Mitochondrial DNA barcoding detects some species that are real, and some that are not

Dasmahapatra KK, Elias M, Hill RI, Hoffman J, Mallet J (2010)
Molecular Ecology Resources 10(2): 264-273.

Zeitschriftenaufsatz | Veröffentlicht | Englisch
 
Download
Es wurden keine Dateien hochgeladen. Nur Publikationsnachweis!
DOI
Autor*in
Dasmahapatra, K.K.; Elias, M.; Hill, R.I.; Hoffman, JosephUniBi ; Mallet, J.
Einrichtung
Fakultät für Biologie
Erscheinungsjahr
2010
Zeitschriftentitel
Molecular Ecology Resources
Band
10
Ausgabe
2
Seite(n)
264-273
ISSN
1755-098X
eISSN
1755-0998
Page URI
https://pub.uni-bielefeld.de/record/2399123

Zitieren

Dasmahapatra KK, Elias M, Hill RI, Hoffman J, Mallet J. Mitochondrial DNA barcoding detects some species that are real, and some that are not. Molecular Ecology Resources. 2010;10(2):264-273.
Dasmahapatra, K. K., Elias, M., Hill, R. I., Hoffman, J., & Mallet, J. (2010). Mitochondrial DNA barcoding detects some species that are real, and some that are not. Molecular Ecology Resources, 10(2), 264-273. https://doi.org/10.1111/j.1755-0998.2009.02763.x
Dasmahapatra, K.K., Elias, M., Hill, R.I., Hoffman, Joseph, and Mallet, J. 2010. “Mitochondrial DNA barcoding detects some species that are real, and some that are not”. Molecular Ecology Resources 10 (2): 264-273.
Dasmahapatra, K. K., Elias, M., Hill, R. I., Hoffman, J., and Mallet, J. (2010). Mitochondrial DNA barcoding detects some species that are real, and some that are not. Molecular Ecology Resources 10, 264-273.
Dasmahapatra, K.K., et al., 2010. Mitochondrial DNA barcoding detects some species that are real, and some that are not. Molecular Ecology Resources, 10(2), p 264-273.
K.K. Dasmahapatra, et al., “Mitochondrial DNA barcoding detects some species that are real, and some that are not”, Molecular Ecology Resources, vol. 10, 2010, pp. 264-273.
Dasmahapatra, K.K., Elias, M., Hill, R.I., Hoffman, J., Mallet, J.: Mitochondrial DNA barcoding detects some species that are real, and some that are not. Molecular Ecology Resources. 10, 264-273 (2010).
Dasmahapatra, K.K., Elias, M., Hill, R.I., Hoffman, Joseph, and Mallet, J. “Mitochondrial DNA barcoding detects some species that are real, and some that are not”. Molecular Ecology Resources 10.2 (2010): 264-273.

38 Zitationen in Europe PMC

Daten bereitgestellt von Europe PubMed Central.

Genetic Diversity of Bemisia tabaci (Hemiptera: Aleyrodidae) Species Complex Across Malaysia.
Shadmany M, Boykin LM, Muhamad R, Omar D., J Econ Entomol 112(1), 2019
PMID: 30272175
DNA barcoding a nightmare taxon: assessing barcode index numbers and barcode gaps for sweat bees.
Gibbs J., Genome 61(1), 2018
PMID: 28972864
Deep intraspecific DNA barcode splits and hybridisation in the Udea alpinalis group (Insecta, Lepidoptera, Crambidae) - an integrative revision.
Mally R, Huemer P, Nuss M., Zookeys (746), 2018
PMID: 29674896
A two-step DNA barcoding approach for delimiting moth species: moths of Dongling Mountain (Beijing, China) as a case study.
Jin Q, Hu XM, Han HL, Chen F, Cai WJ, Ruan QQ, Liu B, Luo GJ, Wang H, Liu X, Ward RD, Wu CS, Wilson JJ, Zhang AB., Sci Rep 8(1), 2018
PMID: 30250036
DNA barcoding for squids of the family Gonatidae (Cephalopoda: Teuthida) from the boreal North Pacific.
Katugin ON, Chichvarkhina OV, Zolotova AO, Chichvarkhin AY., Mitochondrial DNA A DNA Mapp Seq Anal 28(1), 2017
PMID: 26681137
Barcoding gap, but no support for cryptic speciation in the earthworm Aporrectodea longa (Clitellata: Lumbricidae).
Martinsson S, Rhodén C, Erséus C., Mitochondrial DNA A DNA Mapp Seq Anal 28(2), 2017
PMID: 26709635
Cryptic speciation and limited hybridization within Lumbricus earthworms (Clitellata: Lumbricidae).
Martinsson S, Erséus C., Mol Phylogenet Evol 106(), 2017
PMID: 27639480
DNA Barcoding of an Assembly of Montane Andean Butterflies (Satyrinae): Geographical Scale and Identification Performance.
Marín MA, Cadavid IC, Valdés L, Álvarez CF, Uribe SI, Vila R, Pyrcz TW., Neotrop Entomol 46(5), 2017
PMID: 28116647
Discordant population histories of host and its parasite: A role for ecological permeability of extreme environment?
Jirsová D, Štefka J, Jirků M., PLoS One 12(4), 2017
PMID: 28394904
New specific primers for amplification of the Internal Transcribed Spacer region in Clitellata (Annelida).
Liu Y, Erséus C., Ecol Evol 7(23), 2017
PMID: 29238565
Divergent clades or cryptic species? Mito-nuclear discordance in a Daphnia species complex.
Thielsch A, Knell A, Mohammadyari A, Petrusek A, Schwenk K., BMC Evol Biol 17(1), 2017
PMID: 29166859
DNA barcoding to fishes: current status and future directions.
Bhattacharya M, Sharma AR, Patra BC, Sharma G, Seo EM, Nam JS, Chakraborty C, Lee SS., Mitochondrial DNA A DNA Mapp Seq Anal 27(4), 2016
PMID: 26057011
Services of DNA barcoding in different fields.
Muhammad Tahir H, Akhtar S., Mitochondrial DNA A DNA Mapp Seq Anal 27(6), 2016
PMID: 26470942
Combined hybridization and mitochondrial capture shape complex phylogeographic patterns in hybridogenetic Cataglyphis desert ants.
Eyer PA, Leniaud L, Tinaut A, Aron S., Mol Phylogenet Evol 105(), 2016
PMID: 27591172
Congruence of microsatellite and mitochondrial DNA variation in acrobat ants (Crematogaster subgenus Decacrema, Formicidae: Myrmicinae) inhabiting Macaranga (Euphorbiaceae) myrmecophytes.
Ueda S, Nagano Y, Kataoka Y, Komatsu T, Itioka T, Shimizu-Kaya U, Inui Y, Itino T., PLoS One 10(2), 2015
PMID: 25692953
Molecular Systematics of the Chrysobothris femorata Species Group (Coleoptera: Buprestidae)
Hansen JA, Moulton JK, Klingeman WE, Oliver JB, Windham MT, Trigiano RN, Reding ME., Ann Entomol Soc Am 108(5), 2015
PMID: IND604664230
A simulation study of sample size for DNA barcoding.
Luo A, Lan H, Ling C, Zhang A, Shi L, Ho SY, Zhu C., Ecol Evol 5(24), 2015
PMID: 26811761
Conflicting patterns of DNA barcoding and taxonomy in the cicada genus Tettigettalna from Southern Europe (Hemiptera: Cicadidae).
Nunes VL, Mendes R, Marabuto E, Novais BM, Hertach T, Quartau JA, Seabra SG, Paulo OS, Simões PC., Mol Ecol Resour 14(1), 2014
PMID: 24034529
Multilocus phylogeography of the Patagonian lizard complex Liolaemus kriegi (Iguania: Liolaemini)
Medina CD, Avila LJ, Sites JW, Morando M., Biol J Linn Soc Lond 113(1), 2014
PMID: IND600811854
Multilocus phylogeny reconstruction: new insights into the evolutionary history of the genus Petunia.
Reck-Kortmann M, Silva-Arias GA, Segatto AL, Mäder G, Bonatto SL, de Freitas LB., Mol Phylogenet Evol 81(), 2014
PMID: 25196589
The seven deadly sins of DNA barcoding.
Collins RA, Cruickshank RH., Mol Ecol Resour 13(6), 2013
PMID: 23280099
Cryptic genetic and wing pattern diversity in a mimetic Heliconius butterfly.
Hill RI, Gilbert LE, Kronforst MR., Mol Ecol 22(10), 2013
PMID: 23530654
Molecular systematics of the butterfly tribe Preponini (Nymphalidae: Charaxinae)
ORTIZ‐ACEVEDO E, WILLMOTT KR., Syst Entomol 38(2), 2013
PMID: IND500646009
Cryptic species of Archinome (Annelida: Amphinomida) from vents and seeps.
Borda E, Kudenov JD, Chevaldonné P, Blake JA, Desbruyères D, Fabri MC, Hourdez S, Pleijel F, Shank TM, Wilson NG, Schulze A, Rouse GW., Proc Biol Sci 280(1770), 2013
PMID: 24026823
A retrospective approach to testing the DNA barcoding method.
Chapple DG, Ritchie PA., PLoS One 8(11), 2013
PMID: 24244283
DNA barcoding and species boundary delimitation of selected species of Chinese Acridoidea (Orthoptera: Caelifera).
Huang J, Zhang A, Mao S, Huang Y., PLoS One 8(12), 2013
PMID: 24376533
Half of the European fruit fly species barcoded (Diptera, Tephritidae); a feasibility test for molecular identification.
Smit J, Reijnen B, Stokvis F., Zookeys (365), 2013
PMID: 24453563
Species delimitation and global biosecurity.
Boykin LM, Armstrong KF, Kubatko L, De Barro P., Evol Bioinform Online 8(), 2012
PMID: 22267902
Barcoding and border biosecurity: identifying cyprinid fishes in the aquarium trade.
Collins RA, Armstrong KF, Meier R, Yi Y, Brown SD, Cruickshank RH, Keeling S, Johnston C., PLoS One 7(1), 2012
PMID: 22276096
DNA barcoding and genetic diversity of phyllostomid bats from the Yucatan Peninsula with comparisons to Central America.
Hernández-Dávila A, Vargas JA, Martínez-Méndez N, Lim BK, Engstrom MD, Ortega J., Mol Ecol Resour 12(4), 2012
PMID: 22372841
Integrative taxonomy for continental-scale terrestrial insect observations.
Gibson CM, Kao RH, Blevins KK, Travers PD., PLoS One 7(5), 2012
PMID: 22666362
Ecologically relevant cryptic species in the highly polymorphic Amazonian butterfly Mechanitis mazaeus s.l. (Lepidoptera: Nymphalidae; Ithomiini)
HILL RI, ELIAS M, DASMAHAPATRA KK, JIGGINS CD, KOONG V, WILLMOTT KR, MALLET J., Biol J Linn Soc Lond 106(3), 2012
PMID: IND44768772
Taxonomy of Mechanitis (f.) (Lepidoptera: Nymphalidae) from the west Colombian Andes: an integrative approach.
Giraldo CE, Uribe SI., Neotrop Entomol 41(6), 2012
PMID: 23949672
Complete DNA barcode reference library for a country's butterfly fauna reveals high performance for temperate Europe.
Dinca V, Zakharov EV, Hebert PD, Vila R., Proc Biol Sci 278(1704), 2011
PMID: 20702462
Use of DNA barcodes to identify invasive armyworm Spodoptera species in Florida.
Nagoshi RN, Brambila J, Meagher RL., J Insect Sci 11(), 2011
PMID: 22239735
Conserved PCR primer set designing for closely-related species to complete mitochondrial genome sequencing using a sliding window-based PSO algorithm.
Yang CH, Chang HW, Ho CH, Chou YC, Chuang LY., PLoS One 6(3), 2011
PMID: 21445268
The anatomy of a 'suture zone' in Amazonian butterflies: a coalescent-based test for vicariant geographic divergence and speciation.
Dasmahapatra KK, Lamas G, Simpson F, Mallet J., Mol Ecol 19(19), 2010
PMID: 20819158
Comparing the performance of multiple mitochondrial genes in the analysis of Australian freshwater fishes.
Page TJ, Hughes JM., J Fish Biol 77(9), 2010
PMID: 21133918

42 References

Daten bereitgestellt von Europe PubMed Central.

The utility of amplified fragment length polymorphisms in phylogenetics: a comparison of homology within and between genomes.
Althoff DM, Gitzendanner MA, Segraves KA., Syst. Biol. 56(3), 2007
PMID: 17562471
Gene-flow patterns in Atlantic and Mediterranean populations of the Lusitanian sea star Asterina gibbosa.
Baus E, Darrock DJ, Bruford MW., Mol. Ecol. 14(11), 2005
PMID: 16156809
How to track and assess genotyping errors in population genetics studies.
Bonin A, Bellemain E, Bronken Eidesen P, Pompanon F, Brochmann C, Taberlet P., Mol. Ecol. 13(11), 2004
PMID: 15487987
DNA barcoding in surveys of small mammal communities: a field study in Suriname.
Borisenko AV, Lim BK, Ivanova NV, Hanner RH, Hebert PD., Mol Ecol Resour 8(3), 2008
PMID: 21585824
Geographical patterns of evolution in Neotropical Lepidoptera: differentiation of the species of Melinaea and Mechanitis (Nymphalidae, Ithomiinae)
Brown, Systematic Entomology 2(), 1977

Brown, 1979
Chromosome evolution in Neotropical Danainae and Ithomiinae (Lepidoptera).
Brown KS Jr, Von Schoultz B, Suomalainen E., Hereditas 141(3), 2004
PMID: 15703038
DNA barcodes of closely related (but morphologically and ecologically distinct) species of skipper butterflies (Hesperiidae) can differ by only one to three nucleotides
Burns, Journal of the Lepidopterists’ Society 61(), 2007
In-stream and overland dispersal across a river network influences gene flow in a freshwater insect, Calopteryx splendens.
Chaput-Bardy A, Lemaire C, Picard D, Secondi J., Mol. Ecol. 17(15), 2008
PMID: 19160477
Taxonomy: DNA barcodes: recent successes and future prospects.
Dasmahapatra KK, Mallet J., Heredity (Edinb) 97(4), 2006
PMID: 16788705
The uniquely human capacity to throw evolved from a non-throwing primate: an evolutionary dissociation between action and perception.
Wood JN, Glynn DD, Hauser MD., Biol. Lett. 3(4), 2007
PMID: 17550878
Estimating levels of inbreeding using AFLP markers.
Dasmahapatra KK, Lacy RC, Amos W., Heredity (Edinb) 100(3), 2007
PMID: 17987055
Limited performance of DNA barcoding in a diverse community of tropical butterflies
Elias, Proceedings of the Royal Society of London, Series B: Biological Sciences 274(), 2007
DNA barcodes for Cladocera and Copepoda from Mexico and Guatemala, highlights and new discoveries
Elias-Gutierrez, Zootaxa 1839(), 2008
Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study.
Evanno G, Regnaut S, Goudet J., Mol. Ecol. 14(8), 2005
PMID: 15969739
Phase determination from direct sequencing of length-variable DNA regions
FLOT JF, TILLIER A, SAMADI S, TILLIER S., Mol. Ecol. Notes 6(3), 2006
PMID: IND43829179
DNA barcodes distinguish species of tropical Lepidoptera
Hajibabaei, Proceedings of the National Academy of Sciences, USA 103(), 2006
DNA barcoding: how it complements taxonomy, molecular phylogenetics and population genetics.
Hajibabaei M, Singer GA, Hebert PD, Hickey DA., Trends Genet. 23(4), 2007
PMID: 17316886
Biological identifications through DNA barcodes
Hebert, Proceedings of the Royal Society of London, Series B: Biological Sciences 270(), 2003
Identification of birds through DNA barcodes
Hebert, PLOS Biology 2(), 2004
DNA barcoding will often fail to discover new animal species over broad parameter space.
Hickerson MJ, Meyer CP, Moritz C., Syst. Biol. 55(5), 2006
PMID: 17060195
Problems with mitochondrial DNA as a marker in population, phylogeographic, and phylogenetic studies: the effects of inherited symbionts
Hurst, Proceedings of the Royal Society of London, Series B: Biological Sciences 272(), 2005

Lamas, 2004
Analysis of population genetic structure with RAPD markers.
Lynch M, Milligan BG., Mol. Ecol. 3(2), 1994
PMID: 8019690
Neighbouring male spotted bowerbirds are not related, but do maraud each other
Madden, Animal Behaviour 68(), 2004
Molecular systematics of the butterfly genus Ithomia (Lepidoptera: Ithomiinae): a composite phylogenetic hypothesis based on seven genes.
Mallarino R, Bermingham E, Willmott KR, Whinnett A, Jiggins CD., Mol. Phylogenet. Evol. 34(3), 2004
PMID: 15683934
DNA barcoding: error rates based on comprehensive sampling
Meyer, PLOS Biology 3(), 2005
DNA-based species delineation in tropical beetles using mitochondrial and nuclear markers
Monaghan, Philosophical Transactions of the Royal Society of London, Series B: Biological Sciences 360(), 2005
AFLP genotyping and fingerprinting
Mueller, Trends in Ecology and Evolution 14(), 1999
Inference of population structure using multilocus genotype data.
Pritchard JK, Stephens M, Donnelly P., Genetics 155(2), 2000
PMID: 10835412
DNA barcodes of fish of the Scotia Sea, Antarctica indicate priority groups for taxonomic and systematics focus
Rock, Antarctic Science 20(), 2008
DNA barcodes reveal cryptic host-specificity within the presumed polyphagous members of a genus of parasitoid flies (Diptera: Tachinidae)
Smith, Proceedings of the National Academy of Sciences, USA 103(), 2006
Barcode of life.
Stoeckle MY, Hebert PD., Sci. Am. 299(4), 2008
PMID: 18847089
Genetic diversity and structure of urban populations of Pieris butterflies assessed using amplified fragment length polymorphism.
Takami Y, Koshio C, Ishii M, Fujii H, Hidaka T, Shimizu I., Mol. Ecol. 13(2), 2004
PMID: 14717884
MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0.
Tamura K, Dudley J, Nei M, Kumar S., Mol. Biol. Evol. 24(8), 2007
PMID: 17488738

Vekemans, 2002
AFLP: a new technique for DNA fingerprinting.
Vos P, Hogers R, Bleeker M, Reijans M, van de Lee T, Hornes M, Frijters A, Pot J, Peleman J, Kuiper M., Nucleic Acids Res. 23(21), 1995
PMID: 7501463
Estimating F-statistics for the analysis of population structure
Weir, Evolution 38(), 1984
Phylogenetic utility of Tektin, a novel region for inferring systematic relationships among Lepidoptera.
Whinnett A, Brower AVZ, Lee MM, Willmott KR, Mallet J., Ann. Entomol. Soc. Am. 98(6), 2005
PMID: IND43764772
Strikingly variable divergence times inferred across an Amazonian butterfly ‘suture zone’
Whinnett, Proceedings of the Royal Society of London, Series B: Biological Sciences 272(), 2005
Does the DNA barcoding gap exist? - a case study in blue butterflies (Lepidoptera: Lycaenidae)
Wiemers, Frontiers in Zoology 4(), 2007
Myth of the molecule: DNA barcodes for species cannot replace morphology for identification and classification
Will, Cladistics 20(), 2004
Export

Markieren/ Markierung löschen
Markierte Publikationen

Open Data PUB

Web of Science

Dieser Datensatz im Web of Science®
Quellen

PMID: 21565021
PubMed | Europe PMC

Suchen in

Google Scholar