Unidirectional Molecular Stacking of Tribenzotriquinacenes in the Solid State: A Combined X-ray and Theoretical Study

Brandenburg JG, Grimme S, Jones PG, Markopoulos G, Hopf H, Cyranski MK, Kuck D (2013)
Chemistry 19(30): 9930-9938.

Zeitschriftenaufsatz | Veröffentlicht | Englisch
 
Download
Es wurden keine Dateien hochgeladen. Nur Publikationsnachweis!
Autor*in
Brandenburg, Jan Gerit; Grimme, Stefan; Jones, Peter G.; Markopoulos, Georgios; Hopf, Henning; Cyranski, Michal K.; Kuck, DietmarUniBi
Abstract / Bemerkung
A combined X-ray diffraction and theoretical study of the solid-state molecular and crystal structures of tribenzotriquinacene (TBTQ, 2) and its centro-methyl derivative (3) is presented. The molecular structure of the parent hydrocarbon displays C-3v symmetry and the three indane wings adopt mutually orthogonal orientations, similar to the case in its previously reported methyl derivative (3). Also similarly to the latter structure, the bowl-shaped molecules of compound 2 form infinite molecular stacks with perfectly axial, face-to-back (convex-concave) packing and with parallel and unidirectional orientation of the stacks. The experimentally determined intra-stack molecular distance is 4.75 angstrom for compound 2 and 5.95 angstrom for compound 3. Whereas the molecules of compound 2 show a slight alternating rotation (+/- 6 degrees) about the common axis of each stack, those of compound 3 show perfect translational symmetry within the stacks. We used dispersion-corrected density functional theory to compute the crystal structures of tribenzotriquinacenes 2 and 3. The London dispersion correction was crucial for obtaining an accurate description of the crystallization of both analyzed systems and the calculated results agreed excellently with the experimental measurements. We also obtained reasonable sublimation energies for both compounds. In addition, the geometries and dimerization energies of oligomeric stacks of compound 2 were computed and showed smooth convergence to the properties of the infinite polymeric stack.
Stichworte
tribenzotriquinacenes; stacking interactions; bowl-shaped molecules; density functional theory; X-ray diffraction
Erscheinungsjahr
2013
Zeitschriftentitel
Chemistry
Band
19
Ausgabe
30
Seite(n)
9930-9938
ISSN
0947-6539
Page URI
https://pub.uni-bielefeld.de/record/2622249

Zitieren

Brandenburg JG, Grimme S, Jones PG, et al. Unidirectional Molecular Stacking of Tribenzotriquinacenes in the Solid State: A Combined X-ray and Theoretical Study. Chemistry. 2013;19(30):9930-9938.
Brandenburg, J. G., Grimme, S., Jones, P. G., Markopoulos, G., Hopf, H., Cyranski, M. K., & Kuck, D. (2013). Unidirectional Molecular Stacking of Tribenzotriquinacenes in the Solid State: A Combined X-ray and Theoretical Study. Chemistry, 19(30), 9930-9938. doi:10.1002/chem.201300761
Brandenburg, Jan Gerit, Grimme, Stefan, Jones, Peter G., Markopoulos, Georgios, Hopf, Henning, Cyranski, Michal K., and Kuck, Dietmar. 2013. “Unidirectional Molecular Stacking of Tribenzotriquinacenes in the Solid State: A Combined X-ray and Theoretical Study”. Chemistry 19 (30): 9930-9938.
Brandenburg, J. G., Grimme, S., Jones, P. G., Markopoulos, G., Hopf, H., Cyranski, M. K., and Kuck, D. (2013). Unidirectional Molecular Stacking of Tribenzotriquinacenes in the Solid State: A Combined X-ray and Theoretical Study. Chemistry 19, 9930-9938.
Brandenburg, J.G., et al., 2013. Unidirectional Molecular Stacking of Tribenzotriquinacenes in the Solid State: A Combined X-ray and Theoretical Study. Chemistry, 19(30), p 9930-9938.
J.G. Brandenburg, et al., “Unidirectional Molecular Stacking of Tribenzotriquinacenes in the Solid State: A Combined X-ray and Theoretical Study”, Chemistry, vol. 19, 2013, pp. 9930-9938.
Brandenburg, J.G., Grimme, S., Jones, P.G., Markopoulos, G., Hopf, H., Cyranski, M.K., Kuck, D.: Unidirectional Molecular Stacking of Tribenzotriquinacenes in the Solid State: A Combined X-ray and Theoretical Study. Chemistry. 19, 9930-9938 (2013).
Brandenburg, Jan Gerit, Grimme, Stefan, Jones, Peter G., Markopoulos, Georgios, Hopf, Henning, Cyranski, Michal K., and Kuck, Dietmar. “Unidirectional Molecular Stacking of Tribenzotriquinacenes in the Solid State: A Combined X-ray and Theoretical Study”. Chemistry 19.30 (2013): 9930-9938.

11 Zitationen in Europe PMC

Daten bereitgestellt von Europe PubMed Central.

Simplified DFT methods for consistent structures and energies of large systems.
Caldeweyher E, Brandenburg JG., J Phys Condens Matter 30(21), 2018
PMID: 29633964
Stereoselective synthesis of enantiomerically pure bowl-shaped hydroxytribenzotriquinacenes.
Rommelmann P, Nachtigall B, Guntelmann T, Gröger H, Kuck D., Org Biomol Chem 16(31), 2018
PMID: 30033471
Centrohexaindane: six benzene rings mutually fixed in three dimensions - solid-state structure and six-fold nitration.
Kuck D, Linke J, Teichmann LC, Barth D, Tellenbröker J, Gestmann D, Neumann B, Stammler HG, Bögge H., Phys Chem Chem Phys 18(17), 2016
PMID: 26728545
Pentaindenocorannulene: Properties, Assemblies, and C60 Complex.
Lampart S, Roch LM, Dutta AK, Wang Y, Warshamanage R, Finke AD, Linden A, Baldridge KK, Siegel JS., Angew Chem Int Ed Engl 55(47), 2016
PMID: 27709796
Non-centrosymmetric homochiral supramolecular polymers of tetrahedral subphthalocyanine molecules.
Guilleme J, Mayoral MJ, Calbo J, Aragó J, Viruela PM, Ortí E, Torres T, González-Rodríguez D., Angew Chem Int Ed Engl 54(8), 2015
PMID: 25597927
Consistent structures and interactions by density functional theory with small atomic orbital basis sets.
Grimme S, Brandenburg JG, Bannwarth C, Hansen A., J Chem Phys 143(5), 2015
PMID: 26254642
Enantiomerically Pure Tribenzotriquinacenes through Stereoselective Synthesis.
Greschner W, Neumann B, Stammler HG, Gröger H, Kuck D., Angew Chem Int Ed Engl 54(46), 2015
PMID: 26404021

81 References

Daten bereitgestellt von Europe PubMed Central.


Woodward, J. Am. Chem. Soc. 86(), 1964

Hopf, 2000

AUTHOR UNKNOWN, 0

Bertz, Can. J. Chem. 71(), 1993

Carceller, Tetrahedron 42(), 1986

Verevkin, J. Am. Chem. Soc. 120(), 1998

AUTHOR UNKNOWN, 0

Haag, Angew. Chem. 108(), 1996

AUTHOR UNKNOWN, Angew. Chem. Int. Ed. Engl. 35(), 1996

Haag, J. Am. Chem. Soc. 117(), 1995

Stevens, J. Org. Chem. 41(), 1976

AUTHOR UNKNOWN, 0

Kuck, Angew. Chem. 96(), 1984

AUTHOR UNKNOWN, Angew. Chem. Int. Ed. Engl. 23(), 1984

Kuck, Chem. Ber. 125(), 1992

AUTHOR UNKNOWN, 0

Kuck, Angew. Chem. 101(), 1989

AUTHOR UNKNOWN, Angew. Chem. Int. Ed. Engl. 28(), 1989

Kuck, Chem. Ber. 127(), 1994

AUTHOR UNKNOWN, 0

Markopoulos, Angew. Chem. 124(), 2012
Tribenzotriquinacene: a versatile synthesis and C3-chiral platforms.
Markopoulos G, Henneicke L, Shen J, Okamoto Y, Jones PG, Hopf H., Angew. Chem. Int. Ed. Engl. 51(51), 2012
PMID: 23144000

Saravanakumar, Synlett 24(), 2013

Kuck, Tetrahedron 57(), 2001

AUTHOR UNKNOWN, 0

AUTHOR UNKNOWN, 0

Kuck, Pure Appl. Chem. 78(), 2006

Zhang, Chin. J. Org. Chem. 27(), 2007

Tellenbröker, Angew. Chem. 111(), 1999

AUTHOR UNKNOWN, Angew. Chem. Int. Ed. 38(), 1999

AUTHOR UNKNOWN, 0
C3v-symmetrical tribenzotriquinacenes as hosts for C60 and C70 in solution and in the solid state.
Georghiou PE, Dawe LN, Tran HA, Strube J, Neumann B, Stammler HG, Kuck D., J. Org. Chem. 73(22), 2008
PMID: 18850747
Tribenzotriquinacenes bearing six-fold benzofuran extensions: electron-rich C3v-symmetrical hosts for C60.
Wang T, Li ZY, Xie AL, Yao XJ, Cao XP, Kuck D., J. Org. Chem. 76(9), 2011
PMID: 21428457
Three orthogonal chromophores operating independently within the same molecule.
Langhals H, Rauscher M, Strube J, Kuck D., J. Org. Chem. 73(3), 2008
PMID: 18184004

AUTHOR UNKNOWN, 0
Synthesis and optical resolution of inherently chiral difunctionalized tribenzotriquinacenes.
Niu WX, Wang T, Hou QQ, Li ZY, Cao XP, Kuck D., J. Org. Chem. 75(19), 2010
PMID: 20804178

AUTHOR UNKNOWN, 0
Structural elucidation of sumanene and generation of its benzylic anions.
Sakurai H, Daiko T, Sakane H, Amaya T, Hirao T., J. Am. Chem. Soc. 127(33), 2005
PMID: 16104716

Hirao, 2012

Forkey, J. Am. Chem. Soc. 119(), 1997

Petrukhina, Angew. Chem. 116(), 2004

Sygula, J. Chem. Soc. Chem. Commun. (), 1994
Effect of the damping function in dispersion corrected density functional theory.
Grimme S, Ehrlich S, Goerigk L., J Comput Chem 32(7), 2011
PMID: 21370243

Schomaker, Acta Crystallogr. B 24(), 1968

AUTHOR UNKNOWN, 0
Ab initio molecular dynamics for liquid metals.
Kresse G, Hafner J., Phys. Rev., B Condens. Matter 47(1), 1993
PMID: 10004490

AUTHOR UNKNOWN, 0

Kresse, Comput. Mater. Sci. 6(), 1996
Efficient iterative schemes for ab initio total-energy calculations using a plane-wave basis set.
Kresse G, Furthmuller J., Phys. Rev., B Condens. Matter 54(16), 1996
PMID: 9984901
Generalized Gradient Approximation Made Simple.
Perdew JP, Burke K, Ernzerhof M., Phys. Rev. Lett. 77(18), 1996
PMID: 10062328

Perdew, Phys. Rev. Lett. 78(), 1997
Projector augmented-wave method.
Blochl PE., Phys. Rev., B Condens. Matter 50(24), 1994
PMID: 9976227

Kresse, Phys. Rev. B 59(), 1999
Using quaternions to calculate RMSD.
Coutsias EA, Seok C, Dill KA., J Comput Chem 25(15), 2004
PMID: 15376254
A benchmark for non-covalent interactions in solids.
Otero-de-la-Roza A, Johnson ER., J Chem Phys 137(5), 2012
PMID: 22894328

Stephenson, 1987

AUTHOR UNKNOWN, 0

AUTHOR UNKNOWN, 0

Ahlrichs, Chem. Phys. Lett. 162(), 1989

Eichkorn, Chem. Phys. Lett. 240(), 1995

Treutler, J. Chem. Phys. 102(), 1995

Weigend, J. Chem. Phys. 119(), 2003

von, J. Chem. Phys. 111(), 1999

AUTHOR UNKNOWN, 0

Krebs, J. Am. Chem. Soc. 119(), 1997

Curtin, Chem. Rev. 81(), 1981
Anisotropic electron transport properties in sumanene crystal.
Amaya T, Seki S, Moriuchi T, Nakamoto K, Nakata T, Sakane H, Saeki A, Tagawa S, Hirao T., J. Am. Chem. Soc. 131(2), 2009
PMID: 19105693
A short history of SHELX.
Sheldrick GM., Acta Crystallogr., A, Found. Crystallogr. 64(Pt 1), 2007
PMID: 18156677
Export

Markieren/ Markierung löschen
Markierte Publikationen

Open Data PUB

Web of Science

Dieser Datensatz im Web of Science®
Quellen

PMID: 23766137
PubMed | Europe PMC

Suchen in

Google Scholar