Circadian clock-regulated expression of an RNA-binding protein in Arabidopsis: characterisation of a minimal promoter element

Staiger D, Apel K (1999)
Molecular and General Genetics MGG 261(4-5): 811-819.

Zeitschriftenaufsatz | Veröffentlicht | Englisch
 
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Abstract / Bemerkung
The Atgrp7 transcript encodes a clock-regulated, glycine-rich, RNA-binding protein in Arabidopsis thaliana and shows a circadian variation in steady-state abundance. Constitutive overexpression of its product, At GRP7, in transgenic Arabidopsis plants depresses the oscillations of the endogenous Atgrp7 transcript, indicating that both the transcript and the protein are part of a clock-regulated negative feedback circuit. Here we characterise the upstream region of the Atgrp7 gene in order to begin to dissect the molecular basis of this oscillating autoregulatory feedback loop. Fusion of a 1.5-kb promoter fragment to the β-glucuronidase ( gus ) reporter gene leads to circadian oscillations in the level of the gus transcript in transgenic Arabidopsis plants, with highest levels in the evening, indicating that transcription of the Atgrp7 gene is rhythmically activated by the endogenous circadian clock. A 265-bp fragment upstream of the transcription start site is necessary for high-amplitude Atgrp7 cycling. Within this region, a 56-bp clock-responsive element that confers a low-amplitude circadian oscillation (approximately threefold) with peak abundance in the early evening maps between positions −112 and −57. Another element necessary for augmenting the amplitude of the oscillation lies between −178 and −264. Genetic crosses between a line bearing a promoter- gus fusion and plants that overexpress At GRP7 show that the promoter by itself does not mediate the negative feedback of At GRP7 on the oscillations of its own transcript.
Stichworte
tRNA(Leu) gene; clock response element; protein; glycine-rich RNA binding; circadian rhythm; Arabidopsis thaliana
Erscheinungsjahr
1999
Zeitschriftentitel
Molecular and General Genetics MGG
Band
261
Ausgabe
4-5
Seite(n)
811-819
ISSN
0026-8925
eISSN
1432-1874
Page URI
https://pub.uni-bielefeld.de/record/2439109

Zitieren

Staiger D, Apel K. Circadian clock-regulated expression of an RNA-binding protein in Arabidopsis: characterisation of a minimal promoter element. Molecular and General Genetics MGG. 1999;261(4-5):811-819.
Staiger, D., & Apel, K. (1999). Circadian clock-regulated expression of an RNA-binding protein in Arabidopsis: characterisation of a minimal promoter element. Molecular and General Genetics MGG, 261(4-5), 811-819. https://doi.org/10.1007/s004380050025
Staiger, Dorothee, and Apel, Klaus. 1999. “Circadian clock-regulated expression of an RNA-binding protein in Arabidopsis: characterisation of a minimal promoter element”. Molecular and General Genetics MGG 261 (4-5): 811-819.
Staiger, D., and Apel, K. (1999). Circadian clock-regulated expression of an RNA-binding protein in Arabidopsis: characterisation of a minimal promoter element. Molecular and General Genetics MGG 261, 811-819.
Staiger, D., & Apel, K., 1999. Circadian clock-regulated expression of an RNA-binding protein in Arabidopsis: characterisation of a minimal promoter element. Molecular and General Genetics MGG, 261(4-5), p 811-819.
D. Staiger and K. Apel, “Circadian clock-regulated expression of an RNA-binding protein in Arabidopsis: characterisation of a minimal promoter element”, Molecular and General Genetics MGG, vol. 261, 1999, pp. 811-819.
Staiger, D., Apel, K.: Circadian clock-regulated expression of an RNA-binding protein in Arabidopsis: characterisation of a minimal promoter element. Molecular and General Genetics MGG. 261, 811-819 (1999).
Staiger, Dorothee, and Apel, Klaus. “Circadian clock-regulated expression of an RNA-binding protein in Arabidopsis: characterisation of a minimal promoter element”. Molecular and General Genetics MGG 261.4-5 (1999): 811-819.

33 Zitationen in Europe PMC

Daten bereitgestellt von Europe PubMed Central.

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Salicylic acid-dependent and -independent impact of an RNA-binding protein on plant immunity.
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Regulation of pri-miRNA processing by the hnRNP-like protein AtGRP7 in Arabidopsis.
Köster T, Meyer K, Weinholdt C, Smith LM, Lummer M, Speth C, Grosse I, Weigel D, Staiger D., Nucleic Acids Res 42(15), 2014
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An hnRNP-like RNA-binding protein affects alternative splicing by in vivo interaction with transcripts in Arabidopsis thaliana.
Streitner C, Köster T, Simpson CG, Shaw P, Danisman S, Brown JW, Staiger D., Nucleic Acids Res 40(22), 2012
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Staiger D, Köster T., Cell Mol Life Sci 68(1), 2011
PMID: 20803230
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PMID: 21453442
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PMID: 18410480
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PMID: 17924945
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