Isolation and linkage analysis of expressed disease-resistance gene analogues of sugar beet (Beta vulgaris L.)
Hunger S, Di Gaspero G, Mohring S, Bellin D, Schafer-Pregl R, Borchardt DC, Durel C-E, Werber M, Weisshaar B, Salamini F, Schneider K (2003)
Genome 46(1): 70-82.
Zeitschriftenaufsatz
| Veröffentlicht | Englisch
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Autor*in
Hunger, Sandra;
Di Gaspero, Gabriele;
Mohring, Slike;
Bellin, Diana;
Schafer-Pregl, Ralf;
Borchardt, Dietrich C;
Durel, Charles-Eric;
Werber, Martin;
Weisshaar, BerndUniBi 
;
Salamini, Francesco;
Schneider, Katharina
;
Salamini, Francesco;
Schneider, KatharinaEinrichtung
Abstract / Bemerkung
Sequence conservation among resistance genes (R genes) was exploited to identify 47 R gene analogues (RGAs) from sugar beet (Beta vulgaris L.). Using degenerate primers, 11 RGAs were amplified from genomic DNA and 7 from leaf or beet cDNA. Twenty-nine were selected from an EST sequencing program. Twenty-one RGAs contained structures similar to the nucleotide binding site (NBS)--leucine rich repeat (LRR) domain, a motif commonly found in several R genes. Among the remaining RGAs, 19 revealed similarity to the serine (threonine) protein kinase domain of R genes, 4 showed features related to the LRR region of the rice disease resistance gene Xa21, 1 RGA resembled the sugar beet nematode resistance gene Hs1pro-1, and 2 had homologies to other gene products associated with disease resistance. For 20 EST-derived RGAs, transcript levels were compared in leaf and root tissue revealing organ-specific transcription in 7 cases. Thirty-three RGAs were spread over all nine sugar beet chromosomes, except for a cluster of nine closely linked RGAs on chromosome 7. The analysis of linkage between RGAs and loci for rhizomania and Cercospora resistance identified alleles associated with resistance in both cases.
Erscheinungsjahr
2003
Zeitschriftentitel
Genome
Band
46
Ausgabe
1
Seite(n)
70-82
ISSN
0831-2796
eISSN
1480-3321
Page URI
https://pub.uni-bielefeld.de/record/1990229
Zitieren
Hunger S, Di Gaspero G, Mohring S, et al. Isolation and linkage analysis of expressed disease-resistance gene analogues of sugar beet (Beta vulgaris L.). Genome. 2003;46(1):70-82.
Hunger, S., Di Gaspero, G., Mohring, S., Bellin, D., Schafer-Pregl, R., Borchardt, D. C., Durel, C. - E., et al. (2003). Isolation and linkage analysis of expressed disease-resistance gene analogues of sugar beet (Beta vulgaris L.). Genome, 46(1), 70-82. https://doi.org/10.1139/g02-106
Hunger, Sandra, Di Gaspero, Gabriele, Mohring, Slike, Bellin, Diana, Schafer-Pregl, Ralf, Borchardt, Dietrich C, Durel, Charles-Eric, et al. 2003. “Isolation and linkage analysis of expressed disease-resistance gene analogues of sugar beet (Beta vulgaris L.)”. Genome 46 (1): 70-82.
Hunger, S., Di Gaspero, G., Mohring, S., Bellin, D., Schafer-Pregl, R., Borchardt, D. C., Durel, C. - E., Werber, M., Weisshaar, B., Salamini, F., et al. (2003). Isolation and linkage analysis of expressed disease-resistance gene analogues of sugar beet (Beta vulgaris L.). Genome 46, 70-82.
Hunger, S., et al., 2003. Isolation and linkage analysis of expressed disease-resistance gene analogues of sugar beet (Beta vulgaris L.). Genome, 46(1), p 70-82.
S. Hunger, et al., “Isolation and linkage analysis of expressed disease-resistance gene analogues of sugar beet (Beta vulgaris L.)”, Genome, vol. 46, 2003, pp. 70-82.
Hunger, S., Di Gaspero, G., Mohring, S., Bellin, D., Schafer-Pregl, R., Borchardt, D.C., Durel, C.-E., Werber, M., Weisshaar, B., Salamini, F., Schneider, K.: Isolation and linkage analysis of expressed disease-resistance gene analogues of sugar beet (Beta vulgaris L.). Genome. 46, 70-82 (2003).
Hunger, Sandra, Di Gaspero, Gabriele, Mohring, Slike, Bellin, Diana, Schafer-Pregl, Ralf, Borchardt, Dietrich C, Durel, Charles-Eric, Werber, Martin, Weisshaar, Bernd, Salamini, Francesco, and Schneider, Katharina. “Isolation and linkage analysis of expressed disease-resistance gene analogues of sugar beet (Beta vulgaris L.)”. Genome 46.1 (2003): 70-82.
Daten bereitgestellt von European Bioinformatics Institute (EBI)
INTERPRO
2 Einträge gefunden, die diesen Artikel zitieren
HSPRO1_N (INTERPRO: IPR009869)
Protein family/domain name: Nematode resistance protein-like HSPRO1, N-terminal
Protein family/domain name: Nematode resistance protein-like HSPRO1, N-terminal
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