Binding of the IclR-type regulator HutR in the histidine utilization (hut) gene cluster of the human pathogen Corynebacterium resistens DSM 45100
Schröder J, Maus I, Ostermann AL, Kogler AC, Tauch A (2012)
FEMS Microbiology Letters 331(2): 136-143.
Zeitschriftenaufsatz
| Veröffentlicht | Englisch
Download
Es wurden keine Dateien hochgeladen. Nur Publikationsnachweis!
Autor*in
Schröder, JasminUniBi;
Maus, Irena;
Ostermann, Anna Lena;
Kogler, Anna Christina;
Tauch, AndreasUniBi
Abstract / Bemerkung
The genome of the human pathogen Corynebacterium resistens DSM 45100 is equipped with a histidine utilization (hut) gene cluster encoding a four-step pathway for the catabolism of l-histidine and a transcriptional regulator of the IclR superfamily, now named HutR. The utilization of l-histidine might be relevant for the growth of C.resistens in its natural habitat, probably the histidine-rich inguinal and perineal areas of the human body. The ability of C.resistens to utilize l-histidine as a sole source of nitrogen was demonstrated by growth assays in synthetic minimal media. Reverse transcriptase PCRs revealed enhanced transcript levels of the hut genes in C.resistens cells grown in the presence of l-histidine. Promoter-probe assays showed that the hut genes are organized in three transcription units: hutHUI, hutR, and hutG. The respective transcriptional start sites were mapped by 5' RACE-PCR to detected putative promoter regions. DNA band shift assays with purified HutR protein identified the 14-bp DNA sequence TCTGwwATwCCAGA located upstream of the mapped promoters. This DNA motif includes a 4-bp terminal palindrome, which turned out to be essential for HutR binding in vitro. These data add a new physiological function to the large IclR family of transcriptional regulators. 2012 Federation of European Microbiological Societies. Published by Blackwell Publishing Ltd. All rights reserved.
Erscheinungsjahr
2012
Zeitschriftentitel
FEMS Microbiology Letters
Band
331
Ausgabe
2
Seite(n)
136-143
ISSN
0378-1097
Page URI
https://pub.uni-bielefeld.de/record/2500812
Zitieren
Schröder J, Maus I, Ostermann AL, Kogler AC, Tauch A. Binding of the IclR-type regulator HutR in the histidine utilization (hut) gene cluster of the human pathogen Corynebacterium resistens DSM 45100. FEMS Microbiology Letters. 2012;331(2):136-143.
Schröder, J., Maus, I., Ostermann, A. L., Kogler, A. C., & Tauch, A. (2012). Binding of the IclR-type regulator HutR in the histidine utilization (hut) gene cluster of the human pathogen Corynebacterium resistens DSM 45100. FEMS Microbiology Letters, 331(2), 136-143. doi:10.1111/j.1574-6968.2012.02564.x
Schröder, Jasmin, Maus, Irena, Ostermann, Anna Lena, Kogler, Anna Christina, and Tauch, Andreas. 2012. “Binding of the IclR-type regulator HutR in the histidine utilization (hut) gene cluster of the human pathogen Corynebacterium resistens DSM 45100”. FEMS Microbiology Letters 331 (2): 136-143.
Schröder, J., Maus, I., Ostermann, A. L., Kogler, A. C., and Tauch, A. (2012). Binding of the IclR-type regulator HutR in the histidine utilization (hut) gene cluster of the human pathogen Corynebacterium resistens DSM 45100. FEMS Microbiology Letters 331, 136-143.
Schröder, J., et al., 2012. Binding of the IclR-type regulator HutR in the histidine utilization (hut) gene cluster of the human pathogen Corynebacterium resistens DSM 45100. FEMS Microbiology Letters, 331(2), p 136-143.
J. Schröder, et al., “Binding of the IclR-type regulator HutR in the histidine utilization (hut) gene cluster of the human pathogen Corynebacterium resistens DSM 45100”, FEMS Microbiology Letters, vol. 331, 2012, pp. 136-143.
Schröder, J., Maus, I., Ostermann, A.L., Kogler, A.C., Tauch, A.: Binding of the IclR-type regulator HutR in the histidine utilization (hut) gene cluster of the human pathogen Corynebacterium resistens DSM 45100. FEMS Microbiology Letters. 331, 136-143 (2012).
Schröder, Jasmin, Maus, Irena, Ostermann, Anna Lena, Kogler, Anna Christina, and Tauch, Andreas. “Binding of the IclR-type regulator HutR in the histidine utilization (hut) gene cluster of the human pathogen Corynebacterium resistens DSM 45100”. FEMS Microbiology Letters 331.2 (2012): 136-143.
Daten bereitgestellt von European Bioinformatics Institute (EBI)
2 Zitationen in Europe PMC
Daten bereitgestellt von Europe PubMed Central.
Identification of new genes contributing to the extreme radioresistance of Deinococcus radiodurans using a Tn5-based transposon mutant library.
Dulermo R, Onodera T, Coste G, Passot F, Dutertre M, Porteron M, Confalonieri F, Sommer S, Pasternak C., PLoS One 10(4), 2015
PMID: 25884619
Dulermo R, Onodera T, Coste G, Passot F, Dutertre M, Porteron M, Confalonieri F, Sommer S, Pasternak C., PLoS One 10(4), 2015
PMID: 25884619
Urocanate as a potential signaling molecule for bacterial recognition of eukaryotic hosts.
Zhang XX, Ritchie SR, Rainey PB., Cell Mol Life Sci 71(4), 2014
PMID: 24305948
Zhang XX, Ritchie SR, Rainey PB., Cell Mol Life Sci 71(4), 2014
PMID: 24305948
24 References
Daten bereitgestellt von Europe PubMed Central.
The IclR-type transcriptional repressor LtbR regulates the expression of leucine and tryptophan biosynthesis genes in the amino acid producer Corynebacterium glutamicum.
Brune I, Jochmann N, Brinkrolf K, Huser AT, Gerstmeir R, Eikmanns BJ, Kalinowski J, Puhler A, Tauch A., J. Bacteriol. 189(7), 2007
PMID: 17259312
Brune I, Jochmann N, Brinkrolf K, Huser AT, Gerstmeir R, Eikmanns BJ, Kalinowski J, Puhler A, Tauch A., J. Bacteriol. 189(7), 2007
PMID: 17259312
Induction and repression of the histidine-degrading enzymes of Bacillus subtilis.
Chasin LA, Magasanik B., J. Biol. Chem. 243(19), 1968
PMID: 4971350
Chasin LA, Magasanik B., J. Biol. Chem. 243(19), 1968
PMID: 4971350
The degradation of L-histidine, imidazolyl-L-lactate and imidazolylpropionate by Pseudomonas testosteroni.
Coote JG, Hassall H., Biochem. J. 132(3), 1973
PMID: 4146796
Coote JG, Hassall H., Biochem. J. 132(3), 1973
PMID: 4146796
Histidine in human vaginal fluid.
Dusitsin N, Gregoire AT, Johnson WD, Rakoff AE., Obstet Gynecol 29(1), 1967
PMID: 4289424
Dusitsin N, Gregoire AT, Johnson WD, Rakoff AE., Obstet Gynecol 29(1), 1967
PMID: 4289424
Differential plasmid rescue from transgenic mouse DNAs into Escherichia coli methylation-restriction mutants.
Grant SG, Jessee J, Bloom FR, Hanahan D., Proc. Natl. Acad. Sci. U.S.A. 87(12), 1990
PMID: 2162051
Grant SG, Jessee J, Bloom FR, Hanahan D., Proc. Natl. Acad. Sci. U.S.A. 87(12), 1990
PMID: 2162051
Identification of multiple repressor recognition sites in the hut system of Pseudomonas putida.
Hu L, Allison SL, Phillips AT., J. Bacteriol. 171(8), 1989
PMID: 2666390
Hu L, Allison SL, Phillips AT., J. Bacteriol. 171(8), 1989
PMID: 2666390
Isolation of a negative control mutant of the nitrogen assimilation control protein, NAC, in Klebsiella aerogenes.
Janes BK, Rosario CJ, Bender RA., J. Bacteriol. 185(2), 2003
PMID: 12511519
Janes BK, Rosario CJ, Bender RA., J. Bacteriol. 185(2), 2003
PMID: 12511519
Genetic makeup of the Corynebacterium glutamicum LexA regulon deduced from comparative transcriptomics and in vitro DNA band shift assays.
Jochmann N, Kurze AK, Czaja LF, Brinkrolf K, Brune I, Huser AT, Hansmeier N, Puhler A, Borovok I, Tauch A., Microbiology (Reading, Engl.) 155(Pt 5), 2009
PMID: 19372162
Jochmann N, Kurze AK, Czaja LF, Brinkrolf K, Brune I, Huser AT, Hansmeier N, Puhler A, Borovok I, Tauch A., Microbiology (Reading, Engl.) 155(Pt 5), 2009
PMID: 19372162
Plasmid vectors for testing in vivo promoter activities in Corynebacterium glutamicum and Rhodococcus erythropolis.
Knoppova M, Phensaijai M, Vesely M, Zemanova M, Nesvera J, Patek M., Curr. Microbiol. 55(3), 2007
PMID: 17657537
Knoppova M, Phensaijai M, Vesely M, Zemanova M, Nesvera J, Patek M., Curr. Microbiol. 55(3), 2007
PMID: 17657537
The GlxR regulon of the amino acid producer Corynebacterium glutamicum: Detection of the corynebacterial core regulon and integration into the transcriptional regulatory network model.
Kohl TA, Tauch A., J. Biotechnol. 143(4), 2009
PMID: 19665500
Kohl TA, Tauch A., J. Biotechnol. 143(4), 2009
PMID: 19665500
Functional determinants of transcription factors in Escherichia coli: protein families and binding sites.
Madan Babu M, Teichmann SA., Trends Genet. 19(2), 2003
PMID: 12547514
Madan Babu M, Teichmann SA., Trends Genet. 19(2), 2003
PMID: 12547514
Magasanik, 1978
Induction and repression of the histidine-degrading enzymes in Aerobacter aerogenes.
Magasanik B, Lund P, Neidhardt FC, Schwartz DT., J. Biol. Chem. 240(11), 1965
PMID: 5845834
Magasanik B, Lund P, Neidhardt FC, Schwartz DT., J. Biol. Chem. 240(11), 1965
PMID: 5845834
Members of the IclR family of bacterial transcriptional regulators function as activators and/or repressors.
Molina-Henares AJ, Krell T, Eugenia Guazzaroni M, Segura A, Ramos JL., FEMS Microbiol. Rev. 30(2), 2006
PMID: 16472303
Molina-Henares AJ, Krell T, Eugenia Guazzaroni M, Segura A, Ramos JL., FEMS Microbiol. Rev. 30(2), 2006
PMID: 16472303
Regulation of hutUH operon expression by the catabolite gene activator protein-cyclic AMP complex in Klebsiella aerogenes.
Nieuwkoop AJ, Boylan SA, Bender RA., J. Bacteriol. 159(3), 1984
PMID: 6090399
Nieuwkoop AJ, Boylan SA, Bender RA., J. Bacteriol. 159(3), 1984
PMID: 6090399
Corynebacterium resistens sp. nov., a new multidrug-resistant coryneform bacterium isolated from human infections.
Otsuka Y, Kawamura Y, Koyama T, Iihara H, Ohkusu K, Ezaki T., J. Clin. Microbiol. 43(8), 2005
PMID: 16081900
Otsuka Y, Kawamura Y, Koyama T, Iihara H, Ohkusu K, Ezaki T., J. Clin. Microbiol. 43(8), 2005
PMID: 16081900
Promoters of Corynebacterium glutamicum.
Patek M, Nesvera J, Guyonvarch A, Reyes O, Leblon G., J. Biotechnol. 104(1-3), 2003
PMID: 12948648
Patek M, Nesvera J, Guyonvarch A, Reyes O, Leblon G., J. Biotechnol. 104(1-3), 2003
PMID: 12948648
Sambrook, 1989
Transcriptional regulation of gene expression in Corynebacterium glutamicum: the role of global, master and local regulators in the modular and hierarchical gene regulatory network.
Schroder J, Tauch A., FEMS Microbiol. Rev. 34(5), 2010
PMID: 20491930
Schroder J, Tauch A., FEMS Microbiol. Rev. 34(5), 2010
PMID: 20491930
The Zur regulon of Corynebacterium glutamicum ATCC 13032.
Schroder J, Jochmann N, Rodionov DA, Tauch A., BMC Genomics 11(), 2010
PMID: 20055984
Schroder J, Jochmann N, Rodionov DA, Tauch A., BMC Genomics 11(), 2010
PMID: 20055984
Complete genome sequence, lifestyle, and multi-drug resistance of the human pathogen Corynebacterium resistens DSM 45100 isolated from blood samples of a leukemia patient.
Schroder J, Maus I, Meyer K, Wordemann S, Blom J, Jaenicke S, Schneider J, Trost E, Tauch A., BMC Genomics 13(), 2012
PMID: 22524407
Schroder J, Maus I, Meyer K, Wordemann S, Blom J, Jaenicke S, Schneider J, Trost E, Tauch A., BMC Genomics 13(), 2012
PMID: 22524407
Metabolic control of virulence genes in Brucella abortus: HutC coordinates virB expression and the histidine utilization pathway by direct binding to both promoters.
Sieira R, Arocena GM, Bukata L, Comerci DJ, Ugalde RA., J. Bacteriol. 192(1), 2010
PMID: 19854911
Sieira R, Arocena GM, Bukata L, Comerci DJ, Ugalde RA., J. Bacteriol. 192(1), 2010
PMID: 19854911
Relaxed rrn expression and amino acid requirement of a Corynebacterium glutamicum rel mutant defective in (p)ppGpp metabolism.
Tauch A, Wehmeier L, Gotker S, Puhler A, Kalinowski J., FEMS Microbiol. Lett. 201(1), 2001
PMID: 11445167
Tauch A, Wehmeier L, Gotker S, Puhler A, Kalinowski J., FEMS Microbiol. Lett. 201(1), 2001
PMID: 11445167
Genetic analysis of the histidine utilization (hut) genes in Pseudomonas fluorescens SBW25.
Zhang XX, Rainey PB., Genetics 176(4), 2007
PMID: 17717196
Zhang XX, Rainey PB., Genetics 176(4), 2007
PMID: 17717196
Export
Markieren/ Markierung löschen
Markierte Publikationen
Web of Science
Dieser Datensatz im Web of Science®Quellen
PMID: 22462578
PubMed | Europe PMC
Suchen in