Dead-time free measurement of dipole-dipole interactions between electron spins

Pannier M, Veit S, Godt A, Jeschke G, Spiess HW (2000)
JOURNAL OF MAGNETIC RESONANCE 142(2): 331-340.

Zeitschriftenaufsatz | Veröffentlicht | Englisch
 
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DOI
Autor*in
Pannier, M; Veit, S; Godt, AdelheidUniBi; Jeschke, G; Spiess, HW
Einrichtung
Fakultät für Chemie > Organische und Makromolekulare Chemie
Erscheinungsjahr
2000
Zeitschriftentitel
JOURNAL OF MAGNETIC RESONANCE
Band
142
Ausgabe
2
Seite(n)
331-340
ISSN
1090-7807
Page URI
https://pub.uni-bielefeld.de/record/2345643

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Pannier M, Veit S, Godt A, Jeschke G, Spiess HW. Dead-time free measurement of dipole-dipole interactions between electron spins. JOURNAL OF MAGNETIC RESONANCE. 2000;142(2):331-340.
Pannier, M., Veit, S., Godt, A., Jeschke, G., & Spiess, H. W. (2000). Dead-time free measurement of dipole-dipole interactions between electron spins. JOURNAL OF MAGNETIC RESONANCE, 142(2), 331-340. https://doi.org/10.1006/jmre.1999.1944
Pannier, M, Veit, S, Godt, Adelheid, Jeschke, G, and Spiess, HW. 2000. “Dead-time free measurement of dipole-dipole interactions between electron spins”. JOURNAL OF MAGNETIC RESONANCE 142 (2): 331-340.
Pannier, M., Veit, S., Godt, A., Jeschke, G., and Spiess, H. W. (2000). Dead-time free measurement of dipole-dipole interactions between electron spins. JOURNAL OF MAGNETIC RESONANCE 142, 331-340.
Pannier, M., et al., 2000. Dead-time free measurement of dipole-dipole interactions between electron spins. JOURNAL OF MAGNETIC RESONANCE, 142(2), p 331-340.
M. Pannier, et al., “Dead-time free measurement of dipole-dipole interactions between electron spins”, JOURNAL OF MAGNETIC RESONANCE, vol. 142, 2000, pp. 331-340.
Pannier, M., Veit, S., Godt, A., Jeschke, G., Spiess, H.W.: Dead-time free measurement of dipole-dipole interactions between electron spins. JOURNAL OF MAGNETIC RESONANCE. 142, 331-340 (2000).
Pannier, M, Veit, S, Godt, Adelheid, Jeschke, G, and Spiess, HW. “Dead-time free measurement of dipole-dipole interactions between electron spins”. JOURNAL OF MAGNETIC RESONANCE 142.2 (2000): 331-340.

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PMID: 27711532
Averaging of nuclear modulation artefacts in RIDME experiments.
Keller K, Doll A, Qi M, Godt A, Jeschke G, Yulikov M., J Magn Reson 272(), 2016
PMID: 27684788
Interaction of triarylmethyl radicals with DNA termini revealed by orientation-selective W-band double electron-electron resonance spectroscopy.
Fedin MV, Shevelev GY, Pyshnyi DV, Tormyshev VM, Jeschke G, Yulikov M, Bagryanskaya EG., Phys Chem Chem Phys 18(42), 2016
PMID: 27748488
CIDME: Short distances measured with long chirp pulses.
Doll A, Qi M, Godt A, Jeschke G., J Magn Reson 273(), 2016
PMID: 27788378
RIDME spectroscopy on high-spin Mn2+ centers.
Akhmetzyanov D, Ching HY, Denysenkov V, Demay-Drouhard P, Bertrand HC, Tabares LC, Policar C, Prisner TF, Un S., Phys Chem Chem Phys 18(44), 2016
PMID: 27801444
Allosteric Signaling Is Bidirectional in an Outer-Membrane Transport Protein.
Sikora A, Joseph B, Matson M, Staley JR, Cafiso DS., Biophys J 111(9), 2016
PMID: 27806272
Long Distance Measurements up to 160 Å in the GroEL Tetradecamer Using Q-Band DEER EPR Spectroscopy.
Schmidt T, Wälti MA, Baber JL, Hustedt EJ, Clore GM., Angew Chem Int Ed Engl 55(51), 2016
PMID: 27860003
Exploiting the Symmetry of the Resonator Mode to Enhance PELDOR Sensitivity.
Salvadori E, Fung MW, Hoffmann M, Anderson HL, Kay CW., Appl Magn Reson 46(4), 2015
PMID: 25798030
Conformational dynamics of nucleic acid molecules studied by PELDOR spectroscopy with rigid spin labels.
Prisner TF, Marko A, Sigurdsson ST., J Magn Reson 252(), 2015
PMID: 25701439
Pulse dipolar ESR of doubly labeled mini TAR DNA and its annealing to mini TAR RNA.
Sun Y, Borbat PP, Grigoryants VM, Myers WK, Freed JH, Scholes CP., Biophys J 108(4), 2015
PMID: 25692594
Assessing dimerisation degree and cooperativity in a biomimetic small-molecule model by pulsed EPR.
Ackermann K, Giannoulis A, Cordes DB, Slawin AM, Bode BE., Chem Commun (Camb) 51(25), 2015
PMID: 25587579
Pulsed electron-electron double resonance spectroscopy between a high-spin Mn(2+) ion and a nitroxide spin label.
Akhmetzyanov D, Plackmeyer J, Endeward B, Denysenkov V, Prisner TF., Phys Chem Chem Phys 17(10), 2015
PMID: 25669744
Sensitivity enhancement by population transfer in Gd(III) spin labels.
Doll A, Qi M, Pribitzer S, Wili N, Yulikov M, Godt A, Jeschke G., Phys Chem Chem Phys 17(11), 2015
PMID: 25697259
Room-temperature distance measurements of immobilized spin-labeled protein by DEER/PELDOR.
Meyer V, Swanson MA, Clouston LJ, Boratyński PJ, Stein RA, Mchaourab HS, Rajca A, Eaton SS, Eaton GR., Biophys J 108(5), 2015
PMID: 25762332
Structural mechanism for the regulation of HCN ion channels by the accessory protein TRIP8b.
DeBerg HA, Bankston JR, Rosenbaum JC, Brzovic PS, Zagotta WN, Stoll S., Structure 23(4), 2015
PMID: 25800552
EPR and NMR spectroscopies provide input on the coordination of Cu(I) and Ag(I) to a disordered methionine segment.
Shenberger Y, Gottlieb HE, Ruthstein S., J Biol Inorg Chem 20(4), 2015
PMID: 25822808
EPR spectroscopy identifies Met and Lys residues that are essential for the interaction between the CusB N-terminal domain and metallochaperone CusF.
Meir A, Natan A, Moskovitz Y, Ruthstein S., Metallomics 7(7), 2015
PMID: 25940871
Conformational Changes Underlying Desensitization of the Pentameric Ligand-Gated Ion Channel ELIC.
Kinde MN, Chen Q, Lawless MJ, Mowrey DD, Xu J, Saxena S, Xu Y, Tang P., Structure 23(6), 2015
PMID: 25960405
Probing the Solution Structure of IκB Kinase (IKK) Subunit γ and Its Interaction with Kaposi Sarcoma-associated Herpes Virus Flice-interacting Protein and IKK Subunit β by EPR Spectroscopy.
Bagnéris C, Rogala KB, Baratchian M, Zamfir V, Kunze MB, Dagless S, Pirker KF, Collins MK, Hall BA, Barrett TE, Kay CW., J Biol Chem 290(27), 2015
PMID: 25979343
Exploring intrinsically disordered proteins using site-directed spin labeling electron paramagnetic resonance spectroscopy.
Le Breton N, Martinho M, Mileo E, Etienne E, Gerbaud G, Guigliarelli B, Belle V., Front Mol Biosci 2(), 2015
PMID: 26042221
A simple double quantum coherence ESR sequence that minimizes nuclear modulations in Cu(2+)-ion based distance measurements.
Ruthstein S, Ji M, Shin BK, Saxena S., J Magn Reson 257(), 2015
PMID: 26057636
Distance measurements between manganese(II) and nitroxide spin-labels by DEER determine a binding site of Mn(2+) in the HP92 loop of ribosomal RNA.
Kaminker I, Bye M, Mendelman N, Gislason K, Sigurdsson ST, Goldfarb D., Phys Chem Chem Phys 17(23), 2015
PMID: 25994415
Multiple scale investigation of molecular diffusion inside functionalized porous hosts using a combination of magnetic resonance methods.
Wessig M, Spitzbarth M, Drescher M, Winter R, Polarz S., Phys Chem Chem Phys 17(24), 2015
PMID: 26027653
Triarylmethyl Labels: Toward Improving the Accuracy of EPR Nanoscale Distance Measurements in DNAs.
Shevelev GY, Krumkacheva OA, Lomzov AA, Kuzhelev AA, Trukhin DV, Rogozhnikova OY, Tormyshev VM, Pyshnyi DV, Fedin MV, Bagryanskaya EG., J Phys Chem B 119(43), 2015
PMID: 26011022
Shape Persistence of Polyproline II Helical Oligoprolines.
Garbuio L, Lewandowski B, Wilhelm P, Ziegler L, Yulikov M, Wennemers H, Jeschke G., Chemistry 21(30), 2015
PMID: 26089127
Gd(III)-Gd(III) EPR distance measurements--the range of accessible distances and the impact of zero field splitting.
Dalaloyan A, Qi M, Ruthstein S, Vega S, Godt A, Feintuch A, Goldfarb D., Phys Chem Chem Phys 17(28), 2015
PMID: 26108866
Characterizing rhodopsin signaling by EPR spectroscopy: from structure to dynamics.
Van Eps N, Caro LN, Morizumi T, Ernst OP., Photochem Photobiol Sci 14(9), 2015
PMID: 26140679
Mechanism of influenza A M2 transmembrane domain assembly in lipid membranes.
Georgieva ER, Borbat PP, Norman HD, Freed JH., Sci Rep 5(), 2015
PMID: 26190831
Pulsed EPR spectroscopy distance measurements of DNA internally labelled with Gd(3+)-DOTA.
Wojciechowski F, Groß A, Holder IT, Knörr L, Drescher M, Hartig JS., Chem Commun (Camb) 51(72), 2015
PMID: 26236790
An Integrated Spin-Labeling/Computational-Modeling Approach for Mapping Global Structures of Nucleic Acids.
Tangprasertchai NS, Zhang X, Ding Y, Tham K, Rohs R, Haworth IS, Qin PZ., Methods Enzymol 564(), 2015
PMID: 26477260
Gd(III) complexes for electron-electron dipolar spectroscopy: Effects of deuteration, pH and zero field splitting.
Garbuio L, Zimmermann K, Häussinger D, Yulikov M., J Magn Reson 259(), 2015
PMID: 26342680
Conformational heterogeneity of the Roc domains in C. tepidum Roc-COR and implications for human LRRK2 Parkinson mutations.
Rudi K, Ho FY, Gilsbach BK, Pots H, Wittinghofer A, Kortholt A, Klare JP., Biosci Rep 35(5), 2015
PMID: 26310572
Modeling of the N-terminal Section and the Lumenal Loop of Trimeric Light Harvesting Complex II (LHCII) by Using EPR.
Fehr N, Dietz C, Polyhach Y, von Hagens T, Jeschke G, Paulsen H., J Biol Chem 290(43), 2015
PMID: 26316535
Navigating Membrane Protein Structure, Dynamics, and Energy Landscapes Using Spin Labeling and EPR Spectroscopy.
Claxton DP, Kazmier K, Mishra S, Mchaourab HS., Methods Enzymol 564(), 2015
PMID: 26477257
Spin labeling and Double Electron-Electron Resonance (DEER) to Deconstruct Conformational Ensembles of HIV Protease.
Casey TM, Fanucci GE., Methods Enzymol 564(), 2015
PMID: 26477251
Pulsed EPR dipolar spectroscopy at Q- and G-band on a trityl biradical.
Akhmetzyanov D, Schöps P, Marko A, Kunjir NC, Sigurdsson ST, Prisner TF., Phys Chem Chem Phys 17(37), 2015
PMID: 26339694
Encoded loop-lanthanide-binding tags for long-range distance measurements in proteins by NMR and EPR spectroscopy.
Barthelmes D, Gränz M, Barthelmes K, Allen KN, Imperiali B, Prisner T, Schwalbe H., J Biomol NMR 63(3), 2015
PMID: 26341230
Synaptotagmin-1 binds to PIP(2)-containing membrane but not to SNAREs at physiological ionic strength.
Park Y, Seo JB, Fraind A, Pérez-Lara A, Yavuz H, Han K, Jung SR, Kattan I, Walla PJ, Choi M, Cafiso DS, Koh DS, Jahn R., Nat Struct Mol Biol 22(10), 2015
PMID: 26389740
A chimeric prokaryotic pentameric ligand-gated channel reveals distinct pathways of activation.
Schmandt N, Velisetty P, Chalamalasetti SV, Stein RA, Bonner R, Talley L, Parker MD, Mchaourab HS, Yee VC, Lodowski DT, Chakrapani S., J Gen Physiol 146(4), 2015
PMID: 26415570
Measurement of deformations by NMR.
Bytchenkoff D, Rodts S., J Magn Reson 261(), 2015
PMID: 26529203
The C34 Peptide Fusion Inhibitor Binds to the Six-Helix Bundle Core Domain of HIV-1 gp41 by Displacement of the C-Terminal Helical Repeat Region.
Louis JM, Baber JL, Clore GM., Biochemistry 54(45), 2015
PMID: 26506247
Mn(II) tags for DEER distance measurements in proteins via C-S attachment.
Martorana A, Yang Y, Zhao Y, Li QF, Su XC, Goldfarb D., Dalton Trans 44(48), 2015
PMID: 26575837
Binding dynamics of a monomeric SSB protein to DNA: a single-molecule multi-process approach.
Morten MJ, Peregrina JR, Figueira-Gonzalez M, Ackermann K, Bode BE, White MF, Penedo JC., Nucleic Acids Res 43(22), 2015
PMID: 26578575
Doubly Spin-Labeled RNA as an EPR Reporter for Studying Multicomponent Supramolecular Assemblies.
Malygin AA, Graifer DM, Meschaninova MI, Venyaminova AG, Krumkacheva OA, Fedin MV, Karpova GG, Bagryanskaya EG., Biophys J 109(12), 2015
PMID: 26682820
Energetic analysis of the rhodopsin-G-protein complex links the α5 helix to GDP release.
Alexander NS, Preininger AM, Kaya AI, Stein RA, Hamm HE, Meiler J., Nat Struct Mol Biol 21(1), 2014
PMID: 24292645
Organization of the mitochondrial apoptotic BAK pore: oligomerization of the BAK homodimers.
Aluvila S, Mandal T, Hustedt E, Fajer P, Choe JY, Oh KJ., J Biol Chem 289(5), 2014
PMID: 24337568
Synthesis and conformational properties of a TOAC doubly spin-labeled analog of the medium-length, membrane active peptaibiotic ampullosporin A as revealed by CD, fluorescence, and EPR spectroscopies.
Milov AD, Tsvetkov YD, Bortolus M, Maniero AL, Gobbo M, Toniolo C, Formaggio F., Biopolymers 102(1), 2014
PMID: 23896794
Self-association of arrestin family members.
Chen Q, Zhuo Y, Kim M, Hanson SM, Francis DJ, Vishnivetskiy SA, Altenbach C, Klug CS, Hubbell WL, Gurevich VV., Handb Exp Pharmacol 219(), 2014
PMID: 24292832
Advanced magnetic resonance strategies for the elucidation of nanostructured soft matter.
Graf R, Hansen MR, Hinderberger D, Muennemann K, Spiess HW., Phys Chem Chem Phys 16(21), 2014
PMID: 24419644
Perturbations of the straight transmembrane α-helical structure of the amyloid precursor protein affect its processing by γ-secretase.
Lemmin T, Dimitrov M, Fraering PC, Dal Peraro M., J Biol Chem 289(10), 2014
PMID: 24469457
Structural insights into membrane interaction and caveolar targeting of dynamin-like EHD2.
Shah C, Hegde BG, Morén B, Behrmann E, Mielke T, Moenke G, Spahn CMT, Lundmark R, Daumke O, Langen R., Structure 22(3), 2014
PMID: 24508342
Conformational changes of the histidine ATP-binding cassette transporter studied by double electron-electron resonance spectroscopy.
Sippach M, Weidlich D, Klose D, Abé C, Klare J, Schneider E, Steinhoff HJ., Biochim Biophys Acta 1838(7), 2014
PMID: 24583084
Diversification of EPR signatures in Site Directed Spin Labeling using a β-phosphorylated nitroxide.
Le Breton N, Martinho M, Kabytaev K, Topin J, Mileo E, Blocquel D, Habchi J, Longhi S, Rockenbauer A, Golebiowski J, Guigliarelli B, Marque SR, Belle V., Phys Chem Chem Phys 16(9), 2014
PMID: 24452480
Open and closed conformations of the isolated transmembrane domain of death receptor 5 support a new model of activation.
Lewis AK, James ZM, McCaffrey JE, Braun AR, Karim CB, Thomas DD, Sachs JN., Biophys J 106(6), 2014
PMID: 24655519
Mapping protein conformational heterogeneity under pressure with site-directed spin labeling and double electron-electron resonance.
Lerch MT, Yang Z, Brooks EK, Hubbell WL., Proc Natl Acad Sci U S A 111(13), 2014
PMID: 24707053
Conformational dynamics of ligand-dependent alternating access in LeuT.
Kazmier K, Sharma S, Quick M, Islam SM, Roux B, Weinstein H, Javitch JA, McHaourab HS., Nat Struct Mol Biol 21(5), 2014
PMID: 24747939
A versatile approach for site-directed spin labeling and structural EPR studies of RNAs.
Babaylova ES, Ivanov AV, Malygin AA, Vorobjeva MA, Venyaminova AG, Polienko YF, Kirilyuk IA, Krumkacheva OA, Fedin MV, Karpova GG, Bagryanskaya EG., Org Biomol Chem 12(19), 2014
PMID: 24714823
EPR-aided approach for solution structure determination of large RNAs or protein-RNA complexes.
Duss O, Yulikov M, Jeschke G, Allain FH., Nat Commun 5(), 2014
PMID: 24828280
Structural basis of the non-coding RNA RsmZ acting as a protein sponge.
Duss O, Michel E, Yulikov M, Schubert M, Jeschke G, Allain FH., Nature 509(7502), 2014
PMID: 24828038
Gd3+ spin labeling for distance measurements by pulse EPR spectroscopy.
Goldfarb D., Phys Chem Chem Phys 16(21), 2014
PMID: 24429839
Double electron-electron resonance reveals cAMP-induced conformational change in HCN channels.
Puljung MC, DeBerg HA, Zagotta WN, Stoll S., Proc Natl Acad Sci U S A 111(27), 2014
PMID: 24958877
Effects of PRE and POST therapy drug-pressure selected mutations on HIV-1 protease conformational sampling.
Carter JD, Gonzales EG, Huang X, Smith AN, de Vera IM, D'Amore PW, Rocca JR, Goodenow MM, Dunn BM, Fanucci GE., FEBS Lett 588(17), 2014
PMID: 24983495
A high-frequency electron paramagnetic resonance spectrometer for multi-dimensional, multi-frequency, and multi-phase pulsed measurements.
Cho FH, Stepanov V, Takahashi S., Rev Sci Instrum 85(7), 2014
PMID: 25085176
Origins of structural flexibility in protein-based supramolecular polymers revealed by DEER spectroscopy.
Tavenor NA, Silva KI, Saxena S, Horne WS., J Phys Chem B 118(33), 2014
PMID: 25060334
Characterizing solution surface loop conformational flexibility of the GM2 activator protein.
Carter JD, Mathias JD, Gomez EF, Ran Y, Xu F, Galiano L, Tran NQ, D'Amore PW, Wright CS, Chakravorty DK, Fanucci GE., J Phys Chem B 118(36), 2014
PMID: 25127419
Analysis of influenza A virus NS1 dimer interfaces in solution by pulse EPR distance measurements.
Kerry PS, Turkington HL, Ackermann K, Jameison SA, Bode BE., J Phys Chem B 118(37), 2014
PMID: 25148246
Alpha-synuclein binds to the inner membrane of mitochondria in an α-helical conformation.
Robotta M, Gerding HR, Vogel A, Hauser K, Schildknecht S, Karreman C, Leist M, Subramaniam V, Drescher M., Chembiochem 15(17), 2014
PMID: 25209675
The spatial effect of protein deuteration on nitroxide spin-label relaxation: implications for EPR distance measurement.
El Mkami H, Ward R, Bowman A, Owen-Hughes T, Norman DG., J Magn Reson 248(), 2014
PMID: 25310878
Conformational cycle and ion-coupling mechanism of the Na+/hydantoin transporter Mhp1.
Kazmier K, Sharma S, Islam SM, Roux B, Mchaourab HS., Proc Natl Acad Sci U S A 111(41), 2014
PMID: 25267652
Long-range distance measurements in proteins at physiological temperatures using saturation recovery EPR spectroscopy.
Yang Z, Jiménez-Osés G, López CJ, Bridges MD, Houk KN, Hubbell WL., J Am Chem Soc 136(43), 2014
PMID: 25290172
The structure and regulation of human muscle α-actinin.
Ribeiro Ede A, Pinotsis N, Ghisleni A, Salmazo A, Konarev PV, Kostan J, Sjöblom B, Schreiner C, Polyansky AA, Gkougkoulia EA, Holt MR, Aachmann FL, Zagrović B, Bordignon E, Pirker KF, Svergun DI, Gautel M, Djinović-Carugo K., Cell 159(6), 2014
PMID: 25433700
Closure of the cytoplasmic gate formed by TM5 and TM11 during transport in the oxalate/formate exchanger from Oxalobacter formigenes.
Iyalomhe O, Herrick DZ, Cafiso DS, Maloney PC., Biochemistry 53(49), 2014
PMID: 25409483
Strategies for the synthesis of yardsticks and abaci for nanometre distance measurements by pulsed EPR.
Valera S, Bode BE., Molecules 19(12), 2014
PMID: 25479188
Measurement of rate constants for homodimer subunit exchange using double electron-electron resonance and paramagnetic relaxation enhancements.
Yang Y, Ramelot TA, Ni S, McCarrick RM, Kennedy MA., J Biomol NMR 55(1), 2013
PMID: 23180051
An algorithm to analyze PELDOR data of rigid spin label pairs.
Marko A, Prisner TF., Phys Chem Chem Phys 15(2), 2013
PMID: 23183777
Site-directed spin-labeling of nucleotides and the use of in-cell EPR to determine long-range distances in a biologically relevant environment.
Azarkh M, Singh V, Okle O, Seemann IT, Dietrich DR, Hartig JS, Drescher M., Nat Protoc 8(1), 2013
PMID: 23257982
Role of the C-terminal domain in the structure and function of tetrameric sodium channels.
Bagnéris C, Decaen PG, Hall BA, Naylor CE, Clapham DE, Kay CW, Wallace BA., Nat Commun 4(), 2013
PMID: 24051986
Refined distances between paramagnetic centers of a multi-copper nitrite reductase determined by pulsed EPR (iDEER) spectroscopy.
van Wonderen JH, Kostrz DN, Dennison C, MacMillan F., Angew Chem Int Ed Engl 52(7), 2013
PMID: 23296685
Dynamic nuclear polarization methods in solids and solutions to explore membrane proteins and membrane systems.
Cheng CY, Han S., Annu Rev Phys Chem 64(), 2013
PMID: 23331309
Conformational ensemble of the sodium-coupled aspartate transporter.
Georgieva ER, Borbat PP, Ginter C, Freed JH, Boudker O., Nat Struct Mol Biol 20(2), 2013
PMID: 23334289
Conformational heterogeneity of the aspartate transporter Glt(Ph).
Hänelt I, Wunnicke D, Bordignon E, Steinhoff HJ, Slotboom DJ., Nat Struct Mol Biol 20(2), 2013
PMID: 23334291
Analytical distance distributions in systems of spherical symmetry with applications to double electron-electron resonance.
Kattnig DR, Hinderberger D., J Magn Reson 230(), 2013
PMID: 23454574
Orthogonal spin labeling and Gd(III)-nitroxide distance measurements on bacteriophage T4-lysozyme.
Garbuio L, Bordignon E, Brooks EK, Hubbell WL, Jeschke G, Yulikov M., J Phys Chem B 117(11), 2013
PMID: 23442004
Suppression of ghost distances in multiple-spin double electron-electron resonance.
von Hagens T, Polyhach Y, Sajid M, Godt A, Jeschke G., Phys Chem Chem Phys 15(16), 2013
PMID: 23487036
The architecture of EssB, an integral membrane component of the type VII secretion system.
Zoltner M, Norman DG, Fyfe PK, El Mkami H, Palmer T, Hunter WN., Structure 21(4), 2013
PMID: 23499020
Conformational plasticity of the type I maltose ABC importer.
Böhm S, Licht A, Wuttge S, Schneider E, Bordignon E., Proc Natl Acad Sci U S A 110(14), 2013
PMID: 23509285
Allosteric control of syntaxin 1a by Munc18-1: characterization of the open and closed conformations of syntaxin.
Dawidowski D, Cafiso DS., Biophys J 104(7), 2013
PMID: 23561535
Monomeric TonB and the Ton box are required for the formation of a high-affinity transporter-TonB complex.
Freed DM, Lukasik SM, Sikora A, Mokdad A, Cafiso DS., Biochemistry 52(15), 2013
PMID: 23517233
Structural characterization of quadruplex DNA with in-cell EPR approaches.
Holder IT, Drescher M, Hartig JS., Bioorg Med Chem 21(20), 2013
PMID: 23693068
Using bound fatty acids to disclose the functional structure of serum albumin.
Reichenwallner J, Hinderberger D., Biochim Biophys Acta 1830(12), 2013
PMID: 23643928
Elucidating a relationship between conformational sampling and drug resistance in HIV-1 protease.
de Vera IM, Smith AN, Dancel MC, Huang X, Dunn BM, Fanucci GE., Biochemistry 52(19), 2013
PMID: 23566104
Sensitive Cu2+-Cu2+ distance measurements in a protein-DNA complex by double-quantum coherence ESR.
Ruthstein S, Ji M, Mehta P, Jen-Jacobson L, Saxena S., J Phys Chem B 117(20), 2013
PMID: 23631829
Binding of the CYK-4 subunit of the centralspindlin complex induces a large scale conformational change in the kinesin subunit.
White EA, Raghuraman H, Perozo E, Glotzer M., J Biol Chem 288(27), 2013
PMID: 23720745
PELDOR in rotationally symmetric homo-oligomers.
Giannoulis A, Ward R, Branigan E, Naismith JH, Bode BE., Mol Phys 111(18-19), 2013
PMID: 24954956
Extending the distance range accessed with continuous wave EPR with Gd3+ spin probes at high magnetic fields.
Edwards DT, Ma Z, Meade TJ, Goldfarb D, Han S, Sherwin MS., Phys Chem Chem Phys 15(27), 2013
PMID: 23732863
A structural model of PpoA derived from SAXS-analysis-implications for substrate conversion.
Koch C, Tria G, Fielding AJ, Brodhun F, Valerius O, Feussner K, Braus GH, Svergun DI, Bennati M, Feussner I., Biochim Biophys Acta 1831(9), 2013
PMID: 23797010
ESR study of interfacial hydration layers of polypeptides in water-filled nanochannels and in vitrified bulk solvents.
Lai YC, Chen YF, Chiang YW., PLoS One 8(6), 2013
PMID: 23840841
Structure of p53 binding to the BAX response element reveals DNA unwinding and compression to accommodate base-pair insertion.
Chen Y, Zhang X, Dantas Machado AC, Ding Y, Chen Z, Qin PZ, Rohs R, Chen L., Nucleic Acids Res 41(17), 2013
PMID: 23836939
The topology, in model membranes, of the core peptide derived from the T-cell receptor transmembrane domain.
Matalon E, Faingold O, Eisenstein M, Shai Y, Goldfarb D., Chembiochem 14(14), 2013
PMID: 23881822
High-field EPR on membrane proteins - crossing the gap to NMR.
Möbius K, Lubitz W, Savitsky A., Prog Nucl Magn Reson Spectrosc 75(), 2013
PMID: 24160760
Na⁺-substrate coupling in the multidrug antiporter norm probed with a spin-labeled substrate.
Steed PR, Stein RA, Mishra S, Goodman MC, McHaourab HS., Biochemistry 52(34), 2013
PMID: 23902581
Double electron-electron resonance probes Ca²⁺-induced conformational changes and dimerization of recoverin.
Myers WK, Xu X, Li C, Lagerstedt JO, Budamagunta MS, Voss JC, Britt RD, Ames JB., Biochemistry 52(34), 2013
PMID: 23906368
Use of electron paramagnetic resonance to solve biochemical problems.
Sahu ID, McCarrick RM, Lorigan GA., Biochemistry 52(35), 2013
PMID: 23961941
In-situ spin labeling of his-tagged proteins: distance measurements under in-cell conditions.
Baldauf C, Schulze K, Lueders P, Bordignon E, Tampé R., Chemistry 19(41), 2013
PMID: 24038571
Increasing sensitivity of pulse EPR experiments using echo train detection schemes.
Mentink-Vigier F, Collauto A, Feintuch A, Kaminker I, Tarle V, Goldfarb D., J Magn Reson 236(), 2013
PMID: 24121563
Gadolinium(III) spin labels for high-sensitivity distance measurements in transmembrane helices.
Matalon E, Huber T, Hagelueken G, Graham B, Frydman V, Feintuch A, Otting G, Goldfarb D., Angew Chem Int Ed Engl 52(45), 2013
PMID: 24106050
Disruption of LptA oligomerization and affinity of the LptA-LptC interaction.
Schultz KM, Feix JB, Klug CS., Protein Sci 22(11), 2013
PMID: 24123237
Pulsed EPR distance measurements in soluble proteins by site-directed spin labeling (SDSL).
de Vera IM, Blackburn ME, Galiano L, Fanucci GE., Curr Protoc Protein Sci 74(), 2013
PMID: 24510645
Site-directed spin labeling reveals pentameric ligand-gated ion channel gating motions.
Dellisanti CD, Ghosh B, Hanson SM, Raspanti JM, Grant VA, Diarra GM, Schuh AM, Satyshur K, Klug CS, Czajkowski C., PLoS Biol 11(11), 2013
PMID: 24260024
Computer modeling of nitroxide spin labels on proteins.
Hatmal MM, Li Y, Hegde BG, Hegde PB, Jao CC, Langen R, Haworth IS., Biopolymers 97(1), 2012
PMID: 21792846
Rigid core and flexible terminus: structure of solubilized light-harvesting chlorophyll a/b complex (LHCII) measured by EPR.
Dockter C, Müller AH, Dietz C, Volkov A, Polyhach Y, Jeschke G, Paulsen H., J Biol Chem 287(4), 2012
PMID: 22147706
Concentration-dependent oligomerization and oligomeric arrangement of LptA.
Merten JA, Schultz KM, Klug CS., Protein Sci 21(2), 2012
PMID: 22109962
Global structure of a three-way junction in a phi29 packaging RNA dimer determined using site-directed spin labeling.
Zhang X, Tung CS, Sowa GZ, Hatmal MM, Haworth IS, Qin PZ., J Am Chem Soc 134(5), 2012
PMID: 22229766
DEER distance measurements on proteins.
Jeschke G., Annu Rev Phys Chem 63(), 2012
PMID: 22404592
Spectroscopic selection of distance measurements in a protein dimer with mixed nitroxide and Gd3+ spin labels.
Kaminker I, Yagi H, Huber T, Feintuch A, Otting G, Goldfarb D., Phys Chem Chem Phys 14(13), 2012
PMID: 22362220
Intracellular conformations of human telomeric quadruplexes studied by electron paramagnetic resonance spectroscopy.
Azarkh M, Singh V, Okle O, Dietrich DR, Hartig JS, Drescher M., Chemphyschem 13(6), 2012
PMID: 22396158
Hunting the chameleon: structural conformations of the intrinsically disordered protein alpha-synuclein.
Drescher M, Huber M, Subramaniam V., Chembiochem 13(6), 2012
PMID: 22438319
The global analysis of DEER data.
Brandon S, Beth AH, Hustedt EJ., J Magn Reson 218(), 2012
PMID: 22578560
Asymmetry in the homodimeric ABC transporter MsbA recognized by a DARPin.
Mittal A, Böhm S, Grütter MG, Bordignon E, Seeger MA., J Biol Chem 287(24), 2012
PMID: 22523072
Dynamic interaction of cBid with detergents, liposomes and mitochondria.
Bleicken S, García-Sáez AJ, Conte E, Bordignon E., PLoS One 7(4), 2012
PMID: 22540011
Conformations of individual quadruplex units studied in the context of extended human telomeric DNA.
Singh V, Azarkh M, Drescher M, Hartig JS., Chem Commun (Camb) 48(66), 2012
PMID: 22531827
Solution structure of the ESCRT-I and -II supercomplex: implications for membrane budding and scission.
Boura E, Różycki B, Chung HS, Herrick DZ, Canagarajah B, Cafiso DS, Eaton WA, Hummer G, Hurley JH., Structure 20(5), 2012
PMID: 22579254
Inter-spin distance determination using L-band (1-2 GHz) non-adiabatic rapid sweep electron paramagnetic resonance (NARS EPR).
Kittell AW, Hustedt EJ, Hyde JS., J Magn Reson 221(), 2012
PMID: 22750251
Pulsed ESR dipolar spectroscopy for distance measurements in immobilized spin labeled proteins in liquid solution.
Yang Z, Liu Y, Borbat P, Zweier JL, Freed JH, Hubbell WL., J Am Chem Soc 134(24), 2012
PMID: 22676043
Distance measurements in Au nanoparticles functionalized with nitroxide radicals and Gd(3+)-DTPA chelate complexes.
Yulikov M, Lueders P, Warsi MF, Chechik V, Jeschke G., Phys Chem Chem Phys 14(30), 2012
PMID: 22743649
Crystal structure of the UvrB dimer: insights into the nature and functioning of the UvrAB damage engagement and UvrB-DNA complexes.
Webster MP, Jukes R, Zamfir VS, Kay CW, Bagnéris C, Barrett T., Nucleic Acids Res 40(17), 2012
PMID: 22753105
High sensitivity and versatility of the DEER experiment on nitroxide radical pairs at Q-band frequencies.
Polyhach Y, Bordignon E, Tschaggelar R, Gandra S, Godt A, Jeschke G., Phys Chem Chem Phys 14(30), 2012
PMID: 22751953
Spatial arrangement of rhodopsin in retinal rod outer segment membranes studied by spin-labeling and pulsed electron double resonance.
Yasuda S, Hara H, Tokunaga F, Arata T., Biochem Biophys Res Commun 425(2), 2012
PMID: 22842041
Mapping molecular flexibility of proteins with site-directed spin labeling: a case study of myoglobin.
López CJ, Oga S, Hubbell WL., Biochemistry 51(33), 2012
PMID: 22809279
Pulsed electron paramagnetic resonance spectroscopy powered by a free-electron laser.
Takahashi S, Brunel LC, Edwards DT, van Tol J, Ramian G, Han S, Sherwin MS., Nature 489(7416), 2012
PMID: 22996555
Ligand-induced structural changes in the Escherichia coli ferric citrate transporter reveal modes for regulating protein-protein interactions.
Mokdad A, Herrick DZ, Kahn AK, Andrews E, Kim M, Cafiso DS., J Mol Biol 423(5), 2012
PMID: 22982293
Conformational selection underlies recognition of a molybdoenzyme by its dedicated chaperone.
Lorenzi M, Sylvi L, Gerbaud G, Mileo E, Halgand F, Walburger A, Vezin H, Belle V, Guigliarelli B, Magalon A., PLoS One 7(11), 2012
PMID: 23185350
Taking the pulse of protein interactions by EPR spectroscopy.
Cafiso DS., Biophys J 103(10), 2012
PMID: 23200037
Locating a lipid at the portal to the lipoxygenase active site.
Gaffney BJ, Bradshaw MD, Frausto SD, Wu F, Freed JH, Borbat P., Biophys J 103(10), 2012
PMID: 23200047
Inhibitor-induced conformational shifts and ligand-exchange dynamics for HIV-1 protease measured by pulsed EPR and NMR spectroscopy.
Huang X, de Vera IM, Veloro AM, Blackburn ME, Kear JL, Carter JD, Rocca JR, Simmerling C, Dunn BM, Fanucci GE., J Phys Chem B 116(49), 2012
PMID: 23167829
Simultaneous acquisition of pulse EPR orientation selective spectra.
Kaminker I, Florent M, Epel B, Goldfarb D., J Magn Reson 208(1), 2011
PMID: 21075028
Structural NMR of protein oligomers using hybrid methods.
Wang X, Lee HW, Liu Y, Prestegard JH., J Struct Biol 173(3), 2011
PMID: 21074622
Synaptotagmin 1 and SNAREs form a complex that is structurally heterogeneous.
Lai AL, Huang H, Herrick DZ, Epp N, Cafiso DS., J Mol Biol 405(3), 2011
PMID: 21087613
Ligand-induced conformational capture of a synthetic tetracycline riboswitch revealed by pulse EPR.
Wunnicke D, Strohbach D, Weigand JE, Appel B, Feresin E, Suess B, Müller S, Steinhoff HJ., RNA 17(1), 2011
PMID: 21097555
Direct evidence of coexisting horseshoe and extended helix conformations of membrane-bound alpha-synuclein.
Robotta M, Braun P, van Rooijen B, Subramaniam V, Huber M, Drescher M., Chemphyschem 12(2), 2011
PMID: 21275016
Studying biomolecular complexes with pulsed electron-electron double resonance spectroscopy.
Reginsson GW, Schiemann O., Biochem Soc Trans 39(1), 2011
PMID: 21265760
Conformation of peptides bound to the transporter associated with antigen processing (TAP).
Herget M, Baldauf C, Schölz C, Parcej D, Wiesmüller KH, Tampé R, Abele R, Bordignon E., Proc Natl Acad Sci U S A 108(4), 2011
PMID: 21205905
Pulsed dipolar spectroscopy distance measurements in biomacromolecules labeled with Gd(III) markers.
Song Y, Meade TJ, Astashkin AV, Klein EL, Enemark JH, Raitsimring A., J Magn Reson 210(1), 2011
PMID: 21388847
Probing structural transitions in both structured and disordered proteins using site-directed spin-labeling EPR spectroscopy.
Longhi S, Belle V, Fournel A, Guigliarelli B, Carrière F., J Pept Sci 17(5), 2011
PMID: 21351321
Pulsed electron-electron double resonance: beyond nanometre distance measurements on biomacromolecules.
Reginsson GW, Schiemann O., Biochem J 434(3), 2011
PMID: 21348855
Induced conformational changes in the activation of the Pseudomonas aeruginosa type III toxin, ExoU.
Benson MA, Komas SM, Schmalzer KM, Casey MS, Frank DW, Feix JB., Biophys J 100(5), 2011
PMID: 21354407
Effects of the L511P and D512G mutations on the Escherichia coli ABC transporter MsbA.
Schultz KM, Merten JA, Klug CS., Biochemistry 50(13), 2011
PMID: 21344946
DEER in biological multispin-systems: a case study on the fatty acid binding to human serum albumin.
Junk MJ, Spiess HW, Hinderberger D., J Magn Reson 210(2), 2011
PMID: 21450500
The E3 ubiquitin ligase- and protein phosphatase 2A (PP2A)-binding domains of the Alpha4 protein are both required for Alpha4 to inhibit PP2A degradation.
LeNoue-Newton M, Watkins GR, Zou P, Germane KL, McCorvey LR, Wadzinski BE, Spiller BW., J Biol Chem 286(20), 2011
PMID: 21454489
Characterization of the E506Q and H537A dysfunctional mutants in the E. coli ABC transporter MsbA.
Schultz KM, Merten JA, Klug CS., Biochemistry 50(18), 2011
PMID: 21462989
Characterization of the solution structure of human serum albumin loaded with a metal porphyrin and fatty acids.
Junk MJ, Spiess HW, Hinderberger D., Biophys J 100(9), 2011
PMID: 21539799
Broad disorder and the allosteric mechanism of myosin II regulation by phosphorylation.
Vileno B, Chamoun J, Liang H, Brewer P, Haldeman BD, Facemyer KC, Salzameda B, Song L, Li HC, Cremo CR, Fajer PG., Proc Natl Acad Sci U S A 108(20), 2011
PMID: 21536903
W-Band pulse EPR distance measurements in peptides using Gd(3+)-dipicolinic acid derivatives as spin labels.
Gordon-Grossman M, Kaminker I, Gofman Y, Shai Y, Goldfarb D., Phys Chem Chem Phys 13(22), 2011
PMID: 21552622
Interconversion between bound and free conformations of LexA orchestrates the bacterial SOS response.
Butala M, Klose D, Hodnik V, Rems A, Podlesek Z, Klare JP, Anderluh G, Busby SJ, Steinhoff HJ, Zgur-Bertok D., Nucleic Acids Res 39(15), 2011
PMID: 21576225
Interaction of a G protein with an activated receptor opens the interdomain interface in the alpha subunit.
Van Eps N, Preininger AM, Alexander N, Kaya AI, Meier S, Meiler J, Hamm HE, Hubbell WL., Proc Natl Acad Sci U S A 108(23), 2011
PMID: 21606326
Crystal structure of the FimD usher bound to its cognate FimC-FimH substrate.
Phan G, Remaut H, Wang T, Allen WJ, Pirker KF, Lebedev A, Henderson NS, Geibel S, Volkan E, Yan J, Kunze MB, Pinkner JS, Ford B, Kay CW, Li H, Hultgren SJ, Thanassi DG, Waksman G., Nature 474(7349), 2011
PMID: 21637253
PELDOR analysis of enzyme-induced structural changes in damaged DNA duplexes.
Kuznetsov NA, Milov AD, Isaev NP, Vorobjev YN, Koval VV, Dzuba SA, Fedorova OS, Tsvetkov YD., Mol Biosyst 7(9), 2011
PMID: 21731955
Mechanism of multivalent carbohydrate-protein interactions studied by EPR spectroscopy.
Braun P, Nägele B, Wittmann V, Drescher M., Angew Chem Int Ed Engl 50(36), 2011
PMID: 21739541
Mesopores provide an amorphous state suitable for studying biomolecular structures at cryogenic temperatures.
Huang YW, Lai YC, Tsai CJ, Chiang YW., Proc Natl Acad Sci U S A 108(34), 2011
PMID: 21844377
High-field dipolar electron paramagnetic resonance (EPR) spectroscopy of nitroxide biradicals for determining three-dimensional structures of biomacromolecules in disordered solids.
Savitsky A, Dubinskii AA, Zimmermann H, Lubitz W, Möbius K., J Phys Chem B 115(41), 2011
PMID: 21879744
Monomeric and dimeric conformation of the vinculin tail five-helix bundle in solution studied by EPR spectroscopy.
Abé C, Dietrich F, Gajula P, Benz M, Vogel KP, van Gastel M, Illenberger S, Ziegler WH, Steinhoff HJ., Biophys J 101(7), 2011
PMID: 21961604
Lactose permease and the alternating access mechanism.
Smirnova I, Kasho V, Kaback HR., Biochemistry 50(45), 2011
PMID: 21995338
Equilibration of tyrosyl radicals (Y356•, Y731•, Y730•) in the radical propagation pathway of the Escherichia coli class Ia ribonucleotide reductase.
Yokoyama K, Smith AA, Corzilius B, Griffin RG, Stubbe J., J Am Chem Soc 133(45), 2011
PMID: 21967342
Toward the fourth dimension of membrane protein structure: insight into dynamics from spin-labeling EPR spectroscopy.
McHaourab HS, Steed PR, Kazmier K., Structure 19(11), 2011
PMID: 22078555
Structural and functional impact of site-directed methionine oxidation in myosin.
Klein JC, Moen RJ, Smith EA, Titus MA, Thomas DD., Biochemistry 50(47), 2011
PMID: 21988699
Lipid and membrane mimetic environments modulate spin label side chain configuration in the outer membrane protein A.
Jiménez RH, Freed DM, Cafiso DS., J Phys Chem B 115(49), 2011
PMID: 22034842
Protein conformational dynamics in the mechanism of HIV-1 protease catalysis.
Torbeev VY, Raghuraman H, Hamelberg D, Tonelli M, Westler WM, Perozo E, Kent SB., Proc Natl Acad Sci U S A 108(52), 2011
PMID: 22158985
The role of arrestin alpha-helix I in receptor binding.
Vishnivetskiy SA, Francis D, Van Eps N, Kim M, Hanson SM, Klug CS, Hubbell WL, Gurevich VV., J Mol Biol 395(1), 2010
PMID: 19883657
Distance and dynamics determination by W-band DEER and W-band ST-EPR.
Song L, Larion M, Chamoun J, Bonora M, Fajer PG., Eur Biophys J 39(4), 2010
PMID: 20012080
Molecular details of Bax activation, oligomerization, and membrane insertion.
Bleicken S, Classen M, Padmavathi PV, Ishikawa T, Zeth K, Steinhoff HJ, Bordignon E., J Biol Chem 285(9), 2010
PMID: 20008353
The structure of p85ni in class IA phosphoinositide 3-kinase exhibits interdomain disorder.
Sen KI, Wu H, Backer JM, Gerfen GJ., Biochemistry 49(10), 2010
PMID: 20131869
Distance measurements in model bis-Gd(III) complexes with flexible "bridge". Emulation of biological molecules having flexible structure with Gd(III) labels attached.
Potapov A, Song Y, Meade TJ, Goldfarb D, Astashkin AV, Raitsimring A., J Magn Reson 205(1), 2010
PMID: 20418132
Roles of amphipathic helices and the bin/amphiphysin/rvs (BAR) domain of endophilin in membrane curvature generation.
Jao CC, Hegde BG, Gallop JL, Hegde PB, McMahon HT, Haworth IS, Langen R., J Biol Chem 285(26), 2010
PMID: 20418375
A combinatorial NMR and EPR approach for evaluating the structural ensemble of partially folded proteins.
Rao JN, Jao CC, Hegde BG, Langen R, Ulmer TS., J Am Chem Soc 132(25), 2010
PMID: 20524659
Electron paramagnetic resonance studies of functionally active, nitroxide spin-labeled peptide analogues of the C-terminus of a G-protein alpha subunit.
Van Eps N, Anderson LL, Kisselev OG, Baranski TJ, Hubbell WL, Marshall GR., Biochemistry 49(32), 2010
PMID: 20695526
EPR distance measurements in deuterated proteins.
Ward R, Bowman A, Sozudogru E, El-Mkami H, Owen-Hughes T, Norman DG., J Magn Reson 207(1), 2010
PMID: 20805036
Combining NMR and EPR methods for homodimer protein structure determination.
Yang Y, Ramelot TA, McCarrick RM, Ni S, Feldmann EA, Cort JR, Wang H, Ciccosanti C, Jiang M, Janjua H, Acton TB, Xiao R, Everett JK, Montelione GT, Kennedy MA., J Am Chem Soc 132(34), 2010
PMID: 20698532
The distribution of fatty acids reveals the functional structure of human serum albumin.
Junk MJ, Spiess HW, Hinderberger D., Angew Chem Int Ed Engl 49(46), 2010
PMID: 20886483
Site-directed spin-labeling of DNA by the azide-alkyne 'click' reaction: nanometer distance measurements on 7-deaza-2'-deoxyadenosine and 2'-deoxyuridine nitroxide conjugates spatially separated or linked to a 'dA-dT' base pair.
Ding P, Wunnicke D, Steinhoff HJ, Seela F., Chemistry 16(48), 2010
PMID: 21117098
Backbone structure of transmembrane domain IX of the Na+/proline transporter PutP of Escherichia coli.
Hilger D, Polyhach Y, Jung H, Jeschke G., Biophys J 96(1), 2009
PMID: 19134477
Drug pressure selected mutations in HIV-1 protease alter flap conformations.
Galiano L, Ding F, Veloro AM, Blackburn ME, Simmerling C, Fanucci GE., J Am Chem Soc 131(2), 2009
PMID: 19140783
Intersubunit allosteric communication mediated by a conserved loop in the MCM helicase.
Barry ER, Lovett JE, Costa A, Lea SM, Bell SD., Proc Natl Acad Sci U S A 106(4), 2009
PMID: 19164574
Long distance PELDOR measurements on the histone core particle.
Ward R, Bowman A, El-Mkami H, Owen-Hughes T, Norman DG., J Am Chem Soc 131(4), 2009
PMID: 19138067
Molecular orientation studies by pulsed electron-electron double resonance experiments.
Marko A, Margraf D, Yu H, Mu Y, Stock G, Prisner T., J Chem Phys 130(6), 2009
PMID: 19222262
Pulsed EPR spectroscopy.
van Gastel M., Photosynth Res 102(2-3), 2009
PMID: 19381861
Transmembrane signaling in the maltose ABC transporter MalFGK2-E: periplasmic MalF-P2 loop communicates substrate availability to the ATP-bound MalK dimer.
Grote M, Polyhach Y, Jeschke G, Steinhoff HJ, Schneider E, Bordignon E., J Biol Chem 284(26), 2009
PMID: 19395376
Three-spin correlations in double electron-electron resonance.
Jeschke G, Sajid M, Schulte M, Godt A., Phys Chem Chem Phys 11(31), 2009
PMID: 19639133
PELDOR study of conformations of double-spin-labeled single- and double-stranded DNA with non-nucleotide inserts.
Kuznetsov NA, Milov AD, Koval VV, Samoilova RI, Grishin YA, Knorre DG, Tsvetkov YD, Fedorova OS, Dzuba SA., Phys Chem Chem Phys 11(31), 2009
PMID: 19639157
Significantly improved sensitivity of Q-band PELDOR/DEER experiments relative to X-band is observed in measuring the intercoil distance of a leucine zipper motif peptide (GCN4-LZ).
Ghimire H, McCarrick RM, Budil DE, Lorigan GA., Biochemistry 48(25), 2009
PMID: 19476379
Solution and membrane-bound conformations of the tandem C2A and C2B domains of synaptotagmin 1: Evidence for bilayer bridging.
Herrick DZ, Kuo W, Huang H, Schwieters CD, Ellena JF, Cafiso DS., J Mol Biol 390(5), 2009
PMID: 19501597
Structural information from orientationally selective DEER spectroscopy.
Lovett JE, Bowen AM, Timmel CR, Jones MW, Dilworth JR, Caprotti D, Bell SG, Wong LL, Harmer J., Phys Chem Chem Phys 11(31), 2009
PMID: 19639159
Topology of the amphipathic helices of the colicin A pore-forming domain in E. coli lipid membranes studied by pulse EPR.
Böhme S, Padmavathi PV, Holterhues J, Ouchni F, Klare JP, Steinhoff HJ., Phys Chem Chem Phys 11(31), 2009
PMID: 19639151
NMR and EPR studies of membrane transporters.
Hellmich UA, Glaubitz C., Biol Chem 390(8), 2009
PMID: 19453273
A pulsed EPR method to determine distances between paramagnetic centers with strong spectral anisotropy and radicals: the dead-time free RIDME sequence.
Milikisyants S, Scarpelli F, Finiguerra MG, Ubbink M, Huber M., J Magn Reson 201(1), 2009
PMID: 19758831
Conformational cycle of the ABC transporter MsbA in liposomes: detailed analysis using double electron-electron resonance spectroscopy.
Zou P, Bortolus M, McHaourab HS., J Mol Biol 393(3), 2009
PMID: 19715702
Spin labeling EPR.
Klare JP, Steinhoff HJ., Photosynth Res 102(2-3), 2009
PMID: 19728138
The orientation of a tandem POTRA domain pair, of the beta-barrel assembly protein BamA, determined by PELDOR spectroscopy.
Ward R, Zoltner M, Beer L, El Mkami H, Henderson IR, Palmer T, Norman DG., Structure 17(9), 2009
PMID: 19748339
Subtype polymorphisms among HIV-1 protease variants confer altered flap conformations and flexibility.
Kear JL, Blackburn ME, Veloro AM, Dunn BM, Fanucci GE., J Am Chem Soc 131(41), 2009
PMID: 19788299
A kilowatt pulsed 94 GHz electron paramagnetic resonance spectrometer with high concentration sensitivity, high instantaneous bandwidth, and low dead time.
Cruickshank PA, Bolton DR, Robertson DA, Hunter RI, Wylde RJ, Smith GM., Rev Sci Instrum 80(10), 2009
PMID: 19895049
Pulsed electron-electron double-resonance determination of spin-label distances and orientations on the tetrameric potassium ion channel KcsA.
Endeward B, Butterwick JA, MacKinnon R, Prisner TF., J Am Chem Soc 131(42), 2009
PMID: 19919160
Kissing G domains of MnmE monitored by X-ray crystallography and pulse electron paramagnetic resonance spectroscopy.
Meyer S, Böhme S, Krüger A, Steinhoff HJ, Klare JP, Wittinghofer A., PLoS Biol 7(10), 2009
PMID: 19806182
High-field EPR.
Savitsky A, Möbius K., Photosynth Res 102(2-3), 2009
PMID: 19468856
Conformationally unambiguous spin labeling for distance measurements.
Sajid M, Jeschke G, Wiebcke M, Godt A., Chemistry 15(47), 2009
PMID: 19847831
Structural dynamics of the myosin relay helix by time-resolved EPR and FRET.
Agafonov RV, Negrashov IV, Tkachev YV, Blakely SE, Titus MA, Thomas DD, Nesmelov YE., Proc Natl Acad Sci U S A 106(51), 2009
PMID: 19966224
Site-directed spin labeling of a genetically encoded unnatural amino acid.
Fleissner MR, Brustad EM, Kálai T, Altenbach C, Cascio D, Peters FB, Hideg K, Peuker S, Schultz PG, Hubbell WL., Proc Natl Acad Sci U S A 106(51), 2009
PMID: 19995976
A pulsed EPR study of surfactant layer structure in composites of a synthetic layered silicate with polystyrene and polycaprolactone.
Mao Q, Schleidt S, Zimmermann H, Jeschke G., Phys Chem Chem Phys 10(8), 2008
PMID: 18270618
Distance measurements in the borderline region of applicability of CW EPR and DEER: a model study on a homologous series of spin-labelled peptides.
Banham JE, Baker CM, Ceola S, Day IJ, Grant GH, Groenen EJ, Rodgers CT, Jeschke G, Timmel CR., J Magn Reson 191(2), 2008
PMID: 18280189
High-frequency dynamic nuclear polarization using biradicals: a multifrequency EPR lineshape analysis.
Hu KN, Song C, Yu HH, Swager TM, Griffin RG., J Chem Phys 128(5), 2008
PMID: 18266419
The structure of the lipid-embedded potassium channel voltage sensor determined by double-electron-electron resonance spectroscopy.
Vamvouka M, Cieslak J, Van Eps N, Hubbell W, Gross A., Protein Sci 17(3), 2008
PMID: 18287283
Observer-selective double electron-electron-spin resonance, a pulse sequence to improve orientation selection.
Milikisyants S, Groenen EJ, Huber M., J Magn Reson 192(2), 2008
PMID: 18396431
High-resolution distance mapping in rhodopsin reveals the pattern of helix movement due to activation.
Altenbach C, Kusnetzow AK, Ernst OP, Hofmann KP, Hubbell WL., Proc Natl Acad Sci U S A 105(21), 2008
PMID: 18490656
HYSCORE and DEER with an upgraded 95GHz pulse EPR spectrometer.
Goldfarb D, Lipkin Y, Potapov A, Gorodetsky Y, Epel B, Raitsimring AM, Radoul M, Kaminker I., J Magn Reson 194(1), 2008
PMID: 18571956
A comparative electron paramagnetic resonance study of the nucleotide-binding domains' catalytic cycle in the assembled maltose ATP-binding cassette importer.
Grote M, Bordignon E, Polyhach Y, Jeschke G, Steinhoff HJ, Schneider E., Biophys J 95(6), 2008
PMID: 18567630
Relaxation-based distance measurements between a nitroxide and a lanthanide spin label.
Jäger H, Koch A, Maus V, Spiess HW, Jeschke G., J Magn Reson 194(2), 2008
PMID: 18674941
Salt-driven equilibrium between two conformations in the HAMP domain from Natronomonas pharaonis: the language of signal transfer?
Doebber M, Bordignon E, Klare JP, Holterhues J, Martell S, Mennes N, Li L, Engelhard M, Steinhoff HJ., J Biol Chem 283(42), 2008
PMID: 18697747
Structure of membrane-bound alpha-synuclein from site-directed spin labeling and computational refinement.
Jao CC, Hegde BG, Chen J, Haworth IS, Langen R., Proc Natl Acad Sci U S A 105(50), 2008
PMID: 19066219
Distance determination in human ubiquitin by pulsed double electron-electron resonance and double quantum coherence ESR methods.
Hara H, Tenno T, Shirakawa M., J Magn Reson 184(1), 2007
PMID: 17046296
Spin pair geometry revealed by high-field DEER in the presence of conformational distributions.
Polyhach Y, Godt A, Bauer C, Jeschke G., J Magn Reson 185(1), 2007
PMID: 17188008
Measuring nanometer distances in nucleic acids using a sequence-independent nitroxide probe.
Qin PZ, Haworth IS, Cai Q, Kusnetzow AK, Grant GP, Price EA, Sowa GZ, Popova A, Herreros B, He H., Nat Protoc 2(10), 2007
PMID: 17947978
Distance measurements on spin-labelled biomacromolecules by pulsed electron paramagnetic resonance.
Jeschke G, Polyhach Y., Phys Chem Chem Phys 9(16), 2007
PMID: 17431518
Long-range distance determinations in biomacromolecules by EPR spectroscopy.
Schiemann O, Prisner TF., Q Rev Biophys 40(1), 2007
PMID: 17565764
Structure and function of the visual arrestin oligomer.
Hanson SM, Van Eps N, Francis DJ, Altenbach C, Vishnivetskiy SA, Arshavsky VY, Klug CS, Hubbell WL, Gurevich VV., EMBO J 26(6), 2007
PMID: 17332750
Membrane insertion and bilayer perturbation by antimicrobial peptide CM15.
Pistolesi S, Pogni R, Feix JB., Biophys J 93(5), 2007
PMID: 17496013
Structure and analysis of FCHo2 F-BAR domain: a dimerizing and membrane recruitment module that effects membrane curvature.
Henne WM, Kent HM, Ford MG, Hegde BG, Daumke O, Butler PJ, Mittal R, Langen R, Evans PR, McMahon HT., Structure 15(7), 2007
PMID: 17540576
On Cu(II)-Cu(II) distance measurements using pulsed electron electron double resonance.
Yang Z, Becker J, Saxena S., J Magn Reson 188(2), 2007
PMID: 17825593
High-resolution structure of a Na+/H+ antiporter dimer obtained by pulsed electron paramagnetic resonance distance measurements.
Hilger D, Polyhach Y, Padan E, Jung H, Jeschke G., Biophys J 93(10), 2007
PMID: 17704177
Spectroscopic validation of the pentameric structure of phospholamban.
Traaseth NJ, Verardi R, Torgersen KD, Karim CB, Thomas DD, Veglia G., Proc Natl Acad Sci U S A 104(37), 2007
PMID: 17804809
Conformational motion of the ABC transporter MsbA induced by ATP hydrolysis.
Borbat PP, Surendhran K, Bortolus M, Zou P, Freed JH, Mchaourab HS., PLoS Biol 5(10), 2007
PMID: 17927448
Sugar binding induces an outward facing conformation of LacY.
Smirnova I, Kasho V, Choe JY, Altenbach C, Hubbell WL, Kaback HR., Proc Natl Acad Sci U S A 104(42), 2007
PMID: 17925435
Distance determination in heterogeneous DNA model systems by pulsed EPR.
Ward R, Keeble DJ, El-Mkami H, Norman DG., Chembiochem 8(16), 2007
PMID: 17886320
Distance measurement between Tyr10 and Met35 in amyloid beta by site-directed spin-labeling ESR spectroscopy: implications for the stronger neurotoxicity of Abeta42 than Abeta40.
Murakami K, Hara H, Masuda Y, Ohigashi H, Irie K., Chembiochem 8(18), 2007
PMID: 18022992
Secondary transport of amino acids in prokaryotes.
Jung H, Pirch T, Hilger D., J Membr Biol 213(2), 2006
PMID: 17417701
The characterization of weak protein-protein interactions: evidence from DEER for the trimerization of a von Willebrand Factor A domain in solution.
Banham JE, Timmel CR, Abbott RJ, Lea SM, Jeschke G., Angew Chem Int Ed Engl 45(7), 2006
PMID: 16402415
Isotope selection in distance measurements between nitroxides.
Jeschke G, Zimmermann H, Godt A., J Magn Reson 180(1), 2006
PMID: 16495097
Distance between a native cofactor and a spin label in the reaction centre of Rhodobacter sphaeroides by a two-frequency pulsed electron paramagnetic resonance method and molecular dynamics simulations.
Borovykh IV, Ceola S, Gajula P, Gast P, Steinhoff HJ, Huber M., J Magn Reson 180(2), 2006
PMID: 16515869
Spatial distribution of stabilizer-derived nitroxide radicals during thermal degradation of poly(acrylonitrile-butadiene-styrene) copolymers: a unified picture from pulsed ELDOR and ESR imaging.
Jeschke G, Schlick S., Phys Chem Chem Phys 8(35), 2006
PMID: 17028698
Mechanism of the receptor-catalyzed activation of heterotrimeric G proteins.
Oldham WM, Van Eps N, Preininger AM, Hubbell WL, Hamm HE., Nat Struct Mol Biol 13(9), 2006
PMID: 16892066
High-field pulsed electron-electron double resonance spectroscopy to determine the orientation of the tyrosyl radicals in ribonucleotide reductase.
Denysenkov VP, Prisner TF, Stubbe J, Bennati M., Proc Natl Acad Sci U S A 103(36), 2006
PMID: 16938868
Substrate-dependent unfolding of the energy coupling motif of a membrane transport protein determined by double electron-electron resonance.
Xu Q, Ellena JF, Kim M, Cafiso DS., Biochemistry 45(36), 2006
PMID: 16953570
How flexible are poly(para-phenyleneethynylene)s?
Godt A, Schulte M, Zimmermann H, Jeschke G., Angew Chem Int Ed Engl 45(45), 2006
PMID: 17051574
The determination of pair distance distributions by pulsed ESR using Tikhonov regularization.
Chiang YW, Borbat PP, Freed JH., J Magn Reson 172(2), 2005
PMID: 15649755
Track structure in DNA irradiated with heavy ions.
Bowman MK, Becker D, Sevilla MD, Zimbrick JD., Radiat Res 163(4), 2005
PMID: 15799701
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