMID: 15215501

Highly efficient transformation of the diatom Phaeodactylum tricornutum by multi-pulse electroporation.
Miyahara M, Aoi M, Inoue-Kashino N, Kashino Y, Ifuku K., Biosci. Biotechnol. Biochem. 77(4), 2013
PMID: 23563551

Genetic tools and techniques for Chlamydomonas reinhardtii.
Mussgnug JH., Appl. Microbiol. Biotechnol. 99(13), 2015
PMID: 26025017

Fundamentals of electroporative delivery of drugs and genes.
Neumann E, Kakorin S, Toensing K., Bioelectrochem Bioenerg 48(1), 1999
PMID: 10228565

Genetic engineering of algal chloroplasts: progress and prospects
Purton, Russ. J. Plant Physiol. 60(), 2013

Draft genome sequence and genetic transformation of the oleaginous alga Nannochloropis gaditana.
Radakovits R, Jinkerson RE, Fuerstenberg SI, Tae H, Settlage RE, Boore JL, Posewitz MC., Nat Commun 3(), 2012
PMID: 22353717

Genetic and enzymatic basis of hygromycin B resistance in Escherichia coli.
Rao RN, Allen NE, Hobbs JN Jr, Alborn WE Jr, Kirst HA, Paschal JW., Antimicrob. Agents Chemother. 24(5), 1983
PMID: 6318654

Electropermeabilization of mammalian cells to macromolecules: control by pulse duration.
Rols MP, Teissie J., Biophys. J. 75(3), 1998
PMID: 9726943

Establishing Chlamydomonas reinhardtii as an industrial biotechnology host.
Scaife MA, Nguyen GT, Rico J, Lambert D, Helliwell KE, Smith AG., Plant J. 82(3), 2015
PMID: 25641561

An inducible artificial microRNA system for Chlamydomonas reinhardtii confirms a key role for heat shock factor 1 in regulating thermotolerance.
Schmollinger S, Strenkert D, Schroda M., Curr. Genet. 56(4), 2010
PMID: 20449593

A look back at the US Department of Energy's aquatic species program: biodiesel from algae
Sheehan, Natl. Renew. Energy Lab. Gold. 328(), 1998

High-efficiency transformation of Chlamydomonas reinhardtii by electroporation.
Shimogawara K, Fujiwara S, Grossman A, Usuda H., Genetics 148(4), 1998
PMID: 9560396

A Streptomyces rimosus aphVIII gene coding for a new type phosphotransferase provides stable antibiotic resistance to Chlamydomonas reinhardtii.
Sizova I, Fuhrmann M, Hegemann P., Gene 277(1-2), 2001
PMID: 11602359

The effect of electrical deformation forces on the electropermeabilization of erythrocyte membranes in low- and high-conductivity media.
Sukhorukov VL, Mussauer H, Zimmermann U., J. Membr. Biol. 163(3), 1998
PMID: 9625780

Functional complementation of a nitrate reductase defective mutant of a green alga Dunaliella viridis by introducing the nitrate reductase gene.
Sun Y, Gao X, Li Q, Zhang Q, Xu Z., Gene 377(), 2006
PMID: 16797881

Selective and asymmetric molecular transport across electroporated cell membranes.
Tekle E, Astumian RD, Chock PB., Proc. Natl. Acad. Sci. U.S.A. 91(24), 1994
PMID: 7972093

Sequence analysis and potentials of the native RbcS promoter in the development of an alternative eukaryotic expression system using green Microalga Ankistrodesmus convolutus.
Thanh T, Chi VT, Omar H, Abdullah MP, Napis S., Int J Mol Sci 13(3), 2012
PMID: 22489117

Genomic transformation of the picoeukaryote Ostreococcus tauri
van, J. Visualized Exp. JoVE 65(), 2012

Genome, functional gene annotation, and nuclear transformation of the heterokont oleaginous alga Nannochloropsis oceanica CCMP1779.
Vieler A, Wu G, Tsai CH, Bullard B, Cornish AJ, Harvey C, Reca IB, Thornburg C, Achawanantakun R, Buehl CJ, Campbell MS, Cavalier D, Childs KL, Clark TJ, Deshpande R, Erickson E, Armenia Ferguson A, Handee W, Kong Q, Li X, Liu B, Lundback S, Peng C, Roston RL, Sanjaya , Simpson JP, Terbush A, Warakanont J, Zauner S, Farre EM, Hegg EL, Jiang N, Kuo MH, Lu Y, Niyogi KK, Ohlrogge J, Osteryoung KW, Shachar-Hill Y, Sears BB, Sun Y, Takahashi H, Yandell M, Shiu SH, Benning C., PLoS Genet. 8(11), 2012
PMID: 23166516

RNAi-based targeted gene knockdown in the model oleaginous microalgae Nannochloropsis oceanica.
Wei L, Xin Y, Wang Q, Yang J, Hu H, Xu J., Plant J. 89(6), 2017
PMID: 28188644

High efficiency transformation by electroporation of Pichia pastoris pretreated with lithium acetate and dithiothreitol.
Wu S, Letchworth GJ., BioTechniques 36(1), 2004
PMID: 14740498

Genetic improvement of the microalga Phaeodactylum tricornutum for boosting neutral lipid accumulation.
Xue J, Niu YF, Huang T, Yang WD, Liu JS, Li HY., Metab. Eng. 27(), 2014
PMID: 25447640

Rapid transformation of Chlamydomonas reinhardtii without cell-wall removal.
Yamano T, Iguchi H, Fukuzawa H., J. Biosci. Bioeng. 115(6), 2013
PMID: 23333644

High-efficiency nuclear transformation of the diatom Phaeodactylum tricornutum by electroporation.
Zhang C, Hu H., Mar Genomics 16(), 2013
PMID: 24269346

Development of a nuclear transformation system for Oleaginous Green Alga Lobosphaera (Parietochloris) incisa and genetic complementation of a mutant strain, deficient in arachidonic acid biosynthesis.
Zorin B, Grundman O, Khozin-Goldberg I, Leu S, Shapira M, Kaye Y, Tourasse N, Vallon O, Boussiba S., PLoS ONE 9(8), 2014
PMID: 25133787