A High-Throughput Fluorescence Assay to Determine the Activity of Tryptophan Halogenases
Schnepel C, Minges H, Frese M, Sewald N (2016)
Angewandte Chemie International Edition 55(45): 14159-14163.
Zeitschriftenaufsatz
| Veröffentlicht | Englisch
Download
Es wurden keine Dateien hochgeladen. Nur Publikationsnachweis!
Autor*in
Einrichtung
Abstract / Bemerkung
Biocatalytic halogenation with tryptophan halogenases is hampered by severe limitations such as low activity and stability. These drawbacks can be overcome by directed evolution, but for screening large mutant libraries, a facile high-throughput method is required. Therefore, we developed a quantitative halogenase assay based on a Suzuki-Miyaura cross-coupling towards the formation of a fluorescent aryltryptophan. The technique was optimized for application in crude E.coli lysate without intermediary purification steps, and was used for quantitatively monitoring the formation of halogenated tryptophans with high specificity by facile fluorescence screening in microtiter plates. This novel screening approach was exploited to engineer a thermostable tryptophan 6-halogenase. Libraries were constructed by error-prone PCR and selected for improved thermal resistance simply by fluorogenic cross-coupling. Our method led to an enzyme variant with substantially increased thermal stability and 2.5-fold improved activity.
Stichworte
cross-coupling;
directed evolution;
halogenases;
high-throughput;
screening;
one-pot processes
Erscheinungsjahr
2016
Zeitschriftentitel
Angewandte Chemie International Edition
Band
55
Ausgabe
45
Seite(n)
14159-14163
ISSN
1433-7851
eISSN
1521-3773
Page URI
https://pub.uni-bielefeld.de/record/2907432
Zitieren
Schnepel C, Minges H, Frese M, Sewald N. A High-Throughput Fluorescence Assay to Determine the Activity of Tryptophan Halogenases. Angewandte Chemie International Edition. 2016;55(45):14159-14163.
Schnepel, C., Minges, H., Frese, M., & Sewald, N. (2016). A High-Throughput Fluorescence Assay to Determine the Activity of Tryptophan Halogenases. Angewandte Chemie International Edition, 55(45), 14159-14163. https://doi.org/10.1002/anie.201605635
Schnepel, Christian, Minges, Hannah, Frese, Marcel, and Sewald, Norbert. 2016. “A High-Throughput Fluorescence Assay to Determine the Activity of Tryptophan Halogenases”. Angewandte Chemie International Edition 55 (45): 14159-14163.
Schnepel, C., Minges, H., Frese, M., and Sewald, N. (2016). A High-Throughput Fluorescence Assay to Determine the Activity of Tryptophan Halogenases. Angewandte Chemie International Edition 55, 14159-14163.
Schnepel, C., et al., 2016. A High-Throughput Fluorescence Assay to Determine the Activity of Tryptophan Halogenases. Angewandte Chemie International Edition, 55(45), p 14159-14163.
C. Schnepel, et al., “A High-Throughput Fluorescence Assay to Determine the Activity of Tryptophan Halogenases”, Angewandte Chemie International Edition, vol. 55, 2016, pp. 14159-14163.
Schnepel, C., Minges, H., Frese, M., Sewald, N.: A High-Throughput Fluorescence Assay to Determine the Activity of Tryptophan Halogenases. Angewandte Chemie International Edition. 55, 14159-14163 (2016).
Schnepel, Christian, Minges, Hannah, Frese, Marcel, and Sewald, Norbert. “A High-Throughput Fluorescence Assay to Determine the Activity of Tryptophan Halogenases”. Angewandte Chemie International Edition 55.45 (2016): 14159-14163.
Daten bereitgestellt von European Bioinformatics Institute (EBI)
5 Zitationen in Europe PMC
Daten bereitgestellt von Europe PubMed Central.
Review: Engineering of thermostable enzymes for industrial applications.
Rigoldi F, Donini S, Redaelli A, Parisini E, Gautieri A., APL Bioeng 2(1), 2018
PMID: 31069285
Rigoldi F, Donini S, Redaelli A, Parisini E, Gautieri A., APL Bioeng 2(1), 2018
PMID: 31069285
A flavin-dependent halogenase from metagenomic analysis prefers bromination over chlorination.
Neubauer PR, Widmann C, Wibberg D, Schröder L, Frese M, Kottke T, Kalinowski J, Niemann HH, Sewald N., PLoS One 13(5), 2018
PMID: 29746521
Neubauer PR, Widmann C, Wibberg D, Schröder L, Frese M, Kottke T, Kalinowski J, Niemann HH, Sewald N., PLoS One 13(5), 2018
PMID: 29746521
Mild, Aqueous α-Arylation of Ketones: Towards New Diversification Tools for Halogenated Metabolites and Drug Molecules.
Marelli E, Renault Y, Sharma SV, Nolan SP, Goss RJ., Chemistry 23(16), 2017
PMID: 28195381
Marelli E, Renault Y, Sharma SV, Nolan SP, Goss RJ., Chemistry 23(16), 2017
PMID: 28195381
Enzymatic Halogenation: A Timely Strategy for Regioselective C-H Activation.
Schnepel C, Sewald N., Chemistry 23(50), 2017
PMID: 28464370
Schnepel C, Sewald N., Chemistry 23(50), 2017
PMID: 28464370
Living GenoChemetics by hyphenating synthetic biology and synthetic chemistry in vivo.
Sharma SV, Tong X, Pubill-Ulldemolins C, Cartmell C, Bogosyan EJA, Rackham EJ, Marelli E, Hamed RB, Goss RJM., Nat Commun 8(1), 2017
PMID: 28794415
Sharma SV, Tong X, Pubill-Ulldemolins C, Cartmell C, Bogosyan EJA, Rackham EJ, Marelli E, Hamed RB, Goss RJM., Nat Commun 8(1), 2017
PMID: 28794415
44 References
Daten bereitgestellt von Europe PubMed Central.
Enzymatic functionalization of carbon-hydrogen bonds.
Lewis JC, Coelho PS, Arnold FH., Chem Soc Rev 40(4), 2010
PMID: 21079862
Lewis JC, Coelho PS, Arnold FH., Chem Soc Rev 40(4), 2010
PMID: 21079862
Specific Enzymatic Halogenation-From the Discovery of Halogenated Enzymes to Their Applications In Vitro and In Vivo.
Weichold V, Milbredt D, van Pee KH., Angew. Chem. Int. Ed. Engl. 55(22), 2016
PMID: 27059664
Weichold V, Milbredt D, van Pee KH., Angew. Chem. Int. Ed. Engl. 55(22), 2016
PMID: 27059664
AUTHOR UNKNOWN, Angew. Chem. 128(), 2016
Purification and Partial Characterization of Tryptophan 7-Halogenase (PrnA) from Pseudomonas fluorescens This work was supported by the Deutsche Forschungsgemeinschaft (DFG) through the Graduiertenkolleg "Struktur-Eigenschafts-Beziehungen bei Heterocyclen", the Environment and Climate Research and Technology Development Programme of the European Union, the Sachsische Staatsministerium fur Umwelt und Landesentwicklung, the Max-Buchner-Stiftung, and the Fonds der Chemischen Industrie. Samples of P. fluorescens BL915DeltaORF1-4 with pPEH14(prnA) and pPEH14(prnC) were obtained from Dr. J. M. Ligon, Novartis Agribusiness Biotechnology Research, Inc., Research Triangle, NC (USA) and NADH oxidase (from Thermus thermiphilus) from Prof. Helmut Erdmann, Fachhochschule Flensburg (Germany).
Keller S, Wage T, Hohaus K, Holzer M, Eichhorn E, van Pee KH ., Angew. Chem. Int. Ed. Engl. 39(13), 2000
PMID: 10941070
Keller S, Wage T, Hohaus K, Holzer M, Eichhorn E, van Pee KH ., Angew. Chem. Int. Ed. Engl. 39(13), 2000
PMID: 10941070
AUTHOR UNKNOWN, Angew. Chem. 112(), 2000
Tryptophan 7-halogenase (PrnA) structure suggests a mechanism for regioselective chlorination.
Dong C, Flecks S, Unversucht S, Haupt C, van Pee KH, Naismith JH., Science 309(5744), 2005
PMID: 16195462
Dong C, Flecks S, Unversucht S, Haupt C, van Pee KH, Naismith JH., Science 309(5744), 2005
PMID: 16195462
Robust in vitro activity of RebF and RebH, a two-component reductase/halogenase, generating 7-chlorotryptophan during rebeccamycin biosynthesis.
Yeh E, Garneau S, Walsh CT., Proc. Natl. Acad. Sci. U.S.A. 102(11), 2005
PMID: 15743914
Yeh E, Garneau S, Walsh CT., Proc. Natl. Acad. Sci. U.S.A. 102(11), 2005
PMID: 15743914
Chlorination by a long-lived intermediate in the mechanism of flavin-dependent halogenases.
Yeh E, Blasiak LC, Koglin A, Drennan CL, Walsh CT., Biochemistry 46(5), 2007
PMID: 17260957
Yeh E, Blasiak LC, Koglin A, Drennan CL, Walsh CT., Biochemistry 46(5), 2007
PMID: 17260957
New insights into the mechanism of enzymatic chlorination of tryptophan.
Flecks S, Patallo EP, Zhu X, Ernyei AJ, Seifert G, Schneider A, Dong C, Naismith JH, van Pee KH., Angew. Chem. Int. Ed. Engl. 47(49), 2008
PMID: 18979475
Flecks S, Patallo EP, Zhu X, Ernyei AJ, Seifert G, Schneider A, Dong C, Naismith JH, van Pee KH., Angew. Chem. Int. Ed. Engl. 47(49), 2008
PMID: 18979475
AUTHOR UNKNOWN, Angew. Chem. 120(), 2008
Regioselective arene halogenation using the FAD-dependent halogenase RebH.
Payne JT, Andorfer MC, Lewis JC., Angew. Chem. Int. Ed. Engl. 52(20), 2013
PMID: 23592388
Payne JT, Andorfer MC, Lewis JC., Angew. Chem. Int. Ed. Engl. 52(20), 2013
PMID: 23592388
AUTHOR UNKNOWN, Angew. Chem. 125(), 2013
Frese, ChemCatChem 6(), 2014
Enzymatic halogenation of tryptophan on a gram scale.
Frese M, Sewald N., Angew. Chem. Int. Ed. Engl. 54(1), 2014
PMID: 25394328
Frese M, Sewald N., Angew. Chem. Int. Ed. Engl. 54(1), 2014
PMID: 25394328
AUTHOR UNKNOWN, Angew. Chem. 127(), 2015
Improving the stability and catalyst lifetime of the halogenase RebH by directed evolution.
Poor CB, Andorfer MC, Lewis JC., Chembiochem 15(9), 2014
PMID: 24849696
Poor CB, Andorfer MC, Lewis JC., Chembiochem 15(9), 2014
PMID: 24849696
Directed evolution of RebH for site-selective halogenation of large biologically active molecules.
Payne JT, Poor CB, Lewis JC., Angew. Chem. Int. Ed. Engl. 54(14), 2015
PMID: 25678465
Payne JT, Poor CB, Lewis JC., Angew. Chem. Int. Ed. Engl. 54(14), 2015
PMID: 25678465
AUTHOR UNKNOWN, Angew. Chem. 127(), 2015
Shepherd, Chem. Sci. 6(), 2015
A high-throughput-screening method for determining the synthetic activity of hydrolases.
Konarzycka-Bessler M, Bornscheuer UT., Angew. Chem. Int. Ed. Engl. 42(12), 2003
PMID: 12671985
Konarzycka-Bessler M, Bornscheuer UT., Angew. Chem. Int. Ed. Engl. 42(12), 2003
PMID: 12671985
AUTHOR UNKNOWN, Angew. Chem. 115(), 2003
A combination of in vivo selection and cell sorting for the identification of enantioselective biocatalysts.
Fernandez-Alvaro E, Snajdrova R, Jochens H, Davids T, Bottcher D, Bornscheuer UT., Angew. Chem. Int. Ed. Engl. 50(37), 2011
PMID: 21815232
Fernandez-Alvaro E, Snajdrova R, Jochens H, Davids T, Bottcher D, Bornscheuer UT., Angew. Chem. Int. Ed. Engl. 50(37), 2011
PMID: 21815232
AUTHOR UNKNOWN, Angew. Chem. 123(), 2011
Willies, Tetrahedron 68(), 2012
High-throughput screening for terpene-synthase-cyclization activity and directed evolution of a terpene synthase.
Lauchli R, Rabe KS, Kalbarczyk KZ, Tata A, Heel T, Kitto RZ, Arnold FH., Angew. Chem. Int. Ed. Engl. 52(21), 2013
PMID: 23532864
Lauchli R, Rabe KS, Kalbarczyk KZ, Tata A, Heel T, Kitto RZ, Arnold FH., Angew. Chem. Int. Ed. Engl. 52(21), 2013
PMID: 23532864
AUTHOR UNKNOWN, Angew. Chem. 125(), 2013
Glycine oxidase based high-throughput solid-phase assay for substrate profiling and directed evolution of (R)- and (S)-selective amine transaminases.
Weiß MS, Pavlidis IV, Vickers C, Hohne M, Bornscheuer UT., Anal. Chem. 86(23), 2014
PMID: 25321325
Weiß MS, Pavlidis IV, Vickers C, Hohne M, Bornscheuer UT., Anal. Chem. 86(23), 2014
PMID: 25321325
A high-throughput assay for arylamine halogenation based on a peroxidase-mediated quinone-amine coupling with applications in the screening of enzymatic halogenations.
Hosford J, Shepherd SA, Micklefield J, Wong LS., Chemistry 20(50), 2014
PMID: 25319801
Hosford J, Shepherd SA, Micklefield J, Wong LS., Chemistry 20(50), 2014
PMID: 25319801
Directed Evolution of RebH for Catalyst-Controlled Halogenation of Indole C-H Bonds.
Andorfer MC, Park HJ, Vergara-Coll J, Lewis JC., Chem Sci 7(6), 2016
PMID: 27347367
Andorfer MC, Park HJ, Vergara-Coll J, Lewis JC., Chem Sci 7(6), 2016
PMID: 27347367
Palladium-mediated cell-surface labeling.
Spicer CD, Triemer T, Davis BG., J. Am. Chem. Soc. 134(2), 2011
PMID: 22175226
Spicer CD, Triemer T, Davis BG., J. Am. Chem. Soc. 134(2), 2011
PMID: 22175226
Self-liganded Suzuki-Miyaura coupling for site-selective protein PEGylation.
Dumas A, Spicer CD, Gao Z, Takehana T, Lin YA, Yasukohchi T, Davis BG., Angew. Chem. Int. Ed. Engl. 52(14), 2013
PMID: 23440916
Dumas A, Spicer CD, Gao Z, Takehana T, Lin YA, Yasukohchi T, Davis BG., Angew. Chem. Int. Ed. Engl. 52(14), 2013
PMID: 23440916
AUTHOR UNKNOWN, Angew. Chem. 125(), 2013
Development of fluorescent aryltryptophans by Pd mediated cross-coupling of unprotected halotryptophans in water.
Roy AD, Goss RJ, Wagner GK, Winn M., Chem. Commun. (Camb.) (39), 2008
PMID: 18830508
Roy AD, Goss RJ, Wagner GK, Winn M., Chem. Commun. (Camb.) (39), 2008
PMID: 18830508
Miyaura, Synth. Commun. 11(), 1981
Gene expression enabling synthetic diversification of natural products: chemogenetic generation of pacidamycin analogs.
Deb Roy A, Gruschow S, Cairns N, Goss RJ., J. Am. Chem. Soc. 132(35), 2010
PMID: 20712319
Deb Roy A, Gruschow S, Cairns N, Goss RJ., J. Am. Chem. Soc. 132(35), 2010
PMID: 20712319
Diversification of monoterpene indole alkaloid analogs through cross-coupling.
Runguphan W, O'Connor SE., Org. Lett. 15(11), 2013
PMID: 23713451
Runguphan W, O'Connor SE., Org. Lett. 15(11), 2013
PMID: 23713451
Frese, ChemCatChem 8(), 2016
Late-Stage Diversification of Biologically Active Molecules via Chemoenzymatic C-H Functionalization.
Durak LJ, Payne JT, Lewis JC., ACS Catal 6(3), 2016
PMID: 27274902
Durak LJ, Payne JT, Lewis JC., ACS Catal 6(3), 2016
PMID: 27274902
Integrated catalysis opens new arylation pathways via regiodivergent enzymatic C-H activation.
Latham J, Henry JM, Sharif HH, Menon BR, Shepherd SA, Greaney MF, Micklefield J., Nat Commun 7(), 2016
PMID: 27283121
Latham J, Henry JM, Sharif HH, Menon BR, Shepherd SA, Greaney MF, Micklefield J., Nat Commun 7(), 2016
PMID: 27283121
Catalysts for Suzuki-Miyaura coupling processes: scope and studies of the effect of ligand structure.
Barder TE, Walker SD, Martinelli JR, Buchwald SL., J. Am. Chem. Soc. 127(13), 2005
PMID: 15796535
Barder TE, Walker SD, Martinelli JR, Buchwald SL., J. Am. Chem. Soc. 127(13), 2005
PMID: 15796535
A highly active catalyst for Suzuki-Miyaura cross-coupling reactions of heteroaryl compounds.
Billingsley KL, Anderson KW, Buchwald SL., Angew. Chem. Int. Ed. Engl. 45(21), 2006
PMID: 16639772
Billingsley KL, Anderson KW, Buchwald SL., Angew. Chem. Int. Ed. Engl. 45(21), 2006
PMID: 16639772
AUTHOR UNKNOWN, Angew. Chem. 118(), 2006
A regioselective tryptophan 5-halogenase is involved in pyrroindomycin biosynthesis in Streptomyces rugosporus LL-42D005.
Zehner S, Kotzsch A, Bister B, Sussmuth RD, Mendez C, Salas JA, van Pee KH., Chem. Biol. 12(4), 2005
PMID: 15850981
Zehner S, Kotzsch A, Bister B, Sussmuth RD, Mendez C, Salas JA, van Pee KH., Chem. Biol. 12(4), 2005
PMID: 15850981
Seibold, Biocatal. Biotransform. 24(), 2006
Material in PUB:
Teil dieser Dissertation
Biocatalytic Aryl Functionalization Using Flavin-Dependent Halogenases. Enzyme Engineering and Chemoenzymatic Cascades
Schnepel C (2019)
Bielefeld: Universität Bielefeld.
Schnepel C (2019)
Bielefeld: Universität Bielefeld.
Export
Markieren/ Markierung löschen
Markierte Publikationen
Web of Science
Dieser Datensatz im Web of Science®Quellen
PMID: 27618794
PubMed | Europe PMC
Suchen in