Draft Genome of Streptomyces tsukubaensis NRRL 18488, the Producer of the Clinically Important Immunosuppressant Tacrolimus (FK506)

Barreiro C, Prieto C, Sola-Landa A, Solera E, Martinez-Castro M, Perez-Redondo R, Garcia-Estrada C, Aparicio JF, Fernandez-Martinez LT, Santos-Aberturas J, Salehi-Najafabadi Z, et al. (2012)
Journal of bacteriology 194(14): 3756-3757.

Zeitschriftenaufsatz | Veröffentlicht | Englisch
 
Download
Es wurden keine Dateien hochgeladen. Nur Publikationsnachweis!
DOI
Autor*in
Barreiro, Carlos; Prieto, Carlos; Sola-Landa, Alberto; Solera, Elena; Martinez-Castro, Miriam; Perez-Redondo, Rosario; Garcia-Estrada, Carlos; Aparicio, Jesus F; Fernandez-Martinez, Lorena T; Santos-Aberturas, Javier; Salehi-Najafabadi, Zahra; Rodriguez-Garcia, Antonio
Alle
Einrichtung
Centrum für Biotechnologie > Arbeitsgruppe A. Tauch
Abstract / Bemerkung
The macrocyclic polyketide tacrolimus (FK506) is a potent immunosuppressant that prevents T-cell proliferation produced solely by Streptomyces species. We report here the first draft genome sequence of a true FK506 producer, Streptomyces tsukubaensis NRRL 18488, the first tacrolimus-producing strain that was isolated and that contains the full tacrolimus biosynthesis gene cluster.
Erscheinungsjahr
2012
Zeitschriftentitel
Journal of bacteriology
Band
194
Ausgabe
14
Seite(n)
3756-3757
ISSN
0021-9193
Page URI
https://pub.uni-bielefeld.de/record/2513207

Zitieren

Barreiro C, Prieto C, Sola-Landa A, et al. Draft Genome of Streptomyces tsukubaensis NRRL 18488, the Producer of the Clinically Important Immunosuppressant Tacrolimus (FK506). Journal of bacteriology. 2012;194(14):3756-3757.
Barreiro, C., Prieto, C., Sola-Landa, A., Solera, E., Martinez-Castro, M., Perez-Redondo, R., Garcia-Estrada, C., et al. (2012). Draft Genome of Streptomyces tsukubaensis NRRL 18488, the Producer of the Clinically Important Immunosuppressant Tacrolimus (FK506). Journal of bacteriology, 194(14), 3756-3757. doi:10.1128/JB.00692-12
Barreiro, Carlos, Prieto, Carlos, Sola-Landa, Alberto, Solera, Elena, Martinez-Castro, Miriam, Perez-Redondo, Rosario, Garcia-Estrada, Carlos, et al. 2012. “Draft Genome of Streptomyces tsukubaensis NRRL 18488, the Producer of the Clinically Important Immunosuppressant Tacrolimus (FK506)”. Journal of bacteriology 194 (14): 3756-3757.
Barreiro, C., Prieto, C., Sola-Landa, A., Solera, E., Martinez-Castro, M., Perez-Redondo, R., Garcia-Estrada, C., Aparicio, J. F., Fernandez-Martinez, L. T., Santos-Aberturas, J., et al. (2012). Draft Genome of Streptomyces tsukubaensis NRRL 18488, the Producer of the Clinically Important Immunosuppressant Tacrolimus (FK506). Journal of bacteriology 194, 3756-3757.
Barreiro, C., et al., 2012. Draft Genome of Streptomyces tsukubaensis NRRL 18488, the Producer of the Clinically Important Immunosuppressant Tacrolimus (FK506). Journal of bacteriology, 194(14), p 3756-3757.
C. Barreiro, et al., “Draft Genome of Streptomyces tsukubaensis NRRL 18488, the Producer of the Clinically Important Immunosuppressant Tacrolimus (FK506)”, Journal of bacteriology, vol. 194, 2012, pp. 3756-3757.
Barreiro, C., Prieto, C., Sola-Landa, A., Solera, E., Martinez-Castro, M., Perez-Redondo, R., Garcia-Estrada, C., Aparicio, J.F., Fernandez-Martinez, L.T., Santos-Aberturas, J., Salehi-Najafabadi, Z., Rodriguez-Garcia, A., Tauch, A., Martin, J.F.: Draft Genome of Streptomyces tsukubaensis NRRL 18488, the Producer of the Clinically Important Immunosuppressant Tacrolimus (FK506). Journal of bacteriology. 194, 3756-3757 (2012).
Barreiro, Carlos, Prieto, Carlos, Sola-Landa, Alberto, Solera, Elena, Martinez-Castro, Miriam, Perez-Redondo, Rosario, Garcia-Estrada, Carlos, Aparicio, Jesus F, Fernandez-Martinez, Lorena T, Santos-Aberturas, Javier, Salehi-Najafabadi, Zahra, Rodriguez-Garcia, Antonio, Tauch, Andreas, and Martin, Juan F. “Draft Genome of Streptomyces tsukubaensis NRRL 18488, the Producer of the Clinically Important Immunosuppressant Tacrolimus (FK506)”. Journal of bacteriology 194.14 (2012): 3756-3757.

20 Zitationen in Europe PMC

Daten bereitgestellt von Europe PubMed Central.

Unraveling Nutritional Regulation of Tacrolimus Biosynthesis in Streptomyces tsukubaensis through omic Approaches.
Ordóñez-Robles M, Santos-Beneit F, Martín JF., Antibiotics (Basel) 7(2), 2018
PMID: 29724001
Analysis and validation of the pho regulon in the tacrolimus-producer strain Streptomyces tsukubaensis: differences with the model organism Streptomyces coelicolor.
Martínez-Castro M, Barreiro C, Martín JF., Appl Microbiol Biotechnol 102(16), 2018
PMID: 29948118
Comparative proteomic and metabolomic analysis of Streptomyces tsukubaensis reveals the metabolic mechanism of FK506 overproduction by feeding soybean oil.
Wang J, Liu H, Huang D, Jin L, Wang C, Wen J., Appl Microbiol Biotechnol 101(6), 2017
PMID: 28175948
dRNA-seq transcriptional profiling of the FK506 biosynthetic gene cluster in Streptomyces tsukubaensis NRRL18488 and general analysis of the transcriptome.
Bauer JS, Fillinger S, Förstner K, Herbig A, Jones AC, Flinspach K, Sharma C, Gross H, Nieselt K, Apel AK., RNA Biol 14(11), 2017
PMID: 28665778
Combining metabolomics and network analysis to improve tacrolimus production in Streptomyces tsukubaensis using different exogenous feedings.
Wang C, Liu J, Liu H, Liang S, Wen J., J Ind Microbiol Biotechnol 44(11), 2017
PMID: 28776273
Genetic manipulation of secondary metabolite biosynthesis for improved production in Streptomyces and other actinomycetes.
Baltz RH., J Ind Microbiol Biotechnol 43(2-3), 2016
PMID: 26364200
Biotypes analysis of Corynebacterium glutamicum growing in dicarboxylic acids demonstrates the existence of industrially-relevant intra-species variations.
Pérez-García F, Vasco-Cárdenas MF, Barreiro C., J Proteomics 146(), 2016
PMID: 27371347
Genome sequence and genome mining of a marine-derived antifungal bacterium Streptomyces sp. M10.
Tang J, Liu X, Peng J, Tang Y, Zhang Y., Appl Microbiol Biotechnol 99(6), 2015
PMID: 25687447
Roles of the crotonyl-CoA carboxylase/reductase homologues in acetate assimilation and biosynthesis of immunosuppressant FK506 in Streptomyces tsukubaensis.
Blažič M, Kosec G, Baebler Š, Gruden K, Petković H., Microb Cell Fact 14(), 2015
PMID: 26466669
Trends in the biosynthesis and production of the immunosuppressant tacrolimus (FK506).
Barreiro C, Martínez-Castro M., Appl Microbiol Biotechnol 98(2), 2014
PMID: 24272367
Microbial co-culture: harnessing intermicrobial signaling for the production of novel antimicrobials.
Moody SC., Future Microbiol 9(5), 2014
PMID: 24957083
The gamma-butyrolactone receptors BulR1 and BulR2 of Streptomyces tsukubaensis: tacrolimus (FK506) and butyrolactone synthetases production control.
Salehi-Najafabadi Z, Barreiro C, Rodríguez-García A, Cruz A, López GE, Martín JF., Appl Microbiol Biotechnol 98(11), 2014
PMID: 24562179
Taxonomy and chemically semi-defined media for the analysis of the tacrolimus producer 'Streptomyces tsukubaensis'.
Martínez-Castro M, Salehi-Najafabadi Z, Romero F, Pérez-Sanchiz R, Fernández-Chimeno RI, Martín JF, Barreiro C., Appl Microbiol Biotechnol 97(5), 2013
PMID: 22990582
Streptomyces tsukubensis sp. nov., a producer of the immunosuppressant tacrolimus.
Muramatsu H, Nagai K., J Antibiot (Tokyo) 66(4), 2013
PMID: 23299187
Genome-scale metabolic network guided engineering of Streptomyces tsukubaensis for FK506 production improvement.
Huang D, Li S, Xia M, Wen J, Jia X., Microb Cell Fact 12(), 2013
PMID: 23705993
Nonproteinogenic amino acid building blocks for nonribosomal peptide and hybrid polyketide scaffolds.
Walsh CT, O'Brien RV, Khosla C., Angew Chem Int Ed Engl 52(28), 2013
PMID: 23729217
Phage p1-derived artificial chromosomes facilitate heterologous expression of the FK506 gene cluster.
Jones AC, Gust B, Kulik A, Heide L, Buttner MJ, Bibb MJ., PLoS One 8(7), 2013
PMID: 23874942
Expression of the endogenous and heterologous clavulanic acid cluster in Streptomyces flavogriseus: why a silent cluster is sleeping.
Alvarez-Álvarez R, Martínez-Burgo Y, Pérez-Redondo R, Braña AF, Martín JF, Liras P., Appl Microbiol Biotechnol 97(21), 2013
PMID: 23974366
Understanding and manipulating antibiotic production in actinomycetes.
Bibb MJ., Biochem Soc Trans 41(6), 2013
PMID: 24256223
Annotation of the modular polyketide synthase and nonribosomal peptide synthetase gene clusters in the genome of Streptomyces tsukubaensis NRRL18488.
Blazic M, Starcevic A, Lisfi M, Baranasic D, Goranovic D, Fujs S, Kuscer E, Kosec G, Petkovic H, Cullum J, Hranueli D, Zucko J., Appl Environ Microbiol 78(23), 2012
PMID: 22983969

8 References

Daten bereitgestellt von Europe PubMed Central.

Primary metabolism and its control in streptomycetes: a most unusual group of bacteria.
Hodgson DA., Adv. Microb. Physiol. 42(), 2000
PMID: 10907551

Kieser T, Bibb MJ, Buttner MJ, Chater KF, Hopwood DA., 2000
FK-506, a novel immunosuppressant isolated from a Streptomyces. I. Fermentation, isolation, and physico-chemical and biological characteristics.
Kino T, Hatanaka H, Hashimoto M, Nishiyama M, Goto T, Okuhara M, Kohsaka M, Aoki H, Imanaka H., J. Antibiot. 40(9), 1987
PMID: 2445721
Efficient pyramidal arrangement of an ordered cosmid library: Rapid screening of genes of the tacrolimus-producer Streptomyces sp. ATCC 55098.
Martinez-Castro M, Solera E, Martin JF, Barreiro C., J. Microbiol. Methods 78(2), 2009
PMID: 19445977
Engineering of regulatory cascades and networks controlling antibiotic biosynthesis in Streptomyces.
Martin JF, Liras P., Curr. Opin. Microbiol. 13(3), 2010
PMID: 20303823
antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences.
Medema MH, Blin K, Cimermancic P, de Jager V, Zakrzewski P, Fischbach MA, Weber T, Takano E, Breitling R., Nucleic Acids Res. 39(Web Server issue), 2011
PMID: 21672958
Genome sequence of the streptomycin-producing microorganism Streptomyces griseus IFO 13350.
Ohnishi Y, Ishikawa J, Hara H, Suzuki H, Ikenoya M, Ikeda H, Yamashita A, Hattori M, Horinouchi S., J. Bacteriol. 190(11), 2008
PMID: 18375553
NRPSsp: non-ribosomal peptide synthase substrate predictor.
Prieto C, Garcia-Estrada C, Lorenzana D, Martin JF., Bioinformatics 28(3), 2011
PMID: 22130593
Export

Markieren/ Markierung löschen
Markierte Publikationen

Open Data PUB

Web of Science

Dieser Datensatz im Web of Science®
Quellen

PMID: 22740677
PubMed | Europe PMC

Suchen in

Google Scholar