Circadian clock-regulated expression of an RNA-binding protein in Arabidopsis: characterisation of a minimal promoter element

Staiger D, Apel K (1999)
Molecular and General Genetics MGG 261(4-5): 811-819.

Zeitschriftenaufsatz | Veröffentlicht | Englisch
 
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Abstract / Bemerkung
The Atgrp7 transcript encodes a clock-regulated, glycine-rich, RNA-binding protein in Arabidopsis thaliana and shows a circadian variation in steady-state abundance. Constitutive overexpression of its product, At GRP7, in transgenic Arabidopsis plants depresses the oscillations of the endogenous Atgrp7 transcript, indicating that both the transcript and the protein are part of a clock-regulated negative feedback circuit. Here we characterise the upstream region of the Atgrp7 gene in order to begin to dissect the molecular basis of this oscillating autoregulatory feedback loop. Fusion of a 1.5-kb promoter fragment to the β-glucuronidase ( gus ) reporter gene leads to circadian oscillations in the level of the gus transcript in transgenic Arabidopsis plants, with highest levels in the evening, indicating that transcription of the Atgrp7 gene is rhythmically activated by the endogenous circadian clock. A 265-bp fragment upstream of the transcription start site is necessary for high-amplitude Atgrp7 cycling. Within this region, a 56-bp clock-responsive element that confers a low-amplitude circadian oscillation (approximately threefold) with peak abundance in the early evening maps between positions −112 and −57. Another element necessary for augmenting the amplitude of the oscillation lies between −178 and −264. Genetic crosses between a line bearing a promoter- gus fusion and plants that overexpress At GRP7 show that the promoter by itself does not mediate the negative feedback of At GRP7 on the oscillations of its own transcript.
Stichworte
tRNA(Leu) gene; clock response element; protein; glycine-rich RNA binding; circadian rhythm; Arabidopsis thaliana
Erscheinungsjahr
1999
Zeitschriftentitel
Molecular and General Genetics MGG
Band
261
Ausgabe
4-5
Seite(n)
811-819
ISSN
0026-8925
eISSN
1432-1874
Page URI
https://pub.uni-bielefeld.de/record/2439109

Zitieren

Staiger D, Apel K. Circadian clock-regulated expression of an RNA-binding protein in Arabidopsis: characterisation of a minimal promoter element. Molecular and General Genetics MGG. 1999;261(4-5):811-819.
Staiger, D., & Apel, K. (1999). Circadian clock-regulated expression of an RNA-binding protein in Arabidopsis: characterisation of a minimal promoter element. Molecular and General Genetics MGG, 261(4-5), 811-819. https://doi.org/10.1007/s004380050025
Staiger, Dorothee, and Apel, Klaus. 1999. “Circadian clock-regulated expression of an RNA-binding protein in Arabidopsis: characterisation of a minimal promoter element”. Molecular and General Genetics MGG 261 (4-5): 811-819.
Staiger, D., and Apel, K. (1999). Circadian clock-regulated expression of an RNA-binding protein in Arabidopsis: characterisation of a minimal promoter element. Molecular and General Genetics MGG 261, 811-819.
Staiger, D., & Apel, K., 1999. Circadian clock-regulated expression of an RNA-binding protein in Arabidopsis: characterisation of a minimal promoter element. Molecular and General Genetics MGG, 261(4-5), p 811-819.
D. Staiger and K. Apel, “Circadian clock-regulated expression of an RNA-binding protein in Arabidopsis: characterisation of a minimal promoter element”, Molecular and General Genetics MGG, vol. 261, 1999, pp. 811-819.
Staiger, D., Apel, K.: Circadian clock-regulated expression of an RNA-binding protein in Arabidopsis: characterisation of a minimal promoter element. Molecular and General Genetics MGG. 261, 811-819 (1999).
Staiger, Dorothee, and Apel, Klaus. “Circadian clock-regulated expression of an RNA-binding protein in Arabidopsis: characterisation of a minimal promoter element”. Molecular and General Genetics MGG 261.4-5 (1999): 811-819.

33 Zitationen in Europe PMC

Daten bereitgestellt von Europe PubMed Central.

Adaptation of iCLIP to plants determines the binding landscape of the clock-regulated RNA-binding protein AtGRP7.
Meyer K, Köster T, Nolte C, Weinholdt C, Lewinski M, Grosse I, Staiger D., Genome Biol 18(1), 2017
PMID: 29084609
Salicylic acid-dependent and -independent impact of an RNA-binding protein on plant immunity.
Hackmann C, Korneli C, Kutyniok M, Köster T, Wiedenlübbert M, Müller C, Staiger D., Plant Cell Environ 37(3), 2014
PMID: 23961939
Regulation of pri-miRNA processing by the hnRNP-like protein AtGRP7 in Arabidopsis.
Köster T, Meyer K, Weinholdt C, Smith LM, Lummer M, Speth C, Grosse I, Weigel D, Staiger D., Nucleic Acids Res 42(15), 2014
PMID: 25104024
An hnRNP-like RNA-binding protein affects alternative splicing by in vivo interaction with transcripts in Arabidopsis thaliana.
Streitner C, Köster T, Simpson CG, Shaw P, Danisman S, Brown JW, Staiger D., Nucleic Acids Res 40(22), 2012
PMID: 23042250
Spotlight on post-transcriptional control in the circadian system.
Staiger D, Köster T., Cell Mol Life Sci 68(1), 2011
PMID: 20803230
Reversible photoswitchable DRONPA-s monitors nucleocytoplasmic transport of an RNA-binding protein in transgenic plants.
Lummer M, Humpert F, Steuwe C, Caesar K, Schüttpelz M, Sauer M, Staiger D., Traffic 12(6), 2011
PMID: 21453442
Global transcript profiling of transgenic plants constitutively overexpressing the RNA-binding protein AtGRP7.
Streitner C, Hennig L, Korneli C, Staiger D., BMC Plant Biol 10(), 2010
PMID: 20946635
Glycine-rich RNA-binding protein 7 affects abiotic stress responses by regulating stomata opening and closing in Arabidopsis thaliana.
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PMID: 18410480
Auto-regulation of the circadian slave oscillator component AtGRP7 and regulation of its targets is impaired by a single RNA recognition motif point mutation.
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PMID: 17924945
AtGRP7 is involved in the regulation of abscisic acid and stress responses in Arabidopsis.
Cao S, Jiang L, Song S, Jing R, Xu G., Cell Mol Biol Lett 11(4), 2006
PMID: 17001447
The wheat TaGI1, involved in photoperiodic flowering, encodes an Arabidopsis GI ortholog.
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PMID: 16028116
Proteomic identification of putative plasmodesmatal proteins from Chara corallina.
Faulkner CR, Blackman LM, Cordwell SJ, Overall RL., Proteomics 5(11), 2005
PMID: 16075417
Arabidopsis transportin1 is the nuclear import receptor for the circadian clock-regulated RNA-binding protein AtGRP7.
Ziemienowicz A, Haasen D, Staiger D, Merkle T., Plant Mol Biol 53(1-2), 2003
PMID: 14756317
The Arabidopsis circadian system.
McClung CR, Salomé PA, Michael TP., Arabidopsis Book 1(), 2002
PMID: 22303209
Floral responses to photoperiod are correlated with the timing of rhythmic expression relative to dawn and dusk in Arabidopsis.
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PMID: 12271123
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PMID: 11687489
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McClung CR., Annu Rev Plant Physiol Plant Mol Biol 52(), 2001
PMID: 11337395
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PMID: 11597501
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McWatters HG, Roden LC, Staiger D., Philos Trans R Soc Lond B Biol Sci 356(1415), 2001
PMID: 11710980
RNA-binding proteins and circadian rhythms in Arabidopsis thaliana.
Staiger D., Philos Trans R Soc Lond B Biol Sci 356(1415), 2001
PMID: 11710982
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Lakin-Thomas PL., Trends Genet 16(3), 2000
PMID: 10689355

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Daten bereitgestellt von Europe PubMed Central.

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