Leucoanthocyanidin Dioxygenase in Arabidopsis thaliana: Characterization of mutant alleles and regulation by MYB-BHLH-TTG1 transcription factor complexes

Appelhagen I, Jahns O, Bartelniewoehner L, Sagasser M, Weisshaar B, Stracke R (2011)
Gene 484(1-2): 61-68.

Zeitschriftenaufsatz | Veröffentlicht | Englisch
 
Download
Es wurden keine Dateien hochgeladen. Nur Publikationsnachweis!
Abstract / Bemerkung
In Arabidopsis thaliana, most mutants impaired in flavonoid accumulation were identified through screens for altered seed pigmentation. Mutations in more than 20 loci have been described that can result in a transparent testa (tt) or tannin deficient seed (tds) phenotype. For some of these mutants it is still unclear if they represent additional loci or if they are allelic to known mutations. In this study, we found that tt17 is allelic to tt11 and tds4 and identified a point mutation in tt17 that affects the gene encoding Leucoanthocyanidin Dioxygenase (LDOX). The mutation results in replacement of a cysteine close to the active site of the enzyme by the hydrophobic amino acid tyrosine. Effects of this mutation on protein structure and activity are discussed in the context of LDOX sequences from various genotypes. Regulation of the LDOX promoter was analyzed and found to be directly controlled by different MYB-BHLH-TTG1 transcription factor complexes containing the BHLH factors EGL3 and TT8. Experiments with single and double loss-of-function mutants identified EGL3 and TT8 as necessary regulators of anthocyanin accumulation in developing A. thaliana seedlings. Copyright 2011 Elsevier B.V. All rights reserved.
Erscheinungsjahr
2011
Zeitschriftentitel
Gene
Band
484
Ausgabe
1-2
Seite(n)
61-68
ISSN
0378-1119
Page URI
https://pub.uni-bielefeld.de/record/2317309

Zitieren

Appelhagen I, Jahns O, Bartelniewoehner L, Sagasser M, Weisshaar B, Stracke R. Leucoanthocyanidin Dioxygenase in Arabidopsis thaliana: Characterization of mutant alleles and regulation by MYB-BHLH-TTG1 transcription factor complexes. Gene. 2011;484(1-2):61-68.
Appelhagen, I., Jahns, O., Bartelniewoehner, L., Sagasser, M., Weisshaar, B., & Stracke, R. (2011). Leucoanthocyanidin Dioxygenase in Arabidopsis thaliana: Characterization of mutant alleles and regulation by MYB-BHLH-TTG1 transcription factor complexes. Gene, 484(1-2), 61-68. https://doi.org/10.1016/j.gene.2011.05.031
Appelhagen, Ingo, Jahns, Oliver, Bartelniewoehner, Lutz, Sagasser, Martin, Weisshaar, Bernd, and Stracke, Ralf. 2011. “Leucoanthocyanidin Dioxygenase in Arabidopsis thaliana: Characterization of mutant alleles and regulation by MYB-BHLH-TTG1 transcription factor complexes”. Gene 484 (1-2): 61-68.
Appelhagen, I., Jahns, O., Bartelniewoehner, L., Sagasser, M., Weisshaar, B., and Stracke, R. (2011). Leucoanthocyanidin Dioxygenase in Arabidopsis thaliana: Characterization of mutant alleles and regulation by MYB-BHLH-TTG1 transcription factor complexes. Gene 484, 61-68.
Appelhagen, I., et al., 2011. Leucoanthocyanidin Dioxygenase in Arabidopsis thaliana: Characterization of mutant alleles and regulation by MYB-BHLH-TTG1 transcription factor complexes. Gene, 484(1-2), p 61-68.
I. Appelhagen, et al., “Leucoanthocyanidin Dioxygenase in Arabidopsis thaliana: Characterization of mutant alleles and regulation by MYB-BHLH-TTG1 transcription factor complexes”, Gene, vol. 484, 2011, pp. 61-68.
Appelhagen, I., Jahns, O., Bartelniewoehner, L., Sagasser, M., Weisshaar, B., Stracke, R.: Leucoanthocyanidin Dioxygenase in Arabidopsis thaliana: Characterization of mutant alleles and regulation by MYB-BHLH-TTG1 transcription factor complexes. Gene. 484, 61-68 (2011).
Appelhagen, Ingo, Jahns, Oliver, Bartelniewoehner, Lutz, Sagasser, Martin, Weisshaar, Bernd, and Stracke, Ralf. “Leucoanthocyanidin Dioxygenase in Arabidopsis thaliana: Characterization of mutant alleles and regulation by MYB-BHLH-TTG1 transcription factor complexes”. Gene 484.1-2 (2011): 61-68.

27 Zitationen in Europe PMC

Daten bereitgestellt von Europe PubMed Central.

Transcriptomic comparison between developing seeds of yellow- and black-seeded Brassica napus reveals that genes influence seed quality.
Jiang J, Zhu S, Yuan Y, Wang Y, Zeng L, Batley J, Wang YP., BMC Plant Biol 19(1), 2019
PMID: 31096923
An R2R3-MYB transcription factor, OjMYB1, functions in anthocyanin biosynthesis in Oenanthe javanica.
Feng K, Xu ZS, Que F, Liu JX, Wang F, Xiong AS., Planta 247(2), 2018
PMID: 28965159
Cytological, physiological, and transcriptomic analyses of golden leaf coloration in Ginkgo biloba L.
Li W, Yang S, Lu Z, He Z, Ye Y, Zhao B, Wang L, Jin B., Hortic Res 5(), 2018
PMID: 29507736
The Regulation of Sporopollenin Biosynthesis Genes for Rapid Pollen Wall Formation.
Wang K, Guo ZL, Zhou WT, Zhang C, Zhang ZY, Lou Y, Xiong SX, Yao XZ, Fan JJ, Zhu J, Yang ZN., Plant Physiol 178(1), 2018
PMID: 30018171
Analysis of drought-responsive signalling network in two contrasting rice cultivars using transcriptome-based approach.
Borah P, Sharma E, Kaur A, Chandel G, Mohapatra T, Kapoor S, Khurana JP., Sci Rep 7(), 2017
PMID: 28181537
TRANSPARENT TESTA GLABRA 1-Dependent Regulation of Flavonoid Biosynthesis.
Zhang B, Schrader A., Plants (Basel) 6(4), 2017
PMID: 29261137
Functional diversification of the potato R2R3 MYB anthocyanin activators AN1, MYBA1, and MYB113 and their interaction with basic helix-loop-helix cofactors.
Liu Y, Lin-Wang K, Espley RV, Wang L, Yang H, Yu B, Dare A, Varkonyi-Gasic E, Wang J, Zhang J, Wang D, Allan AC., J Exp Bot 67(8), 2016
PMID: 26884602
Multiple post-domestication origins of kabuli chickpea through allelic variation in a diversification-associated transcription factor.
Varma Penmetsa R, Carrasquilla-Garcia N, Bergmann EM, Vance L, Castro B, Kassa MT, Sarma BK, Datta S, Farmer AD, Baek JM, Coyne CJ, Varshney RK, von Wettberg EJ, Cook DR., New Phytol 211(4), 2016
PMID: 27193699
Genetics and Biochemistry of Zero-Tannin Lentils.
Mirali M, Purves RW, Stonehouse R, Song R, Bett K, Vandenberg A., PLoS One 11(10), 2016
PMID: 27788158
Nonsense Mutation Inside Anthocyanidin Synthase Gene Controls Pigmentation in Yellow Raspberry (Rubus idaeus L.).
Rafique MZ, Carvalho E, Stracke R, Palmieri L, Herrera L, Feller A, Malnoy M, Martens S., Front Plant Sci 7(), 2016
PMID: 28066458
Anthocyanin biosynthesis for cold and freezing stress tolerance and desirable color in Brassica rapa.
Ahmed NU, Park JI, Jung HJ, Hur Y, Nou IS., Funct Integr Genomics 15(4), 2015
PMID: 25504198
Transcriptional control of flavonoid biosynthesis by MYB-bHLH-WDR complexes.
Xu W, Dubos C, Lepiniec L., Trends Plant Sci 20(3), 2015
PMID: 25577424
Proteomic and Epigenetic Analyses of Lotus (Nelumbo nucifera) Petals Between Red and White cultivars.
Deng J, Fu Z, Chen S, Damaris RN, Wang K, Li T, Yang P., Plant Cell Physiol 56(8), 2015
PMID: 26019267
A "White" Anthocyanin-less Pomegranate (Punica granatum L.) Caused by an Insertion in the Coding Region of the Leucoanthocyanidin Dioxygenase (LDOX; ANS) Gene.
Ben-Simhon Z, Judeinstein S, Trainin T, Harel-Beja R, Bar-Ya'akov I, Borochov-Neori H, Holland D., PLoS One 10(11), 2015
PMID: 26581077
New insights toward the transcriptional engineering of proanthocyanidin biosynthesis.
Xu W, Lepiniec L, Dubos C., Plant Signal Behav 9(4), 2014
PMID: 24721726
Cloning of TTG1 gene and PCR identification of genomes A, B and C in Brassica species.
Yan M, Liu X, Guan C, Liu L, Xiang J, Lu Y, Liu Z., Genetica 142(2), 2014
PMID: 24752509
Post-harvest UV-B irradiation induces changes of phenol contents and corresponding biosynthetic gene expression in peaches and nectarines.
Scattino C, Castagna A, Neugart S, Chan HM, Schreiner M, Crisosto CH, Tonutti P, Ranieri A., Food Chem 163(), 2014
PMID: 24912695
Update on transparent testa mutants from Arabidopsis thaliana: characterisation of new alleles from an isogenic collection.
Appelhagen I, Thiedig K, Nordholt N, Schmidt N, Huep G, Sagasser M, Weisshaar B., Planta 240(5), 2014
PMID: 24903359
The R2R3-MYB, bHLH, WD40, and related transcription factors in flavonoid biosynthesis.
Zhao L, Gao L, Wang H, Chen X, Wang Y, Yang H, Wei C, Wan X, Xia T., Funct Integr Genomics 13(1), 2013
PMID: 23184474
Regulation of flavonoid biosynthesis involves an unexpected complex transcriptional regulation of TT8 expression, in Arabidopsis.
Xu W, Grain D, Le Gourrierec J, Harscoët E, Berger A, Jauvion V, Scagnelli A, Berger N, Bidzinski P, Kelemen Z, Salsac F, Baudry A, Routaboul JM, Lepiniec L, Dubos C., New Phytol 198(1), 2013
PMID: 23398515
Increased accumulation of anthocyanins in Fragaria chiloensis fruits by transient suppression of FcMYB1 gene.
Salvatierra A, Pimentel P, Moya-León MA, Herrera R., Phytochemistry 90(), 2013
PMID: 23522932

48 References

Daten bereitgestellt von Europe PubMed Central.

The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling.
Arnold K, Bordoli L, Kopp J, Schwede T., Bioinformatics 22(2), 2005
PMID: 16301204
Update on the basic helix-loop-helix transcription factor gene family in Arabidopsis thaliana.
Bailey PC, Martin C, Toledo-Ortiz G, Quail PH, Huq E, Heim MA, Jakoby M, Werber M, Weisshaar B., Plant Cell 15(11), 2003
PMID: 14600211
TT2, TT8, and TTG1 synergistically specify the expression of BANYULS and proanthocyanidin biosynthesis in Arabidopsis thaliana.
Baudry A, Heim MA, Dubreucq B, Caboche M, Weisshaar B, Lepiniec L., Plant J. 39(3), 2004
PMID: 15255866
A plasma membrane H+-ATPase is required for the formation of proanthocyanidins in the seed coat endothelium of Arabidopsis thaliana.
Baxter IR, Young JC, Armstrong G, Foster N, Bogenschutz N, Cordova T, Peer WA, Hazen SP, Murphy AS, Harper JF., Proc. Natl. Acad. Sci. U.S.A. 102(7), 2005
PMID: 15695592
Molecular characterization of transparent testa (tt) mutants of Arabidopsis thaliana (ecotype Estland) impaired in flavonoid biosynthetic pathway
Bharti, Plant Sci. 165(), 2003
Activation tagging identifies a conserved MYB regulator of phenylpropanoid biosynthesis.
Borevitz JO, Xia Y, Blount J, Dixon RA, Lamb C., Plant Cell 12(12), 2000
PMID: 11148285
Influence of the testa on seed dormancy, germination, and longevity in Arabidopsis.
Debeaujon I, Leon-Kloosterziel KM, Koornneef M., Plant Physiol. 122(2), 2000
PMID: 10677433
Proanthocyanidin-accumulating cells in Arabidopsis testa: regulation of differentiation and role in seed development.
Debeaujon I, Nesi N, Perez P, Devic M, Grandjean O, Caboche M, Lepiniec L., Plant Cell 15(11), 2003
PMID: 14555692
Tannin analysis of food products.
Deshpande SS, Cheryan M, Salunkhe DK., Crit Rev Food Sci Nutr 24(4), 1986
PMID: 3536314
Stress-Induced Phenylpropanoid Metabolism.
Dixon RA, Paiva NL., Plant Cell 7(7), 1995
PMID: 12242399
TTG1 complex MYBs, MYB5 and TT2, control outer seed coat differentiation.
Gonzalez A, Mendenhall J, Huo Y, Lloyd A., Dev. Biol. 325(2), 2008
PMID: 18992236
Functional role of anthocyanins in the leaves of Quintinia serrata A. Cunn.
Gould KS, Markham KR, Smith RH, Goris JJ., J. Exp. Bot. 51(347), 2000
PMID: 10948238
The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity.
Heim MA, Jakoby M, Werber M, Martin C, Weisshaar B, Bailey PC., Mol. Biol. Evol. 20(5), 2003
PMID: 12679534
Genevestigator v3: a reference expression database for the meta-analysis of transcriptomes.
Hruz T, Laule O, Szabo G, Wessendorp F, Bleuler S, Oertle L, Widmayer P, Gruissem W, Zimmermann P., Adv Bioinformatics 2008(), 2008
PMID: 19956698
Transcriptional profiling of mature Arabidopsis trichomes reveals that NOECK encodes the MIXTA-like transcriptional regulator MYB106.
Jakoby MJ, Falkenhan D, Mader MT, Brininstool G, Wischnitzki E, Platz N, Hudson A, Hulskamp M, Larkin J, Schnittger A., Plant Physiol. 148(3), 2008
PMID: 18805951
The SWISS-MODEL Repository and associated resources.
Kiefer F, Arnold K, Kunzli M, Bordoli L, Schwede T., Nucleic Acids Res. 37(Database issue), 2008
PMID: 18931379
Metabolic profiling and cytological analysis of proanthocyanidins in immature seeds of Arabidopsis thaliana flavonoid accumulation mutants.
Kitamura S, Matsuda F, Tohge T, Yonekura-Sakakibara K, Yamazaki M, Saito K, Narumi I., Plant J. 62(4), 2010
PMID: 20180920
Mutations affecting the testa colour in Arabidopsis
Koornneef, Arabidopsis Inf. Serv. 27(), 1990
Regulation of Flavonoid Biosynthetic Genes in Germinating Arabidopsis Seedlings.
Kubasek WL, Shirley BW, McKillop A, Goodman HM, Briggs W, Ausubel FM., Plant Cell 4(10), 1992
PMID: 12297632
Genetics and biochemistry of seed flavonoids.
Lepiniec L, Debeaujon I, Routaboul JM, Baudry A, Pourcel L, Nesi N, Caboche M., Annu Rev Plant Biol 57(), 2006
PMID: 16669768
Reverse genetics by fast neutron mutagenesis in higher plants.
Li X, Zhang Y., Funct. Integr. Genomics 2(6), 2002
PMID: 12444418
The Arabidopsis transcription factor MYB12 is a flavonol-specific regulator of phenylpropanoid biosynthesis.
Mehrtens F, Kranz H, Bednarek P, Weisshaar B., Plant Physiol. 138(2), 2005
PMID: 15923334
How genes paint flowers and seeds
Mol, Trends Plant Sci. 3(), 1998
An Arabidopsis thaliana T-DNA mutagenized population (GABI-Kat) for flanking sequence tag-based reverse genetics.
Rosso MG, Li Y, Strizhov N, Reiss B, Dekker K, Weisshaar B., Plant Mol. Biol. 53(1-2), 2003
PMID: 14756321
Flavonoids redirect PIN-mediated polar auxin fluxes during root gravitropic responses.
Santelia D, Henrichs S, Vincenzetti V, Sauer M, Bigler L, Klein M, Bailly A, Lee Y, Friml J, Geisler M, Martinoia E., J. Biol. Chem. 283(45), 2008
PMID: 18718912
Mutation rate and novel tt mutants of Arabidopsis thaliana induced by carbon ions.
Shikazono N, Yokota Y, Kitamura S, Suzuki C, Watanabe H, Tano S, Tanaka A., Genetics 163(4), 2003
PMID: 12702688
Analysis of Arabidopsis mutants deficient in flavonoid biosynthesis.
Shirley BW, Kubasek WL, Storz G, Bruggemann E, Koornneef M, Ausubel FM, Goodman HM., Plant J. 8(5), 1995
PMID: 8528278
Transactivation properties of parsley proline-rich bZIP transcription factors.
Sprenger-Haussels M, Weisshaar B., Plant J. 22(1), 2000
PMID: 10792815
Flavonoids as developmental regulators.
Taylor LP, Grotewold E., Curr. Opin. Plant Biol. 8(3), 2005
PMID: 15860429
Sucrose-specific induction of anthocyanin biosynthesis in Arabidopsis requires the MYB75/PAP1 gene.
Teng S, Keurentjes J, Bentsink L, Koornneef M, Smeekens S., Plant Physiol. 139(4), 2005
PMID: 16299184
Functional genomics by integrated analysis of metabolome and transcriptome of Arabidopsis plants over-expressing an MYB transcription factor.
Tohge T, Nishiyama Y, Hirai MY, Yano M, Nakajima J, Awazuhara M, Inoue E, Takahashi H, Goodenowe DB, Kitayama M, Noji M, Yamazaki M, Saito K., Plant J. 42(2), 2005
PMID: 15807784
Purification, crystallization and preliminary X-ray diffraction of anthocyanidin synthase from Arabidopsis thaliana
Turnbull, Acta Crystallogr., Sect. D: Biol. Crystallogr. 57(), 2001
Phenylpropanoid biosynthesis and its regulation.
Weisshaar B, Jenkins GI., Curr. Opin. Plant Biol. 1(3), 1998
PMID: 10066590
Structure and mechanism of anthocyanidin synthase from Arabidopsis thaliana.
Wilmouth RC, Turnbull JJ, Welford RW, Clifton IJ, Prescott AG, Schofield CJ., Structure 10(1), 2002
PMID: 11796114
Export

Markieren/ Markierung löschen
Markierte Publikationen

Open Data PUB

Web of Science

Dieser Datensatz im Web of Science®
Quellen

PMID: 21683773
PubMed | Europe PMC

Suchen in

Google Scholar