Quantitative determination of metabolic fluxes during coutilization of two carbon sources: Comparative analyses with corynebacterium glutamicum during growth on acetate and/or glucose
Wendisch VF, De Graaf AA, Sahm H, Eikmanns BJ (2000)
Journal of Bacteriology 182(11): 3088-3096.
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Autor*in
Wendisch, Volker F.UniBi ;
De Graaf, A. A.;
Sahm, H.;
Eikmanns, B. J.
Einrichtung
Abstract / Bemerkung
Growth of Corynebacterium glutamicum on mixtures of the carbon sources glucose and acetate is shown to be distinct from growth on either substrate alone. The organism showed nondiauxic growth on media containing acetate-glucose mixtures and simultaneously metabolized these substrates. Compared to those for growth on acetate or glucose alone, the consumption rates of the individual substrates were reduced during acetate-glucose cometabolism, resulting in similar total carbon consumption rates for the three conditions. By C-13-labeling experiments with subsequent nuclear magnetic resonance analyses in combination with metabolite balancing, the in vivo activities for pathways or single enzymes in the central metabolism of C. glatamicum were quantified for growth on acetate, on glucose, and on both carbon sources. The activity of the citric acid cycle was high on acetate, intermediate on acetate plus glucose, and low on glucose, corresponding to in vivo activities of citrate synthase of 413, 219, and 111 nmol (mg of protein)(-1) min(-1), respectively. The citric acid cycle was replenished by carboxylation of phosphoenolpyruvate (PEP) and/or pyruvate (30 nmol [mg of protein](-1) min(-1)) during growth on glucose. Although levels of PEP carboxylase and pyruvate carboxylase during growth on acetate were similar to those for growth on glucose, anaplerosis occurred solely by the glyoxylate cycle (99 nmol [mg of protein](-1) min(-1)). Surprisingly, the anaplerotic function was fulfilled completely by the glyoxylate cycle (50 nmol [mg of protein](-1) min(-1)) on glucose plus acetate also. Consistent with the predictions deduced from the metabolic flux analyses, a glyoxylate cycle-deficient mutant of C. glutamicum, constructed by targeted deletion of the isocitrate lyase and malate synthase genes, exhibited impaired growth on acetate-glucose mixtures.
Stichworte
pyruvate-carboxylase;
isocitrate dehydrogenase;
escherichia-coli;
phosphoenolpyruvate carboxylase;
nuclear-magnetic-resonance;
tricarboxylic-acid cycle;
sequence-analysis;
bidirectional reaction steps;
biochemical-characterization;
azotobacter-vinelandii
Erscheinungsjahr
2000
Zeitschriftentitel
Journal of Bacteriology
Band
182
Ausgabe
11
Seite(n)
3088-3096
ISSN
0021-9193
Page URI
https://pub.uni-bielefeld.de/record/1895373
Zitieren
Wendisch VF, De Graaf AA, Sahm H, Eikmanns BJ. Quantitative determination of metabolic fluxes during coutilization of two carbon sources: Comparative analyses with corynebacterium glutamicum during growth on acetate and/or glucose. Journal of Bacteriology. 2000;182(11):3088-3096.
Wendisch, V. F., De Graaf, A. A., Sahm, H., & Eikmanns, B. J. (2000). Quantitative determination of metabolic fluxes during coutilization of two carbon sources: Comparative analyses with corynebacterium glutamicum during growth on acetate and/or glucose. Journal of Bacteriology, 182(11), 3088-3096. https://doi.org/10.1128/JB.182.11.3088-3096.2000
Wendisch, Volker F., De Graaf, A. A., Sahm, H., and Eikmanns, B. J. 2000. “Quantitative determination of metabolic fluxes during coutilization of two carbon sources: Comparative analyses with corynebacterium glutamicum during growth on acetate and/or glucose”. Journal of Bacteriology 182 (11): 3088-3096.
Wendisch, V. F., De Graaf, A. A., Sahm, H., and Eikmanns, B. J. (2000). Quantitative determination of metabolic fluxes during coutilization of two carbon sources: Comparative analyses with corynebacterium glutamicum during growth on acetate and/or glucose. Journal of Bacteriology 182, 3088-3096.
Wendisch, V.F., et al., 2000. Quantitative determination of metabolic fluxes during coutilization of two carbon sources: Comparative analyses with corynebacterium glutamicum during growth on acetate and/or glucose. Journal of Bacteriology, 182(11), p 3088-3096.
V.F. Wendisch, et al., “Quantitative determination of metabolic fluxes during coutilization of two carbon sources: Comparative analyses with corynebacterium glutamicum during growth on acetate and/or glucose”, Journal of Bacteriology, vol. 182, 2000, pp. 3088-3096.
Wendisch, V.F., De Graaf, A.A., Sahm, H., Eikmanns, B.J.: Quantitative determination of metabolic fluxes during coutilization of two carbon sources: Comparative analyses with corynebacterium glutamicum during growth on acetate and/or glucose. Journal of Bacteriology. 182, 3088-3096 (2000).
Wendisch, Volker F., De Graaf, A. A., Sahm, H., and Eikmanns, B. J. “Quantitative determination of metabolic fluxes during coutilization of two carbon sources: Comparative analyses with corynebacterium glutamicum during growth on acetate and/or glucose”. Journal of Bacteriology 182.11 (2000): 3088-3096.
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Control of adhA and sucR expression by the SucR regulator in Corynebacterium glutamicum.
Auchter M, Laslo T, Fleischer C, Schiller L, Arndt A, Gaigalat L, Kalinowski J, Eikmanns BJ., J Biotechnol 152(3), 2011
PMID: 21320555
Auchter M, Laslo T, Fleischer C, Schiller L, Arndt A, Gaigalat L, Kalinowski J, Eikmanns BJ., J Biotechnol 152(3), 2011
PMID: 21320555
Genome-wide identification of in vivo binding sites of GlxR, a cyclic AMP receptor protein-type regulator in Corynebacterium glutamicum.
Toyoda K, Teramoto H, Inui M, Yukawa H., J Bacteriol 193(16), 2011
PMID: 21665967
Toyoda K, Teramoto H, Inui M, Yukawa H., J Bacteriol 193(16), 2011
PMID: 21665967
Amino acid production from rice straw and wheat bran hydrolysates by recombinant pentose-utilizing Corynebacterium glutamicum.
Gopinath V, Meiswinkel TM, Wendisch VF, Nampoothiri KM., Appl Microbiol Biotechnol 92(5), 2011
PMID: 21796382
Gopinath V, Meiswinkel TM, Wendisch VF, Nampoothiri KM., Appl Microbiol Biotechnol 92(5), 2011
PMID: 21796382
Increased glucose utilization in Corynebacterium glutamicum by use of maltose, and its application for the improvement of L-valine productivity.
Krause FS, Henrich A, Blombach B, Krämer R, Eikmanns BJ, Seibold GM., Appl Environ Microbiol 76(1), 2010
PMID: 19880641
Krause FS, Henrich A, Blombach B, Krämer R, Eikmanns BJ, Seibold GM., Appl Environ Microbiol 76(1), 2010
PMID: 19880641
Studies on substrate utilisation in L-valine-producing Corynebacterium glutamicum strains deficient in pyruvate dehydrogenase complex.
Bartek T, Rudolf C, Kerssen U, Klein B, Blombach B, Lang S, Eikmanns BJ, Oldiges M., Bioprocess Biosyst Eng 33(7), 2010
PMID: 20204663
Bartek T, Rudolf C, Kerssen U, Klein B, Blombach B, Lang S, Eikmanns BJ, Oldiges M., Bioprocess Biosyst Eng 33(7), 2010
PMID: 20204663
Metabolic fluxes and beyond-systems biology understanding and engineering of microbial metabolism.
Kohlstedt M, Becker J, Wittmann C., Appl Microbiol Biotechnol 88(5), 2010
PMID: 20821203
Kohlstedt M, Becker J, Wittmann C., Appl Microbiol Biotechnol 88(5), 2010
PMID: 20821203
Metabolomics of Mycobacterium tuberculosis reveals compartmentalized co-catabolism of carbon substrates.
de Carvalho LP, Fischer SM, Marrero J, Nathan C, Ehrt S, Rhee KY., Chem Biol 17(10), 2010
PMID: 21035735
de Carvalho LP, Fischer SM, Marrero J, Nathan C, Ehrt S, Rhee KY., Chem Biol 17(10), 2010
PMID: 21035735
Metabolic engineering of Corynebacterium glutamicum for 2-ketoisovalerate production.
Krause FS, Blombach B, Eikmanns BJ., Appl Environ Microbiol 76(24), 2010
PMID: 20935122
Krause FS, Blombach B, Eikmanns BJ., Appl Environ Microbiol 76(24), 2010
PMID: 20935122
A kinetic platform for in silico modeling of the metabolic dynamics in Escherichia coli.
Barve A, Gupta A, Solapure SM, Kumar A, Ramachandran V, Seshadri K, Vali S, Datta S., Adv Appl Bioinform Chem 3(), 2010
PMID: 21918631
Barve A, Gupta A, Solapure SM, Kumar A, Ramachandran V, Seshadri K, Vali S, Datta S., Adv Appl Bioinform Chem 3(), 2010
PMID: 21918631
Dual transcriptional control of the acetaldehyde dehydrogenase gene ald of Corynebacterium glutamicum by RamA and RamB.
Auchter M, Arndt A, Eikmanns BJ., J Biotechnol 140(1-2), 2009
PMID: 19041911
Auchter M, Arndt A, Eikmanns BJ., J Biotechnol 140(1-2), 2009
PMID: 19041911
Identification and characterization of a bacterial transport system for the uptake of pyruvate, propionate, and acetate in Corynebacterium glutamicum.
Jolkver E, Emer D, Ballan S, Krämer R, Eikmanns BJ, Marin K., J Bacteriol 191(3), 2009
PMID: 19028892
Jolkver E, Emer D, Ballan S, Krämer R, Eikmanns BJ, Marin K., J Bacteriol 191(3), 2009
PMID: 19028892
Complex expression control of the Corynebacterium glutamicum aconitase gene: identification of RamA as a third transcriptional regulator besides AcnR and RipA.
Emer D, Krug A, Eikmanns BJ, Bott M., J Biotechnol 140(1-2), 2009
PMID: 19095019
Emer D, Krug A, Eikmanns BJ, Bott M., J Biotechnol 140(1-2), 2009
PMID: 19095019
L-valine production during growth of pyruvate dehydrogenase complex-deficient Corynebacterium glutamicum in the presence of ethanol or by inactivation of the transcriptional regulator SugR.
Blombach B, Arndt A, Auchter M, Eikmanns BJ., Appl Environ Microbiol 75(4), 2009
PMID: 19088318
Blombach B, Arndt A, Auchter M, Eikmanns BJ., Appl Environ Microbiol 75(4), 2009
PMID: 19088318
Pathway identification combining metabolic flux and functional genomics analyses: acetate and propionate activation by Corynebacterium glutamicum.
Veit A, Rittmann D, Georgi T, Youn JW, Eikmanns BJ, Wendisch VF., J Biotechnol 140(1-2), 2009
PMID: 19162097
Veit A, Rittmann D, Georgi T, Youn JW, Eikmanns BJ, Wendisch VF., J Biotechnol 140(1-2), 2009
PMID: 19162097
In silico genome-scale reconstruction and validation of the Corynebacterium glutamicum metabolic network.
Kjeldsen KR, Nielsen J., Biotechnol Bioeng 102(2), 2009
PMID: 18985611
Kjeldsen KR, Nielsen J., Biotechnol Bioeng 102(2), 2009
PMID: 18985611
Exopolyphosphatases PPX1 and PPX2 from Corynebacterium glutamicum.
Lindner SN, Knebel S, Wesseling H, Schoberth SM, Wendisch VF., Appl Environ Microbiol 75(10), 2009
PMID: 19304823
Lindner SN, Knebel S, Wesseling H, Schoberth SM, Wendisch VF., Appl Environ Microbiol 75(10), 2009
PMID: 19304823
Identification and functional analysis of the gene cluster for L-arabinose utilization in Corynebacterium glutamicum.
Kawaguchi H, Sasaki M, Vertès AA, Inui M, Yukawa H., Appl Environ Microbiol 75(11), 2009
PMID: 19346355
Kawaguchi H, Sasaki M, Vertès AA, Inui M, Yukawa H., Appl Environ Microbiol 75(11), 2009
PMID: 19346355
Citrate utilization by Corynebacterium glutamicum is controlled by the CitAB two-component system through positive regulation of the citrate transport genes citH and tctCBA.
Brocker M, Schaffer S, Mack C, Bott M., J Bacteriol 191(12), 2009
PMID: 19376865
Brocker M, Schaffer S, Mack C, Bott M., J Bacteriol 191(12), 2009
PMID: 19376865
Regulation of expression of genes involved in quinate and shikimate utilization in Corynebacterium glutamicum.
Teramoto H, Inui M, Yukawa H., Appl Environ Microbiol 75(11), 2009
PMID: 19376919
Teramoto H, Inui M, Yukawa H., Appl Environ Microbiol 75(11), 2009
PMID: 19376919
Identification of a second beta-glucoside phosphoenolpyruvate: carbohydrate phosphotransferase system in Corynebacterium glutamicum R.
Tanaka Y, Teramoto H, Inui M, Yukawa H., Microbiology 155(pt 11), 2009
PMID: 19628558
Tanaka Y, Teramoto H, Inui M, Yukawa H., Microbiology 155(pt 11), 2009
PMID: 19628558
Visualizing post genomics data-sets on customized pathway maps by ProMeTra-aeration-dependent gene expression and metabolism of Corynebacterium glutamicum as an example.
Neuweger H, Persicke M, Albaum SP, Bekel T, Dondrup M, Hüser AT, Winnebald J, Schneider J, Kalinowski J, Goesmann A., BMC Syst Biol 3(), 2009
PMID: 19698148
Neuweger H, Persicke M, Albaum SP, Bekel T, Dondrup M, Hüser AT, Winnebald J, Schneider J, Kalinowski J, Goesmann A., BMC Syst Biol 3(), 2009
PMID: 19698148
Metabolic fluxes in the central carbon metabolism of Dinoroseobacter shibae and Phaeobacter gallaeciensis, two members of the marine Roseobacter clade.
Fürch T, Preusse M, Tomasch J, Zech H, Wagner-Döbler I, Rabus R, Wittmann C., BMC Microbiol 9(), 2009
PMID: 19788729
Fürch T, Preusse M, Tomasch J, Zech H, Wagner-Döbler I, Rabus R, Wittmann C., BMC Microbiol 9(), 2009
PMID: 19788729
Regulation of L-lactate utilization by the FadR-type regulator LldR of Corynebacterium glutamicum.
Georgi T, Engels V, Wendisch VF., J Bacteriol 190(3), 2008
PMID: 18039772
Georgi T, Engels V, Wendisch VF., J Bacteriol 190(3), 2008
PMID: 18039772
Co-ordinated regulation of gluconate catabolism and glucose uptake in Corynebacterium glutamicum by two functionally equivalent transcriptional regulators, GntR1 and GntR2.
Frunzke J, Engels V, Hasenbein S, Gätgens C, Bott M., Mol Microbiol 67(2), 2008
PMID: 18047570
Frunzke J, Engels V, Hasenbein S, Gätgens C, Bott M., Mol Microbiol 67(2), 2008
PMID: 18047570
The LacI/GalR family transcriptional regulator UriR negatively controls uridine utilization of Corynebacterium glutamicum by binding to catabolite-responsive element (cre)-like sequences.
Brinkrolf K, Plöger S, Solle S, Brune I, Nentwich SS, Hüser AT, Kalinowski J, Pühler A, Tauch A., Microbiology 154(pt 4), 2008
PMID: 18375800
Brinkrolf K, Plöger S, Solle S, Brune I, Nentwich SS, Hüser AT, Kalinowski J, Pühler A, Tauch A., Microbiology 154(pt 4), 2008
PMID: 18375800
Function and transcriptional regulation of the isocitrate lyase in Pseudomonas aeruginosa.
Kretzschmar U, Khodaverdi V, Jeoung JH, Görisch H., Arch Microbiol 190(2), 2008
PMID: 18574579
Kretzschmar U, Khodaverdi V, Jeoung JH, Görisch H., Arch Microbiol 190(2), 2008
PMID: 18574579
Identification and characterization of the dicarboxylate uptake system DccT in Corynebacterium glutamicum.
Youn JW, Jolkver E, Krämer R, Marin K, Wendisch VF., J Bacteriol 190(19), 2008
PMID: 18658264
Youn JW, Jolkver E, Krämer R, Marin K, Wendisch VF., J Bacteriol 190(19), 2008
PMID: 18658264
Carbon catabolite repression in bacteria: many ways to make the most out of nutrients.
Görke B, Stülke J., Nat Rev Microbiol 6(8), 2008
PMID: 18628769
Görke B, Stülke J., Nat Rev Microbiol 6(8), 2008
PMID: 18628769
Engineering of a glycerol utilization pathway for amino acid production by Corynebacterium glutamicum.
Rittmann D, Lindner SN, Wendisch VF., Appl Environ Microbiol 74(20), 2008
PMID: 18757581
Rittmann D, Lindner SN, Wendisch VF., Appl Environ Microbiol 74(20), 2008
PMID: 18757581
Anaerobic glyoxylate cycle activity during simultaneous utilization of glycogen and acetate in uncultured Accumulibacter enriched in enhanced biological phosphorus removal communities.
Burow LC, Mabbett AN, Blackall LL., ISME J 2(10), 2008
PMID: 18784756
Burow LC, Mabbett AN, Blackall LL., ISME J 2(10), 2008
PMID: 18784756
Effect of carbon source availability and growth phase on expression of Corynebacterium glutamicum genes involved in the tricarboxylic acid cycle and glyoxylate bypass.
Han SO, Inui M, Yukawa H., Microbiology 154(pt 10), 2008
PMID: 18832313
Han SO, Inui M, Yukawa H., Microbiology 154(pt 10), 2008
PMID: 18832313
The global repressor SugR controls expression of genes of glycolysis and of the L-lactate dehydrogenase LdhA in Corynebacterium glutamicum.
Engels V, Lindner SN, Wendisch VF., J Bacteriol 190(24), 2008
PMID: 18849435
Engels V, Lindner SN, Wendisch VF., J Bacteriol 190(24), 2008
PMID: 18849435
Structural and functional characterization of the LldR from Corynebacterium glutamicum: a transcriptional repressor involved in L-lactate and sugar utilization.
Gao YG, Suzuki H, Itou H, Zhou Y, Tanaka Y, Wachi M, Watanabe N, Tanaka I, Yao M., Nucleic Acids Res 36(22), 2008
PMID: 18988622
Gao YG, Suzuki H, Itou H, Zhou Y, Tanaka Y, Wachi M, Watanabe N, Tanaka I, Yao M., Nucleic Acids Res 36(22), 2008
PMID: 18988622
Determining Actinobacillus succinogenes metabolic pathways and fluxes by NMR and GC-MS analyses of 13C-labeled metabolic product isotopomers.
McKinlay JB, Shachar-Hill Y, Zeikus JG, Vieille C., Metab Eng 9(2), 2007
PMID: 17197218
McKinlay JB, Shachar-Hill Y, Zeikus JG, Vieille C., Metab Eng 9(2), 2007
PMID: 17197218
The phosphotransferase system of Corynebacterium glutamicum: features of sugar transport and carbon regulation.
Moon MW, Park SY, Choi SK, Lee JK., J Mol Microbiol Biotechnol 12(1-2), 2007
PMID: 17183210
Moon MW, Park SY, Choi SK, Lee JK., J Mol Microbiol Biotechnol 12(1-2), 2007
PMID: 17183210
Effect of elevated dissolved carbon dioxide concentrations on growth of Corynebacterium glutamicum on D-glucose and L-lactate.
Bäumchen C, Knoll A, Husemann B, Seletzky J, Maier B, Dietrich C, Amoabediny G, Büchs J., J Biotechnol 128(4), 2007
PMID: 17275119
Bäumchen C, Knoll A, Husemann B, Seletzky J, Maier B, Dietrich C, Amoabediny G, Büchs J., J Biotechnol 128(4), 2007
PMID: 17275119
The DeoR-type regulator SugR represses expression of ptsG in Corynebacterium glutamicum.
Engels V, Wendisch VF., J Bacteriol 189(8), 2007
PMID: 17293426
Engels V, Wendisch VF., J Bacteriol 189(8), 2007
PMID: 17293426
L-valine production with pyruvate dehydrogenase complex-deficient Corynebacterium glutamicum.
Blombach B, Schreiner ME, Holátko J, Bartek T, Oldiges M, Eikmanns BJ., Appl Environ Microbiol 73(7), 2007
PMID: 17293513
Blombach B, Schreiner ME, Holátko J, Bartek T, Oldiges M, Eikmanns BJ., Appl Environ Microbiol 73(7), 2007
PMID: 17293513
Investigation of central carbon metabolism and the 2-methylcitrate cycle in Corynebacterium glutamicum by metabolic profiling using gas chromatography-mass spectrometry.
Plassmeier J, Barsch A, Persicke M, Niehaus K, Kalinowski J., J Biotechnol 130(4), 2007
PMID: 17586079
Plassmeier J, Barsch A, Persicke M, Niehaus K, Kalinowski J., J Biotechnol 130(4), 2007
PMID: 17586079
NCgl2620 encodes a class II polyphosphate kinase in Corynebacterium glutamicum.
Lindner SN, Vidaurre D, Willbold S, Schoberth SM, Wendisch VF., Appl Environ Microbiol 73(15), 2007
PMID: 17545325
Lindner SN, Vidaurre D, Willbold S, Schoberth SM, Wendisch VF., Appl Environ Microbiol 73(15), 2007
PMID: 17545325
Study on roles of anaplerotic pathways in glutamate overproduction of Corynebacterium glutamicum by metabolic flux analysis.
Shirai T, Fujimura K, Furusawa C, Nagahisa K, Shioya S, Shimizu H., Microb Cell Fact 6(), 2007
PMID: 17587457
Shirai T, Fujimura K, Furusawa C, Nagahisa K, Shioya S, Shimizu H., Microb Cell Fact 6(), 2007
PMID: 17587457
The alcohol dehydrogenase gene adhA in Corynebacterium glutamicum is subject to carbon catabolite repression.
Arndt A, Eikmanns BJ., J Bacteriol 189(20), 2007
PMID: 17693518
Arndt A, Eikmanns BJ., J Bacteriol 189(20), 2007
PMID: 17693518
Offering surprises: TCA cycle regulation in Corynebacterium glutamicum.
Bott M., Trends Microbiol 15(9), 2007
PMID: 17764950
Bott M., Trends Microbiol 15(9), 2007
PMID: 17764950
Carbon metabolism of intracellular bacteria.
Muñoz-Elías EJ, McKinney JD., Cell Microbiol 8(1), 2006
PMID: 16367862
Muñoz-Elías EJ, McKinney JD., Cell Microbiol 8(1), 2006
PMID: 16367862
Emerging Corynebacterium glutamicum systems biology.
Wendisch VF, Bott M, Kalinowski J, Oldiges M, Wiechert W., J Biotechnol 124(1), 2006
PMID: 16406159
Wendisch VF, Bott M, Kalinowski J, Oldiges M, Wiechert W., J Biotechnol 124(1), 2006
PMID: 16406159
Control of carbon flux through enzymes of central and intermediary metabolism during growth of Escherichia coli on acetate.
El-Mansi M, Cozzone AJ, Shiloach J, Eikmanns BJ., Curr Opin Microbiol 9(2), 2006
PMID: 16530464
El-Mansi M, Cozzone AJ, Shiloach J, Eikmanns BJ., Curr Opin Microbiol 9(2), 2006
PMID: 16530464
On-line optimization of glutamate production based on balanced metabolic control by RQ.
Xiao J, Shi Z, Gao P, Feng H, Duan Z, Mao Z., Bioprocess Biosyst Eng 29(2), 2006
PMID: 16614826
Xiao J, Shi Z, Gao P, Feng H, Duan Z, Mao Z., Bioprocess Biosyst Eng 29(2), 2006
PMID: 16614826
Metabolic activity of Corynebacterium glutamicum grown on L: -lactic acid under stress.
Seletzky JM, Noack U, Fricke J, Hahn S, Büchs J., Appl Microbiol Biotechnol 72(6), 2006
PMID: 16642330
Seletzky JM, Noack U, Fricke J, Hahn S, Büchs J., Appl Microbiol Biotechnol 72(6), 2006
PMID: 16642330
Markov Chain Monte Carlo Algorithm based metabolic flux distribution analysis on Corynebacterium glutamicum.
Kadirkamanathan V, Yang J, Billings SA, Wright PC., Bioinformatics 22(21), 2006
PMID: 16940326
Kadirkamanathan V, Yang J, Billings SA, Wright PC., Bioinformatics 22(21), 2006
PMID: 16940326
Precise metabolic flux analysis of coryneform bacteria by gas chromatography-mass spectrometry and verification by nuclear magnetic resonance.
Shirai T, Matsuzaki K, Kuzumoto M, Nagahisa K, Furusawa C, Shioya S, Shimizu H., J Biosci Bioeng 102(5), 2006
PMID: 17189168
Shirai T, Matsuzaki K, Kuzumoto M, Nagahisa K, Furusawa C, Shioya S, Shimizu H., J Biosci Bioeng 102(5), 2006
PMID: 17189168
The PEP-pyruvate-oxaloacetate node as the switch point for carbon flux distribution in bacteria.
Sauer U, Eikmanns BJ., FEMS Microbiol Rev 29(4), 2005
PMID: 16102602
Sauer U, Eikmanns BJ., FEMS Microbiol Rev 29(4), 2005
PMID: 16102602
Theoretical aspects of 13C metabolic flux analysis with sole quantification of carbon dioxide labeling.
Yang TH, Heinzle E, Wittmann C., Comput Biol Chem 29(2), 2005
PMID: 15833440
Yang TH, Heinzle E, Wittmann C., Comput Biol Chem 29(2), 2005
PMID: 15833440
Mycobacterium tuberculosis isocitrate lyases 1 and 2 are jointly required for in vivo growth and virulence.
Muñoz-Elías EJ, McKinney JD., Nat Med 11(6), 2005
PMID: 15895072
Muñoz-Elías EJ, McKinney JD., Nat Med 11(6), 2005
PMID: 15895072
Lysine and glutamate production by Corynebacterium glutamicum on glucose, fructose and sucrose: roles of malic enzyme and fructose-1,6-bisphosphatase.
Georgi T, Rittmann D, Wendisch VF., Metab Eng 7(4), 2005
PMID: 15979917
Georgi T, Rittmann D, Wendisch VF., Metab Eng 7(4), 2005
PMID: 15979917
The AraC-type regulator RipA represses aconitase and other iron proteins from Corynebacterium under iron limitation and is itself repressed by DtxR.
Wennerhold J, Krug A, Bott M., J Biol Chem 280(49), 2005
PMID: 16179344
Wennerhold J, Krug A, Bott M., J Biol Chem 280(49), 2005
PMID: 16179344
Manipulating corynebacteria, from individual genes to chromosomes.
Vertès AA, Inui M, Yukawa H., Appl Environ Microbiol 71(12), 2005
PMID: 16332735
Vertès AA, Inui M, Yukawa H., Appl Environ Microbiol 71(12), 2005
PMID: 16332735
Comparative metabolic flux analysis of lysine-producing Corynebacterium glutamicum cultured on glucose or fructose.
Kiefer P, Heinzle E, Zelder O, Wittmann C., Appl Environ Microbiol 70(1), 2004
PMID: 14711646
Kiefer P, Heinzle E, Zelder O, Wittmann C., Appl Environ Microbiol 70(1), 2004
PMID: 14711646
Corynebacterium glutamicum glyceraldehyde-3-phosphate dehydrogenase isoforms with opposite, ATP-dependent regulation.
Omumasaba CA, Okai N, Inui M, Yukawa H., J Mol Microbiol Biotechnol 8(2), 2004
PMID: 15925900
Omumasaba CA, Okai N, Inui M, Yukawa H., J Mol Microbiol Biotechnol 8(2), 2004
PMID: 15925900
High-throughput phenomics: experimental methods for mapping fluxomes.
Sauer U., Curr Opin Biotechnol 15(1), 2004
PMID: 15102468
Sauer U., Curr Opin Biotechnol 15(1), 2004
PMID: 15102468
In-depth profiling of lysine-producing Corynebacterium glutamicum by combined analysis of the transcriptome, metabolome, and fluxome.
Krömer JO, Sorgenfrei O, Klopprogge K, Heinzle E, Wittmann C., J Bacteriol 186(6), 2004
PMID: 14996808
Krömer JO, Sorgenfrei O, Klopprogge K, Heinzle E, Wittmann C., J Bacteriol 186(6), 2004
PMID: 14996808
Roles of pyruvate kinase and malic enzyme in Corynebacterium glutamicum for growth on carbon sources requiring gluconeogenesis.
Netzer R, Krause M, Rittmann D, Peters-Wendisch PG, Eggeling L, Wendisch VF, Sahm H., Arch Microbiol 182(5), 2004
PMID: 15375646
Netzer R, Krause M, Rittmann D, Peters-Wendisch PG, Eggeling L, Wendisch VF, Sahm H., Arch Microbiol 182(5), 2004
PMID: 15375646
Cometabolism of a nongrowth substrate: L-serine utilization by Corynebacterium glutamicum.
Netzer R, Peters-Wendisch P, Eggeling L, Sahm H., Appl Environ Microbiol 70(12), 2004
PMID: 15574911
Netzer R, Peters-Wendisch P, Eggeling L, Sahm H., Appl Environ Microbiol 70(12), 2004
PMID: 15574911
Metabolic fluxes in Corynebacterium glutamicum during lysine production with sucrose as carbon source.
Wittmann C, Kiefer P, Zelder O., Appl Environ Microbiol 70(12), 2004
PMID: 15574927
Wittmann C, Kiefer P, Zelder O., Appl Environ Microbiol 70(12), 2004
PMID: 15574927
Metabolic flux profiling of Escherichia coli mutants in central carbon metabolism using GC-MS.
Fischer E, Sauer U., Eur J Biochem 270(5), 2003
PMID: 12603321
Fischer E, Sauer U., Eur J Biochem 270(5), 2003
PMID: 12603321
Production process monitoring by serial mapping of microbial carbon flux distributions using a novel Sensor Reactor approach: II--(13)C-labeling-based metabolic flux analysis and L-lysine production.
Drysch A, El Massaoudi M, Mack C, Takors R, de Graaf AA, Sahm H., Metab Eng 5(2), 2003
PMID: 12850132
Drysch A, El Massaoudi M, Mack C, Takors R, de Graaf AA, Sahm H., Metab Eng 5(2), 2003
PMID: 12850132
Metabolic networks of microbial systems.
Bhattacharya S, Chakrabarti S, Nayak A, Bhattacharya SK., Microb Cell Fact 2(1), 2003
PMID: 12740044
Bhattacharya S, Chakrabarti S, Nayak A, Bhattacharya SK., Microb Cell Fact 2(1), 2003
PMID: 12740044
Acetate metabolism and its regulation in Corynebacterium glutamicum.
Gerstmeir R, Wendisch VF, Schnicke S, Ruan H, Farwick M, Reinscheid D, Eikmanns BJ., J Biotechnol 104(1-3), 2003
PMID: 12948633
Gerstmeir R, Wendisch VF, Schnicke S, Ruan H, Farwick M, Reinscheid D, Eikmanns BJ., J Biotechnol 104(1-3), 2003
PMID: 12948633
Lysine synthesis control in Corynebacterium glutamicum RC 115 in mixed substrate (glucose-acetate) medium.
Paegle L, Ruklisha M., J Biotechnol 104(1-3), 2003
PMID: 12948634
Paegle L, Ruklisha M., J Biotechnol 104(1-3), 2003
PMID: 12948634
Analysis of Escherichia coli anaplerotic metabolism and its regulation mechanisms from the metabolic responses to altered dilution rates and phosphoenolpyruvate carboxykinase knockout.
Yang C, Hua Q, Baba T, Mori H, Shimizu K., Biotechnol Bioeng 84(2), 2003
PMID: 12966569
Yang C, Hua Q, Baba T, Mori H, Shimizu K., Biotechnol Bioeng 84(2), 2003
PMID: 12966569
Responses of the central metabolism in Escherichia coli to phosphoglucose isomerase and glucose-6-phosphate dehydrogenase knockouts.
Hua Q, Yang C, Baba T, Mori H, Shimizu K., J Bacteriol 185(24), 2003
PMID: 14645264
Hua Q, Yang C, Baba T, Mori H, Shimizu K., J Bacteriol 185(24), 2003
PMID: 14645264
Development of a Corynebacterium glutamicum DNA microarray and validation by genome-wide expression profiling during growth with propionate as carbon source.
Hüser AT, Becker A, Brune I, Dondrup M, Kalinowski J, Plassmeier J, Pühler A, Wiegräbe I, Tauch A., J Biotechnol 106(2-3), 2003
PMID: 14651867
Hüser AT, Becker A, Brune I, Dondrup M, Kalinowski J, Plassmeier J, Pühler A, Wiegräbe I, Tauch A., J Biotechnol 106(2-3), 2003
PMID: 14651867
Identification of two prpDBC gene clusters in Corynebacterium glutamicum and their involvement in propionate degradation via the 2-methylcitrate cycle.
Claes WA, Pühler A, Kalinowski J., J Bacteriol 184(10), 2002
PMID: 11976302
Claes WA, Pühler A, Kalinowski J., J Bacteriol 184(10), 2002
PMID: 11976302
Genome-wide transcription profiling of Corynebacterium glutamicum after heat shock and during growth on acetate and glucose.
Muffler A, Bettermann S, Haushalter M, Hörlein A, Neveling U, Schramm M, Sorgenfrei O., J Biotechnol 98(2-3), 2002
PMID: 12141991
Muffler A, Bettermann S, Haushalter M, Hörlein A, Neveling U, Schramm M, Sorgenfrei O., J Biotechnol 98(2-3), 2002
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Carbohydrate cycling in micro-organisms: what can (13)C-NMR tell us?
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