Bayesian inference of a historical genetic bottleneck in a heavily exploited marine mammal
Hoffman J, Grant SM, Forcada J, Phillips CD (2011)
Molecular Ecology 20(19): 3989-4008.
Zeitschriftenaufsatz
| Veröffentlicht | Englisch
Download
Es wurden keine Dateien hochgeladen. Nur Publikationsnachweis!
Autor*in
Hoffman, JosephUniBi ;
Grant, S. M.;
Forcada, J.;
Phillips, C. D.
Einrichtung
Erscheinungsjahr
2011
Zeitschriftentitel
Molecular Ecology
Band
20
Ausgabe
19
Seite(n)
3989-4008
ISSN
0962-1083
Page URI
https://pub.uni-bielefeld.de/record/2397475
Zitieren
Hoffman J, Grant SM, Forcada J, Phillips CD. Bayesian inference of a historical genetic bottleneck in a heavily exploited marine mammal. Molecular Ecology. 2011;20(19):3989-4008.
Hoffman, J., Grant, S. M., Forcada, J., & Phillips, C. D. (2011). Bayesian inference of a historical genetic bottleneck in a heavily exploited marine mammal. Molecular Ecology, 20(19), 3989-4008. https://doi.org/10.1111/j.1365-294X.2011.05248.x
Hoffman, Joseph, Grant, S. M., Forcada, J., and Phillips, C. D. 2011. “Bayesian inference of a historical genetic bottleneck in a heavily exploited marine mammal”. Molecular Ecology 20 (19): 3989-4008.
Hoffman, J., Grant, S. M., Forcada, J., and Phillips, C. D. (2011). Bayesian inference of a historical genetic bottleneck in a heavily exploited marine mammal. Molecular Ecology 20, 3989-4008.
Hoffman, J., et al., 2011. Bayesian inference of a historical genetic bottleneck in a heavily exploited marine mammal. Molecular Ecology, 20(19), p 3989-4008.
J. Hoffman, et al., “Bayesian inference of a historical genetic bottleneck in a heavily exploited marine mammal”, Molecular Ecology, vol. 20, 2011, pp. 3989-4008.
Hoffman, J., Grant, S.M., Forcada, J., Phillips, C.D.: Bayesian inference of a historical genetic bottleneck in a heavily exploited marine mammal. Molecular Ecology. 20, 3989-4008 (2011).
Hoffman, Joseph, Grant, S. M., Forcada, J., and Phillips, C. D. “Bayesian inference of a historical genetic bottleneck in a heavily exploited marine mammal”. Molecular Ecology 20.19 (2011): 3989-4008.
Daten bereitgestellt von European Bioinformatics Institute (EBI)
EMBL
37 Zitationen in Europe PMC
Daten bereitgestellt von Europe PubMed Central.
Genetic signatures of small effective population sizes and demographic declines in an endangered rattlesnake, Sistrurus catenatus.
Sovic M, Fries A, Martin SA, Lisle Gibbs H., Evol Appl 12(4), 2019
PMID: 30976301
Sovic M, Fries A, Martin SA, Lisle Gibbs H., Evol Appl 12(4), 2019
PMID: 30976301
Genetic population structure and demography of an apex predator, the tiger shark Galeocerdo cuvier.
Pirog A, Jaquemet S, Ravigné V, Cliff G, Clua E, Holmes BJ, Hussey NE, Nevill JEG, Temple AJ, Berggren P, Vigliola L, Magalon H., Ecol Evol 9(10), 2019
PMID: 31160982
Pirog A, Jaquemet S, Ravigné V, Cliff G, Clua E, Holmes BJ, Hussey NE, Nevill JEG, Temple AJ, Berggren P, Vigliola L, Magalon H., Ecol Evol 9(10), 2019
PMID: 31160982
Effective population size and the genetic consequences of commercial whaling on the humpback whales (Megaptera novaeangliae) from Southwestern Atlantic Ocean.
Cypriano-Souza AL, da Silva TF, Engel MH, Bonatto SL., Genet Mol Biol 41(1 suppl 1), 2018
PMID: 29668011
Cypriano-Souza AL, da Silva TF, Engel MH, Bonatto SL., Genet Mol Biol 41(1 suppl 1), 2018
PMID: 29668011
RAD Sequencing and a Hybrid Antarctic Fur Seal Genome Assembly Reveal Rapidly Decaying Linkage Disequilibrium, Global Population Structure and Evidence for Inbreeding.
Humble E, Dasmahapatra KK, Martinez-Barrio A, Gregório I, Forcada J, Polikeit AC, Goldsworthy SD, Goebel ME, Kalinowski J, Wolf JBW, Hoffman JI., G3 (Bethesda) 8(8), 2018
PMID: 29954843
Humble E, Dasmahapatra KK, Martinez-Barrio A, Gregório I, Forcada J, Polikeit AC, Goldsworthy SD, Goebel ME, Kalinowski J, Wolf JBW, Hoffman JI., G3 (Bethesda) 8(8), 2018
PMID: 29954843
Reduced representation sequencing detects only subtle regional structure in a heavily exploited and rapidly recolonizing marine mammal species.
Dussex N, Taylor HR, Stovall WR, Rutherford K, Dodds KG, Clarke SM, Gemmell NJ., Ecol Evol 8(17), 2018
PMID: 30271541
Dussex N, Taylor HR, Stovall WR, Rutherford K, Dodds KG, Clarke SM, Gemmell NJ., Ecol Evol 8(17), 2018
PMID: 30271541
A global cline in a colour polymorphism suggests a limited contribution of gene flow towards the recovery of a heavily exploited marine mammal.
Hoffman JI, Bauer E, Paijmans AJ, Humble E, Beckmann LM, Kubetschek C, Christaller F, Kröcker N, Fuchs B, Moreras A, Shihlomule YD, Bester MN, Cleary AC, De Bruyn PJN, Forcada J, Goebel ME, Goldsworthy SD, Guinet C, Hoelzel AR, Lydersen C, Kovacs KM, Lowther A., R Soc Open Sci 5(10), 2018
PMID: 30473858
Hoffman JI, Bauer E, Paijmans AJ, Humble E, Beckmann LM, Kubetschek C, Christaller F, Kröcker N, Fuchs B, Moreras A, Shihlomule YD, Bester MN, Cleary AC, De Bruyn PJN, Forcada J, Goebel ME, Goldsworthy SD, Guinet C, Hoelzel AR, Lydersen C, Kovacs KM, Lowther A., R Soc Open Sci 5(10), 2018
PMID: 30473858
Demographic histories and genetic diversity across pinnipeds are shaped by human exploitation, ecology and life-history.
Stoffel MA, Humble E, Paijmans AJ, Acevedo-Whitehouse K, Chilvers BL, Dickerson B, Galimberti F, Gemmell NJ, Goldsworthy SD, Nichols HJ, Krüger O, Negro S, Osborne A, Pastor T, Robertson BC, Sanvito S, Schultz JK, Shafer ABA, Wolf JBW, Hoffman JI., Nat Commun 9(1), 2018
PMID: 30446730
Stoffel MA, Humble E, Paijmans AJ, Acevedo-Whitehouse K, Chilvers BL, Dickerson B, Galimberti F, Gemmell NJ, Goldsworthy SD, Nichols HJ, Krüger O, Negro S, Osborne A, Pastor T, Robertson BC, Sanvito S, Schultz JK, Shafer ABA, Wolf JBW, Hoffman JI., Nat Commun 9(1), 2018
PMID: 30446730
Ecological and genetic impact of the 2011 Tohoku Earthquake Tsunami on intertidal mud snails.
Miura O, Kanaya G, Nakai S, Itoh H, Chiba S, Makino W, Nishimura T, Kojima S, Urabe J., Sci Rep 7(), 2017
PMID: 28281698
Miura O, Kanaya G, Nakai S, Itoh H, Chiba S, Makino W, Nishimura T, Kojima S, Urabe J., Sci Rep 7(), 2017
PMID: 28281698
Reconsidering connectivity in the sub-Antarctic.
Moon KL, Chown SL, Fraser CI., Biol Rev Camb Philos Soc 92(4), 2017
PMID: 28371192
Moon KL, Chown SL, Fraser CI., Biol Rev Camb Philos Soc 92(4), 2017
PMID: 28371192
Inferring past demographic changes from contemporary genetic data: A simulation-based evaluation of the ABC methods implemented in diyabc.
Cabrera AA, Palsbøll PJ., Mol Ecol Resour 17(6), 2017
PMID: 28654208
Cabrera AA, Palsbøll PJ., Mol Ecol Resour 17(6), 2017
PMID: 28654208
Born blonde: a recessive loss-of-function mutation in the melanocortin 1 receptor is associated with cream coat coloration in Antarctic fur seals.
Peters L, Humble E, Kröcker N, Fuchs B, Forcada J, Hoffman JI., Ecol Evol 6(16), 2016
PMID: 27547348
Peters L, Humble E, Kröcker N, Fuchs B, Forcada J, Hoffman JI., Ecol Evol 6(16), 2016
PMID: 27547348
Population structure and historical demography of South American sea lions provide insights into the catastrophic decline of a marine mammal population.
Hoffman JI, Kowalski GJ, Klimova A, Eberhart-Phillips LJ, Staniland IJ, Baylis AM., R Soc Open Sci 3(7), 2016
PMID: 27493782
Hoffman JI, Kowalski GJ, Klimova A, Eberhart-Phillips LJ, Staniland IJ, Baylis AM., R Soc Open Sci 3(7), 2016
PMID: 27493782
Low Spatial Genetic Differentiation Associated with Rapid Recolonization in the New Zealand Fur Seal Arctocephalus forsteri.
Dussex N, Robertson BC, Salis AT, Kalinin A, Best H, Gemmell NJ., J Hered 107(7), 2016
PMID: 27563072
Dussex N, Robertson BC, Salis AT, Kalinin A, Best H, Gemmell NJ., J Hered 107(7), 2016
PMID: 27563072
Naturally rare versus newly rare: demographic inferences on two timescales inform conservation of Galápagos giant tortoises.
Garrick RC, Kajdacsi B, Russello MA, Benavides E, Hyseni C, Gibbs JP, Tapia W, Caccone A., Ecol Evol 5(3), 2015
PMID: 25691990
Garrick RC, Kajdacsi B, Russello MA, Benavides E, Hyseni C, Gibbs JP, Tapia W, Caccone A., Ecol Evol 5(3), 2015
PMID: 25691990
Contrasting genetic diversity and population structure among three sympatric Madagascan shorebirds: parallels with rarity, endemism, and dispersal.
Eberhart-Phillips LJ, Hoffman JI, Brede EG, Zefania S, Kamrad MJ, Székely T, Bruford MW., Ecol Evol 5(5), 2015
PMID: 25798218
Eberhart-Phillips LJ, Hoffman JI, Brede EG, Zefania S, Kamrad MJ, Székely T, Bruford MW., Ecol Evol 5(5), 2015
PMID: 25798218
Ancient and contemporary DNA reveal a pre-human decline but no population bottleneck associated with recent human persecution in the kea (Nestor notabilis).
Dussex N, Rawlence NJ, Robertson BC., PLoS One 10(2), 2015
PMID: 25719752
Dussex N, Rawlence NJ, Robertson BC., PLoS One 10(2), 2015
PMID: 25719752
High genetic diversity in the endangered and narrowly distributed amphibian species Leptobrachium leishanense.
Zhang W, Luo Z, Zhao M, Wu H., Integr Zool 10(5), 2015
PMID: 26037662
Zhang W, Luo Z, Zhao M, Wu H., Integr Zool 10(5), 2015
PMID: 26037662
Fine-scale matrilineal population structure in the Galapagos fur seal and its implications for conservation management
Lopes F, Hoffman JI, Valiati VH, Bonatto SL, Wolf JBW, Trillmich F, Oliveira LR., Conserv Genet 16(5), 2015
PMID: IND604394511
Lopes F, Hoffman JI, Valiati VH, Bonatto SL, Wolf JBW, Trillmich F, Oliveira LR., Conserv Genet 16(5), 2015
PMID: IND604394511
Population genetic structure at the northern range limit of the threatened eastern hog-nosed snake (Heterodon platirhinos)
Xuereb ATJ, Rouse JD, Cunnington G, Lougheed SC., Conserv Genet 16(6), 2015
PMID: IND604492972
Xuereb ATJ, Rouse JD, Cunnington G, Lougheed SC., Conserv Genet 16(6), 2015
PMID: IND604492972
Laboratory colonisation and genetic bottlenecks in the tsetse fly Glossina pallidipes.
Ciosi M, Masiga DK, Turner CM., PLoS Negl Trop Dis 8(2), 2014
PMID: 24551260
Ciosi M, Masiga DK, Turner CM., PLoS Negl Trop Dis 8(2), 2014
PMID: 24551260
Greece: a Balkan subrefuge for a remnant red deer (cervus elaphus) population.
Karaiskou N, Tsakogiannis A, Gkagkavouzis K, Operator of Parnitha National Park, Papika S, Latsoudis P, Kavakiotis I, Pantis J, Abatzopoulos TJ, Triantaphyllidis C, Triantafyllidis A., J Hered 105(3), 2014
PMID: 24558101
Karaiskou N, Tsakogiannis A, Gkagkavouzis K, Operator of Parnitha National Park, Papika S, Latsoudis P, Kavakiotis I, Pantis J, Abatzopoulos TJ, Triantaphyllidis C, Triantafyllidis A., J Hered 105(3), 2014
PMID: 24558101
High genetic diversity in a small population: the case of Chilean blue whales.
Torres-Florez JP, Hucke-Gaete R, Rosenbaum H, Figueroa CC., Ecol Evol 4(8), 2014
PMID: 24834336
Torres-Florez JP, Hucke-Gaete R, Rosenbaum H, Figueroa CC., Ecol Evol 4(8), 2014
PMID: 24834336
Demographic history of a recent invasion of house mice on the isolated Island of Gough.
Gray MM, Wegmann D, Haasl RJ, White MA, Gabriel SI, Searle JB, Cuthbert RJ, Ryan PG, Payseur BA., Mol Ecol 23(8), 2014
PMID: 24617968
Gray MM, Wegmann D, Haasl RJ, White MA, Gabriel SI, Searle JB, Cuthbert RJ, Ryan PG, Payseur BA., Mol Ecol 23(8), 2014
PMID: 24617968
Detecting past changes of effective population size.
Nikolic N, Chevalet C., Evol Appl 7(6), 2014
PMID: 25067949
Nikolic N, Chevalet C., Evol Appl 7(6), 2014
PMID: 25067949
Mixed fortunes: ancient expansion and recent decline in population size of a subtropical montane primate, the Arunachal macaque Macaca munzala.
Chakraborty D, Sinha A, Ramakrishnan U., PLoS One 9(7), 2014
PMID: 25054863
Chakraborty D, Sinha A, Ramakrishnan U., PLoS One 9(7), 2014
PMID: 25054863
Global population structure and demographic history of the grey seal.
Klimova A, Phillips CD, Fietz K, Olsen MT, Harwood J, Amos W, Hoffman JI., Mol Ecol 23(16), 2014
PMID: 25041117
Klimova A, Phillips CD, Fietz K, Olsen MT, Harwood J, Amos W, Hoffman JI., Mol Ecol 23(16), 2014
PMID: 25041117
Museum DNA reveals the demographic history of the endangered Seychelles warbler.
Spurgin LG, Wright DJ, van der Velde M, Collar NJ, Komdeur J, Burke T, Richardson DS., Evol Appl 7(9), 2014
PMID: 25553073
Spurgin LG, Wright DJ, van der Velde M, Collar NJ, Komdeur J, Burke T, Richardson DS., Evol Appl 7(9), 2014
PMID: 25553073
Demographic histories and genetic diversities of Fennoscandian marine and landlocked ringed seal subspecies.
Nyman T, Valtonen M, Aspi J, Ruokonen M, Kunnasranta M, Palo JU., Ecol Evol 4(17), 2014
PMID: 25535558
Nyman T, Valtonen M, Aspi J, Ruokonen M, Kunnasranta M, Palo JU., Ecol Evol 4(17), 2014
PMID: 25535558
Demographic response of cutlassfish (Trichiurus japonicus and T. nanhaiensis) to fluctuating palaeo-climate and regional oceanographic conditions in the China seas.
He L, Zhang A, Weese D, Li S, Li J, Zhang J., Sci Rep 4(), 2014
PMID: 25223336
He L, Zhang A, Weese D, Li S, Li J, Zhang J., Sci Rep 4(), 2014
PMID: 25223336
Inferring recent historic abundance from current genetic diversity.
Palsbøll PJ, Zachariah Peery M, Olsen MT, Beissinger SR, Bérubé M., Mol Ecol 22(1), 2013
PMID: 23181682
Palsbøll PJ, Zachariah Peery M, Olsen MT, Beissinger SR, Bérubé M., Mol Ecol 22(1), 2013
PMID: 23181682
Transcriptome of the dead: characterisation of immune genes and marker development from necropsy samples in a free-ranging marine mammal.
Hoffman JI, Thorne MA, Trathan PN, Forcada J., BMC Genomics 14(), 2013
PMID: 23347513
Hoffman JI, Thorne MA, Trathan PN, Forcada J., BMC Genomics 14(), 2013
PMID: 23347513
Past and future demographic dynamics of alpine species: limited genetic consequences despite dramatic range contraction in a plant from the Spanish Sierra Nevada.
Blanco-Pastor JL, Fernández-Mazuecos M, Vargas P., Mol Ecol 22(16), 2013
PMID: 23844700
Blanco-Pastor JL, Fernández-Mazuecos M, Vargas P., Mol Ecol 22(16), 2013
PMID: 23844700
Unexpected genetic differentiation between recently recolonized populations of a long-lived and highly vagile marine mammal.
Bonin CA, Goebel ME, Forcada J, Burton RS, Hoffman JI., Ecol Evol 3(11), 2013
PMID: 24198934
Bonin CA, Goebel ME, Forcada J, Burton RS, Hoffman JI., Ecol Evol 3(11), 2013
PMID: 24198934
Demographic divergence history of pied flycatcher and collared flycatcher inferred from whole-genome re-sequencing data.
Nadachowska-Brzyska K, Burri R, Olason PI, Kawakami T, Smeds L, Ellegren H., PLoS Genet 9(11), 2013
PMID: 24244198
Nadachowska-Brzyska K, Burri R, Olason PI, Kawakami T, Smeds L, Ellegren H., PLoS Genet 9(11), 2013
PMID: 24244198
Molecular insights into the historic demography of bowhead whales: understanding the evolutionary basis of contemporary management practices.
Phillips CD, Hoffman JI, George JC, Suydam RS, Huebinger RM, Patton JC, Bickham JW., Ecol Evol 3(1), 2012
PMID: 23403722
Phillips CD, Hoffman JI, George JC, Suydam RS, Huebinger RM, Patton JC, Bickham JW., Ecol Evol 3(1), 2012
PMID: 23403722
Reliability of genetic bottleneck tests for detecting recent population declines.
Peery MZ, Kirby R, Reid BN, Stoelting R, Doucet-Bëer E, Robinson S, Vásquez-Carrillo C, Pauli JN, Palsbøll PJ., Mol Ecol 21(14), 2012
PMID: 22646281
Peery MZ, Kirby R, Reid BN, Stoelting R, Doucet-Bëer E, Robinson S, Vásquez-Carrillo C, Pauli JN, Palsbøll PJ., Mol Ecol 21(14), 2012
PMID: 22646281
Cape buffalo mitogenomics reveals a Holocene shift in the African human-megafauna dynamics.
Heller R, Brüniche-Olsen A, Siegismund HR., Mol Ecol 21(16), 2012
PMID: 22725969
Heller R, Brüniche-Olsen A, Siegismund HR., Mol Ecol 21(16), 2012
PMID: 22725969
101 References
Daten bereitgestellt von Europe PubMed Central.
Bank voles in linear habitats show restricted gene flow as revealed by mitochondrial DNA (mtDNA).
Aars J, Ims RA, Liu HP, Mulvey M, Smith MH., Mol. Ecol. 7(10), 1998
PMID: 9787447
Aars J, Ims RA, Liu HP, Mulvey M, Smith MH., Mol. Ecol. 7(10), 1998
PMID: 9787447
Microsatellite variation in grey seals (Halichoerus grypus) shows evidence of genetic differentiation between two British breeding colonies.
Allen PJ, Amos W, Pomeroy PP, Twiss SD., Mol. Ecol. 4(6), 1995
PMID: 8564005
Allen PJ, Amos W, Pomeroy PP, Twiss SD., Mol. Ecol. 4(6), 1995
PMID: 8564005
Factors affecting levels of genetic diversity in natural populations
Amos, Philosophical Transactions of the Royal Society of London Series B-Biological Sciences 353(), 1998
Amos, Philosophical Transactions of the Royal Society of London Series B-Biological Sciences 353(), 1998
Monte Carlo evaluation of the likelihood for N(e) from temporally spaced samples.
Anderson EC, Williamson EG, Thompson EA., Genetics 156(4), 2000
PMID: 11102399
Anderson EC, Williamson EG, Thompson EA., Genetics 156(4), 2000
PMID: 11102399
Median-joining networks for inferring intraspecific phylogenies.
Bandelt HJ, Forster P, Rohl A., Mol. Biol. Evol. 16(1), 1999
PMID: 10331250
Bandelt HJ, Forster P, Rohl A., Mol. Biol. Evol. 16(1), 1999
PMID: 10331250
Estimation of population growth or decline in genetically monitored populations.
Beaumont MA., Genetics 164(3), 2003
PMID: 12871921
Beaumont MA., Genetics 164(3), 2003
PMID: 12871921
Approximate Bayesian computation in population genetics.
Beaumont MA, Zhang W, Balding DJ., Genetics 162(4), 2002
PMID: 12524368
Beaumont MA, Zhang W, Balding DJ., Genetics 162(4), 2002
PMID: 12524368
Application of genetic bottleneck testing to the investigation of Amphibian declines: a case study with Natterjack Toads
Beebee, Conservation Biology 15(), 2001
Beebee, Conservation Biology 15(), 2001
ABC as a flexible framework to estimate demography over space and time: some cons, many pros.
Bertorelle G, Benazzo A, Mona S., Mol. Ecol. 19(13), 2010
PMID: 20561199
Bertorelle G, Benazzo A, Mona S., Mol. Ecol. 19(13), 2010
PMID: 20561199
AUTHOR UNKNOWN, 0
Pup production and distribution of breeding Antarctic fur seals (Arctocephalus gazella) at South Georgia
Boyd, Antarctic Science 5(), 1993
Boyd, Antarctic Science 5(), 1993
Tooth growth in male Antarctic fur seals (Arctocephalus gazella) from South Georgia - an indicator of long-term growth history
Boyd, Journal of Zoology (London) 229(), 1993
Boyd, Journal of Zoology (London) 229(), 1993
Microsatellites from the Atlantic walrus Odobenus rosmarus rosmarus.
Buchanan FC, Maiers LD, Thue TD, De March BG, Stewart RE., Mol. Ecol. 7(8), 1998
PMID: 9711867
Buchanan FC, Maiers LD, Thue TD, De March BG, Stewart RE., Mol. Ecol. 7(8), 1998
PMID: 9711867
Recent demographic bottlenecks are not accompanied by a genetic signature in banner-tailed kangaroo rats (Dipodomys spectabilis).
Busch JD, Waser PM, Dewoody JA., Mol. Ecol. 16(12), 2007
PMID: 17561905
Busch JD, Waser PM, Dewoody JA., Mol. Ecol. 16(12), 2007
PMID: 17561905
Caswell, 2001
Bayesian estimation of the timing and severity of a population bottleneck from ancient DNA.
Chan YL, Anderson CN, Hadly EA., PLoS Genet. 2(4), 2006
PMID: 16636697
Chan YL, Anderson CN, Hadly EA., PLoS Genet. 2(4), 2006
PMID: 16636697
The distribution of coalescence times and distances between microsatellite alleles with changing effective population size
Chevalet, Theoretical Population Biology 77(), 2011
Chevalet, Theoretical Population Biology 77(), 2011
TCS: a computer program to estimate gene genealogies.
Clement M, Posada D, Crandall KA., Mol. Ecol. 9(10), 2000
PMID: 11050560
Clement M, Posada D, Crandall KA., Mol. Ecol. 9(10), 2000
PMID: 11050560
PCR primers for harbour seal (Phoca vitulina concolour) microsatellites amplify polymorphic loci in other pinniped species.
Coltman DW, Bowen WD, Wright JM., Mol. Ecol. 5(1), 1996
PMID: 9147692
Coltman DW, Bowen WD, Wright JM., Mol. Ecol. 5(1), 1996
PMID: 9147692
Description and power analysis of two tests for detecting recent population bottlenecks from allele frequency data.
Cornuet JM, Luikart G., Genetics 144(4), 1996
PMID: 8978083
Cornuet JM, Luikart G., Genetics 144(4), 1996
PMID: 8978083
Inferring population history with DIY ABC: a user-friendly approach to approximate Bayesian computation.
Cornuet JM, Santos F, Beaumont MA, Robert CP, Marin JM, Balding DJ, Guillemaud T, Estoup A., Bioinformatics 24(23), 2008
PMID: 18842597
Cornuet JM, Santos F, Beaumont MA, Robert CP, Marin JM, Balding DJ, Guillemaud T, Estoup A., Bioinformatics 24(23), 2008
PMID: 18842597
Inference on population history and model checking using DNA sequence and microsatellite data with the software DIYABC (v1.0).
Cornuet JM, Ravigne V, Estoup A., BMC Bioinformatics 11(), 2010
PMID: 20667077
Cornuet JM, Ravigne V, Estoup A., BMC Bioinformatics 11(), 2010
PMID: 20667077
Pleistocene population expansions of Antarctic seals.
Curtis C, Stewart BS, Karl SA., Mol. Ecol. 18(10), 2009
PMID: 19344354
Curtis C, Stewart BS, Karl SA., Mol. Ecol. 18(10), 2009
PMID: 19344354
Dinucleotide microsatellite markers from the Antarctic seals and their use in other pinnipeds
Davis, Molecular Ecology Notes 2(), 2002
Davis, Molecular Ecology Notes 2(), 2002
Mutational processes of simple sequence repeat loci in human populations
Di, Proceedings of the National Academy of Sciences, USA 91(), 1994
Di, Proceedings of the National Academy of Sciences, USA 91(), 1994
Population structure as revealed by mtDNA and microsatellites in northern fur seals, Callorhinus ursinus, throughout their range.
Dickerson BR, Ream RR, Vignieri SN, Bentzen P., PLoS ONE 5(5), 2010
PMID: 20498854
Dickerson BR, Ream RR, Vignieri SN, Bentzen P., PLoS ONE 5(5), 2010
PMID: 20498854
Density-dependent pup mortality in the Antarctic fur seal Arctocephalus gazella at South Georgia
Doidge, Journal of Zoology (London) 202(), 1984
Doidge, Journal of Zoology (London) 202(), 1984
BEAST: Bayesian evolutionary analysis by sampling trees.
Drummond AJ, Rambaut A., BMC Evol. Biol. 7(), 2007
PMID: 17996036
Drummond AJ, Rambaut A., BMC Evol. Biol. 7(), 2007
PMID: 17996036
Bayesian coalescent inference of past population dynamics from molecular sequences.
Drummond AJ, Rambaut A, Shapiro B, Pybus OG., Mol. Biol. Evol. 22(5), 2005
PMID: 15703244
Drummond AJ, Rambaut A, Shapiro B, Pybus OG., Mol. Biol. Evol. 22(5), 2005
PMID: 15703244
Microsatellites: simple sequences with complex evolution.
Ellegren H., Nat. Rev. Genet. 5(6), 2004
PMID: 15153996
Ellegren H., Nat. Rev. Genet. 5(6), 2004
PMID: 15153996
Homoplasy and mutation model at microsatellite loci and their consequences for population genetics analysis.
Estoup A, Jarne P, Cornuet JM., Mol. Ecol. 11(9), 2002
PMID: 12207711
Estoup A, Jarne P, Cornuet JM., Mol. Ecol. 11(9), 2002
PMID: 12207711
Why hunter-gatherer populations do not show signs of Pleistocene demographic expansions
Excoffier, Proceedings of the National Academy of Sciences, USA 96(), 1999
Excoffier, Proceedings of the National Academy of Sciences, USA 96(), 1999
Using allele frequencies and geographic subdivision to reconstruct gene trees within a species: molecular variance parsimony.
Excoffier L, Smouse PE., Genetics 136(1), 1994
PMID: 8138170
Excoffier L, Smouse PE., Genetics 136(1), 1994
PMID: 8138170
Bayesian analysis of an admixture model with mutations and arbitrarily linked markers.
Excoffier L, Estoup A, Cornuet JM., Genetics 169(3), 2005
PMID: 15654099
Excoffier L, Estoup A, Cornuet JM., Genetics 169(3), 2005
PMID: 15654099
Statistical evaluation of alternative models of human evolution
Fagundes, Proceedings of the National Acadamy of Sciences, USA 104(), 2007
Fagundes, Proceedings of the National Acadamy of Sciences, USA 104(), 2007
Fanning, 1833
AUTHOR UNKNOWN, 0
Life history buffering in Antarctic mammals and birds against changing patterns of climate and environmental variation
FORCADA J, TRATHAN PN, MURPHY EJ., Global change biology. 14(11), 2008
PMID: IND44145277
FORCADA J, TRATHAN PN, MURPHY EJ., Global change biology. 14(11), 2008
PMID: IND44145277
Do population size bottlenecks reduce evolutionary potential?
Frankham, Animal Conservation 2(), 1999
Frankham, Animal Conservation 2(), 1999
Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection.
Fu YX., Genetics 147(2), 1997
PMID: 9335623
Fu YX., Genetics 147(2), 1997
PMID: 9335623
Detection of reduction in population size using data from microsatellite loci.
Garza JC, Williamson EG., Mol. Ecol. 10(2), 2001
PMID: 11298947
Garza JC, Williamson EG., Mol. Ecol. 10(2), 2001
PMID: 11298947
Interspecific microsatellite markers for the study of pinniped populations.
Gemmell NJ, Allen PJ, Goodman SJ, Reed JZ., Mol. Ecol. 6(7), 1997
PMID: 9226947
Gemmell NJ, Allen PJ, Goodman SJ, Reed JZ., Mol. Ecol. 6(7), 1997
PMID: 9226947
Variation in the mitochondrial control region in the Juan Fernandez fur seal (Arctocephalus philippii).
Goldsworthy S, Francis J, Boness D, Fleischer R., J. Hered. 91(5), 2000
PMID: 10994703
Goldsworthy S, Francis J, Boness D, Fleischer R., J. Hered. 91(5), 2000
PMID: 10994703
FSTAT (version 1.2): a computer program to calculate F-statistics
Goudet, Journal of Heredity 86(), 1995
Goudet, Journal of Heredity 86(), 1995
Evaluation of methodology for detection of genetic bottlenecks: inferences from temporally replicated lake trout populations
Guinand, Comptus Rendus Biologies 326(), 2003
Guinand, Comptus Rendus Biologies 326(), 2003
BioEdit: a user-friendly biological sequence alignment editor and analysis program for windows 95/98/NT
Hall, Nucleic Acids Symposium Series 41(), 1999
Hall, Nucleic Acids Symposium Series 41(), 1999
Signature of ancient population growth in a low-resolution mitochondrial DNA mismatch distribution.
Harpending HC., Hum. Biol. 66(4), 1994
PMID: 8088750
Harpending HC., Hum. Biol. 66(4), 1994
PMID: 8088750
Headland, 1989
Conservation Genetics: Techniques and Fundamentals.
Hedrick PW, Miller PS., Ecol Appl 2(1), 1992
PMID: 27759190
Hedrick PW, Miller PS., Ecol Appl 2(1), 1992
PMID: 27759190
Phylogenetic and familial estimates of mitochondrial substitution rates: study of control region mutations in deep-rooting pedigrees
Heyer, American Journal of Human Genetics 69(), 2001
Heyer, American Journal of Human Genetics 69(), 2001
Phylogeny and divergence of the pinnipeds (Carnivora: Mammalia) assessed using a multigene dataset.
Higdon JW, Bininda-Emonds OR, Beck RM, Ferguson SH., BMC Evol. Biol. 7(), 2007
PMID: 17996107
Higdon JW, Bininda-Emonds OR, Beck RM, Ferguson SH., BMC Evol. Biol. 7(), 2007
PMID: 17996107
Alpha-male paternity in elephant seals
Hoelzel, Behavioral Ecology and Sociobiology 46(), 1999
Hoelzel, Behavioral Ecology and Sociobiology 46(), 1999
A panel of new microsatellite loci for genetic studies of antarctic fur seals and other otariids
Hoffman JI., Conserv. Genet. 10(4), 2009
PMID: IND44221864
Hoffman JI., Conserv. Genet. 10(4), 2009
PMID: IND44221864
Microsatellite genotyping errors: detection approaches, common sources and consequences for paternal exclusion.
Hoffman JI, Amos W., Mol. Ecol. 14(2), 2005
PMID: 15660949
Hoffman JI, Amos W., Mol. Ecol. 14(2), 2005
PMID: 15660949
Male reproductive strategy and the importance of maternal status in the Antarctic fur seal Arctocephalus gazella.
Hoffman JI, Boyd IL, Amos W., Evolution 57(8), 2003
PMID: 14503632
Hoffman JI, Boyd IL, Amos W., Evolution 57(8), 2003
PMID: 14503632
Genetic tagging reveals extreme site fidelity in territorial male Antarctic fur seals Arctocephalus gazella.
Hoffman JI, Trathan PN, Amos W., Mol. Ecol. 15(12), 2006
PMID: 17032279
Hoffman JI, Trathan PN, Amos W., Mol. Ecol. 15(12), 2006
PMID: 17032279
Ten novel dinucleotide microsatellite loci cloned from the Galápagos sea lion (Zalophus californianus wollebaeki) are polymorphic in other pinniped species
Hoffman, Moleular Ecology Notes 7(), 2007
Hoffman, Moleular Ecology Notes 7(), 2007
PERMANENT GENETIC RESOURCES: Ten novel polymorphic dinucleotide microsatellite loci cloned from the Antarctic fur seal Arctocephalus gazella.
Hoffman JI, Dasmahapatra KK, Nichols HJ., Mol Ecol Resour 8(2), 2008
PMID: 21585821
Hoffman JI, Dasmahapatra KK, Nichols HJ., Mol Ecol Resour 8(2), 2008
PMID: 21585821
Contrasting patterns of genetic diversity at three different genetic markers in a marine mammal metapopulation.
Hoffman JI, Dasmahapatra KK, Amos W, Phillips CD, Gelatt TS, Bickham JW., Mol. Ecol. 18(14), 2009
PMID: 19500256
Hoffman JI, Dasmahapatra KK, Amos W, Phillips CD, Gelatt TS, Bickham JW., Mol. Ecol. 18(14), 2009
PMID: 19500256
Exploring the mechanisms underlying a heterozygosity-fitness correlation for canine size in the Antarctic fur seal Arctocephalus gazella.
Hoffman JI, Forcada J, Amos W., J. Hered. 101(5), 2010
PMID: 20457623
Hoffman JI, Forcada J, Amos W., J. Hered. 101(5), 2010
PMID: 20457623
Effects of recent population bottlenecks on reconstructing the demographic history of prairie-chickens.
Johnson JA, Dunn PO, Bouzat JL., Mol. Ecol. 16(11), 2007
PMID: 17561885
Johnson JA, Dunn PO, Bouzat JL., Mol. Ecol. 16(11), 2007
PMID: 17561885
Immigration and the ephemerality of a natural population bottleneck: evidence from molecular markers
Keller, Proceedings of the Royal Society of London Series B-Biological Sciences 268(), 2001
Keller, Proceedings of the Royal Society of London Series B-Biological Sciences 268(), 2001
Stepwise mutation model and distribution of allelic frequencies in a finite population.
Kimura M, Ohta T., Proc. Natl. Acad. Sci. U.S.A. 75(6), 1978
PMID: 275857
Kimura M, Ohta T., Proc. Natl. Acad. Sci. U.S.A. 75(6), 1978
PMID: 275857
Risk of population extinction from fixation of new deleterious mutations
Lande, Evolution 48(), 1994
Lande, Evolution 48(), 1994
AUTHOR UNKNOWN, 0
Empirical evaluation of a test for identifying recently bottlenecked populations from allele frequency data
Luikart, Conservation Biology 12(), 1998
Luikart, Conservation Biology 12(), 1998
Distortion of allele frequency distributions provides a test for recent population bottlenecks.
Luikart G, Allendorf FW, Cornuet JM, Sherwin WB., J. Hered. 89(3), 1998
PMID: 9656466
Luikart G, Allendorf FW, Cornuet JM, Sherwin WB., J. Hered. 89(3), 1998
PMID: 9656466
Temporal changes in allele frequencies provide estimates of population bottleneck size
Luikart, Conservation Biology 13(), 1999
Luikart, Conservation Biology 13(), 1999
Mutation accumulation and the extinction of small populations
Lynch, American Naturalist 146(), 1995
Lynch, American Naturalist 146(), 1995
Mill, 1905
Demographic consequences of inbreeding in remnant populations
Mills, American Naturalist 144(), 1994
Mills, American Naturalist 144(), 1994
Growth of a fur seal population
Payne, Philosophical Transactions of the Royal Society of London, B 279(), 1977
Payne, Philosophical Transactions of the Royal Society of London, B 279(), 1977
Distinguishing between population bottleneck and population subdivision by a Bayesian model choice procedure.
Peter BM, Wegmann D, Excoffier L., Mol. Ecol. 19(21), 2010
PMID: 20735743
Peter BM, Wegmann D, Excoffier L., Mol. Ecol. 19(21), 2010
PMID: 20735743
Assessing substitution patterns, rates and homoplasy at HVRI of Steller sea lions, Eumetopias jubatus.
Phillips CD, Trujillo RG, Gelatt TS, Smolen MJ, Matson CW, Honeycutt RL, Patton JC, Bickham JW., Mol. Ecol. 18(16), 2009
PMID: 19627492
Phillips CD, Trujillo RG, Gelatt TS, Smolen MJ, Matson CW, Honeycutt RL, Patton JC, Bickham JW., Mol. Ecol. 18(16), 2009
PMID: 19627492
BOTTLENECK: a computer program for detecting recent reductions in the effective population size using allele frequency data
Piry, Journal of Heredity 90(), 1999
Piry, Journal of Heredity 90(), 1999
Inference of population structure using multilocus genotype data.
Pritchard JK, Stephens M, Donnelly P., Genetics 155(2), 2000
PMID: 10835412
Pritchard JK, Stephens M, Donnelly P., Genetics 155(2), 2000
PMID: 10835412
R, 2005
Genepop (Version 1.2) - population genetics software for exact tests of ecumenicism
Raymond, Journal of Heredity 86(), 1995
Raymond, Journal of Heredity 86(), 1995
Temporal changes in allele frequencies and a population’s history of severe bottlenecks
Richards, Conservation Biology 10(), 1996
Richards, Conservation Biology 10(), 1996
Population growth makes waves in the distribution of pairwise genetic differences.
Rogers AR, Harpending H., Mol. Biol. Evol. 9(3), 1992
PMID: 1316531
Rogers AR, Harpending H., Mol. Biol. Evol. 9(3), 1992
PMID: 1316531
Evidence of a genetic bottleneck in an El Nino affected population of South American fur seals, Arctocephalus australis
Rosa, Journal of the Marine Biological Association of the United Kingdom 89(), 2009
Rosa, Journal of the Marine Biological Association of the United Kingdom 89(), 2009
High mutation rate of a long microsatellite allele in Drosophila melanogaster provides evidence for allele-specific mutation rates.
Schlotterer C, Ritter R, Harr B, Brem G., Mol. Biol. Evol. 15(10), 1998
PMID: 9787433
Schlotterer C, Ritter R, Harr B, Brem G., Mol. Biol. Evol. 15(10), 1998
PMID: 9787433
Schneider, 2000
Pairwise comparisons of mitochondrial DNA sequences in stable and exponentially growing populations.
Slatkin M, Hudson RR., Genetics 129(2), 1991
PMID: 1743491
Slatkin M, Hudson RR., Genetics 129(2), 1991
PMID: 1743491
Molecular evidence for historical and recent population size reductions of tiger salamanders (Ambystoma tigrinum) in Yellowstone National Park
Spear, Conservation Genetics 7(), 2006
Spear, Conservation Genetics 7(), 2006
Experimental evaluation of the usefulness of microsatellite DNA for detecting demographic bottlenecks.
Spencer CC, Neigel JE, Leberg PL., Mol. Ecol. 9(10), 2000
PMID: 11050547
Spencer CC, Neigel JE, Leberg PL., Mol. Ecol. 9(10), 2000
PMID: 11050547
A near-extinction event in lynx: do microsatellite data tell the tale?
Spong, Conservation Ecology 6(), 2002
Spong, Conservation Ecology 6(), 2002
High mitogenomic evolutionary rates and time dependency.
Subramanian S, Denver DR, Millar CD, Heupink T, Aschrafi A, Emslie SD, Baroni C, Lambert DM., Trends Genet. 25(11), 2009
PMID: 19836098
Subramanian S, Denver DR, Millar CD, Heupink T, Aschrafi A, Emslie SD, Baroni C, Lambert DM., Trends Genet. 25(11), 2009
PMID: 19836098
Statistical method for testing the neutral mutation hypothesis by DNA polymorphism.
Tajima F., Genetics 123(3), 1989
PMID: 2513255
Tajima F., Genetics 123(3), 1989
PMID: 2513255
A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping and DNA sequence data. III. Cladogram estimation.
Templeton AR, Crandall KA, Sing CF., Genetics 132(2), 1992
PMID: 1385266
Templeton AR, Crandall KA, Sing CF., Genetics 132(2), 1992
PMID: 1385266
Approximate Bayesian inference reveals evidence for a recent, severe bottleneck in a Netherlands population of Drosophila melanogaster.
Thornton K, Andolfatto P., Genetics 172(3), 2005
PMID: 16299396
Thornton K, Andolfatto P., Genetics 172(3), 2005
PMID: 16299396
Evaluating the effects of historic bottleneck events: an assessment of microsatellite variability in the endangered, North Atlantic right whale.
Waldick RC, Kraus S, Brown M, White BN., Mol. Ecol. 11(11), 2002
PMID: 12406236
Waldick RC, Kraus S, Brown M, White BN., Mol. Ecol. 11(11), 2002
PMID: 12406236
A generalized approach for estimating effective population size from temporal changes in allele frequency.
Waples RS., Genetics 121(2), 1989
PMID: 2731727
Waples RS., Genetics 121(2), 1989
PMID: 2731727
Mutation of human short tandem repeats.
Weber JL, Wong C., Hum. Mol. Genet. 2(8), 1993
PMID: 8401493
Weber JL, Wong C., Hum. Mol. Genet. 2(8), 1993
PMID: 8401493
Genetic consequences of a severe population bottleneck in the Guadalupe fur seal (Arctocephalus townsendi).
Weber DS, Stewart BS, Lehman N., J. Hered. 95(2), 2004
PMID: 15073230
Weber DS, Stewart BS, Lehman N., J. Hered. 95(2), 2004
PMID: 15073230
Weddell, 1825
Using maximum likelihood to estimate population size from temporal changes in allele frequencies.
Williamson EG, Slatkin M., Genetics 152(2), 1999
PMID: 10353915
Williamson EG, Slatkin M., Genetics 152(2), 1999
PMID: 10353915
Comparison of methods for detecting bottlenecks from microsatellite loci
Williamson-Natesan EG., Conserv. Genet. 6(4), 2005
PMID: IND43971996
Williamson-Natesan EG., Conserv. Genet. 6(4), 2005
PMID: IND43971996
Mitochondrial DNA and two perspectives on evolutionary genetics
Wilson, Biological Journal of the Linnean Sociey 26(), 1985
Wilson, Biological Journal of the Linnean Sociey 26(), 1985
Postsealing genetic variation and population structure of two species of fur seal (Arctocephalus gazella and A. tropicalis).
Wynen LP, Goldsworthy SD, Guinet C, Bester MN, Boyd IL, Gjertz I, Hofmeyr GJ, White RW, Slade R., Mol. Ecol. 9(3), 2000
PMID: 10736028
Wynen LP, Goldsworthy SD, Guinet C, Bester MN, Boyd IL, Gjertz I, Hofmeyr GJ, White RW, Slade R., Mol. Ecol. 9(3), 2000
PMID: 10736028
Export
Markieren/ Markierung löschen
Markierte Publikationen
Web of Science
Dieser Datensatz im Web of Science®Quellen
PMID: 21895820
PubMed | Europe PMC
Suchen in