Geographic variation of the major histocompatibility complex in Eastern Atlantic grey seals (Halichoerus grypus).

Cammen K, Hoffman J, Knapp LA, Harwood J, Amos W (2011)
Molecular Ecology 20(4): 740-752.

Zeitschriftenaufsatz | Veröffentlicht | Englisch
 
Download
Es wurden keine Dateien hochgeladen. Nur Publikationsnachweis!
DOI
Autor*in
Cammen, K.; Hoffman, JosephUniBi ; Knapp, L. A.; Harwood, J.; Amos, W.
Einrichtung
Fakultät für Biologie > Verhaltensforschung
Erscheinungsjahr
2011
Zeitschriftentitel
Molecular Ecology
Band
20
Ausgabe
4
Seite(n)
740-752
ISSN
0962-1083
Page URI
https://pub.uni-bielefeld.de/record/2397636

Zitieren

Cammen K, Hoffman J, Knapp LA, Harwood J, Amos W. Geographic variation of the major histocompatibility complex in Eastern Atlantic grey seals (Halichoerus grypus). Molecular Ecology. 2011;20(4):740-752.
Cammen, K., Hoffman, J., Knapp, L. A., Harwood, J., & Amos, W. (2011). Geographic variation of the major histocompatibility complex in Eastern Atlantic grey seals (Halichoerus grypus). Molecular Ecology, 20(4), 740-752. https://doi.org/10.1111/j.1365-294x.2010.04975.x
Cammen, K., Hoffman, Joseph, Knapp, L. A., Harwood, J., and Amos, W. 2011. “Geographic variation of the major histocompatibility complex in Eastern Atlantic grey seals (Halichoerus grypus).”. Molecular Ecology 20 (4): 740-752.
Cammen, K., Hoffman, J., Knapp, L. A., Harwood, J., and Amos, W. (2011). Geographic variation of the major histocompatibility complex in Eastern Atlantic grey seals (Halichoerus grypus). Molecular Ecology 20, 740-752.
Cammen, K., et al., 2011. Geographic variation of the major histocompatibility complex in Eastern Atlantic grey seals (Halichoerus grypus). Molecular Ecology, 20(4), p 740-752.
K. Cammen, et al., “Geographic variation of the major histocompatibility complex in Eastern Atlantic grey seals (Halichoerus grypus).”, Molecular Ecology, vol. 20, 2011, pp. 740-752.
Cammen, K., Hoffman, J., Knapp, L.A., Harwood, J., Amos, W.: Geographic variation of the major histocompatibility complex in Eastern Atlantic grey seals (Halichoerus grypus). Molecular Ecology. 20, 740-752 (2011).
Cammen, K., Hoffman, Joseph, Knapp, L. A., Harwood, J., and Amos, W. “Geographic variation of the major histocompatibility complex in Eastern Atlantic grey seals (Halichoerus grypus).”. Molecular Ecology 20.4 (2011): 740-752.

18 Zitationen in Europe PMC

Daten bereitgestellt von Europe PubMed Central.

The Marine Mammal Class II Major Histocompatibility Complex Organization.
de Sá ALA, Breaux B, Burlamaqui TCT, Deiss TC, Sena L, Criscitiello MF, Schneider MPC., Front Immunol 10(), 2019
PMID: 31019512
Genomic signatures of population bottleneck and recovery in Northwest Atlantic pinnipeds.
Cammen KM, Schultz TF, Don Bowen W, Hammill MO, Puryear WB, Runstadler J, Wenzel FW, Wood SA, Kinnison M., Ecol Evol 8(13), 2018
PMID: 30038760
The Effect of Balancing Selection on Population Differentiation: A Study with HLA Genes.
Brandt DYC, César J, Goudet J, Meyer D., G3 (Bethesda) 8(8), 2018
PMID: 29950428
Balancing selection and recombination as evolutionary forces caused population genetic variations in golden pheasant MHC class I genes.
Zeng QQ, He K, Sun DD, Ma MY, Ge YF, Fang SG, Wan QH., BMC Evol Biol 16(), 2016
PMID: 26892934
Disease and freeways drive genetic change in urban bobcat populations.
Serieys LE, Lea A, Pollinger JP, Riley SP, Wayne RK., Evol Appl 8(1), 2015
PMID: 25667604
Large-scale genotyping of highly polymorphic loci by next-generation sequencing: how to overcome the challenges to reliably genotype individuals?
Ferrandiz-Rovira M, Bigot T, Allainé D, Callait-Cardinal MP, Cohas A., Heredity (Edinb) 114(5), 2015
PMID: 25757407
Effects of geographical heterogeneity in species interactions on the evolution of venom genes.
Chang D, Olenzek AM, Duda TF., Proc Biol Sci 282(1805), 2015
PMID: 25788600
Genomewide investigation of adaptation to harmful algal blooms in common bottlenose dolphins (Tursiops truncatus).
Cammen KM, Schultz TF, Rosel PE, Wells RS, Read AJ., Mol Ecol 24(18), 2015
PMID: 26290192
Selection from parasites favours immunogenetic diversity but not divergence among locally adapted host populations.
Tobler M, Plath M, Riesch R, Schlupp I, Grasse A, Munimanda GK, Setzer C, Penn DJ, Moodley Y., J Evol Biol 27(5), 2014
PMID: 24725091
Global population structure and demographic history of the grey seal.
Klimova A, Phillips CD, Fietz K, Olsen MT, Harwood J, Amos W, Hoffman JI., Mol Ecol 23(16), 2014
PMID: 25041117
Comparison of 454 pyrosequencing methods for characterizing the major histocompatibility complex of nonmodel species and the advantages of ultra deep coverage.
Oomen RA, Gillett RM, Kyle CJ., Mol Ecol Resour 13(1), 2013
PMID: 23095905
Comparison of 454 pyrosequencing methods for characterizing the major histocompatibility complex of nonmodel species and the advantages of ultra deep coverage
Oomen RA, Gillett RM, Kyle CJ., Mol Ecol Resour 13(1), 2013
PMID: IND600822927
Divergent allele advantage at MHC-DRB through direct and maternal genotypic effects and its consequences for allele pool composition and mating.
Lenz TL, Mueller B, Trillmich F, Wolf JB., Proc Biol Sci 280(1762), 2013
PMID: 23677346
Factors affecting harp seal (Pagophilus groenlandicus) strandings in the Northwest Atlantic.
Soulen BK, Cammen K, Schultz TF, Johnston DW., PLoS One 8(7), 2013
PMID: 23874759
MHC genotype and near-deterministic mortality in grey seals.
de Assunção-Franco M, Hoffman JI, Harwood J, Amos W., Sci Rep 2(), 2012
PMID: 22997548
Fine-scale spatiotemporal patterns of genetic variation reflect budding dispersal coupled with strong natal philopatry in a cooperatively breeding mammal.
Nichols HJ, Jordan NR, Jamie GA, Cant MA, Hoffman JI., Mol Ecol 21(21), 2012
PMID: 22994210
Natural selection on marine carnivores elaborated a diverse family of classical MHC class I genes exhibiting haplotypic gene content variation and allelic polymorphism.
Hammond JA, Guethlein LA, Norman PJ, Parham P., Immunogenetics 64(12), 2012
PMID: 23001684
Drift and selection influence geographic variation at immune loci of prairie-chickens.
Bollmer JL, Ruder EA, Johnson JA, Eimes JA, Dunn PO., Mol Ecol 20(22), 2011
PMID: 22008237

68 References

Daten bereitgestellt von Europe PubMed Central.

A comparison of variability and population structure for major histocompatibility complex and microsatellite loci in California coastal steelhead (Oncorhynchus mykiss Walbaum).
Aguilar A, Garza JC., Mol. Ecol. 15(4), 2006
PMID: 16599957
Microsatellite variation in grey seals (Halichoerus grypus) shows evidence of genetic differentiation between two British breeding colonies.
Allen PJ, Amos W, Pomeroy PP, Twiss SD., Mol. Ecol. 4(6), 1995
PMID: 8564005
Long-term preservation of whale skin for DNA analysis
Amos, Reports of the International Whaling Commission Special Issue 13(), 1991
Mortality in Grey seal pups: incidence and causes
Anderson, Journal of Zoology, London 189(), 1979
LOSITAN: a workbench to detect molecular adaptation based on a Fst-outlier method.
Antao T, Lopes A, Lopes RJ, Beja-Pereira A, Luikart G., BMC Bioinformatics 9(), 2008
PMID: 18662398
Mortality and morbidity in grey seal pups (Halichoerus grypus). Studies on its causes, effects of environment, the nature and sources of infectious agents and the immunological status of pups
Baker, Journal of Zoology, London 203(), 1984
Further studies on grey seal (Halichoerus grypus) pup mortality on North Rona.
Baker JR., Br. Vet. J. 144(5), 1988
PMID: 3191378
Effects of environment on grey seal (Halichoerus grypus) pup mortality: studies on the Isle of May
Baker, Journal of Zoology, London 216(), 1988
Diversity and duplication of DQB and DRB-like genes of the MHC in baleen whales (suborder: Mysticeti).
Baker CS, Vant MD, Dalebout ML, Lento GM, O'Brien SJ, Yuhki N., Immunogenetics 58(4), 2006
PMID: 16568262

AUTHOR UNKNOWN, 0
Patterns of parental relatedness and pup survival in the grey seal (Halichoerus grypus).
Bean K, Amos W, Pomeroy PP, Twiss SD, Coulson TN, Boyd IL., Mol. Ecol. 13(8), 2004
PMID: 15245408
Evaluating loci for use in the genetic analysis of population structure
Beaumont, Proceedings: Biological Sciences 263(), 1996
Population fragmentation and major histocompatibility complex variation in the spotted suslik, Spermophilus suslicus.
Biedrzycka A, Radwan J., Mol. Ecol. 17(22), 2008
PMID: 19140973
Molecular characterization of expressed DQA and DQB genes in the California sea lion ( Zalophus californianus).
Bowen L, Aldridge BM, Gulland F, Woo J, Van Bonn W, DeLong R, Stott JL, Johnson ML., Immunogenetics 54(5), 2002
PMID: 12185537
Sustained exponential population growth of grey seals at Sable Island, Nova Scotia
Bowen, ICES Journal of Marine Science 60(), 2003
MHC gene configuration variation in geographically disparate populations of California sea lions (Zalophus californianus).
Bowen L, Aldridge BM, Delong R, Melin S, Godinez C, Zavala A, Gulland F, Lowenstine L, Stott JL, Johnson ML., Mol. Ecol. 15(2), 2006
PMID: 16448418
The grey seal (Halichoerus grypus) at North Rona, 1959 to 1968
Boyd, Journal of Zoology 164(), 1971
Three-dimensional structure of the human class II histocompatibility antigen HLA-DR1.
Brown JH, Jardetzky TS, Gorga JC, Stern LJ, Urban RG, Strominger JL, Wiley DC., Nature 364(6432), 1993
PMID: 8316295
A long-term genetic survey of an ungulate population reveals balancing selection acting on MHC through spatial and temporal fluctuations in selection.
Charbonnel N, Pemberton J., Heredity (Edinb) 95(5), 2005
PMID: 16118661
Enhanced immunological surveillance in mice heterozygous at the H-2 gene complex.
Doherty PC, Zinkernagel RM., Nature 256(5512), 1975
PMID: 1079575
Spatial pattern of MHC class II variation in the great snipe (Gallinago media).
Ekblom R, Saether SA, Jacobsson P, Fiske P, Sahlman T, Grahn M, Kalas JA, Hoglund J., Mol. Ecol. 16(7), 2007
PMID: 17391268
Arlequin ver. 3.0: an integrated software package for population genetics data analysis
Excoffier, Evolutionary Bioinformatics Online 1(), 2005
Parasite mediated homogenizing selection at the MHC in guppies.
Fraser BA, Neff BD., Genetica 138(2), 2009
PMID: 19728113
Selection at the MHC class IIB locus across guppy (Poecilia reticulata) populations.
Fraser BA, Ramnarine IW, Neff BD., Heredity (Edinb) 104(2), 2009
PMID: 19639010
Temporal variation at the MHC class IIb in wild populations of the guppy (Poecilia reticulata).
Fraser BA, Ramnarine IW, Neff BD., Evolution 64(7), 2010
PMID: 20148955
Patterns of colonization in a metapopulation of grey seals.
Gaggiotti OE, Jones F, Lee WM, Amos W, Harwood J, Nichols RA., Nature 416(6879), 2002
PMID: 11919630
Dinucleotide repeat polymorphisms at seven anonymous microsatellite loci cloned from the European harbour seal (Phoca vitulina vitulina).
Goodman SJ., Anim. Genet. 28(4), 1997
PMID: 9345732

AUTHOR UNKNOWN, 0
MHC polymorphism and disease resistance in Atlantic salmon (Salmo salar); facing pathogens with single expressed major histocompatibility class I and class II loci.
Grimholt U, Larsen S, Nordmo R, Midtlyng P, Kjoeglum S, Storset A, Saebo S, Stet RJ., Immunogenetics 55(4), 2003
PMID: 12811427
BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
Hall, Nucleic Acids Symposium Series 41(), 1999
Perspective: highly variable loci and their interpretation in evolution and conservation
Hedrick, Evolution 53(), 1999
Pathogen resistance and genetic variation at MHC loci.
Hedrick PW., Evolution 56(10), 2002
PMID: 12449477
A standardized genetic differentiation measure.
Hedrick PW., Evolution 59(8), 2005
PMID: 16329237
Common west African HLA antigens are associated with protection from severe malaria.
Hill AV, Allsopp CE, Kwiatkowski D, Anstey NM, Twumasi P, Rowe PA, Bennett S, Brewster D, McMichael AJ, Greenwood BM., Nature 352(6336), 1991
PMID: 1865923
Molecular genetic diversity and evolution at the MHC DQB locus in four species of pinnipeds.
Hoelzel AR, Stephens JC, O'Brien SJ., Mol. Biol. Evol. 16(5), 1999
PMID: 10335654
Exploring the relationship between parental relatedness and male reproductive success in the Antarctic fur seal Arctocephalus gazella.
Hoffman JI, Boyd IL, Amos W., Evolution 58(9), 2004
PMID: 15521464
Getting long in the tooth: a strong positive correlation between canine size and heterozygosity in Antarctic fur seals Arctocephalus gazella.
Hoffman JI, Hanson N, Forcada J, Trathan PN, Amos W., J. Hered. 101(5), 2010
PMID: 20457622
Pattern of nucleotide substitution at major histocompatibility complex class I loci reveals overdominant selection.
Hughes AL, Nei M., Nature 335(6186), 1988
PMID: 3412472
Nucleotide substitution at major histocompatibility complex class II loci: evidence for overdominant selection.
Hughes AL, Nei M., Proc. Natl. Acad. Sci. U.S.A. 86(3), 1989
PMID: 2492668
THE NUMBER OF ALLELES THAT CAN BE MAINTAINED IN A FINITE POPULATION.
KIMURA M, CROW JF., Genetics 49(), 1964
PMID: 14156929
The HLA system. First of two parts.
Klein J, Sato A., N. Engl. J. Med. 343(10), 2000
PMID: 10974135
The HLA system. Second of two parts.
Klein J, Sato A., N. Engl. J. Med. 343(11), 2000
PMID: 10984567
Nomenclature for the major histocompatibility complexes of different species: a proposal.
Klein J, Bontrop RE, Dawkins RL, Erlich HA, Gyllensten UB, Heise ER, Jones PP, Parham P, Wakeland EK, Watkins DI., Immunogenetics 31(4), 1990
PMID: 2329006
Comparative analysis of population structure across environments and geographical scales at major histocompatibility complex and microsatellite loci in Atlantic salmon (Salmo salar).
Landry C, Bernatchez L., Mol. Ecol. 10(10), 2001
PMID: 11742552
Automated single-strand conformation polymorphism reveals low diversity of a major histocompatibility complex class II gene in the threatened New Zealand sea lion
Lento, Molecular Ecology Notes 3(), 2003
Diversifying selection on MHC class I in the house sparrow (Passer domesticus).
Loiseau C, Richard M, Garnier S, Chastel O, Julliard R, Zoorob R, Sorci G., Mol. Ecol. 18(7), 2009
PMID: 19368641
Does terrestrial epidemiology apply to marine systems?
McCallum, Trends in Ecology and Evolution 19(), 2004
Major histocompatibility complex heterozygote superiority during coinfection.
McClelland EE, Penn DJ, Potts WK., Infect. Immun. 71(4), 2003
PMID: 12654829
Present knowledge of grey seals (Halichoerus grypus) in Faroese waters
Mikkelsen, NAMMCO Science Publications 6(), 2007
Geographic heterogeneity in natural selection on an MHC locus in sockeye salmon.
Miller KM, Kaukinen KH, Beacham TD, Withler RE., Genetica 111(1-3), 2001
PMID: 11841169
Major histocompatibility complex loci are associated with susceptibility of Atlantic salmon to infectious hematopoietic necrosis virus
Miller, Environmental Biology of Fishes 69(), 2004
Analysis of gene diversity in subdivided populations.
Nei M., Proc. Natl. Acad. Sci. U.S.A. 70(12), 1973
PMID: 4519626
Evolution of MHC class IIB in the genome of wild and ornamental guppies, Poecilia reticulata.
van Oosterhout C, Joyce DA, Cummings SM., Heredity (Edinb) 97(2), 2006
PMID: 16736064
MHC heterozygosity confers a selective advantage against multiple-strain infections.
Penn DJ, Damjanovich K, Potts WK., Proc. Natl. Acad. Sci. U.S.A. 99(17), 2002
PMID: 12177415
Philopatry, site fidelity and local kin associations within grey seal breeding colonies
Pomeroy, Ethology 106(), 2000

R, 2008
Analyzing table of statistical tests
Rice, Evolution 43(), 1989

Sambrook, 1989
Limited MHC polymorphism in the southern elephant seal: implications for MHC evolution and marine mammal population biology
Slade, Proceedings of the Royal Society, Series B 249(), 1992
Overdominant vs. frequency-dependent selection at MHC loci.
Slade RW, McCallum HI., Genetics 132(3), 1992
PMID: 1468635
The importance of immune gene variability (MHC) in evolutionary ecology and conservation.
Sommer S., Front. Zool. 2(), 2005
PMID: 16242022

AUTHOR UNKNOWN, 0
How pathogens drive genetic diversity: MHC, mechanisms and misunderstandings
Spurgin, Proceedings of the Royal Society, Series B 277(), 2010
Major histocompatibility complex variation at three class II loci in the northern elephant seal.
Weber DS, Stewart BS, Schienman J, Lehman N., Mol. Ecol. 13(3), 2004
PMID: 14871373
Multiple parasites are driving major histocompatibility complex polymorphism in the wild.
Wegner KM, Reusch TB, Kalbe M., J. Evol. Biol. 16(2), 2003
PMID: 14635861
Estimating F-statistics for the analysis of population structure
Weir, Evolution 38(), 1984
Between-year variation of MHC allele frequencies in great reed warblers: selection or drift?
Westerdahl H, Hansson B, Bensch S, Hasselquist D., J. Evol. Biol. 17(3), 2004
PMID: 15149391
Where have all the fathers gone? An extensive microsatellite analysis of paternity in the grey seal (Halichoerus grypus).
Worthington Wilmer J, Allen PJ, Pomeroy PP, Twiss SD, Amos W., Mol. Ecol. 8(9), 1999
PMID: 10564447
Export

Markieren/ Markierung löschen
Markierte Publikationen

Open Data PUB

Web of Science

Dieser Datensatz im Web of Science®
Quellen

PMID: 21199032
PubMed | Europe PMC

Suchen in

Google Scholar