A preliminary study of genetic factors that influence susceptibility to tuberculosis in the British cattle herd

Driscol E, Hoffman J, Green LE, Amos W (2011)
PLoS ONE 6(4): e18806.

Zeitschriftenaufsatz | Veröffentlicht | Englisch
 
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Autor*in
Driscol, E.; Hoffman, JosephUniBi ; Green, L. E.; Amos, W.
Abstract / Bemerkung
Associations between specific host genes and susceptibility to Mycobacterial infections such as tuberculosis have been reported in several species. Bovine tuberculosis (bTB) impacts greatly the UK cattle industry, yet genetic predispositions have yet to be identified. We therefore used a candidate gene approach to study 384 cattle of which 160 had reacted positively to an antigenic skin test ('reactors'). Our approach was unusual in that it used microsatellite markers, embraced high breed diversity and focused particularly on detecting genes showing heterozygote advantage, a mode of action often overlooked in SNP-based studies. A panel of neutral markers was used to control for population substructure and using a general linear model-based approach we were also able to control for age. We found that substructure was surprisingly weak and identified two genomic regions that were strongly associated with reactor status, identified by markers INRA111 and BMS2753. In general the strength of association detected tended to vary depending on whether age was included in the model. At INRA111 a single genotype appears strongly protective with an overall odds ratio of 2.2, the effect being consistent across nine diverse breeds. Our results suggest that breeding strategies could be devised that would appreciably increase genetic resistance of cattle to bTB (strictly, reduce the frequency of incidence of reactors) with implications for the current debate concerning badger-culling.
Erscheinungsjahr
2011
Zeitschriftentitel
PLoS ONE
Band
6
Ausgabe
4
Art.-Nr.
e18806
ISSN
1932-6203
eISSN
1932-6203
Page URI
https://pub.uni-bielefeld.de/record/2397597

Zitieren

Driscol E, Hoffman J, Green LE, Amos W. A preliminary study of genetic factors that influence susceptibility to tuberculosis in the British cattle herd. PLoS ONE. 2011;6(4): e18806.
Driscol, E., Hoffman, J., Green, L. E., & Amos, W. (2011). A preliminary study of genetic factors that influence susceptibility to tuberculosis in the British cattle herd. PLoS ONE, 6(4), e18806. https://doi.org/10.1371/journal.pone.0018806
Driscol, E., Hoffman, Joseph, Green, L. E., and Amos, W. 2011. “A preliminary study of genetic factors that influence susceptibility to tuberculosis in the British cattle herd”. PLoS ONE 6 (4): e18806.
Driscol, E., Hoffman, J., Green, L. E., and Amos, W. (2011). A preliminary study of genetic factors that influence susceptibility to tuberculosis in the British cattle herd. PLoS ONE 6:e18806.
Driscol, E., et al., 2011. A preliminary study of genetic factors that influence susceptibility to tuberculosis in the British cattle herd. PLoS ONE, 6(4): e18806.
E. Driscol, et al., “A preliminary study of genetic factors that influence susceptibility to tuberculosis in the British cattle herd”, PLoS ONE, vol. 6, 2011, : e18806.
Driscol, E., Hoffman, J., Green, L.E., Amos, W.: A preliminary study of genetic factors that influence susceptibility to tuberculosis in the British cattle herd. PLoS ONE. 6, : e18806 (2011).
Driscol, E., Hoffman, Joseph, Green, L. E., and Amos, W. “A preliminary study of genetic factors that influence susceptibility to tuberculosis in the British cattle herd”. PLoS ONE 6.4 (2011): e18806.

14 Zitationen in Europe PMC

Daten bereitgestellt von Europe PubMed Central.

Prevalence and risk factors of mycobacterial infections in farm and trade cattle in southwestern Nigeria.
Akinseye VO, Adebayo MD, Genesis OO, Adelakun OD, Cadmus SIB., Trop Anim Health Prod 50(4), 2018
PMID: 29274054
An analysis of effects of heterozygosity in dairy cattle for bovine tuberculosis resistance.
Tsairidou S, Allen AR, Pong-Wong R, McBride SH, Wright DM, Matika O, Pooley CM, McDowell SWJ, Glass EJ, Skuce RA, Bishop SC, Woolliams JA., Anim Genet 49(2), 2018
PMID: 29368428
Association of Fasciola gigantica Co-infection With Bovine Tuberculosis Infection and Diagnosis in a Naturally Infected Cattle Population in Africa.
Kelly RF, Callaby R, Egbe NF, Williams DJL, Victor NN, Tanya VN, Sander M, Ndip L, Ngandolo R, Morgan KL, Handel IG, Mazeri S, Muwonge A, de C Bronsvoort BM., Front Vet Sci 5(), 2018
PMID: 30238010
Animal Models for Tuberculosis in Translational and Precision Medicine.
Zhan L, Tang J, Sun M, Qin C., Front Microbiol 8(), 2017
PMID: 28522990
Genome-wide association study identifies novel loci associated with resistance to bovine tuberculosis.
Bermingham ML, Bishop SC, Woolliams JA, Pong-Wong R, Allen AR, McBride SH, Ryder JJ, Wright DM, Skuce RA, McDowell SW, Glass EJ., Heredity (Edinb) 112(5), 2014
PMID: 24496092
Prevalence of bovine tuberculosis and risk factor assessment in cattle in rural livestock areas of Govuro District in the Southeast of Mozambique.
Moiane I, Machado A, Santos N, Nhambir A, Inlamea O, Hattendorf J, Källenius G, Zinsstag J, Correia-Neves M., PLoS One 9(3), 2014
PMID: 24632593
Bovine tuberculosis: within-herd transmission models to support and direct the decision-making process.
Alvarez J, Bezos J, de la Cruz ML, Casal C, Romero B, Domínguez L, de Juan L, Pérez A., Res Vet Sci 97 Suppl(), 2014
PMID: 24875061
Asymptomatic cattle naturally infected with Mycobacterium bovis present exacerbated tissue pathology and bacterial dissemination.
Menin Á, Fleith R, Reck C, Marlow M, Fernandes P, Pilati C, Báfica A., PLoS One 8(1), 2013
PMID: 23326525
Genetic predisposition to pass the standard SICCT test for bovine tuberculosis in British cattle.
Amos W, Brooks-Pollock E, Blackwell R, Driscoll E, Nelson-Flower M, Conlan AJ., PLoS One 8(3), 2013
PMID: 23554880
Gene polymorphisms in African buffalo associated with susceptibility to bovine tuberculosis infection.
le Roex N, Koets AP, van Helden PD, Hoal EG., PLoS One 8(5), 2013
PMID: 23691232
Bovine TB in livestock and wildlife: what's in the genes?
le Roex N, van Helden PD, Koets AP, Hoal EG., Physiol Genomics 45(15), 2013
PMID: 23757394
Field-isolated genotypes of Mycobacterium bovis vary in virulence and influence case pathology but do not affect outbreak size.
Wright DM, Allen AR, Mallon TR, McDowell SW, Bishop SC, Glass EJ, Bermingham ML, Woolliams JA, Skuce RA., PLoS One 8(9), 2013
PMID: 24086351
The influence of cattle breed on susceptibility to bovine tuberculosis in Ethiopia.
Vordermeier M, Ameni G, Berg S, Bishop R, Robertson BD, Aseffa A, Hewinson RG, Young DB., Comp Immunol Microbiol Infect Dis 35(3), 2012
PMID: 22304898
A genome wide association scan of bovine tuberculosis susceptibility in Holstein-Friesian dairy cattle.
Finlay EK, Berry DP, Wickham B, Gormley EP, Bradley DG., PLoS One 7(2), 2012
PMID: 22355315

46 References

Daten bereitgestellt von Europe PubMed Central.

DEFRA expenditure report.
Anon null., 2008
Bovine TB: the scientific evidence.
Bourne J, Donnelly CA, Cox D, Gettinby G, McInerny J., 2007
Use of cattle farm resources by badgers (Meles meles) and risk of bovine tuberculosis (Mycobacterium bovis) transmission to cattle.
Garnett BT, Delahay RJ, Roper TJ., 2002
Risks for bovine tuberculosis in British cattle farms restocked after the foot and mouth disease epidemic of 2001.
Carrique-Mas JJ, Medley GF, Green LE., 2008
Herd and individual animal risks associated with bovine tuberculosis skin test positivity in cattle in herds in south west England.
Ramírez-Villescusa AM, Medley GF, Mason S, Green LE., 2009
Genetic susceptibility to mycobacteria and other infectious pathogens in humans.
Bellamy R, Hill AV., Curr. Opin. Immunol. 10(4), 1998
PMID: 9722927
Mapping of a novel susceptibility locus suggests a role for MC3R and CTSZ in human tuberculosis.
Cooke GS, Campbell SJ, Bennett S, Lienhardt C, McAdam KP, Sirugo G, Sow O, Gustafson P, Mwangulu F, van Helden P, Fine P, Hoal EG, Hill AV., Am. J. Respir. Crit. Care Med. 178(2), 2008
PMID: 18420963
Gene expression profiles of European wild boar naturally infected with Mycobacterium bovis.
Galindo RC, Ayoubi P, Naranjo V, Gortazar C, Kocan KM., 2009
Genetic resistance to bovine tuberculosis in the Iberian wild boar.
Acevedo-Whitehouse K, Vicente J, Gortazar C, Hofle U, Fernandez-de-Mera IG, Amos W., Mol. Ecol. 14(10), 2005
PMID: 16101786
Innate gene repression associated with Mycobacterium bovis infection in cattle: toward a gene signature of disease.
Meade KG, Gormley E, Doyle MB, Fitzsimons T, O'Farrelly C, Costello E, Keane J, Zhao Y, MacHugh DE., BMC Genomics 8(), 2007
PMID: 17974019
Genetics of tuberculosis in Irish Holstein-Friesian dairy herds.
Bermingham ML, More SJ, Good M, Cromie AR, Higgins IM, Brotherstone S, Berry DP., J. Dairy Sci. 92(7), 2009
PMID: 19528623
Bovine tuberculosis: the genetic basis of host susceptibility.
Allen AR, Minozzi G, Glass EJ, Skuce RA, McDowell SWJ., 2010
Development of breed identification markers based on a bovine 50K SNP array.
Suekawa Y, Aihara H, Araki M, Hosokawa D, Mannen H, Sasazaki S., Meat Sci. 85(2), 2010
PMID: 20374900
Were genome-wide linkage studies a waste of time? Exploiting candidate regions within genome-wide association studies.
Yoo YJ, Bull SB, Paterson AD, Waggott D, Sun L; Diabetes Control and Complications Trial/Epidemiology of Diabetes Interventions and Complications Research Group., Genet. Epidemiol. 34(2), 2010
PMID: 19626703
Genetic association mapping at the crossroads: which test and why? Overview and practical guidelines.
Schulze TG, McMahon FJ., 2002
Principal components analysis corrects for stratification in genome-wide association studies.
Price AL, Patterson NJ, Plenge RM, Weinblatt ME, Shadick NA, Reich D., Nat. Genet. 38(8), 2006
PMID: 16862161
Direct link between mhc polymorphism, T cell avidity, and diversity in immune defense.
Messaoudi I, Guevara Patino JA, Dyall R, LeMaoult J, Nikolich-Zugich J., Science 298(5599), 2002
PMID: 12459592
Homozygosity and risk of childhood death due to invasive bacterial disease.
Lyons EJ, Amos W, Berkley JA, Mwangi I, Shafi M, Williams TN, Newton CR, Peshu N, Marsh K, Scott JA, Hill AV., BMC Med. Genet. 10(), 2009
PMID: 19523202
Using human demographic history to infer natural selection reveals contrasting patterns on different families of immune genes.
Amos W, Bryant C., 2010
Ante mortem diagnosis of tuberculosis in cattle: a review of the tuberculin tests, gamma-interferon assay and other ancillary diagnostic techniques.
de la Rua-Domenech R, Goodchild AT, Vordermeier HM, Hewinson RG, Christiansen KH, Clifton-Hadley RS., Res. Vet. Sci. 81(2), 2006
PMID: 16513150
Signalling pathways and molecular interactions of NOD1 and NOD2.
Strober W, Murray PJ, Kitani A, Watanabe T., Nat. Rev. Immunol. 6(1), 2006
PMID: 16493424
NOD2 and Toll-like receptors are non-redundant recognition systems of Mycobacterium tuberculosis.
Ferwerda G, Girardin SE, Kullberg B-J, Le L, de DJ., 2005
Identification of immune response correlates for protection against bovine tuberculosis.
Buddle BM, Wedlock DN, Denis M, Skinner MA., 2005
Diagnostic implications of antigen-induced gamma interferon, nitric oxide and tumour necrosis factor alpha production by peripheral blood mononuclear cells from Mycobacterium bovis-infected cattle.
Waters WR, Palmer MV, Whipple DL, Carlson MP, Nonnecke BJ., 2003
Investigation of environmental and host-related factors of tuberculosis in Africa. II Investigation of host genetic factors.
Bennett S, Lienhardt C, Bah-Sow O, Gustafson P, Manneh K., 2002
High-level expression of NRAMP1 in peripheral blood cells and tuberculous granulomas from Mycobacterium bovis-infected bovines.
Estrada-Chavez C, Pereira-Suarez AL, Meraz MA, Arriaga C, Garcia-Carranca A, Sanchez-Rodriguez C, Mancilla R., Infect. Immun. 69(11), 2001
PMID: 11598095
SLC11A1 (formerly NRAMP1) gene polymorphisms and tuberculosis susceptibility: a meta-analysis.
Li HT, Zhang TT, Zhou YQ, Huang QH, Huang J., Int. J. Tuberc. Lung Dis. 10(1), 2006
PMID: 16466030
Association mapping in structured populations.
Pritchard JK, Stephens M, Rosenberg NA, Donnelly P., Am. J. Hum. Genet. 67(1), 2000
PMID: 10827107
Population stratification and spurious allelic association.
Cardon LR, Palmer LJ., Lancet 361(9357), 2003
PMID: 12598158
Inference of population structure using multilocus genotype data.
Pritchard JK, Stephens M, Donnelly P., Genetics 155(2), 2000
PMID: 10835412
Population structure and eigenanalysis.
Patterson N, Price AL, Reich D., PLoS Genet. 2(12), 2006
PMID: 17194218
Tests for linear trends in proportions and frequencies.
Armitage P., 1955

AUTHOR UNKNOWN, 2009
A new test for genotype - fitness associations reveals a single microsatellite allele that strongly predicts the nature of tuberculosis infections in wild boar.
Amos W, Acevedo-Whitehouse KA., 2009
Comparison of statistical power between 2 * 2 allele frequency and allele positivity tables in case-control studies of complex disease genes.
Ohashi J, Yamamoto S, Tsuchiya N, Hatta Y, Komata T, Matsushita M, Tokunaga K., Ann. Hum. Genet. 65(Pt 2), 2001
PMID: 11434330
A simple and improved correction for population stratification in case-control studies.
Epstein MP, Allen AS, Satten GA., Am. J. Hum. Genet. 80(5), 2007
PMID: 17436246
Population genetic structure of the Brahman cattle (Bos indicus) in Columbia with microsatellite markers.
Novoa MA, Usaquén W., 2010
Genetic susceptibility to mycobacterial disease in humans.
Fernando SL, Britton WJ., Immunol. Cell Biol. 84(2), 2006
PMID: 16519730
Candidate genes versus genome-wide associations: which are better for detecting genetic susceptibility to infectious disease?
Amos W, Driscoll E, Hoffman JI., 2010
Quantitative trait Loci for health traits in Finnish Ayrshire cattle.
Schulman NF, Viitala SM, de Koning DJ, Virta J, Maki-Tanila A, Vilkki JH., J. Dairy Sci. 87(2), 2004
PMID: 14762087
Mycobacterium bovis bacillus Calmette-Guérin infection promotes SOCS induction and inhibits IFN-Q-stimulated JAK/STAT signaling in J774 macrophages.
Imai K, Kurita-Ochiai T, Ochiai K., 2003
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