L-lysine Production by Bacillus methanolicus: Genome-Based Mutational Analysis and L-lysine Secretion Engineering

Nærdal I, Netzer R, Irla M, Krog A, Heggeset TMB, Wendisch VF, Brautaset T (2017)
Journal of Biotechnology 244: 25-33.

Zeitschriftenaufsatz | Veröffentlicht | Englisch
 
Download
Es wurden keine Dateien hochgeladen. Nur Publikationsnachweis!
DOI
Autor*in
Nærdal, Ingemar; Netzer, Roman; Irla, MartaUniBi; Krog, Anne; Heggeset, Tonje Marita Bjerkan; Wendisch, Volker F.UniBi ; Brautaset, Trygve
Einrichtung
Fakultät für Biologie > Genetik der Prokaryoten
Centrum für Biotechnologie > Graduate Center > Graduate Cluster Industrial Biotechnology
Centrum für Biotechnologie > Arbeitsgruppe V. Wendisch
Erscheinungsjahr
2017
Zeitschriftentitel
Journal of Biotechnology
Band
244
Seite(n)
25-33
ISSN
0168-1656
Page URI
https://pub.uni-bielefeld.de/record/2908286

Zitieren

Nærdal I, Netzer R, Irla M, et al. L-lysine Production by Bacillus methanolicus: Genome-Based Mutational Analysis and L-lysine Secretion Engineering. Journal of Biotechnology. 2017;244:25-33.
Nærdal, I., Netzer, R., Irla, M., Krog, A., Heggeset, T. M. B., Wendisch, V. F., & Brautaset, T. (2017). L-lysine Production by Bacillus methanolicus: Genome-Based Mutational Analysis and L-lysine Secretion Engineering. Journal of Biotechnology, 244, 25-33. doi:10.1016/j.jbiotec.2017.02.001
Nærdal, Ingemar, Netzer, Roman, Irla, Marta, Krog, Anne, Heggeset, Tonje Marita Bjerkan, Wendisch, Volker F., and Brautaset, Trygve. 2017. “L-lysine Production by Bacillus methanolicus: Genome-Based Mutational Analysis and L-lysine Secretion Engineering”. Journal of Biotechnology 244: 25-33.
Nærdal, I., Netzer, R., Irla, M., Krog, A., Heggeset, T. M. B., Wendisch, V. F., and Brautaset, T. (2017). L-lysine Production by Bacillus methanolicus: Genome-Based Mutational Analysis and L-lysine Secretion Engineering. Journal of Biotechnology 244, 25-33.
Nærdal, I., et al., 2017. L-lysine Production by Bacillus methanolicus: Genome-Based Mutational Analysis and L-lysine Secretion Engineering. Journal of Biotechnology, 244, p 25-33.
I. Nærdal, et al., “L-lysine Production by Bacillus methanolicus: Genome-Based Mutational Analysis and L-lysine Secretion Engineering”, Journal of Biotechnology, vol. 244, 2017, pp. 25-33.
Nærdal, I., Netzer, R., Irla, M., Krog, A., Heggeset, T.M.B., Wendisch, V.F., Brautaset, T.: L-lysine Production by Bacillus methanolicus: Genome-Based Mutational Analysis and L-lysine Secretion Engineering. Journal of Biotechnology. 244, 25-33 (2017).
Nærdal, Ingemar, Netzer, Roman, Irla, Marta, Krog, Anne, Heggeset, Tonje Marita Bjerkan, Wendisch, Volker F., and Brautaset, Trygve. “L-lysine Production by Bacillus methanolicus: Genome-Based Mutational Analysis and L-lysine Secretion Engineering”. Journal of Biotechnology 244 (2017): 25-33.

2 Zitationen in Europe PMC

Daten bereitgestellt von Europe PubMed Central.

Methanol-essential growth of Escherichia coli.
Meyer F, Keller P, Hartl J, Gröninger OG, Kiefer P, Vorholt JA., Nat Commun 9(1), 2018
PMID: 29666370
Enhancement of precursor amino acid supplies for improving bacitracin production by activation of branched chain amino acid transporter BrnQ and deletion of its regulator gene lrp in Bacillus licheniformis.
Zhu J, Cai D, Xu H, Liu Z, Zhang B, Wu F, Li J, Chen S., Synth Syst Biotechnol 3(4), 2018
PMID: 30417137

45 References

Daten bereitgestellt von Europe PubMed Central.

From zero to hero--design-based systems metabolic engineering of Corynebacterium glutamicum for L-lysine production.
Becker J, Zelder O, Hafner S, Schroder H, Wittmann C., Metab. Eng. 13(2), 2011
PMID: 21241816
Expression control and specificity of the basic amino acid exporter LysE of Corynebacterium glutamicum.
Bellmann A, Vrljic M, Patek M, Sahm H, Kramer R, Eggeling L., Microbiology (Reading, Engl.) 147(Pt 7), 2001
PMID: 11429454
Recombineering in Corynebacterium glutamicum combined with optical nanosensors: a general strategy for fast producer strain generation.
Binder S, Siedler S, Marienhagen J, Bott M, Eggeling L., Nucleic Acids Res. 41(12), 2013
PMID: 23630315
Trimmomatic: a flexible trimmer for Illumina sequence data.
Bolger AM, Lohse M, Usadel B., Bioinformatics 30(15), 2014
PMID: 24695404
Role of the Bacillus methanolicus citrate synthase II gene, citY, in regulating the secretion of glutamate in L-lysine-secreting mutants.
Brautaset T, Williams MD, Dillingham RD, Kaufmann C, Bennaars A, Crabbe E, Flickinger MC., Appl. Environ. Microbiol. 69(7), 2003
PMID: 12839772
Bacillus methanolicus: a candidate for industrial production of amino acids from methanol at 50 degrees C.
Brautaset T, Jakobsen OM, Josefsen KD, Flickinger MC, Ellingsen TE., Appl. Microbiol. Biotechnol. 74(1), 2007
PMID: 17216461
Bacillus methanolicus pyruvate carboxylase and homoserine dehydrogenase I and II and their roles for L-lysine production from methanol at 50 degrees C.
Brautaset T, Jakobsen OM, Degnes KF, Netzer R, Naerdal I, Krog A, Dillingham R, Flickinger MC, Ellingsen TE., Appl. Microbiol. Biotechnol. 87(3), 2010
PMID: 20372887
Bacterial amino acid transport proteins: occurrence, functions, and significance for biotechnological applications.
Burkovski A, Kramer R., Appl. Microbiol. Biotechnol. 58(3), 2001
PMID: 11935175
Integrating molecular dynamics and co-evolutionary analysis for reliable target prediction and deregulation of the allosteric inhibition of aspartokinase for amino acid production.
Chen Z, Rappert S, Sun J, Zeng AP., J. Biotechnol. 154(4), 2011
PMID: 21609739
A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff: SNPs in the genome of Drosophila melanogaster strain w1118; iso-2; iso-3.
Cingolani P, Platts A, Wang le L, Coon M, Nguyen T, Wang L, Land SJ, Lu X, Ruden DM., Fly (Austin) 6(2), 2012
PMID: 22728672
A giant market and a powerful metabolism: L-lysine provided by Corynebacterium glutamicum.
Eggeling L, Bott M., Appl. Microbiol. Biotechnol. 99(8), 2015
PMID: 25761623
New ubiquitous translocators: amino acid export by Corynebacterium glutamicum and Escherichia coli.
Eggeling L, Sahm H., Arch. Microbiol. 180(3), 2003
PMID: 12879215
Export of amino acids and other solutes
Eggeling, 2005
Nucleotide sequence, expression and transcriptional analysis of the Corynebacterium glutamicum gltA gene encoding citrate synthase.
Eikmanns BJ, Thum-Schmitz N, Eggeling L, Ludtke KU, Sahm H., Microbiology (Reading, Engl.) 140 ( Pt 8)(), 1994
PMID: 7522844
Enhancement of L-lysine production in methylotroph Methylophilus methylotrophus by introducing a mutant LysE exporter.
Gunji Y, Yasueda H., J. Biotechnol. 127(1), 2006
PMID: 16870294
Characterization of a unique mutant lysE gene, originating from Corynebacterium glutamicum, encoding a product that induces L-lysine production in Methylophilus methylotrophus.
Gunji Y, Ito H, Masaki H, Yasueda H., Biosci. Biotechnol. Biochem. 70(12), 2006
PMID: 17151474
The effect of restriction on shotgun cloning and plasmid stability in Bacillus subtilis Marburg.
Haima P, Bron S, Venema G., Mol. Gen. Genet. 209(2), 1987
PMID: 2823077
Production of l-lysine and some other amino acids by mutants of B. methanolicus
Hanson, Microb. Growth C(1) Compd. (), 1996
A leuC mutation leading to increased L-lysine production and rel-independent global expression changes in Corynebacterium glutamicum.
Hayashi M, Mizoguchi H, Ohnishi J, Mitsuhashi S, Yonetani Y, Hashimoto S, Ikeda M., Appl. Microbiol. Biotechnol. 72(4), 2006
PMID: 16944136
Genome sequence of thermotolerant Bacillus methanolicus: features and regulation related to methylotrophy and production of L-lysine and L-glutamate from methanol.
Heggeset TM, Krog A, Balzer S, Wentzel A, Ellingsen TE, Brautaset T., Appl. Environ. Microbiol. 78(15), 2012
PMID: 22610424
SOSUI: classification and secondary structure prediction system for membrane proteins.
Hirokawa T, Boon-Chieng S, Mitaku S., Bioinformatics 14(4), 1998
PMID: 9632836
A genome-based approach to create a minimally mutated Corynebacterium glutamicum strain for efficient L-lysine production.
Ikeda M, Ohnishi J, Hayashi M, Mitsuhashi S., J. Ind. Microbiol. Biotechnol. 33(7), 2006
PMID: 16506038
Complete genome sequence of Bacillus methanolicus MGA3, a thermotolerant amino acid producing methylotroph.
Irla M, Neshat A, Winkler A, Albersmeier A, Heggeset TM, Brautaset T, Kalinowski J, Wendisch VF, Ruckert C., J. Biotechnol. 188(), 2014
PMID: 25152427
Transcriptome analysis of thermophilic methylotrophic Bacillus methanolicus MGA3 using RNA-sequencing provides detailed insights into its previously uncharted transcriptional landscape.
Irla M, Neshat A, Brautaset T, Ruckert C, Kalinowski J, Wendisch VF., BMC Genomics 16(), 2015
PMID: 25758049
Genome-Based Genetic Tool Development for Bacillus methanolicus: Theta- and Rolling Circle-Replicating Plasmids for Inducible Gene Expression and Application to Methanol-Based Cadaverine Production.
Irla M, Heggeset TM, Nærdal I, Paul L, Haugen T, Le SB, Brautaset T, Wendisch VF., Front Microbiol 7(), 2016
PMID: 27713731
Upregulated transcription of plasmid and chromosomal ribulose monophosphate pathway genes is critical for methanol assimilation rate and methanol tolerance in the methylotrophic bacterium Bacillus methanolicus.
Jakobsen OM, Benichou A, Flickinger MC, Valla S, Ellingsen TE, Brautaset T., J. Bacteriol. 188(8), 2006
PMID: 16585766
Overexpression of wild-type aspartokinase increases L-lysine production in the thermotolerant methylotrophic bacterium Bacillus methanolicus.
Jakobsen OM, Brautaset T, Degnes KF, Heggeset TM, Balzer S, Flickinger MC, Valla S, Ellingsen TE., Appl. Environ. Microbiol. 75(3), 2008
PMID: 19060158
Functional characterization of key enzymes involved in L-glutamate synthesis and degradation in the thermotolerant and methylotrophic bacterium Bacillus methanolicus.
Krog A, Heggeset TM, Ellingsen TE, Brautaset T., Appl. Environ. Microbiol. 79(17), 2013
PMID: 23811508
Lysine production from methanol at 50 degrees C using Bacillus methanolicus: Modeling volume control, lysine concentration, and productivity using a three-phase continuous simulation.
Lee GH, Hur W, Bremmon CE, Flickinger MC., Biotechnol. Bioeng. 49(6), 1996
PMID: 18626859
The Sequence Alignment/Map format and SAMtools.
Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, Homer N, Marth G, Abecasis G, Durbin R; 1000 Genome Project Data Processing Subgroup., Bioinformatics 25(16), 2009
PMID: 19505943

AUTHOR UNKNOWN, 0
Roles of export genes cgmA and lysE for the production of L-arginine and L-citrulline by Corynebacterium glutamicum.
Lubitz D, Jorge JM, Perez-Garcia F, Taniguchi H, Wendisch VF., Appl. Microbiol. Biotechnol. 100(19), 2016
PMID: 27350619
Cloning and sequence analysis of the meso-diaminopimelate decarboxylase gene from Bacillus methanolicus MGA3 and comparison to other decarboxylase genes.
Mills DA, Flickinger MC., Appl. Environ. Microbiol. 59(9), 1993
PMID: 8215365
Methylotrophy in the thermophilic Bacillus methanolicus, basic insights and application for commodity production from methanol.
Muller JE, Heggeset TM, Wendisch VF, Vorholt JA, Brautaset T., Appl. Microbiol. Biotechnol. 99(2), 2014
PMID: 25431011
Analysis and manipulation of aspartate pathway genes for L-lysine overproduction from methanol by Bacillus methanolicus.
Nærdal I, Netzer R, Ellingsen TE, Brautaset T., Appl. Environ. Microbiol. 77(17), 2011
PMID: 21724876
Methanol-based cadaverine production by genetically engineered Bacillus methanolicus strains.
Naerdal I, Pfeifenschneider J, Brautaset T, Wendisch VF., Microb Biotechnol 8(2), 2015
PMID: 25644214
Structural basis for the catalytic mechanism of homoserine dehydrogenase.
Navratna V, Reddy G, Gopal B., Acta Crystallogr. D Biol. Crystallogr. 71(Pt 5), 2015
PMID: 25945586
Methylobacterium extorquens: methylotrophy and biotechnological applications.
Ochsner AM, Sonntag F, Buchhaupt M, Schrader J, Vorholt JA., Appl. Microbiol. Biotechnol. 99(2), 2014
PMID: 25432674
Transport capabilities encoded within the Bacillus subtilis genome
Saier, J. Mol. Microb. Biotechnol. 4(), 2002

Sambrook, 2001
L-lysine production at 50 degrees C by mutants of a newly isolated and characterized methylotrophic Bacillus sp.
Schendel FJ, Bremmon CE, Flickinger MC, Guettler M, Hanson RS., Appl. Environ. Microbiol. 56(4), 1990
PMID: 2111119
Changes in intracellular composition in response to hyperosmotic stress of NaCl, sucrose or glutamic acid in Brevibacterium lactofermentum and Corynebacterium glutamicum
Skjerdal, Appl. Microbiol. Biotechnol. 44(), 1996
Nucleotide sequence of the lipoamide dehydrogenase gene of Escherichia coli K12.
Stephens PE, Lewis HM, Darlison MG, Guest JR., Eur. J. Biochem. 135(3), 1983
PMID: 6352260
A new type of transporter with a new type of cellular function: L-lysine export from Corynebacterium glutamicum.
Vrljic M, Sahm H, Eggeling L., Mol. Microbiol. 22(5), 1996
PMID: 8971704
Microbial production of amino acids and derived chemicals: synthetic biology approaches to strain development.
Wendisch VF., Curr. Opin. Biotechnol. 30(), 2014
PMID: 24922334
Export

Markieren/ Markierung löschen
Markierte Publikationen

Open Data PUB

Web of Science

Dieser Datensatz im Web of Science®
Quellen

PMID: 28163092
PubMed | Europe PMC

Suchen in

Google Scholar