Genome sequence of Corynebacterium pseudotuberculosis biovar equi strain 258 and prediction of antigenic targets to improve biotechnological vaccine production
Soares SC, Trost E, Ramos RTJ, Carneiro AR, Santos AR, Pinto AC, Barbosa E, Aburjaile F, Ali A, Diniz CAA, Hassan SS, et al. (2013)
Journal of Biotechnology 167(2): 135-141.
Zeitschriftenaufsatz
| Veröffentlicht | Englisch
Download
Es wurden keine Dateien hochgeladen. Nur Publikationsnachweis!
Autor*in
Soares, Siomar C.;
Trost, EvaUniBi 
;
Ramos, Rommel T. J.;
Carneiro, Adriana R.;
Santos, Anderson R.;
Pinto, Anne C.;
Barbosa, Eudes;
Aburjaile, Flávia;
Ali, Amjad;
Diniz, Carlos A. A.;
Hassan, Syed S.;
Fiaux, Karina
Alle
;
Ramos, Rommel T. J.;
Carneiro, Adriana R.;
Santos, Anderson R.;
Pinto, Anne C.;
Barbosa, Eudes;
Aburjaile, Flávia;
Ali, Amjad;
Diniz, Carlos A. A.;
Hassan, Syed S.;
Fiaux, Karina
Alle
Einrichtung
Abstract / Bemerkung
Corynebacterium pseudotuberculosis is the causative agent of several veterinary diseases in a broad range of economically important hosts, which can vary from caseous lymphadenitis in sheep and goats (biovar ovis) to ulcerative lymphangitis in cattle and horses (biovar equi). Existing vaccines against C. pseudotuberculosis are mainly intended for small ruminants and, even in these hosts, they still present remarkable limitations. In this study, we present the complete genome sequence of C. pseudotuberculosis biovar equi strain 258, isolated from a horse with ulcerative lymphangitis. The genome has a total size of 2,314,404bp and contains 2088 predicted protein-coding regions. Using in silico analysis, eleven pathogenicity islands were detected in the genome sequence of C. pseudotuberculosis 258. The application of a reverse vaccinology strategy identified 49 putative antigenic proteins, which can be used as candidate vaccine targets in future works.
Erscheinungsjahr
2013
Zeitschriftentitel
Journal of Biotechnology
Band
167
Ausgabe
2
Seite(n)
135-141
ISSN
0168-1656
Page URI
https://pub.uni-bielefeld.de/record/2614869
Zitieren
Soares SC, Trost E, Ramos RTJ, et al. Genome sequence of Corynebacterium pseudotuberculosis biovar equi strain 258 and prediction of antigenic targets to improve biotechnological vaccine production. Journal of Biotechnology. 2013;167(2):135-141.
Soares, S. C., Trost, E., Ramos, R. T. J., Carneiro, A. R., Santos, A. R., Pinto, A. C., Barbosa, E., et al. (2013). Genome sequence of Corynebacterium pseudotuberculosis biovar equi strain 258 and prediction of antigenic targets to improve biotechnological vaccine production. Journal of Biotechnology, 167(2), 135-141. doi:10.1016/j.jbiotec.2012.11.003
Soares, Siomar C., Trost, Eva, Ramos, Rommel T. J., Carneiro, Adriana R., Santos, Anderson R., Pinto, Anne C., Barbosa, Eudes, et al. 2013. “Genome sequence of Corynebacterium pseudotuberculosis biovar equi strain 258 and prediction of antigenic targets to improve biotechnological vaccine production”. Journal of Biotechnology 167 (2): 135-141.
Soares, S. C., Trost, E., Ramos, R. T. J., Carneiro, A. R., Santos, A. R., Pinto, A. C., Barbosa, E., Aburjaile, F., Ali, A., Diniz, C. A. A., et al. (2013). Genome sequence of Corynebacterium pseudotuberculosis biovar equi strain 258 and prediction of antigenic targets to improve biotechnological vaccine production. Journal of Biotechnology 167, 135-141.
Soares, S.C., et al., 2013. Genome sequence of Corynebacterium pseudotuberculosis biovar equi strain 258 and prediction of antigenic targets to improve biotechnological vaccine production. Journal of Biotechnology, 167(2), p 135-141.
S.C. Soares, et al., “Genome sequence of Corynebacterium pseudotuberculosis biovar equi strain 258 and prediction of antigenic targets to improve biotechnological vaccine production”, Journal of Biotechnology, vol. 167, 2013, pp. 135-141.
Soares, S.C., Trost, E., Ramos, R.T.J., Carneiro, A.R., Santos, A.R., Pinto, A.C., Barbosa, E., Aburjaile, F., Ali, A., Diniz, C.A.A., Hassan, S.S., Fiaux, K., Guimarães, L.C., Bakhtiar, S.M., Pereira, U., Almeida, S.S., Abreu, V.A.C., Rocha, F.S., Dorella, F.A., Miyoshi, A., Silva, A., Azevedo, V., Tauch, A.: Genome sequence of Corynebacterium pseudotuberculosis biovar equi strain 258 and prediction of antigenic targets to improve biotechnological vaccine production. Journal of Biotechnology. 167, 135-141 (2013).
Soares, Siomar C., Trost, Eva, Ramos, Rommel T. J., Carneiro, Adriana R., Santos, Anderson R., Pinto, Anne C., Barbosa, Eudes, Aburjaile, Flávia, Ali, Amjad, Diniz, Carlos A. A., Hassan, Syed S., Fiaux, Karina, Guimarães, Luis C., Bakhtiar, Syeda M., Pereira, Ulisses, Almeida, Sintia S., Abreu, Vinícius A. C., Rocha, Flávia S., Dorella, Fernanda A., Miyoshi, Anderson, Silva, Artur, Azevedo, Vasco, and Tauch, Andreas. “Genome sequence of Corynebacterium pseudotuberculosis biovar equi strain 258 and prediction of antigenic targets to improve biotechnological vaccine production”. Journal of Biotechnology 167.2 (2013): 135-141.
Daten bereitgestellt von European Bioinformatics Institute (EBI)
EMBL
1 Eintrag gefunden, die diesen Artikel zitieren
Corynebacterium pseudotuberculosis 258, complete genome. (EMBL: CP003540)
Sequence length: 2369817
Download in FASTA format
Sequence length: 2369817
Download in FASTA format
19 Zitationen in Europe PMC
Daten bereitgestellt von Europe PubMed Central.
Vaccines Meet Big Data: State-of-the-Art and Future Prospects. From the Classical 3Is ("Isolate-Inactivate-Inject") Vaccinology 1.0 to Vaccinology 3.0, Vaccinomics, and Beyond: A Historical Overview.
Bragazzi NL, Gianfredi V, Villarini M, Rosselli R, Nasr A, Hussein A, Martini M, Behzadifar M., Front Public Health 6(), 2018
PMID: 29556492
Bragazzi NL, Gianfredi V, Villarini M, Rosselli R, Nasr A, Hussein A, Martini M, Behzadifar M., Front Public Health 6(), 2018
PMID: 29556492
Putative vaccine candidates and drug targets identified by reverse vaccinology and subtractive genomics approaches to control Haemophilus ducreyi, the causative agent of chancroid.
de Sarom A, Kumar Jaiswal A, Tiwari S, de Castro Oliveira L, Barh D, Azevedo V, Jose Oliveira C, de Castro Soares S., J R Soc Interface 15(142), 2018
PMID: 29792307
de Sarom A, Kumar Jaiswal A, Tiwari S, de Castro Oliveira L, Barh D, Azevedo V, Jose Oliveira C, de Castro Soares S., J R Soc Interface 15(142), 2018
PMID: 29792307
Immune-Informatic Analysis and Design of Peptide Vaccine From Multi-epitopes Against Corynebacterium pseudotuberculosis.
Droppa-Almeida D, Franceschi E, Padilha FF., Bioinform Biol Insights 12(), 2018
PMID: 29780242
Droppa-Almeida D, Franceschi E, Padilha FF., Bioinform Biol Insights 12(), 2018
PMID: 29780242
Rapidly evolving changes and gene loss associated with host switching in Corynebacterium pseudotuberculosis.
Viana MVC, Sahm A, Góes Neto A, Figueiredo HCP, Wattam AR, Azevedo V., PLoS One 13(11), 2018
PMID: 30419061
Viana MVC, Sahm A, Góes Neto A, Figueiredo HCP, Wattam AR, Azevedo V., PLoS One 13(11), 2018
PMID: 30419061
Complete genome sequence of Vibrio mimicus strain SCCF01 with potential application in fish vaccine development.
Yu Z, Geng Y, Wang K, Chen D, Huang X, Ou Y, Peng G., Virulence 8(6), 2017
PMID: 27763808
Yu Z, Geng Y, Wang K, Chen D, Huang X, Ou Y, Peng G., Virulence 8(6), 2017
PMID: 27763808
Genomic analysis of four strains of Corynebacterium pseudotuberculosis bv. Equi isolated from horses showing distinct signs of infection.
Baraúna RA, Ramos RTJ, Veras AAO, de Sá PHCG, Guimarães LC, das Graças DA, Carneiro AR, Edman JM, Spier SJ, Azevedo V, Silva A., Stand Genomic Sci 12(), 2017
PMID: 28163825
Baraúna RA, Ramos RTJ, Veras AAO, de Sá PHCG, Guimarães LC, das Graças DA, Carneiro AR, Edman JM, Spier SJ, Azevedo V, Silva A., Stand Genomic Sci 12(), 2017
PMID: 28163825
Exploration of Nitrate Reductase Metabolic Pathway in Corynebacterium pseudotuberculosis.
Almeida S, Sousa C, Abreu V, Diniz C, Dorneles EM, Lage AP, Barh D, Azevedo V., Int J Genomics 2017(), 2017
PMID: 28316974
Almeida S, Sousa C, Abreu V, Diniz C, Dorneles EM, Lage AP, Barh D, Azevedo V., Int J Genomics 2017(), 2017
PMID: 28316974
Antibiotic Resistance Determinant-Focused Acinetobacter baumannii Vaccine Designed Using Reverse Vaccinology.
Ni Z, Chen Y, Ong E, He Y., Int J Mol Sci 18(2), 2017
PMID: 28230771
Ni Z, Chen Y, Ong E, He Y., Int J Mol Sci 18(2), 2017
PMID: 28230771
Analyses of the probiotic property and stress resistance-related genes of Lactococcus lactis subsp. lactis NCDO 2118 through comparative genomics and in vitro assays.
Oliveira LC, Saraiva TD, Silva WM, Pereira UP, Campos BC, Benevides LJ, Rocha FS, Figueiredo HC, Azevedo V, Soares SC., PLoS One 12(4), 2017
PMID: 28384209
Oliveira LC, Saraiva TD, Silva WM, Pereira UP, Campos BC, Benevides LJ, Rocha FS, Figueiredo HC, Azevedo V, Soares SC., PLoS One 12(4), 2017
PMID: 28384209
Whole-Genome Sequence of Corynebacterium pseudotuberculosis PA04, Isolated from the Lymph Node of a Sheep in the Amazon, Brazil.
Costa WLO, Alves JTC, Dias LM, Araújo CLA, Morais E, Silva AGM, Andrade SS, Ramos RTJ, Silva A, Folador ARC., Genome Announc 5(16), 2017
PMID: 28428301
Costa WLO, Alves JTC, Dias LM, Araújo CLA, Morais E, Silva AGM, Andrade SS, Ramos RTJ, Silva A, Folador ARC., Genome Announc 5(16), 2017
PMID: 28428301
Comparative genomic analysis between Corynebacterium pseudotuberculosis strains isolated from buffalo.
Viana MVC, Figueiredo H, Ramos R, Guimarães LC, Pereira FL, Dorella FA, Selim SAK, Salaheldean M, Silva A, Wattam AR, Azevedo V., PLoS One 12(4), 2017
PMID: 28445543
Viana MVC, Figueiredo H, Ramos R, Guimarães LC, Pereira FL, Dorella FA, Selim SAK, Salaheldean M, Silva A, Wattam AR, Azevedo V., PLoS One 12(4), 2017
PMID: 28445543
Label-free quantitative proteomics of Corynebacterium pseudotuberculosis isolates reveals differences between Biovars ovis and equi strains.
Silva WM, Folador EL, Soares SC, Souza GHMF, Santos AV, Sousa CS, Figueiredo H, Miyoshi A, Le Loir Y, Silva A, Azevedo V., BMC Genomics 18(1), 2017
PMID: 28595597
Silva WM, Folador EL, Soares SC, Souza GHMF, Santos AV, Sousa CS, Figueiredo H, Miyoshi A, Le Loir Y, Silva A, Azevedo V., BMC Genomics 18(1), 2017
PMID: 28595597
Quantitative Proteomic Analysis Reveals Changes in the Benchmark Corynebacterium pseudotuberculosis Biovar Equi Exoproteome after Passage in a Murine Host.
Silva WM, Carvalho RDO, Dorella FA, Folador EL, Souza GHMF, Pimenta AMC, Figueiredo HCP, Le Loir Y, Silva A, Azevedo V., Front Cell Infect Microbiol 7(), 2017
PMID: 28791255
Silva WM, Carvalho RDO, Dorella FA, Folador EL, Souza GHMF, Pimenta AMC, Figueiredo HCP, Le Loir Y, Silva A, Azevedo V., Front Cell Infect Microbiol 7(), 2017
PMID: 28791255
Quadruplex PCR assay for identification of Corynebacterium pseudotuberculosis differentiating biovar Ovis and Equi.
Almeida S, Dorneles EMS, Diniz C, Abreu V, Sousa C, Alves J, Carneiro A, Bagano P, Spier S, Barh D, Lage AP, Figueiredo H, Azevedo V., BMC Vet Res 13(1), 2017
PMID: 28946887
Almeida S, Dorneles EMS, Diniz C, Abreu V, Sousa C, Alves J, Carneiro A, Bagano P, Spier S, Barh D, Lage AP, Figueiredo H, Azevedo V., BMC Vet Res 13(1), 2017
PMID: 28946887
Recombinant CP40 from Corynebacterium pseudotuberculosis confers protection in mice after challenge with a virulent strain.
Droppa-Almeida D, Vivas WL, Silva KK, Rezende AF, Simionatto S, Meyer R, Lima-Verde IB, Delagostin O, Borsuk S, Padilha FF., Vaccine 34(8), 2016
PMID: 26796140
Droppa-Almeida D, Vivas WL, Silva KK, Rezende AF, Simionatto S, Meyer R, Lima-Verde IB, Delagostin O, Borsuk S, Padilha FF., Vaccine 34(8), 2016
PMID: 26796140
SIMBA: a web tool for managing bacterial genome assembly generated by Ion PGM sequencing technology.
Mariano DC, Pereira FL, Aguiar EL, Oliveira LC, Benevides L, Guimarães LC, Folador EL, Sousa TJ, Ghosh P, Barh D, Figueiredo HC, Silva A, Ramos RT, Azevedo VA., BMC Bioinformatics 17(suppl 18), 2016
PMID: 28105921
Mariano DC, Pereira FL, Aguiar EL, Oliveira LC, Benevides L, Guimarães LC, Folador EL, Sousa TJ, Ghosh P, Barh D, Figueiredo HC, Silva A, Ramos RT, Azevedo VA., BMC Bioinformatics 17(suppl 18), 2016
PMID: 28105921
Corynebacterium pseudotuberculosis Pneumonia in a Veterinary Student Infected During Laboratory Work.
Heggelund L, Gaustad P, Håvelsrud OE, Blom J, Borgen L, Sundset A, Sørum H, Frøland SS., Open Forum Infect Dis 2(2), 2015
PMID: 26380345
Heggelund L, Gaustad P, Håvelsrud OE, Blom J, Borgen L, Sundset A, Sørum H, Frøland SS., Open Forum Infect Dis 2(2), 2015
PMID: 26380345
An integrated structural proteomics approach along the druggable genome of Corynebacterium pseudotuberculosis species for putative druggable targets.
Radusky LG, Hassan S, Lanzarotti E, Tiwari S, Jamal S, Ali J, Ali A, Ferreira R, Barh D, Silva A, Turjanski AG, Azevedo VA., BMC Genomics 16 Suppl 5(), 2015
PMID: 26041381
Radusky LG, Hassan S, Lanzarotti E, Tiwari S, Jamal S, Ali J, Ali A, Ferreira R, Barh D, Silva A, Turjanski AG, Azevedo VA., BMC Genomics 16 Suppl 5(), 2015
PMID: 26041381
Genome Sequence of Corynebacterium pseudotuberculosis MB20 bv. equi Isolated from a Pectoral Abscess of an Oldenburg Horse in California.
Baraúna RA, Guimarães LC, Veras AA, de Sá PH, Graças DA, Pinheiro KC, Silva AS, Folador EL, Benevides LJ, Viana MV, Carneiro AR, Schneider MP, Spier SJ, Edman JM, Ramos RT, Azevedo V, Silva A., Genome Announc 2(6), 2014
PMID: 25395628
Baraúna RA, Guimarães LC, Veras AA, de Sá PH, Graças DA, Pinheiro KC, Silva AS, Folador EL, Benevides LJ, Viana MV, Carneiro AR, Schneider MP, Spier SJ, Edman JM, Ramos RT, Azevedo V, Silva A., Genome Announc 2(6), 2014
PMID: 25395628
56 References
Daten bereitgestellt von Europe PubMed Central.
Corynebacterium pseudotuberculosis infection in horses: 538 cases (1982-1993).
Aleman M, Spier SJ, Wilson WD, Doherr M., J. Am. Vet. Med. Assoc. 209(4), 1996
PMID: 8756884
Aleman M, Spier SJ, Wilson WD, Doherr M., J. Am. Vet. Med. Assoc. 209(4), 1996
PMID: 8756884
BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisons.
Alikhan NF, Petty NK, Ben Zakour NL, Beatson SA., BMC Genomics 12(), 2011
PMID: 21824423
Alikhan NF, Petty NK, Ben Zakour NL, Beatson SA., BMC Genomics 12(), 2011
PMID: 21824423
HtaA is an iron-regulated hemin binding protein involved in the utilization of heme iron in Corynebacterium diphtheriae.
Allen CE, Schmitt MP., J. Bacteriol. 191(8), 2009
PMID: 19201805
Allen CE, Schmitt MP., J. Bacteriol. 191(8), 2009
PMID: 19201805
Overcoming the heme paradox: heme toxicity and tolerance in bacterial pathogens.
Anzaldi LL, Skaar EP., Infect. Immun. 78(12), 2010
PMID: 20679437
Anzaldi LL, Skaar EP., Infect. Immun. 78(12), 2010
PMID: 20679437
Prevalence of and carcass condemnation from maedi-visna, paratuberculosis and caseous lymphadenitis in culled sheep from Quebec, Canada.
Arsenault J, Girard C, Dubreuil P, Daignault D, Galarneau JR, Boisclair J, Simard C, Belanger D., Prev. Vet. Med. 59(1-2), 2003
PMID: 12719018
Arsenault J, Girard C, Dubreuil P, Daignault D, Galarneau JR, Boisclair J, Simard C, Belanger D., Prev. Vet. Med. 59(1-2), 2003
PMID: 12719018
Survival of Corynebacterium pseudotuberculosis in axenic purulent exudate on common barnyard fomites.
Augustine JL, Renshaw HW., Am. J. Vet. Res. 47(4), 1986
PMID: 3963574
Augustine JL, Renshaw HW., Am. J. Vet. Res. 47(4), 1986
PMID: 3963574
Two serotypes of Corynebacterium pseudotuberculosis isolated from different animal species
Barakat, Revue Scientifique et Technique de l’OIE 3(), 1984
Barakat, Revue Scientifique et Technique de l’OIE 3(), 1984
A novel comparative genomics analysis for common drug and vaccine targets in Corynebacterium pseudotuberculosis and other CMN group of human pathogens.
Barh D, Jain N, Tiwari S, Parida BP, D'Afonseca V, Li L, Ali A, Santos AR, Guimaraes LC, de Castro Soares S, Miyoshi A, Bhattacharjee A, Misra AN, Silva A, Kumar A, Azevedo V., Chem Biol Drug Des 78(1), 2011
PMID: 21443692
Barh D, Jain N, Tiwari S, Parida BP, D'Afonseca V, Li L, Ali A, Santos AR, Guimaraes LC, de Castro Soares S, Miyoshi A, Bhattacharjee A, Misra AN, Silva A, Kumar A, Azevedo V., Chem Biol Drug Des 78(1), 2011
PMID: 21443692
Prediction of surface exposed proteins in Streptococcus pyogenes, with a potential application to other Gram-positive bacteria.
Barinov A, Loux V, Hammani A, Nicolas P, Langella P, Ehrlich D, Maguin E, van de Guchte M., Proteomics 9(1), 2009
PMID: 19053137
Barinov A, Loux V, Hammani A, Nicolas P, Langella P, Ehrlich D, Maguin E, van de Guchte M., Proteomics 9(1), 2009
PMID: 19053137
Two biotypes of Corynebacterium pseudotuberculosis.
Biberstein EL, Knight HD, Jang S., Vet. Rec. 89(26), 1971
PMID: 5168555
Biberstein EL, Knight HD, Jang S., Vet. Rec. 89(26), 1971
PMID: 5168555
The role of resuscitation promoting factors in pathogenesis and reactivation of Mycobacterium tuberculosis during intra-peritoneal infection in mice.
Biketov S, Potapov V, Ganina E, Downing K, Kana BD, Kaprelyants A., BMC Infect. Dis. 7(), 2007
PMID: 18086300
Biketov S, Potapov V, Ganina E, Downing K, Kana BD, Kaprelyants A., BMC Infect. Dis. 7(), 2007
PMID: 18086300
Effect of muramyl dipeptide on immunogenicity of Corynebacterium pseudotuberculosis whole-cell vaccines in mice and lambs.
Brogden KA, Chedid L, Cutlip RC, Lehmkuhl HD, Sacks J., Am. J. Vet. Res. 51(2), 1990
PMID: 2301830
Brogden KA, Chedid L, Cutlip RC, Lehmkuhl HD, Sacks J., Am. J. Vet. Res. 51(2), 1990
PMID: 2301830
ACT: the Artemis comparison tool
Carver, Bioinformatics 16(), 2005
Carver, Bioinformatics 16(), 2005
Rapid hybrid de novo assembly of a microbial genome using only short reads: Corynebacterium pseudotuberculosis I19 as a case study.
Cerdeira LT, Carneiro AR, Ramos RT, de Almeida SS, D'Afonseca V, Schneider MP, Baumbach J, Tauch A, McCulloch JA, Azevedo VA, Silva A., J. Microbiol. Methods 86(2), 2011
PMID: 21620904
Cerdeira LT, Carneiro AR, Ramos RT, de Almeida SS, D'Afonseca V, Schneider MP, Baumbach J, Tauch A, McCulloch JA, Azevedo VA, Silva A., J. Microbiol. Methods 86(2), 2011
PMID: 21620904
Complete genome sequence of Corynebacterium pseudotuberculosis strain CIP 52.97, isolated from a horse in Kenya.
Cerdeira LT, Schneider MP, Pinto AC, de Almeida SS, dos Santos AR, Barbosa EG, Ali A, Aburjaile FF, de Abreu VA, Guimaraes LC, Soares Sde C, Dorella FA, Rocha FS, Bol E, Gomes de Sa PH, Lopes TS, Barbosa MS, Carneiro AR, Juca Ramos RT, Coimbra NA, Lima AR, Barh D, Jain N, Tiwari S, Raja R, Zambare V, Ghosh P, Trost E, Tauch A, Miyoshi A, Azevedo V, Silva A., J. Bacteriol. 193(24), 2011
PMID: 22123771
Cerdeira LT, Schneider MP, Pinto AC, de Almeida SS, dos Santos AR, Barbosa EG, Ali A, Aburjaile FF, de Abreu VA, Guimaraes LC, Soares Sde C, Dorella FA, Rocha FS, Bol E, Gomes de Sa PH, Lopes TS, Barbosa MS, Carneiro AR, Juca Ramos RT, Coimbra NA, Lima AR, Barh D, Jain N, Tiwari S, Raja R, Zambare V, Ghosh P, Trost E, Tauch A, Miyoshi A, Azevedo V, Silva A., J. Bacteriol. 193(24), 2011
PMID: 22123771
The structure of the ferric siderophore binding protein FhuD complexed with gallichrome
Clarke, Natural Structural Biology 7(), 2000
Clarke, Natural Structural Biology 7(), 2000
Nitrate reduction to ammonia by enteric bacteria: redundancy, or a strategy for survival during oxygen starvation?
Cole J., FEMS Microbiol. Lett. 136(1), 1996
PMID: 8919448
Cole J., FEMS Microbiol. Lett. 136(1), 1996
PMID: 8919448
Conserved mechanism of copper binding and transfer. A comparison of the copper-resistance proteins PcoC from Escherichia coli and CopC from Pseudomonas syringae.
Djoko KY, Xiao Z, Huffman DL, Wedd AG., Inorg Chem 46(11), 2007
PMID: 17477524
Djoko KY, Xiao Z, Huffman DL, Wedd AG., Inorg Chem 46(11), 2007
PMID: 17477524
Antigens of Corynebacterium pseudotuberculosis and prospects for vaccine development.
Dorella FA, Pacheco LG, Seyffert N, Portela RW, Meyer R, Miyoshi A, Azevedo V., Expert Rev Vaccines 8(2), 2009
PMID: 19196200
Dorella FA, Pacheco LG, Seyffert N, Portela RW, Meyer R, Miyoshi A, Azevedo V., Expert Rev Vaccines 8(2), 2009
PMID: 19196200
Corynebacterium pseudotuberculosis: microbiology, biochemical properties, pathogenesis and molecular studies of virulence.
Dorella FA, Pacheco LG, Oliveira SC, Miyoshi A, Azevedo V., Vet. Res. 37(2), 2006
PMID: 16472520
Dorella FA, Pacheco LG, Oliveira SC, Miyoshi A, Azevedo V., Vet. Res. 37(2), 2006
PMID: 16472520
Investigation of the genes involved in antigenic switching at the vlsE locus in Borrelia burgdorferi: an essential role for the RuvAB branch migrase.
Dresser AR, Hardy PO, Chaconas G., PLoS Pathog. 5(12), 2009
PMID: 19997508
Dresser AR, Hardy PO, Chaconas G., PLoS Pathog. 5(12), 2009
PMID: 19997508
Immunisation against ovine caseous lymphadenitis: comparison of Corynebacterium pseudotuberculosis vaccines with and without bacterial cells.
Eggleton DG, Middleton HD, Doidge CV, Minty DW., Aust. Vet. J. 68(10), 1991
PMID: 1755781
Eggleton DG, Middleton HD, Doidge CV, Minty DW., Aust. Vet. J. 68(10), 1991
PMID: 1755781
Antigen specificity of antibody responses to Corynebacterium pseudotuberculosis in naturally infected sheep with caseous lymphadenitis.
Ellis JA, Hawk DA, Mills KW, Pratt DL., Vet. Immunol. Immunopathol. 28(3-4), 1991
PMID: 1719692
Ellis JA, Hawk DA, Mills KW, Pratt DL., Vet. Immunol. Immunopathol. 28(3-4), 1991
PMID: 1719692
Penicillin-binding proteins in bacteria.
Georgopapadakou NH, Liu FY., Antimicrob. Agents Chemother. 18(1), 1980
PMID: 7416741
Georgopapadakou NH, Liu FY., Antimicrob. Agents Chemother. 18(1), 1980
PMID: 7416741
Physiological functions of D-alanine carboxypeptidases in Escherichia coli.
Ghosh AS, Chowdhury C, Nelson DE., Trends Microbiol. 16(7), 2008
PMID: 18539032
Ghosh AS, Chowdhury C, Nelson DE., Trends Microbiol. 16(7), 2008
PMID: 18539032
Vaxign: the first web-based vaccine design program for reverse vaccinology and applications for vaccine development
He, Journal of Biomedicine and Biotechnology 2010(), 2010
He, Journal of Biomedicine and Biotechnology 2010(), 2010
De novo bacterial genome sequencing: millions of very short reads assembled on a desktop computer.
Hernandez D, Francois P, Farinelli L, Osteras M, Schrenzel J., Genome Res. 18(5), 2008
PMID: 18332092
Hernandez D, Francois P, Farinelli L, Osteras M, Schrenzel J., Genome Res. 18(5), 2008
PMID: 18332092
Efficacy of an ovine caseous lymphadenitis vaccine formulated using a genetically inactive form of the Corynebacterium pseudotuberculosis phospholipase D.
Hodgson AL, Carter K, Tachedjian M, Krywult J, Corner LA, McColl M, Cameron A., Vaccine 17(7-8), 1999
PMID: 10067685
Hodgson AL, Carter K, Tachedjian M, Krywult J, Corner LA, McColl M, Cameron A., Vaccine 17(7-8), 1999
PMID: 10067685
Corynebacterium pseudotuberculosis infection in goats. IX. The effect of vaccination against natural infection.
Holstad G., Acta Vet. Scand. 30(3), 1989
PMID: 2629505
Holstad G., Acta Vet. Scand. 30(3), 1989
PMID: 2629505
Jones, 1986
RNAmmer: consistent and rapid annotation of ribosomal RNA genes.
Lagesen K, Hallin P, Rodland EA, Staerfeldt HH, Rognes T, Ussery DW., Nucleic Acids Res. 35(9), 2007
PMID: 17452365
Lagesen K, Hallin P, Rodland EA, Staerfeldt HH, Rognes T, Ussery DW., Nucleic Acids Res. 35(9), 2007
PMID: 17452365
Efficacy of Corynebacterium pseudotuberculosis bacterin for the immunologic protection of sheep against development of caseous lymphadenitis.
LeaMaster BR, Shen DT, Gorham JR, Leathers CW, Wells HD., Am. J. Vet. Res. 48(5), 1987
PMID: 3592392
LeaMaster BR, Shen DT, Gorham JR, Leathers CW, Wells HD., Am. J. Vet. Res. 48(5), 1987
PMID: 3592392
tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.
Lowe TM, Eddy SR., Nucleic Acids Res. 25(5), 1997
PMID: 9023104
Lowe TM, Eddy SR., Nucleic Acids Res. 25(5), 1997
PMID: 9023104
Host cell adhesion to Schistosoma mansoni larvae in the peritoneal cavity of naive mice. Histological and scanning electron microscopic studies
Melo, Revista do Instituto de Medicina Tropical de São Paulo 35(1), 1993
Melo, Revista do Instituto de Medicina Tropical de São Paulo 35(1), 1993
Prevalence of caseous lymphadenitis and usage of caseous lymphadenitis vaccines in sheep flocks.
Paton MW, Walker SB, Rose IR, Watt GF., Aust. Vet. J. 81(1-2), 2003
PMID: 15084020
Paton MW, Walker SB, Rose IR, Watt GF., Aust. Vet. J. 81(1-2), 2003
PMID: 15084020
Evaluation of clinical characteristics, diagnostic test results, and outcome in horses with internal infection caused by Corynebacterium pseudotuberculosis: 30 cases (1995-2003).
Pratt SM, Spier SJ, Carroll SP, Vaughan B, Whitcomb MB, Wilson WD., J. Am. Vet. Med. Assoc. 227(3), 2005
PMID: 16121612
Pratt SM, Spier SJ, Carroll SP, Vaughan B, Whitcomb MB, Wilson WD., J. Am. Vet. Med. Assoc. 227(3), 2005
PMID: 16121612
The ABCDs of periplasmic copper trafficking.
Puig S, Rees EM, Thiele DJ., Structure 10(10), 2002
PMID: 12377116
Puig S, Rees EM, Thiele DJ., Structure 10(10), 2002
PMID: 12377116
Analysis of quality raw data of second generation sequencers with Quality Assessment Software.
Ramos RT, Carneiro AR, Baumbach J, Azevedo V, Schneider MP, Silva A., BMC Res Notes 4(), 2011
PMID: 21501521
Ramos RT, Carneiro AR, Baumbach J, Azevedo V, Schneider MP, Silva A., BMC Res Notes 4(), 2011
PMID: 21501521
Reverse vaccinology, a genome-based approach to vaccine development.
Rappuoli R., Vaccine 19(17-19), 2001
PMID: 11257410
Rappuoli R., Vaccine 19(17-19), 2001
PMID: 11257410
Potential of Mycobacterium tuberculosis resuscitation-promoting factors as antigens in novel tuberculosis sub-unit vaccines.
Romano M, Aryan E, Korf H, Bruffaerts N, Franken CL, Ottenhoff TH, Huygen K., Microbes Infect. 14(1), 2011
PMID: 21920450
Romano M, Aryan E, Korf H, Bruffaerts N, Franken CL, Ottenhoff TH, Huygen K., Microbes Infect. 14(1), 2011
PMID: 21920450
Evidence for reductive genome evolution and lateral acquisition of virulence functions in two Corynebacterium pseudotuberculosis strains.
Ruiz JC, D'Afonseca V, Silva A, Ali A, Pinto AC, Santos AR, Rocha AA, Lopes DO, Dorella FA, Pacheco LG, Costa MP, Turk MZ, Seyffert N, Moraes PM, Soares SC, Almeida SS, Castro TL, Abreu VA, Trost E, Baumbach J, Tauch A, Schneider MP, McCulloch J, Cerdeira LT, Ramos RT, Zerlotini A, Dominitini A, Resende DM, Coser EM, Oliveira LM, Pedrosa AL, Vieira CU, Guimaraes CT, Bartholomeu DC, Oliveira DM, Santos FR, Rabelo EM, Lobo FP, Franco GR, Costa AF, Castro IM, Dias SR, Ferro JA, Ortega JM, Paiva LV, Goulart LR, Almeida JF, Ferro MI, Carneiro NP, Falcao PR, Grynberg P, Teixeira SM, Brommonschenkel S, Oliveira SC, Meyer R, Moore RJ, Miyoshi A, Oliveira GC, Azevedo V., PLoS ONE 6(4), 2011
PMID: 21533164
Ruiz JC, D'Afonseca V, Silva A, Ali A, Pinto AC, Santos AR, Rocha AA, Lopes DO, Dorella FA, Pacheco LG, Costa MP, Turk MZ, Seyffert N, Moraes PM, Soares SC, Almeida SS, Castro TL, Abreu VA, Trost E, Baumbach J, Tauch A, Schneider MP, McCulloch J, Cerdeira LT, Ramos RT, Zerlotini A, Dominitini A, Resende DM, Coser EM, Oliveira LM, Pedrosa AL, Vieira CU, Guimaraes CT, Bartholomeu DC, Oliveira DM, Santos FR, Rabelo EM, Lobo FP, Franco GR, Costa AF, Castro IM, Dias SR, Ferro JA, Ortega JM, Paiva LV, Goulart LR, Almeida JF, Ferro MI, Carneiro NP, Falcao PR, Grynberg P, Teixeira SM, Brommonschenkel S, Oliveira SC, Meyer R, Moore RJ, Miyoshi A, Oliveira GC, Azevedo V., PLoS ONE 6(4), 2011
PMID: 21533164
Artemis: sequence visualization and annotation.
Rutherford K, Parkhill J, Crook J, Horsnell T, Rice P, Rajandream MA, Barrell B., Bioinformatics 16(10), 2000
PMID: 11120685
Rutherford K, Parkhill J, Crook J, Horsnell T, Rice P, Rajandream MA, Barrell B., Bioinformatics 16(10), 2000
PMID: 11120685
Phospholipase D: enzymology, functionality, and chemical modulation.
Selvy PE, Lavieri RR, Lindsley CW, Brown HA., Chem. Rev. 111(10), 2011
PMID: 21936578
Selvy PE, Lavieri RR, Lindsley CW, Brown HA., Chem. Rev. 111(10), 2011
PMID: 21936578
MalE of group A Streptococcus participates in the rapid transport of maltotriose and longer maltodextrins.
Shelburne SA 3rd, Fang H, Okorafor N, Sumby P, Sitkiewicz I, Keith D, Patel P, Austin C, Graviss EA, Musser JM, Chow DC., J. Bacteriol. 189(7), 2007
PMID: 17259319
Shelburne SA 3rd, Fang H, Okorafor N, Sumby P, Sitkiewicz I, Keith D, Patel P, Austin C, Graviss EA, Musser JM, Chow DC., J. Bacteriol. 189(7), 2007
PMID: 17259319
PIPS: pathogenicity island prediction software.
Soares SC, Abreu VA, Ramos RT, Cerdeira L, Silva A, Baumbach J, Trost E, Tauch A, Hirata R Jr, Mattos-Guaraldi AL, Miyoshi A, Azevedo V., PLoS ONE 7(2), 2012
PMID: 22355329
Soares SC, Abreu VA, Ramos RT, Cerdeira L, Silva A, Baumbach J, Trost E, Tauch A, Hirata R Jr, Mattos-Guaraldi AL, Miyoshi A, Azevedo V., PLoS ONE 7(2), 2012
PMID: 22355329
Ulcerative lymphangitis and coronet lesions in an Israeli dairy herd infected with Corynebacterium pseudotuberculosis
Steinman, Veterinary Record 145(), 1999
Steinman, Veterinary Record 145(), 1999
Comparative analysis of two complete Corynebacterium ulcerans genomes and detection of candidate virulence factors.
Trost E, Al-Dilaimi A, Papavasiliou P, Schneider J, Viehoever P, Burkovski A, Soares SC, Almeida SS, Dorella FA, Miyoshi A, Azevedo V, Schneider MP, Silva A, Santos CS, Santos LS, Sabbadini P, Dias AA, Hirata R Jr, Mattos-Guaraldi AL, Tauch A., BMC Genomics 12(), 2011
PMID: 21801446
Trost E, Al-Dilaimi A, Papavasiliou P, Schneider J, Viehoever P, Burkovski A, Soares SC, Almeida SS, Dorella FA, Miyoshi A, Azevedo V, Schneider MP, Silva A, Santos CS, Santos LS, Sabbadini P, Dias AA, Hirata R Jr, Mattos-Guaraldi AL, Tauch A., BMC Genomics 12(), 2011
PMID: 21801446
The complete genome sequence of Corynebacterium pseudotuberculosis FRC41 isolated from a 12-year-old girl with necrotizing lymphadenitis reveals insights into gene-regulatory networks contributing to virulence.
Trost E, Ott L, Schneider J, Schroder J, Jaenicke S, Goesmann A, Husemann P, Stoye J, Dorella FA, Rocha FS, Soares Sde C, D'Afonseca V, Miyoshi A, Ruiz J, Silva A, Azevedo V, Burkovski A, Guiso N, Join-Lambert OF, Kayal S, Tauch A., BMC Genomics 11(), 2010
PMID: 21192786
Trost E, Ott L, Schneider J, Schroder J, Jaenicke S, Goesmann A, Husemann P, Stoye J, Dorella FA, Rocha FS, Soares Sde C, D'Afonseca V, Miyoshi A, Ruiz J, Silva A, Azevedo V, Burkovski A, Guiso N, Join-Lambert OF, Kayal S, Tauch A., BMC Genomics 11(), 2010
PMID: 21192786
Improving draft assemblies by iterative mapping and assembly of short reads to eliminate gaps.
Tsai IJ, Otto TD, Berriman M., Genome Biol. 11(4), 2010
PMID: 20388197
Tsai IJ, Otto TD, Berriman M., Genome Biol. 11(4), 2010
PMID: 20388197
Deletion of the Mycobacterium tuberculosis resuscitation-promoting factor Rv1009 gene results in delayed reactivation from chronic tuberculosis.
Tufariello JM, Mi K, Xu J, Manabe YC, Kesavan AK, Drumm J, Tanaka K, Jacobs WR Jr, Chan J., Infect. Immun. 74(5), 2006
PMID: 16622237
Tufariello JM, Mi K, Xu J, Manabe YC, Kesavan AK, Drumm J, Tanaka K, Jacobs WR Jr, Chan J., Infect. Immun. 74(5), 2006
PMID: 16622237
Caseous lymphadenitis in small ruminants
Williamson, Veterinary Clinics of North America: Food Animal Practice 17(), 2001
Williamson, Veterinary Clinics of North America: Food Animal Practice 17(), 2001
Control of caseous lymphadenitis
Windsor, Veterinary Clinics of North America: Food Animal Practice 27(), 2011
Windsor, Veterinary Clinics of North America: Food Animal Practice 27(), 2011
Corynebacterium pseudotuberculosis infection in Israeli dairy cattle.
Yeruham I, Elad D, Friedman S, Perl S., Epidemiol. Infect. 131(2), 2003
PMID: 14596537
Yeruham I, Elad D, Friedman S, Perl S., Epidemiol. Infect. 131(2), 2003
PMID: 14596537
A herd level analysis of a Corynebacterium pseudotuberculosis outbreak in a dairy cattle herd.
Yeruham I, Friedman S, Perl S, Elad D, Berkovich Y, Kalgard Y., Vet. Dermatol. 15(5), 2004
PMID: 15500484
Yeruham I, Friedman S, Perl S, Elad D, Berkovich Y, Kalgard Y., Vet. Dermatol. 15(5), 2004
PMID: 15500484
InterProScan--an integration platform for the signature-recognition methods in InterPro.
Zdobnov EM, Apweiler R., Bioinformatics 17(9), 2001
PMID: 11590104
Zdobnov EM, Apweiler R., Bioinformatics 17(9), 2001
PMID: 11590104
Velvet: algorithms for de novo short read assembly using de Bruijn graphs.
Zerbino DR, Birney E., Genome Res. 18(5), 2008
PMID: 18349386
Zerbino DR, Birney E., Genome Res. 18(5), 2008
PMID: 18349386
Export
Markieren/ Markierung löschen
Markierte Publikationen
Web of Science
Dieser Datensatz im Web of Science®Quellen
PMID: 23201561
PubMed | Europe PMC
Suchen in
Google Scholar