Crystal structure of human pFGE, the paralog of the C alpha-formylglycine-generating enzyme
Dickmanns A, Schmidt B, Rudolph MG, Mariappan M, Dierks T, Figura von K, Ficner R (2005)
JOURNAL OF BIOLOGICAL CHEMISTRY 280(15): 15180-15187.
Zeitschriftenaufsatz
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Autor*in
Dickmanns, A;
Schmidt, B;
Rudolph, MG;
Mariappan, M;
Dierks, ThomasUniBi;
Figura von, K;
Ficner, R
Einrichtung
Abstract / Bemerkung
In eukaryotes, sulfate esters are degraded by sulfatases, which possess a unique C alpha-formylglycine residue in their active site. The defect in post-translational formation of the C alpha-formylglycine residue causes a severe lysosomal storage disorder in humans. Recently, FGE (formylglycine-generating enzyme) has been identified as the protein required for this specific modification. Using sequence comparisons, a protein homologous to FGE was found and denoted pFGE (paralog of FGE). pFGE binds a sulfatase-derived peptide bearing the FGE recognition motif, but it lacks formylglycine-generating activity. Both proteins belong to a large family of pro- and eukaryotic proteins containing the DUF323 domain, a formylglycine-generating enzyme domain of unknown three-dimensional structure. We have crystallized the glycosylated human pFGE and determined its crystal structure at a resolution of 1.86 angstrom. The structure reveals a novel fold, which we denote the FGE fold and which therefore serves as a paradigm for the DUF323 domain. It is characterized by an asymmetric partitioning of secondary structure elements and is stabilized by two calcium cations. A deep cleft on the surface of pFGE most likely represents the sulfatase polypeptide binding site. The asymmetric unit of the pFGE crystal contains a homodimer. The putative peptide binding site is buried between the monomers, indicating a biological significance of the dimer. The structure suggests the capability of pFGE to form a heterodimer with FGE.
Erscheinungsjahr
2005
Zeitschriftentitel
JOURNAL OF BIOLOGICAL CHEMISTRY
Band
280
Ausgabe
15
Seite(n)
15180-15187
ISSN
0021-9258
eISSN
1083-351X
Page URI
https://pub.uni-bielefeld.de/record/2350723
Zitieren
Dickmanns A, Schmidt B, Rudolph MG, et al. Crystal structure of human pFGE, the paralog of the C alpha-formylglycine-generating enzyme. JOURNAL OF BIOLOGICAL CHEMISTRY. 2005;280(15):15180-15187.
Dickmanns, A., Schmidt, B., Rudolph, M. G., Mariappan, M., Dierks, T., Figura von, K., & Ficner, R. (2005). Crystal structure of human pFGE, the paralog of the C alpha-formylglycine-generating enzyme. JOURNAL OF BIOLOGICAL CHEMISTRY, 280(15), 15180-15187. https://doi.org/10.1074/jbc.M414317200
Dickmanns, A, Schmidt, B, Rudolph, MG, Mariappan, M, Dierks, Thomas, Figura von, K, and Ficner, R. 2005. “Crystal structure of human pFGE, the paralog of the C alpha-formylglycine-generating enzyme”. JOURNAL OF BIOLOGICAL CHEMISTRY 280 (15): 15180-15187.
Dickmanns, A., Schmidt, B., Rudolph, M. G., Mariappan, M., Dierks, T., Figura von, K., and Ficner, R. (2005). Crystal structure of human pFGE, the paralog of the C alpha-formylglycine-generating enzyme. JOURNAL OF BIOLOGICAL CHEMISTRY 280, 15180-15187.
Dickmanns, A., et al., 2005. Crystal structure of human pFGE, the paralog of the C alpha-formylglycine-generating enzyme. JOURNAL OF BIOLOGICAL CHEMISTRY, 280(15), p 15180-15187.
A. Dickmanns, et al., “Crystal structure of human pFGE, the paralog of the C alpha-formylglycine-generating enzyme”, JOURNAL OF BIOLOGICAL CHEMISTRY, vol. 280, 2005, pp. 15180-15187.
Dickmanns, A., Schmidt, B., Rudolph, M.G., Mariappan, M., Dierks, T., Figura von, K., Ficner, R.: Crystal structure of human pFGE, the paralog of the C alpha-formylglycine-generating enzyme. JOURNAL OF BIOLOGICAL CHEMISTRY. 280, 15180-15187 (2005).
Dickmanns, A, Schmidt, B, Rudolph, MG, Mariappan, M, Dierks, Thomas, Figura von, K, and Ficner, R. “Crystal structure of human pFGE, the paralog of the C alpha-formylglycine-generating enzyme”. JOURNAL OF BIOLOGICAL CHEMISTRY 280.15 (2005): 15180-15187.
Daten bereitgestellt von European Bioinformatics Institute (EBI)
UNIPROT
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PDB
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x-ray diffraction (PDB: 1y4j)
Protein structure name: crystal structure of the paralogue of the human formylglycine generating enzyme
Public wwPDB file in PDB format
Protein structure name: crystal structure of the paralogue of the human formylglycine generating enzyme
Public wwPDB file in PDB format
INTERPRO
1 Eintrag gefunden, die diesen Artikel zitieren
12 Zitationen in Europe PMC
Daten bereitgestellt von Europe PubMed Central.
Sulfatase modifying factor 1 (SUMF1) is associated with Chronic Obstructive Pulmonary Disease.
Weidner J, Jarenbäck L, de Jong K, Vonk JM, van den Berge M, Brandsma CA, Boezen HM, Sin D, Bossé Y, Nickle D, Ankerst J, Bjermer L, Postma DS, Faiz A, Tufvesson E., Respir Res 18(1), 2017
PMID: 28464818
Weidner J, Jarenbäck L, de Jong K, Vonk JM, van den Berge M, Brandsma CA, Boezen HM, Sin D, Bossé Y, Nickle D, Ankerst J, Bjermer L, Postma DS, Faiz A, Tufvesson E., Respir Res 18(1), 2017
PMID: 28464818
Sulfatase activities are regulated by the interaction of the sulfatase-modifying factor 1 with SUMF2.
Zito E, Fraldi A, Pepe S, Annunziata I, Kobinger G, Di Natale P, Ballabio A, Cosma MP., EMBO Rep 17(12), 2016
PMID: 27909074
Zito E, Fraldi A, Pepe S, Annunziata I, Kobinger G, Di Natale P, Ballabio A, Cosma MP., EMBO Rep 17(12), 2016
PMID: 27909074
Formylglycine, a post-translationally generated residue with unique catalytic capabilities and biotechnology applications.
Appel MJ, Bertozzi CR., ACS Chem Biol 10(1), 2015
PMID: 25514000
Appel MJ, Bertozzi CR., ACS Chem Biol 10(1), 2015
PMID: 25514000
Downregulation of SUMF2 gene in ovalbumin-induced rat model of allergic inflammation.
Fang C, Li X, Liang H, Xue L, Liu L, Yang C, Gao G, Jiang X., Int J Clin Exp Pathol 8(10), 2015
PMID: 26722390
Fang C, Li X, Liang H, Xue L, Liu L, Yang C, Gao G, Jiang X., Int J Clin Exp Pathol 8(10), 2015
PMID: 26722390
Paralog of the formylglycine-generating enzyme--retention in the endoplasmic reticulum by canonical and noncanonical signals.
Gande SL, Mariappan M, Schmidt B, Pringle TH, von Figura K, Dierks T., FEBS J 275(6), 2008
PMID: 18266766
Gande SL, Mariappan M, Schmidt B, Pringle TH, von Figura K, Dierks T., FEBS J 275(6), 2008
PMID: 18266766
Function and structure of a prokaryotic formylglycine-generating enzyme.
Carlson BL, Ballister ER, Skordalakes E, King DS, Breidenbach MA, Gilmore SA, Berger JM, Bertozzi CR., J Biol Chem 283(29), 2008
PMID: 18390551
Carlson BL, Ballister ER, Skordalakes E, King DS, Breidenbach MA, Gilmore SA, Berger JM, Bertozzi CR., J Biol Chem 283(29), 2008
PMID: 18390551
Sulfotransferases, sulfatases and formylglycine-generating enzymes: a sulfation fascination.
Bojarová P, Williams SJ., Curr Opin Chem Biol 12(5), 2008
PMID: 18625336
Bojarová P, Williams SJ., Curr Opin Chem Biol 12(5), 2008
PMID: 18625336
A general binding mechanism for all human sulfatases by the formylglycine-generating enzyme.
Roeser D, Preusser-Kunze A, Schmidt B, Gasow K, Wittmann JG, Dierks T, von Figura K, Rudolph MG., Proc Natl Acad Sci U S A 103(1), 2006
PMID: 16368756
Roeser D, Preusser-Kunze A, Schmidt B, Gasow K, Wittmann JG, Dierks T, von Figura K, Rudolph MG., Proc Natl Acad Sci U S A 103(1), 2006
PMID: 16368756
Molecular cloning and initial characterization of three novel human sulfatases.
Obaya AJ., Gene 372(), 2006
PMID: 16500042
Obaya AJ., Gene 372(), 2006
PMID: 16500042
Sulfatases and human disease.
Diez-Roux G, Ballabio A., Annu Rev Genomics Hum Genet 6(), 2005
PMID: 16124866
Diez-Roux G, Ballabio A., Annu Rev Genomics Hum Genet 6(), 2005
PMID: 16124866
Molecular basis for multiple sulfatase deficiency and mechanism for formylglycine generation of the human formylglycine-generating enzyme.
Dierks T, Dickmanns A, Preusser-Kunze A, Schmidt B, Mariappan M, von Figura K, Ficner R, Rudolph MG., Cell 121(4), 2005
PMID: 15907468
Dierks T, Dickmanns A, Preusser-Kunze A, Schmidt B, Mariappan M, von Figura K, Ficner R, Rudolph MG., Cell 121(4), 2005
PMID: 15907468
Diversity in domain architectures of Ser/Thr kinases and their homologues in prokaryotes.
Krupa A, Srinivasan N., BMC Genomics 6(), 2005
PMID: 16171520
Krupa A, Srinivasan N., BMC Genomics 6(), 2005
PMID: 16171520
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