Acetate metabolism and its regulation in Corynebacterium glutamicum
Gerstmeir R, Wendisch VF, Schnicke S, Ruan H, Farwick M, Reinscheid D, Eikmanns BJ (2003)
Journal of Biotechnology 104(1-3): 99-122.
Zeitschriftenaufsatz
| Veröffentlicht | Englisch
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Autor*in
Gerstmeir, R.;
Wendisch, Volker F.UniBi ;
Schnicke, S.;
Ruan, H.;
Farwick, M.;
Reinscheid, D.;
Eikmanns, B. J.
Einrichtung
Abstract / Bemerkung
The amino acid producing Corynebacterium glutamicum grows aerobically on a variety of carbohydrates and organic acids as single or combined sources of carbon and energy. Among the substrates metabolized are glucose and acetate which both can also serve as substrates for amino acid production. Based on biochemical, genetic and regulatory studies and on quantitative determination of metabolic fluxes during utilization of acetate and/or glucose, this review summarizes the present knowledge on the different steps of the fundamental pathways of acetate utilization in C glutamicum, namely, on acetate transport, acetate activation, tricarboxylic acid (TCA) cycle, glyoxylate cycle and gluconeogenesis. It becomes evident that, although the pathways of acetate utilization follow the same theme in many bacteria, important biochemical, genetic and regulatory peculiarities exist in C glutamicum. Recent genome wide and comparative expression analyses in C glutamicum cells grown on glucose and on acetate substantiated previously identified transcriptional regulation of acetate activating enzymes and of glyoxylate cycle enzymes. Additionally, a variety of genes obviously also under transcriptional control in response to the presence or absence of acetate in the growth medium were uncovered. These genes, thus also belonging to the acetate stimulon of C glutamicum, include genes coding for TCA cycle enzymes (e.g. aconitase and succinate dehydrogenase), for gluconeogenesis (phosphoenolpyruvate carboxykinase), for glycolysis (pyruvate dehydrogenase El) and genes coding for proteins with hitherto unknown function. Although the basic mechanism of transcriptional regulation of the enzymes involved in acetate metabolism is not yet understood, some recent findings led to a better understanding of the adaptation of C glutamicum to acetate at the molecular level. (C) 2003 Elsevier B.V. All rights reserved.
Stichworte
tricarboxylic-acid cycle;
escherichia-coli k12;
gram-positive bacteria;
acetate metabolism;
corynebacterium glutamicum;
acetate activation;
glyoxylate cycle;
carbon flux regulation;
expression profiling;
phosphoenolpyruvate carboxykinase gene;
cytoplasmic malate-dehydrogenases;
sequence-analysis;
pyruvate-carboxylase;
bacillus-subtilis acetate;
carbon catabolite repression;
isocitrate dehydrogenase
Erscheinungsjahr
2003
Zeitschriftentitel
Journal of Biotechnology
Band
104
Ausgabe
1-3
Seite(n)
99-122
ISSN
0168-1656
Page URI
https://pub.uni-bielefeld.de/record/1895000
Zitieren
Gerstmeir R, Wendisch VF, Schnicke S, et al. Acetate metabolism and its regulation in Corynebacterium glutamicum. Journal of Biotechnology. 2003;104(1-3):99-122.
Gerstmeir, R., Wendisch, V. F., Schnicke, S., Ruan, H., Farwick, M., Reinscheid, D., & Eikmanns, B. J. (2003). Acetate metabolism and its regulation in Corynebacterium glutamicum. Journal of Biotechnology, 104(1-3), 99-122. https://doi.org/10.1016/S0168-1656(03)00167-6
Gerstmeir, R., Wendisch, Volker F., Schnicke, S., Ruan, H., Farwick, M., Reinscheid, D., and Eikmanns, B. J. 2003. “Acetate metabolism and its regulation in Corynebacterium glutamicum”. Journal of Biotechnology 104 (1-3): 99-122.
Gerstmeir, R., Wendisch, V. F., Schnicke, S., Ruan, H., Farwick, M., Reinscheid, D., and Eikmanns, B. J. (2003). Acetate metabolism and its regulation in Corynebacterium glutamicum. Journal of Biotechnology 104, 99-122.
Gerstmeir, R., et al., 2003. Acetate metabolism and its regulation in Corynebacterium glutamicum. Journal of Biotechnology, 104(1-3), p 99-122.
R. Gerstmeir, et al., “Acetate metabolism and its regulation in Corynebacterium glutamicum”, Journal of Biotechnology, vol. 104, 2003, pp. 99-122.
Gerstmeir, R., Wendisch, V.F., Schnicke, S., Ruan, H., Farwick, M., Reinscheid, D., Eikmanns, B.J.: Acetate metabolism and its regulation in Corynebacterium glutamicum. Journal of Biotechnology. 104, 99-122 (2003).
Gerstmeir, R., Wendisch, Volker F., Schnicke, S., Ruan, H., Farwick, M., Reinscheid, D., and Eikmanns, B. J. “Acetate metabolism and its regulation in Corynebacterium glutamicum”. Journal of Biotechnology 104.1-3 (2003): 99-122.
Daten bereitgestellt von European Bioinformatics Institute (EBI)
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Kohl TA, Baumbach J, Jungwirth B, Pühler A, Tauch A., J Biotechnol 135(4), 2008
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Group 2 sigma factor SigB of Corynebacterium glutamicum positively regulates glucose metabolism under conditions of oxygen deprivation.
Ehira S, Shirai T, Teramoto H, Inui M, Yukawa H., Appl Environ Microbiol 74(16), 2008
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Ehira S, Shirai T, Teramoto H, Inui M, Yukawa H., Appl Environ Microbiol 74(16), 2008
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Function and transcriptional regulation of the isocitrate lyase in Pseudomonas aeruginosa.
Kretzschmar U, Khodaverdi V, Jeoung JH, Görisch H., Arch Microbiol 190(2), 2008
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Engineering of a glycerol utilization pathway for amino acid production by Corynebacterium glutamicum.
Rittmann D, Lindner SN, Wendisch VF., Appl Environ Microbiol 74(20), 2008
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Rittmann D, Lindner SN, Wendisch VF., Appl Environ Microbiol 74(20), 2008
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Effect of carbon source availability and growth phase on expression of Corynebacterium glutamicum genes involved in the tricarboxylic acid cycle and glyoxylate bypass.
Han SO, Inui M, Yukawa H., Microbiology 154(pt 10), 2008
PMID: 18832313
Han SO, Inui M, Yukawa H., Microbiology 154(pt 10), 2008
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Response of the cytoplasmic and membrane proteome of Corynebacterium glutamicum ATCC 13032 to pH changes.
Barriuso-Iglesias M, Schluesener D, Barreiro C, Poetsch A, Martín JF., BMC Microbiol 8(), 2008
PMID: 19091079
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RamB, the transcriptional regulator of acetate metabolism in Corynebacterium glutamicum, is subject to regulation by RamA and RamB.
Cramer A, Auchter M, Frunzke J, Bott M, Eikmanns BJ., J Bacteriol 189(3), 2007
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RamA, the transcriptional regulator of acetate metabolism in Corynebacterium glutamicum, is subject to negative autoregulation.
Cramer A, Eikmanns BJ., J Mol Microbiol Biotechnol 12(1-2), 2007
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Effect of elevated dissolved carbon dioxide concentrations on growth of Corynebacterium glutamicum on D-glucose and L-lactate.
Bäumchen C, Knoll A, Husemann B, Seletzky J, Maier B, Dietrich C, Amoabediny G, Büchs J., J Biotechnol 128(4), 2007
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The DeoR-type regulator SugR represses expression of ptsG in Corynebacterium glutamicum.
Engels V, Wendisch VF., J Bacteriol 189(8), 2007
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Transcriptionally regulated adhA gene encodes alcohol dehydrogenase required for ethanol and n-propanol utilization in Corynebacterium glutamicum R.
Kotrbova-Kozak A, Kotrba P, Inui M, Sajdok J, Yukawa H., Appl Microbiol Biotechnol 76(6), 2007
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The alcohol dehydrogenase gene adhA in Corynebacterium glutamicum is subject to carbon catabolite repression.
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Bott M., Trends Microbiol 15(9), 2007
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A comparative proteomic approach to understand the adaptations of an H+ -ATPase-defective mutant of Corynebacterium glutamicum ATCC14067 to energy deficiencies.
Li L, Wada M, Yokota A., Proteomics 7(18), 2007
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Li L, Wada M, Yokota A., Proteomics 7(18), 2007
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Physiological ecology of Stenoxybacter acetivorans, an obligate microaerophile in termite guts.
Wertz JT, Breznak JA., Appl Environ Microbiol 73(21), 2007
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The DeoR-type transcriptional regulator SugR acts as a repressor for genes encoding the phosphoenolpyruvate:sugar phosphotransferase system (PTS) in Corynebacterium glutamicum.
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Emerging Corynebacterium glutamicum systems biology.
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Sauer U, Eikmanns BJ., FEMS Microbiol Rev 29(4), 2005
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Srivastava P, Deb JK., Protein Expr Purif 40(2), 2005
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Ruan H, Gerstmeir R, Schnicke S, Eikmanns BJ., Sci China C Life Sci 48(2), 2005
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Ruan H, Gerstmeir R, Schnicke S, Eikmanns BJ., Sci China C Life Sci 48(2), 2005
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Adaptation of Corynebacterium glutamicum to ammonium limitation: a global analysis using transcriptome and proteome techniques.
Silberbach M, Schäfer M, Hüser AT, Kalinowski J, Pühler A, Krämer R, Burkovski A., Appl Environ Microbiol 71(5), 2005
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AMP-forming acetyl-CoA synthetase from the extremely halophilic archaeon Haloarcula marismortui: purification, identification and expression of the encoding gene, and phylogenetic affiliation.
Bräsen C, Schönheit P., Extremophiles 9(5), 2005
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Bräsen C, Schönheit P., Extremophiles 9(5), 2005
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Lysine and glutamate production by Corynebacterium glutamicum on glucose, fructose and sucrose: roles of malic enzyme and fructose-1,6-bisphosphatase.
Georgi T, Rittmann D, Wendisch VF., Metab Eng 7(4), 2005
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Georgi T, Rittmann D, Wendisch VF., Metab Eng 7(4), 2005
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The AraC-type regulator RipA represses aconitase and other iron proteins from Corynebacterium under iron limitation and is itself repressed by DtxR.
Wennerhold J, Krug A, Bott M., J Biol Chem 280(49), 2005
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Wennerhold J, Krug A, Bott M., J Biol Chem 280(49), 2005
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DNA microarray analysis of the nitrogen starvation response of Corynebacterium glutamicum.
Silberbach M, Hüser A, Kalinowski J, Pühler A, Walter B, Krämer R, Burkovski A., J Biotechnol 119(4), 2005
PMID: 15935503
Silberbach M, Hüser A, Kalinowski J, Pühler A, Walter B, Krämer R, Burkovski A., J Biotechnol 119(4), 2005
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Characterization of a Corynebacterium glutamicum lactate utilization operon induced during temperature-triggered glutamate production.
Stansen C, Uy D, Delaunay S, Eggeling L, Goergen JL, Wendisch VF., Appl Environ Microbiol 71(10), 2005
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Stansen C, Uy D, Delaunay S, Eggeling L, Goergen JL, Wendisch VF., Appl Environ Microbiol 71(10), 2005
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RamB, a novel transcriptional regulator of genes involved in acetate metabolism of Corynebacterium glutamicum.
Gerstmeir R, Cramer A, Dangel P, Schaffer S, Eikmanns BJ., J Bacteriol 186(9), 2004
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Gerstmeir R, Cramer A, Dangel P, Schaffer S, Eikmanns BJ., J Bacteriol 186(9), 2004
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Roles of pyruvate kinase and malic enzyme in Corynebacterium glutamicum for growth on carbon sources requiring gluconeogenesis.
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Netzer R, Krause M, Rittmann D, Peters-Wendisch PG, Eggeling L, Wendisch VF, Sahm H., Arch Microbiol 182(5), 2004
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Regulation of acetate and acetyl-CoA converting enzymes during growth on acetate and/or glucose in the halophilic archaeon Haloarcula marismortui.
Bräsen C, Schönheit P., FEMS Microbiol Lett 241(1), 2004
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Genome-wide expression analysis in Corynebacterium glutamicum using DNA microarrays.
Wendisch VF., J Biotechnol 104(1-3), 2003
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