Structure of a Native-like Aureochrome 1a LOV Domain Dimer from Phaeodactylum tricornutum
Banerjee A, Herman E, Kottke T, Essen L-O (2016)
Structure 24(1): 171-178.
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Erscheinungsjahr
2016
Zeitschriftentitel
Structure
Band
24
Ausgabe
1
Seite(n)
171-178
ISSN
0969-2126
eISSN
1878-4186
Page URI
https://pub.uni-bielefeld.de/record/2901407
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Banerjee A, Herman E, Kottke T, Essen L-O. Structure of a Native-like Aureochrome 1a LOV Domain Dimer from Phaeodactylum tricornutum. Structure. 2016;24(1):171-178.
Banerjee, A., Herman, E., Kottke, T., & Essen, L. - O. (2016). Structure of a Native-like Aureochrome 1a LOV Domain Dimer from Phaeodactylum tricornutum. Structure, 24(1), 171-178. doi:10.1016/j.str.2015.10.022
Banerjee, Ankan, Herman, Elena, Kottke, Tilman, and Essen, Lars-Oliver. 2016. “Structure of a Native-like Aureochrome 1a LOV Domain Dimer from Phaeodactylum tricornutum”. Structure 24 (1): 171-178.
Banerjee, A., Herman, E., Kottke, T., and Essen, L. - O. (2016). Structure of a Native-like Aureochrome 1a LOV Domain Dimer from Phaeodactylum tricornutum. Structure 24, 171-178.
Banerjee, A., et al., 2016. Structure of a Native-like Aureochrome 1a LOV Domain Dimer from Phaeodactylum tricornutum. Structure, 24(1), p 171-178.
A. Banerjee, et al., “Structure of a Native-like Aureochrome 1a LOV Domain Dimer from Phaeodactylum tricornutum”, Structure, vol. 24, 2016, pp. 171-178.
Banerjee, A., Herman, E., Kottke, T., Essen, L.-O.: Structure of a Native-like Aureochrome 1a LOV Domain Dimer from Phaeodactylum tricornutum. Structure. 24, 171-178 (2016).
Banerjee, Ankan, Herman, Elena, Kottke, Tilman, and Essen, Lars-Oliver. “Structure of a Native-like Aureochrome 1a LOV Domain Dimer from Phaeodactylum tricornutum”. Structure 24.1 (2016): 171-178.
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Daten bereitgestellt von Europe PubMed Central.
Arguments for an additional long-lived intermediate in the photocycle of the full-length aureochrome 1c receptor: A time-resolved small-angle X-ray scattering study.
Bannister S, Böhm E, Zinn T, Hellweg T, Kottke T., Struct Dyn 6(3), 2019
PMID: 31263739
Bannister S, Böhm E, Zinn T, Hellweg T, Kottke T., Struct Dyn 6(3), 2019
PMID: 31263739
Quantitative analyses of the equilibria among DNA complexes of a blue-light-regulated bZIP module, Photozipper.
Nakatani Y, Hisatomi O., Biophys Physicobiol 15(), 2018
PMID: 29450110
Nakatani Y, Hisatomi O., Biophys Physicobiol 15(), 2018
PMID: 29450110
Solving Blue Light Riddles: New Lessons from Flavin-binding LOV Photoreceptors.
Losi A, Gärtner W., Photochem Photobiol 93(1), 2017
PMID: 27861974
Losi A, Gärtner W., Photochem Photobiol 93(1), 2017
PMID: 27861974
Engineering genetically-encoded tools for optogenetic control of protein activity.
Liu Q, Tucker CL., Curr Opin Chem Biol 40(), 2017
PMID: 28527343
Liu Q, Tucker CL., Curr Opin Chem Biol 40(), 2017
PMID: 28527343
PtAUREO1a and PtAUREO1b knockout mutants of the diatom Phaeodactylum tricornutum are blocked in photoacclimation to blue light.
Mann M, Serif M, Jakob T, Kroth PG, Wilhelm C., J Plant Physiol 217(), 2017
PMID: 28610707
Mann M, Serif M, Jakob T, Kroth PG, Wilhelm C., J Plant Physiol 217(), 2017
PMID: 28610707
Light at the End of the Protein: Crystal Structure of a C-Terminal Light-Sensing Domain.
Janovjak H., Structure 24(2), 2016
PMID: 26840826
Janovjak H., Structure 24(2), 2016
PMID: 26840826
Allosteric communication between DNA-binding and light-responsive domains of diatom class I aureochromes.
Banerjee A, Herman E, Serif M, Maestre-Reyna M, Hepp S, Pokorny R, Kroth PG, Essen LO, Kottke T., Nucleic Acids Res 44(12), 2016
PMID: 27179025
Banerjee A, Herman E, Serif M, Maestre-Reyna M, Hepp S, Pokorny R, Kroth PG, Essen LO, Kottke T., Nucleic Acids Res 44(12), 2016
PMID: 27179025
35 References
Daten bereitgestellt von Europe PubMed Central.
Mutations in N-terminal flanking region of blue light-sensing light-oxygen and voltage 2 (LOV2) domain disrupt its repressive activity on kinase domain in the Chlamydomonas phototropin.
Aihara Y, Yamamoto T, Okajima K, Yamamoto K, Suzuki T, Tokutomi S, Tanaka K, Nagatani A., J. Biol. Chem. 287(13), 2012
PMID: 22291022
Aihara Y, Yamamoto T, Okajima K, Yamamoto K, Suzuki T, Tokutomi S, Tanaka K, Nagatani A., J. Biol. Chem. 287(13), 2012
PMID: 22291022
Light-induced subunit dissociation by a light-oxygen-voltage domain photoreceptor from Rhodobacter sphaeroides.
Conrad KS, Bilwes AM, Crane BR., Biochemistry 52(2), 2013
PMID: 23252338
Conrad KS, Bilwes AM, Crane BR., Biochemistry 52(2), 2013
PMID: 23252338
Structure of a flavin-binding plant photoreceptor domain: insights into light-mediated signal transduction.
Crosson S, Moffat K., Proc. Natl. Acad. Sci. U.S.A. 98(6), 2001
PMID: 11248020
Crosson S, Moffat K., Proc. Natl. Acad. Sci. U.S.A. 98(6), 2001
PMID: 11248020
Higher plants use LOV to perceive blue light.
Demarsy E, Fankhauser C., Curr. Opin. Plant Biol. 12(1), 2008
PMID: 18930433
Demarsy E, Fankhauser C., Curr. Opin. Plant Biol. 12(1), 2008
PMID: 18930433
The GCN4 basic region leucine zipper binds DNA as a dimer of uninterrupted alpha helices: crystal structure of the protein-DNA complex.
Ellenberger TE, Brandl CJ, Struhl K, Harrison SC., Cell 71(7), 1992
PMID: 1473154
Ellenberger TE, Brandl CJ, Struhl K, Harrison SC., Cell 71(7), 1992
PMID: 1473154
White Collar-1, a circadian blue light photoreceptor, binding to the frequency promoter.
Froehlich AC, Liu Y, Loros JJ, Dunlap JC., Science 297(5582), 2002
PMID: 12098706
Froehlich AC, Liu Y, Loros JJ, Dunlap JC., Science 297(5582), 2002
PMID: 12098706
SARS CoV main proteinase: The monomer-dimer equilibrium dissociation constant.
Graziano V, McGrath WJ, Yang L, Mangel WF., Biochemistry 45(49), 2006
PMID: 17144656
Graziano V, McGrath WJ, Yang L, Mangel WF., Biochemistry 45(49), 2006
PMID: 17144656
Spatio-temporally precise activation of engineered receptor tyrosine kinases by light.
Grusch M, Schelch K, Riedler R, Reichhart E, Differ C, Berger W, Ingles-Prieto A, Janovjak H., EMBO J. 33(15), 2014
PMID: 24986882
Grusch M, Schelch K, Riedler R, Reichhart E, Differ C, Berger W, Ingles-Prieto A, Janovjak H., EMBO J. 33(15), 2014
PMID: 24986882
SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling.
Guex N, Peitsch MC., Electrophoresis 18(15), 1997
PMID: 9504803
Guex N, Peitsch MC., Electrophoresis 18(15), 1997
PMID: 9504803
N- and C-terminal flanking regions modulate light-induced signal transduction in the LOV2 domain of the blue light sensor phototropin 1 from Avena sativa.
Halavaty AS, Moffat K., Biochemistry 46(49), 2007
PMID: 18001137
Halavaty AS, Moffat K., Biochemistry 46(49), 2007
PMID: 18001137
Coiled-coil dimerization of the LOV2 domain of the blue-light photoreceptor phototropin 1 from Arabidopsis thaliana.
Halavaty AS, Moffat K., Acta Crystallogr. Sect. F Struct. Biol. Cryst. Commun. 69(Pt 12), 2013
PMID: 24316821
Halavaty AS, Moffat K., Acta Crystallogr. Sect. F Struct. Biol. Cryst. Commun. 69(Pt 12), 2013
PMID: 24316821
Structural basis of a phototropin light switch.
Harper SM, Neil LC, Gardner KH., Science 301(5639), 2003
PMID: 12970567
Harper SM, Neil LC, Gardner KH., Science 301(5639), 2003
PMID: 12970567
Disruption of the LOV-Jalpha helix interaction activates phototropin kinase activity.
Harper SM, Christie JM, Gardner KH., Biochemistry 43(51), 2004
PMID: 15610012
Harper SM, Christie JM, Gardner KH., Biochemistry 43(51), 2004
PMID: 15610012
White collar-1, a DNA binding transcription factor and a light sensor.
He Q, Cheng P, Yang Y, Wang L, Gardner KH, Liu Y., Science 297(5582), 2002
PMID: 12098705
He Q, Cheng P, Yang Y, Wang L, Gardner KH, Liu Y., Science 297(5582), 2002
PMID: 12098705
Allosterically regulated unfolding of the A'α helix exposes the dimerization site of the blue-light-sensing aureochrome-LOV domain.
Herman E, Kottke T., Biochemistry 54(7), 2015
PMID: 25621532
Herman E, Kottke T., Biochemistry 54(7), 2015
PMID: 25621532
Blue-light-induced unfolding of the Jα helix allows for the dimerization of aureochrome-LOV from the diatom Phaeodactylum tricornutum.
Herman E, Sachse M, Kroth PG, Kottke T., Biochemistry 52(18), 2013
PMID: 23621750
Herman E, Sachse M, Kroth PG, Kottke T., Biochemistry 52(18), 2013
PMID: 23621750
Function, structure and mechanism of bacterial photosensory LOV proteins.
Herrou J, Crosson S., Nat. Rev. Microbiol. 9(10), 2011
PMID: 21822294
Herrou J, Crosson S., Nat. Rev. Microbiol. 9(10), 2011
PMID: 21822294
Blue light-induced conformational changes in a light-regulated transcription factor, aureochrome-1.
Hisatomi O, Takeuchi K, Zikihara K, Ookubo Y, Nakatani Y, Takahashi F, Tokutomi S, Kataoka H., Plant Cell Physiol. 54(1), 2012
PMID: 23220692
Hisatomi O, Takeuchi K, Zikihara K, Ookubo Y, Nakatani Y, Takahashi F, Tokutomi S, Kataoka H., Plant Cell Physiol. 54(1), 2012
PMID: 23220692
Blue light-induced dimerization of monomeric aureochrome-1 enhances its affinity for the target sequence.
Hisatomi O, Nakatani Y, Takeuchi K, Takahashi F, Kataoka H., J. Biol. Chem. 289(25), 2014
PMID: 24790107
Hisatomi O, Nakatani Y, Takeuchi K, Takahashi F, Kataoka H., J. Biol. Chem. 289(25), 2014
PMID: 24790107
AUREOCHROME1a-mediated induction of the diatom-specific cyclin dsCYC2 controls the onset of cell division in diatoms (Phaeodactylum tricornutum).
Huysman MJ, Fortunato AE, Matthijs M, Costa BS, Vanderhaeghen R, Van den Daele H, Sachse M, Inze D, Bowler C, Kroth PG, Wilhelm C, Falciatore A, Vyverman W, De Veylder L., Plant Cell 25(1), 2013
PMID: 23292736
Huysman MJ, Fortunato AE, Matthijs M, Costa BS, Vanderhaeghen R, Van den Daele H, Sachse M, Inze D, Bowler C, Kroth PG, Wilhelm C, Falciatore A, Vyverman W, De Veylder L., Plant Cell 25(1), 2013
PMID: 23292736
Inference of macromolecular assemblies from crystalline state.
Krissinel E, Henrick K., J. Mol. Biol. 372(3), 2007
PMID: 17681537
Krissinel E, Henrick K., J. Mol. Biol. 372(3), 2007
PMID: 17681537
Old chromophores, new photoactivation paradigms, trendy applications: flavins in blue light-sensing photoreceptors.
Losi A, Gartner W., Photochem. Photobiol. 87(3), 2011
PMID: 21352235
Losi A, Gartner W., Photochem. Photobiol. 87(3), 2011
PMID: 21352235
Crystal structures of Aureochrome1 LOV suggest new design strategies for optogenetics.
Mitra D, Yang X, Moffat K., Structure 20(4), 2012
PMID: 22483116
Mitra D, Yang X, Moffat K., Structure 20(4), 2012
PMID: 22483116
Structural basis for light-dependent signaling in the dimeric LOV domain of the photosensor YtvA.
Moglich A, Moffat K., J. Mol. Biol. 373(1), 2007
PMID: 17764689
Moglich A, Moffat K., J. Mol. Biol. 373(1), 2007
PMID: 17764689
Rod models of DNA: sequence-dependent anisotropic elastic modelling of local bending phenomena.
Munteanu MG, Vlahovicek K, Parthasarathy S, Simon I, Pongor S., Trends Biochem. Sci. 23(9), 1998
PMID: 9787640
Munteanu MG, Vlahovicek K, Parthasarathy S, Simon I, Pongor S., Trends Biochem. Sci. 23(9), 1998
PMID: 9787640
Molecular Mechanism of Photozipper, a Light-Regulated Dimerizing Module Consisting of the bZIP and LOV Domains of Aureochrome-1.
Nakatani Y, Hisatomi O., Biochemistry 54(21), 2015
PMID: 25932652
Nakatani Y, Hisatomi O., Biochemistry 54(21), 2015
PMID: 25932652
Structural basis of the LOV1 dimerization of Arabidopsis phototropins 1 and 2.
Nakasako M, Zikihara K, Matsuoka D, Katsura H, Tokutomi S., J. Mol. Biol. 381(3), 2008
PMID: 18585389
Nakasako M, Zikihara K, Matsuoka D, Katsura H, Tokutomi S., J. Mol. Biol. 381(3), 2008
PMID: 18585389
Role of Gln1029 in the photoactivation processes of the LOV2 domain in adiantum phytochrome3.
Nozaki D, Iwata T, Ishikawa T, Todo T, Tokutomi S, Kandori H., Biochemistry 43(26), 2004
PMID: 15222749
Nozaki D, Iwata T, Ishikawa T, Todo T, Tokutomi S, Kandori H., Biochemistry 43(26), 2004
PMID: 15222749
New developments in the ATSAS program package for small-angle scattering data analysis
Petoukhov MV, Franke D, Shkumatov AV, Tria G, Kikhney AG, Gajda M, Gorba C, Mertens HDT, Konarev PV, Svergun DI., J Appl Crystallogr 45(), 2012
PMID: c7010
Petoukhov MV, Franke D, Shkumatov AV, Tria G, Kikhney AG, Gajda M, Gorba C, Mertens HDT, Konarev PV, Svergun DI., J Appl Crystallogr 45(), 2012
PMID: c7010
Aureochrome 1a is involved in the photoacclimation of the diatom Phaeodactylum tricornutum.
Schellenberger Costa B, Sachse M, Jungandreas A, Bartulos CR, Gruber A, Jakob T, Kroth PG, Wilhelm C., PLoS ONE 8(9), 2013
PMID: 24073211
Schellenberger Costa B, Sachse M, Jungandreas A, Bartulos CR, Gruber A, Jakob T, Kroth PG, Wilhelm C., PLoS ONE 8(9), 2013
PMID: 24073211
AUREOCHROME, a photoreceptor required for photomorphogenesis in stramenopiles.
Takahashi F, Yamagata D, Ishikawa M, Fukamatsu Y, Ogura Y, Kasahara M, Kiyosue T, Kikuyama M, Wada M, Kataoka H., Proc. Natl. Acad. Sci. U.S.A. 104(49), 2007
PMID: 18003911
Takahashi F, Yamagata D, Ishikawa M, Fukamatsu Y, Ogura Y, Kasahara M, Kiyosue T, Kikuyama M, Wada M, Kataoka H., Proc. Natl. Acad. Sci. U.S.A. 104(49), 2007
PMID: 18003911
Structure of a light-activated LOV protein dimer that regulates transcription.
Vaidya AT, Chen CH, Dunlap JC, Loros JJ, Crane BR., Sci Signal 4(184), 2011
PMID: 21868352
Vaidya AT, Chen CH, Dunlap JC, Loros JJ, Crane BR., Sci Signal 4(184), 2011
PMID: 21868352
Characterization of protein-protein interactions by isothermal titration calorimetry.
Velazquez-Campoy A, Leavitt SA, Freire E., Methods Mol. Biol. 261(), 2004
PMID: 15064448
Velazquez-Campoy A, Leavitt SA, Freire E., Methods Mol. Biol. 261(), 2004
PMID: 15064448
Light activation of the LOV protein vivid generates a rapidly exchanging dimer.
Zoltowski BD, Crane BR., Biochemistry 47(27), 2008
PMID: 18553928
Zoltowski BD, Crane BR., Biochemistry 47(27), 2008
PMID: 18553928
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