Isolation and Characterization of Numerous Novel Phages Targeting Diverse Strains of the Ubiquitous and Opportunistic Pathogen Achromobacter xylosoxidans

Wittmann J, Dreiseikelmann B, Rohde C, Rohde M, Sikorski J (2014)
PLoS ONE 9(1): e86935.

Zeitschriftenaufsatz | Veröffentlicht | Englisch
 
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Autor*in
Wittmann, Johannes; Dreiseikelmann, BrigitteUniBi; Rohde, Christine; Rohde, Manfred; Sikorski, Johannes
Abstract / Bemerkung
The clinical relevance of nosocomially acquired infections caused by multi-resistant Achromobacter strains is rapidly increasing. Here, a diverse set of 61 Achromobacter xylosoxidans strains was characterized by MultiLocus Sequence Typing and Phenotype MicroArray technology. The strains were further analyzed in regard to their susceptibility to 35 antibiotics and to 34 different and newly isolated bacteriophages from the environment. A large proportion of strains were resistant against numerous antibiotics such as cephalosporines, aminoglycosides and quinolones, whereas piperacillin-tazobactam, ticarcillin, mezlocillin and imipenem were still inhibitory. We also present the first expanded study on bacteriophages of the genus Achromobacter that has been so far a blank slate with respect to phage research. The phages were isolated mainly from several waste water treatment plants in Germany. Morphological analysis of all of these phages by electron microscopy revealed a broad diversity with different members of the order Caudovirales, including the families Siphoviridae, Myoviridae, and Podoviridae. A broad spectrum of different host ranges could be determined for several phages that lysed up to 24 different and in part highly antibiotic resistant strains. Molecular characterisation by DNA restriction analysis revealed that all phages contain linear double-stranded DNA. Their restriction patterns display distinct differences underlining their broad diversity.
Erscheinungsjahr
2014
Zeitschriftentitel
PLoS ONE
Band
9
Ausgabe
1
Art.-Nr.
e86935
ISSN
1932-6203
eISSN
1932-6203
Page URI
https://pub.uni-bielefeld.de/record/2664342

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Wittmann J, Dreiseikelmann B, Rohde C, Rohde M, Sikorski J. Isolation and Characterization of Numerous Novel Phages Targeting Diverse Strains of the Ubiquitous and Opportunistic Pathogen Achromobacter xylosoxidans. PLoS ONE. 2014;9(1): e86935.
Wittmann, J., Dreiseikelmann, B., Rohde, C., Rohde, M., & Sikorski, J. (2014). Isolation and Characterization of Numerous Novel Phages Targeting Diverse Strains of the Ubiquitous and Opportunistic Pathogen Achromobacter xylosoxidans. PLoS ONE, 9(1), e86935. doi:10.1371/journal.pone.0086935
Wittmann, Johannes, Dreiseikelmann, Brigitte, Rohde, Christine, Rohde, Manfred, and Sikorski, Johannes. 2014. “Isolation and Characterization of Numerous Novel Phages Targeting Diverse Strains of the Ubiquitous and Opportunistic Pathogen Achromobacter xylosoxidans”. PLoS ONE 9 (1): e86935.
Wittmann, J., Dreiseikelmann, B., Rohde, C., Rohde, M., and Sikorski, J. (2014). Isolation and Characterization of Numerous Novel Phages Targeting Diverse Strains of the Ubiquitous and Opportunistic Pathogen Achromobacter xylosoxidans. PLoS ONE 9:e86935.
Wittmann, J., et al., 2014. Isolation and Characterization of Numerous Novel Phages Targeting Diverse Strains of the Ubiquitous and Opportunistic Pathogen Achromobacter xylosoxidans. PLoS ONE, 9(1): e86935.
J. Wittmann, et al., “Isolation and Characterization of Numerous Novel Phages Targeting Diverse Strains of the Ubiquitous and Opportunistic Pathogen Achromobacter xylosoxidans”, PLoS ONE, vol. 9, 2014, : e86935.
Wittmann, J., Dreiseikelmann, B., Rohde, C., Rohde, M., Sikorski, J.: Isolation and Characterization of Numerous Novel Phages Targeting Diverse Strains of the Ubiquitous and Opportunistic Pathogen Achromobacter xylosoxidans. PLoS ONE. 9, : e86935 (2014).
Wittmann, Johannes, Dreiseikelmann, Brigitte, Rohde, Christine, Rohde, Manfred, and Sikorski, Johannes. “Isolation and Characterization of Numerous Novel Phages Targeting Diverse Strains of the Ubiquitous and Opportunistic Pathogen Achromobacter xylosoxidans”. PLoS ONE 9.1 (2014): e86935.

11 Zitationen in Europe PMC

Daten bereitgestellt von Europe PubMed Central.

Comparative genomic analysis of eight novel haloalkaliphilic bacteriophages from Lake Elmenteita, Kenya.
Akhwale JK, Rohde M, Rohde C, Bunk B, Spröer C, Klenk HP, Boga HI, Wittmann J., PLoS One 14(2), 2019
PMID: 30763364
Characterization of a bacteriophage with broad host range against strains of Pseudomonas aeruginosa isolated from domestic animals.
de Melo ACC, da Mata Gomes A, Melo FL, Ardisson-Araújo DMP, de Vargas APC, Ely VL, Kitajima EW, Ribeiro BM, Wolff JLC., BMC Microbiol 19(1), 2019
PMID: 31208333
Achromobacter Infection Is Rare in Japanese Patients with Pulmonary B-cell Lymphoma.
Aoyama S, Masaki A, Sakamoto Y, Takino H, Murase T, Ohshima K, Yoshino T, Kato S, Inagaki H., Intern Med 57(6), 2018
PMID: 29151525
Characterization and genome comparisons of three Achromobacter phages of the family Siphoviridae.
Dreiseikelmann B, Bunk B, Spröer C, Rohde M, Nimtz M, Wittmann J., Arch Virol 162(8), 2017
PMID: 28357512
Characterization of a novel Achromobacter xylosoxidans specific siphoviruse: phiAxp-1.
Li E, Zhao J, Ma Y, Wei X, Li H, Lin W, Wang X, Li C, Shen Z, Zhao R, Jiang A, Yang H, Yuan J, Zhao X., Sci Rep 6(), 2016
PMID: 26908262
Infection in cystic fibrosis: impact of the environment and climate.
Ramsay KA, Stockwell RE, Bell SC, Kidd TJ., Expert Rev Respir Med 10(5), 2016
PMID: 26949990
Fuerstia marisgermanicae gen. nov., sp. nov., an Unusual Member of the Phylum Planctomycetes from the German Wadden Sea.
Kohn T, Heuer A, Jogler M, Vollmers J, Boedeker C, Bunk B, Rast P, Borchert D, Glöckner I, Freese HM, Klenk HP, Overmann J, Kaster AK, Rohde M, Wiegand S, Jogler C., Front Microbiol 7(), 2016
PMID: 28066393
Planctomycetes do possess a peptidoglycan cell wall.
Jeske O, Schüler M, Schumann P, Schneider A, Boedeker C, Jogler M, Bollschweiler D, Rohde M, Mayer C, Engelhardt H, Spring S, Jogler C., Nat Commun 6(), 2015
PMID: 25964217
Investigation of a Large Collection of Pseudomonas aeruginosa Bacteriophages Collected from a Single Environmental Source in Abidjan, Côte d'Ivoire.
Essoh C, Latino L, Midoux C, Blouin Y, Loukou G, Nguetta SP, Lathro S, Cablanmian A, Kouassi AK, Vergnaud G, Pourcel C., PLoS One 10(6), 2015
PMID: 26115051
First genome sequences of Achromobacter phages reveal new members of the N4 family.
Wittmann J, Dreiseikelmann B, Rohde M, Meier-Kolthoff JP, Bunk B, Rohde C., Virol J 11(), 2014
PMID: 24468270

77 References

Daten bereitgestellt von Europe PubMed Central.

Achromobacter xylosoxidans n. sp. from human ear discharge.
Yabuuchi E, Oyama A., Jpn. J. Microbiol. 15(5), 1971
PMID: 5316576

AUTHOR UNKNOWN, 0
Nosocomial colonization and infection by Achromobacter xylosoxidans.
Reverdy ME, Freney J, Fleurette J, Coulet M, Surgot M, Marmet D, Ploton C., J. Clin. Microbiol. 19(2), 1984
PMID: 6699141
Selection and application of endophytic bacterium Achromobacter xylosoxidans strain F3B for improving phytoremediation of phenolic pollutants
AUTHOR UNKNOWN, 2012
Chlorocatechol catabolic enzymes from Achromobacter xylosoxidans A8
AUTHOR UNKNOWN, 2004
Nucleotide sequence, organization and characterization of the (halo)aromatic acid catabolic plasmid pA81 from Achromobacter xylosoxidans A8.
Jencova V, Strnad H, Chodora Z, Ulbrich P, Vlcek C, Hickey WJ, Paces V., Res. Microbiol. 159(2), 2007
PMID: 18249097
Complete genome sequence of the haloaromatic acid-degrading bacterium Achromobacter xylosoxidans A8.
Strnad H, Ridl J, Paces J, Kolar M, Vlcek C, Paces V., J. Bacteriol. 193(3), 2010
PMID: 21097610
Achromobacter xylosoxidans respiratory tract infection in cystic fibrosis patients.
Lambiase A, Catania MR, Del Pezzo M, Rossano F, Terlizzi V, Sepe A, Raia V., Eur. J. Clin. Microbiol. Infect. Dis. 30(8), 2011
PMID: 21279730
Respiratory microbiology of patients with cystic fibrosis in the United States, 1995 to 2005.
Razvi S, Quittell L, Sewall A, Quinton H, Marshall B, Saiman L., Chest 136(6), 2009
PMID: 19505987
Achromobacter xylosoxidans subsp. xylosoxidans prosthetic aortic valve infective endocarditis and aortic root abscesses.
van Hal S, Stark D, Marriott D, Harkness J., J. Med. Microbiol. 57(Pt 4), 2008
PMID: 18349376
Investigation and control of an outbreak of Achromobacter xylosoxidans bacteremia.
Behrens-Muller B, Conway J, Yoder J, Conover CS., Infect Control Hosp Epidemiol 33(2), 2012
PMID: 22227988
Outbreak of long-term intravascular catheter-related bacteremia due to Achromobacter xylosoxidans subspecies xylosoxidans in a hemodialysis unit.
Tena D, Carranza R, Barbera JR, Valdezate S, Garrancho JM, Arranz M, Saez-Nieto JA., Eur. J. Clin. Microbiol. Infect. Dis. 24(11), 2005
PMID: 16283217
A case of meningitis due to Achromobacter xylosoxidans denitrificans 60 years after a cranial trauma.
Manckoundia P, Mazen E, Coste AS, Somana S, Marilier S, Duez JM, Camus A, Popitean L, Bador J, Pfitzenmeyer P., Med. Sci. Monit. 17(6), 2011
PMID: 21629191
Achromobacter xylosoxidans keratitis after contact lens usage.
Park JH, Song NH, Koh JW., Korean J Ophthalmol 26(1), 2012
PMID: 22323886
Urinary tract infection due to Achromobacter xylosoxidans: report of 9 cases.
Tena D, Gonzalez-Praetorius A, Perez-Balsalobre M, Sancho O, Bisquert J., Scand. J. Infect. Dis. 40(2), 2008
PMID: 17852927
Emerging and unusual gram-negative infections in cystic fibrosis.
Davies JC, Rubin BK., Semin Respir Crit Care Med 28(3), 2007
PMID: 17562501
Marked increase in incidence of Achromobacter xylosoxidans infections caused by sporadic acquisition from the environment.
Ridderberg W, Bendstrup KE, Olesen HV, Jensen-Fangel S, Norskov-Lauritsen N., J. Cyst. Fibros. 10(6), 2011
PMID: 21835703
Investigation of an outbreak of wound infections due to Alcaligenes xylosoxidans transmitted by chlorhexidine in a burns unit.
Vu-Thien H, Darbord JC, Moissenet D, Dulot C, Dufourcq JB, Marsol P, Garbarg-Chenon A., Eur. J. Clin. Microbiol. Infect. Dis. 17(10), 1998
PMID: 9865987
Patient risk of contact with respiratory pathogens from inanimate surfaces in a cystic fibrosis outpatient clinic. A prospective study over a four-year period.
Festini F, Taccetti G, Mannini C, Campana S, Mergni G, Vignoli N, Allegretti N, Ravenni N, Cocchi P, Neri S, Repetto T, de Martino M., Pediatr. Pulmonol. 42(9), 2007
PMID: 17639586
Nosocomial outbreak of Achromobacter xylosoxidans associated with a diagnostic contrast solution.
Reina J, Antich M, Siquier B, Alomar P., J. Clin. Pathol. 41(8), 1988
PMID: 3170779
An outbreak of achromobacter xylosoxidans associated with ultrasound gel used during transrectal ultrasound guided prostate biopsy.
Olshtain-Pops K, Block C, Temper V, Hidalgo-Grass C, Gross I, Moses AE, Gofrit ON, Benenson S., J. Urol. 185(1), 2010
PMID: 21074197
Achromobacter xylosoxidans bacteremia: report of four cases and review of the literature.
Duggan JM, Goldstein SJ, Chenoweth CE, Kauffman CA, Bradley SF., Clin. Infect. Dis. 23(3), 1996
PMID: 8879782
Catheter-related right-sided endocarditis in bone marrow transplant recipients.
Martino P, Micozzi A, Venditti M, Gentile G, Girmenia C, Raccah R, Santilli S, Alessandri N, Mandelli F., Rev. Infect. Dis. 12(2), 1990
PMID: 2330480
Postoperative infection of an aortic prosthesis with Achromobacter xylosoxidans.
Olson DA, Hoeprich PD., West. J. Med. 136(2), 1982
PMID: 7064475
Molecular characterization of IMP-type metallo-β-lactamases among multidrug-resistant Achromobacter xylosoxidans.
Yamamoto M, Nagao M, Hotta G, Matsumura Y, Matsushima A, Ito Y, Takakura S, Ichiyama S., J. Antimicrob. Chemother. 67(9), 2012
PMID: 22577105
Fix the antibiotics pipeline.
Cooper MA, Shlaes D., Nature 472(7341), 2011
PMID: 21475175
Decrease in antibiotic susceptibility or increase in resistance?
Walker RD, Thornsberry C., J. Antimicrob. Chemother. 41(1), 1998
PMID: 9511029
Comparative study of the beta-lactamase activity found in Achromobacter.
Levesque R, Letarte R, Pechere JC., Can. J. Microbiol. 29(7), 1983
PMID: 6193853
Innate aminoglycoside resistance of Achromobacter xylosoxidans is due to AxyXY-OprZ, an RND-type multidrug efflux pump.
Bador J, Amoureux L, Blanc E, Neuwirth C., Antimicrob. Agents Chemother. 57(1), 2012
PMID: 23089757
Potential of bacteriophages and their lysins in the treatment of MRSA: current status and future perspectives.
Borysowski J, Lobocka M, Miedzybrodzki R, Weber-Dabrowska B, Gorski A., BioDrugs 25(6), 2011
PMID: 22050337
Phage cocktails and the future of phage therapy.
Chan BK, Abedon ST, Loc-Carrillo C., Future Microbiol 8(6), 2013
PMID: 23701332
Introducing yesterday’s phage therapy in today’s medicine
AUTHOR UNKNOWN, 2012
Bacteriophages and cryptic lysogeny in Achromobacter.
Thomson JA, Woods DR., J. Gen. Virol. 22(1), 1974
PMID: 4813420

AUTHOR UNKNOWN, 0
Experimental phage therapy against Staphylococcus aureus in mice.
Capparelli R, Parlato M, Borriello G, Salvatore P, Iannelli D., Antimicrob. Agents Chemother. 51(8), 2007
PMID: 17517843
Virulent bacteriophage for efficient biocontrol of Listeria monocytogenes in ready-to-eat foods.
Guenther S, Huwyler D, Richard S, Loessner MJ., Appl. Environ. Microbiol. 75(1), 2008
PMID: 19011076
Bacteriophage and their lysins for elimination of infectious bacteria.
O'Flaherty S, Ross RP, Coffey A., FEMS Microbiol. Rev. 33(4), 2009
PMID: 19416364
Selection and characterization of a candidate therapeutic bacteriophage that lyses the Escherichia coli O104:H4 strain from the 2011 outbreak in Germany.
Merabishvili M, De Vos D, Verbeken G, Kropinski AM, Vandenheuvel D, Lavigne R, Wattiau P, Mast J, Ragimbeau C, Mossong J, Scheres J, Chanishvili N, Vaneechoutte M, Pirnay JP., PLoS ONE 7(12), 2012
PMID: 23285164
Achromobacter xylosoxidans: an emerging pathogen carrying different elements involved in horizontal genetic transfer.
Traglia GM, Almuzara M, Merkier AK, Adams C, Galanternik L, Vay C, Centron D, Ramirez MS., Curr. Microbiol. 65(6), 2012
PMID: 22926720
Bacteriophage-mediated transduction of antibiotic resistance in enterococci.
Mazaheri Nezhad Fard R, Barton MD, Heuzenroeder MW., Lett. Appl. Microbiol. 52(6), 2011
PMID: 21395627
Unstable generalized transduction in Achromobacter.
Woods DR, Thomson JA., J. Gen. Microbiol. 88(1), 1975
PMID: 1151337
Isolation and characterisation of lytic bacteriophages of Klebsiella pneumoniae and Klebsiella oxytoca.
Karumidze N, Kusradze Ia, Rigvava S, Goderdzishvili M, Rajakumar K, Alavidze Z., Curr. Microbiol. 66(3), 2012
PMID: 23143289
Transcriptional map of bacteriophage N4. Location and polarity of N4 RNAs.
Zivin R, Zehring W, Rothman-Denes LB., J. Mol. Biol. 152(2), 1981
PMID: 6276570
Whole genome sequencing and comparative genomic analyses of two Vibrio cholerae O139 Bengal-specific Podoviruses to other N4-like phages reveal extensive genetic diversity.
Fouts DE, Klumpp J, Bishop-Lilly KA, Rajavel M, Willner KM, Butani A, Henry M, Biswas B, Li M, Albert MJ, Loessner MJ, Calendar R, Sozhamannan S., Virol. J. 10(), 2013
PMID: 23714204
Bacteriophage genomics.
Hatfull GF., Curr. Opin. Microbiol. 11(5), 2008
PMID: 18824125
Characterization of JG024, a pseudomonas aeruginosa PB1-like broad host range phage under simulated infection conditions.
Garbe J, Wesche A, Bunk B, Kazmierczak M, Selezska K, Rohde C, Sikorski J, Rohde M, Jahn D, Schobert M., BMC Microbiol. 10(), 2010
PMID: 21110836
Bacteriophages φMR299-2 and φNH-4 can eliminate Pseudomonas aeruginosa in the murine lung and on cystic fibrosis lung airway cells.
Alemayehu D, Casey PG, McAuliffe O, Guinane CM, Martin JG, Shanahan F, Coffey A, Ross RP, Hill C., MBio 3(2), 2012
PMID: 22396480

AUTHOR UNKNOWN, 0
MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.
Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S., Mol. Biol. Evol. 28(10), 2011
PMID: 21546353
DnaSP v5: a software for comprehensive analysis of DNA polymorphism data.
Librado P, Rozas J., Bioinformatics 25(11), 2009
PMID: 19346325
LIAN 3.0: detecting linkage disequilibrium in multilocus data. Linkage Analysis.
Haubold B, Hudson RR., Bioinformatics 16(9), 2000
PMID: 11108709
opm: an R package for analysing OmniLog(R) phenotype microarray data.
Vaas LA, Sikorski J, Hofner B, Fiebig A, Buddruhs N, Klenk HP, Goker M., Bioinformatics 29(14), 2013
PMID: 23740744

AUTHOR UNKNOWN, 0

AUTHOR UNKNOWN, 0
Simultaneous inference in general parametric models.
Hothorn T, Bretz F, Westfall P., Biom J 50(3), 2008
PMID: 18481363
Biocontrol of Staphylococcus aureus in curd manufacturing processes using bacteriophages
Garcia P, Madera C, Martinez B, Rodriguez A., Int. Dairy J. 17(10), 2007
PMID: IND43959645
Bacteriophages of freshwater Brevundimonas vesicularis isolates.
Beilstein F, Dreiseikelmann B., Res. Microbiol. 157(3), 2005
PMID: 16183261
Regulation of glutamine synthetase. XII. Electron microscopy of the enzyme from Escherichia coli.
Valentine RC, Shapiro BM, Stadtman ER., Biochemistry 7(6), 1968
PMID: 4873173
Bacteriophage-resistant Staphylococcus aureus mutant confers broad immunity against staphylococcal infection in mice.
Capparelli R, Nocerino N, Lanzetta R, Silipo A, Amoresano A, Giangrande C, Becker K, Blaiotta G, Evidente A, Cimmino A, Iannaccone M, Parlato M, Medaglia C, Roperto S, Roperto F, Ramunno L, Iannelli D., PLoS ONE 5(7), 2010
PMID: 20661301
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