cDNA sequence, genomic organization and differential expression of three Arabidopsis genes for germin oxalate oxidase-like proteins

Membre N, Berna A, Neutelings G, David A, David H, Staiger D, Vasquez JS, Raynal M, Delseny M, Bernier F (1997)
Plant Molecular Biology 35(4): 459-469.

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Zeitschriftenaufsatz | Veröffentlicht | Englisch
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Abstract / Bemerkung
Wheat germin is a protein expressed during germination which possesses an oxalate oxidase activity. Germin-type oxalate oxidases have been extensively studied in monocotyledons (wheat and barley) where they are thought to have important functions for development, stress response and defence against pathogens. In contrast, almost nothing is known about the germin-like proteins found in dicotyledons, gymnosperms and myxomycetes. In this work, cDNA clones for three genes (ATGER1, ATGER2 and ATGER3) encoding germin-like proteins, initially characterized as expressed sequence tags (ESTs), from Arabidopsis thaliana cDNA libraries were further characterized. In addition, we isolated and sequenced a Brassica napus cDNA which was strongly homologous to the cDNA for ATGER1. Sequence analysis and secondary structure predictions of the proteins encoded by these cDNAs showed that they possess all the characteristic features of members of the germin family and of the germin/seed globulins/sucrose binding protein superfamily. Sequence comparisons and mapping demonstrated the existence of at least two different gene families in the A. thaliana genome encoding a minimum of three genes for germins. These three genes have been mapped in three different location on the Arabidopsis genome. By northern blot hybridizations we found that these genes are differentially regulated. ATGER1 was expressed during germination, like wheat germin, but also in leaves whereas ATGER2 transcripts were exclusively found in developing embryos, like wheat pseudo-germin. ATGER3 mRNAs were found in leaves and flowers and their abundance was shown to vary during the circadian cycle.
Erscheinungsjahr
Zeitschriftentitel
Plant Molecular Biology
Band
35
Ausgabe
4
Seite(n)
459-469
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PUB-ID

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Membre N, Berna A, Neutelings G, et al. cDNA sequence, genomic organization and differential expression of three Arabidopsis genes for germin oxalate oxidase-like proteins. Plant Molecular Biology. 1997;35(4):459-469.
Membre, N., Berna, A., Neutelings, G., David, A., David, H., Staiger, D., Vasquez, J. S., et al. (1997). cDNA sequence, genomic organization and differential expression of three Arabidopsis genes for germin oxalate oxidase-like proteins. Plant Molecular Biology, 35(4), 459-469. doi:10.1023/A:1005833028582
Membre, N., Berna, A., Neutelings, G., David, A., David, H., Staiger, D., Vasquez, J. S., Raynal, M., Delseny, M., and Bernier, F. (1997). cDNA sequence, genomic organization and differential expression of three Arabidopsis genes for germin oxalate oxidase-like proteins. Plant Molecular Biology 35, 459-469.
Membre, N., et al., 1997. cDNA sequence, genomic organization and differential expression of three Arabidopsis genes for germin oxalate oxidase-like proteins. Plant Molecular Biology, 35(4), p 459-469.
N. Membre, et al., “cDNA sequence, genomic organization and differential expression of three Arabidopsis genes for germin oxalate oxidase-like proteins”, Plant Molecular Biology, vol. 35, 1997, pp. 459-469.
Membre, N., Berna, A., Neutelings, G., David, A., David, H., Staiger, D., Vasquez, J.S., Raynal, M., Delseny, M., Bernier, F.: cDNA sequence, genomic organization and differential expression of three Arabidopsis genes for germin oxalate oxidase-like proteins. Plant Molecular Biology. 35, 459-469 (1997).
Membre, Nathalie, Berna, Anne, Neutelings, Godfrey, David, Alain, David, Helene, Staiger, Dorothee, Vasquez, Julio Saez, Raynal, Monique, Delseny, Michel, and Bernier, Francois. “cDNA sequence, genomic organization and differential expression of three Arabidopsis genes for germin oxalate oxidase-like proteins”. Plant Molecular Biology 35.4 (1997): 459-469.

32 Zitationen in Europe PMC

Daten bereitgestellt von Europe PubMed Central.

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Mauri N, Fernández-Marcos M, Costas C, Desvoyes B, Pichel A, Caro E, Gutierrez C., Sci Rep 6(), 2016
PMID: 26939893
Versatility of germin-like proteins in their sequences, expressions, and functions.
Barman AR, Banerjee J., Funct Integr Genomics 15(5), 2015
PMID: 26174051
A proteomic study on molecular mechanism of poor grain-filling of rice (Oryza sativa L.) inferior spikelets.
Zhang Z, Zhao H, Tang J, Li Z, Li Z, Chen D, Lin W., PLoS One 9(2), 2014
PMID: 24586550
A comprehensive analysis of the Cupin gene family in soybean (Glycine max).
Wang X, Zhang H, Gao Y, Sun G, Zhang W, Qiu L., PLoS One 9(10), 2014
PMID: 25360675
Localization of tobacco germin-like protein 1 in leaf intercellular space.
Kishi-Kaboshi M, Muto H, Takeda A, Murata T, Hasebe M, Watanabe Y., Plant Physiol Biochem 85(), 2014
PMID: 25394794
A previously unknown oxalyl-CoA synthetase is important for oxalate catabolism in Arabidopsis.
Foster J, Kim HU, Nakata PA, Browse J., Plant Cell 24(3), 2012
PMID: 22447686
The complex contribution of NOS interneurons in the physiology of cerebrovascular regulation.
Duchemin S, Boily M, Sadekova N, Girouard H., Front Neural Circuits 6(), 2012
PMID: 22907993
Differential transcriptional expression following thidiazuron-induced callus differentiation developmental shifts in rice.
Chakrabarty D, Trivedi PK, Shri M, Misra P, Asif MH, Dubey S, Kumar S, Rai A, Tiwari M, Shukla D, Pandey A, Nigam D, Tripathi RD, Tuli R., Plant Biol (Stuttg) 12(1), 2010
PMID: 20653887
Regulation of two germin-like protein genes during plum fruit development.
El-Sharkawy I, Mila I, Bouzayen M, Jayasankar S., J Exp Bot 61(6), 2010
PMID: 20202999
Identification and analysis of the germin-like gene family in soybean.
Lu M, Han YP, Gao JG, Wang XJ, Li WB., BMC Genomics 11(), 2010
PMID: 21059215
Molecular aspects of somatic-to-embryogenic transition in plants.
Karami O, Aghavaisi B, Mahmoudi Pour A., J Chem Biol 2(4), 2009
PMID: 19763658
Germin-like genes are expressed during somatic embryogenesis and early development of conifers.
Mathieu M, Lelu-Walter MA, Blervacq AS, David H, Hawkins S, Neutelings G., Plant Mol Biol 61(4-5), 2006
PMID: 16897479
A gene encoding a germin-like protein, identified by a cDNA-AFLP approach, is specifically expressed during germination of Phaseolus vulgaris.
Aubry C, Morère-Le Paven MC, Chateigner-Boutin AL, Teulat-Merah B, Ricoult C, Peltier D, Jalouzot R, Limami AM., Planta 217(3), 2003
PMID: 14520574
Physical and genetic mapping of barley (Hordeum vulgare) germin-like cDNAs.
Druka A, Kudrna D, Kannangara CG, von Wettstein D, Kleinhofs A., Proc Natl Acad Sci U S A 99(2), 2002
PMID: 11792854
Allergologic exploration of germins and germin-like proteins, a new class of plant allergens.
Jensen-Jarolim E, Schmid B, Bernier F, Berna A, Kinaciyan T, Focke M, Ebner C, Scheiner O, Boltz-Nitulescu G., Allergy 57(9), 2002
PMID: 12169176
RNA-binding proteins and circadian rhythms in Arabidopsis thaliana.
Staiger D., Philos Trans R Soc Lond B Biol Sci 356(1415), 2001
PMID: 11710982
Extensive duplication and reshuffling in the Arabidopsis genome.
Blanc G, Barakat A, Guyot R, Cooke R, Delseny M., Plant Cell 12(7), 2000
PMID: 10899976
Functional characterization of seed coat-specific members of the barley germin gene family.
Wu S, Druka A, Horvath H, Kleinhofs A, Gamini Kannangara C, von Wettstein D., Plant Physiol Biochem 38(9), 2000
PMID: C6791
Nectarin I is a novel, soluble germin-like protein expressed in the nectar of Nicotiana sp.
Carter C, Graham RA, Thornburg RW., Plant Mol Biol 41(2), 1999
PMID: 10579488
Barley oxalate oxidase is a hexameric protein related to seed storage proteins: evidence from X-ray crystallography.
Woo EJ, Dunwell JM, Goodenough PW, Pickersgill RW., FEBS Lett 437(1-2), 1998
PMID: 9804177
Characterization of a germin-like protein gene expressed in somatic and zygotic embryos of pine (Pinus caribaea Morelet).
Neutelings G, Domon JM, Membré N, Bernier F, Meyer Y, David A, David H., Plant Mol Biol 38(6), 1998
PMID: 9869423

35 References

Daten bereitgestellt von Europe PubMed Central.

Duplication of CaMV 35S Promoter Sequences Creates a Strong Enhancer for Plant Genes.
Kay R, Chan A, Daly M, McPherson J., Science 236(4806), 1987
PMID: 17770331
Disease resistance conferred by expression of a gene encoding H2O2-generating glucose oxidase in transgenic potato plants.
Wu G, Shortt BJ, Lawrence EB, Levine EB, Fitzsimmons KC, Shah DM., Plant Cell 7(9), 1995
PMID: 8589621
Legumin-like and vicilin-like seed storage proteins: evidence for a common single-domain ancestral gene.
Shutov AD, Kakhovskaya IA, Braun H, Baumlein H, Muntz K., J. Mol. Evol. 41(6), 1995
PMID: 8587104
Homologies between members of the germin gene family in hexaploid wheat and similarities between these wheat germins and certain Physarum spherulins.
Lane BG, Bernier F, Dratewka-Kos E, Shafai R, Kennedy TD, Pyne C, Munro JR, Vaughan T, Walters D, Altomare F., J. Biol. Chem. 266(16), 1991
PMID: 2037593
Structure and function of plant cell wall proteins.
Showalter AM., Plant Cell 5(1), 1993
PMID: 8439747
The three-dimensional structure of canavalin from jack bean (Canavalia ensiformis).
Ko TP, Ng JD, McPherson A., Plant Physiol. 101(3), 1993
PMID: 8310056
Identification of barley oxalate oxidase as a germin-like protein.
Dumas B, Sailland A, Cheviet JP, Freyssinet G, Pallett K., C. R. Acad. Sci. III, Sci. Vie 316(8), 1993
PMID: 8044704
Further progress towards a catalogue of all Arabidopsis genes: analysis of a set of 5000 non-redundant ESTs.
Cooke R, Raynal M, Laudie M, Grellet F, Delseny M, Morris PC, Guerrier D, Giraudat J, Quigley F, Clabault G, Li YF, Mache R, Krivitzky M, Gy IJ, Kreis M, Lecharny A, Parmentier Y, Marbach J, Fleck J, Clement B, Philipps G, Herve C, Bardet C, Tremousaygue D, Hofte H., Plant J. 9(1), 1996
PMID: 8580968
Effect of Salt Stress on Germin Gene Expression in Barley Roots.
Hurkman WJ, Tanaka CK., Plant Physiol. 110(3), 1996
PMID: 12226234
Seed storage proteins of spermatophytes share a common ancestor with desiccation proteins of fungi.
Baumlein H, Braun H, Kakhovskaya IA, Shutov AD., J. Mol. Evol. 41(6), 1995
PMID: 8587105
Patterns of amino acids near signal-sequence cleavage sites.
von Heijne G., Eur. J. Biochem. 133(1), 1983
PMID: 6852022
Active Oxygen Species in Plant Defense against Pathogens.
Mehdy MC., Plant Physiol. 105(2), 1994
PMID: 12232215
Germin Gene Expression Is Induced in Wheat Leaves by Powdery Mildew Infection.
Hurkman WJ, Tanaka CK., Plant Physiol. 111(3), 1996
PMID: 12226325
A vicilin-like seed protein of cycads: similarity to sucrose-binding proteins.
Braun H, Czihal A, Shutov AD, Baumlein H., Plant Mol. Biol. 31(1), 1996
PMID: 8704157
An inventory of 1152 expressed sequence tags obtained by partial sequencing of cDNAs from Arabidopsis thaliana.
Hofte H, Desprez T, Amselem J, Chiapello H, Rouze P, Caboche M, Moisan A, Jourjon MF, Charpenteau JL, Berthomieu P., Plant J. 4(6), 1993
PMID: 8281187
Germin-Like Polypeptides Increase in Barley Roots during Salt Stress.
Hurkman WJ, Tao HP, Tanaka CK., Plant Physiol. 97(1), 1991
PMID: 16668394
Germin, a protein marker of early plant development, is an oxalate oxidase.
Lane BG, Dunwell JM, Ray JA, Schmitt MR, Cuming AC., J. Biol. Chem. 268(17), 1993
PMID: 8509360
The CIC library: a large insert YAC library for genome mapping in Arabidopsis thaliana.
Creusot F, Fouilloux E, Dron M, Lafleuriel J, Picard G, Billault A, Le Paslier D, Cohen D, Chaboute ME, Durr A., Plant J. 8(5), 1995
PMID: 8528287

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