Knock-out mutants from an En-1 mutagenized Arabidopsis thaliana population generate phenylpropanoid biosynthesis phenotypes
Wisman E, Hartmann U, Sagasser M, Baumann E, Palme K, Hahlbrock K, Saedler H, Weisshaar B (1998)
Proceedings of the National Academy of Sciences of the United States of America 95(21): 12432-12437.
Zeitschriftenaufsatz
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Autor*in
Wisman, Ellen;
Hartmann, Ulrike;
Sagasser, MartinUniBi;
Baumann, Elvira;
Palme, Klaus;
Hahlbrock, Klaus;
Saedler, Heinz;
Weisshaar, BerndUniBi
Abstract / Bemerkung
A collection of 8,000 Arabidopsis thaliana plants carrying 48,000 insertions of the maize transposable element En-1 has been generated. This population was used for reverse genetic analyses to identify insertions in individual gene loci. By using a PCR-based screening protocol, insertions were found in 55 genes. En-1 showed no preference for transcribed or untranscribed regions nor for a particular orientation relative to the gene of interest. In several cases, En-1 was inserted within a few kilobases upstream or downstream of the gene. En-1 was mobilized from such positions into the respective gene to cause gene disruption. Knock-out alleles of genes involved in flavonoid biosynthesis were generated. One mutant line contained an En-1 insertion in the flavonol synthase gene (FLS) and showed drastically reduced levels of kaempferol. Allelism tests with other lines containing En-1 insertions in the flavanone 3-hydroxylase gene (F3H) demonstrated that TRANSPARENT TESTA 6 (TT6) encodes flavanone 3-hydroxylase. The f3h and fls null mutants complete the set of A. thaliana lines defective in early steps of the flavonoid pathway. These experiments demonstrate the efficiency of the screening method and gene disruption strategy used for assigning functions to genes defined only by sequence.
Erscheinungsjahr
1998
Zeitschriftentitel
Proceedings of the National Academy of Sciences of the United States of America
Band
95
Ausgabe
21
Seite(n)
12432-12437
ISSN
0027-8424
eISSN
1091-6490
Page URI
https://pub.uni-bielefeld.de/record/1867936
Zitieren
Wisman E, Hartmann U, Sagasser M, et al. Knock-out mutants from an En-1 mutagenized Arabidopsis thaliana population generate phenylpropanoid biosynthesis phenotypes. Proceedings of the National Academy of Sciences of the United States of America. 1998;95(21):12432-12437.
Wisman, E., Hartmann, U., Sagasser, M., Baumann, E., Palme, K., Hahlbrock, K., Saedler, H., et al. (1998). Knock-out mutants from an En-1 mutagenized Arabidopsis thaliana population generate phenylpropanoid biosynthesis phenotypes. Proceedings of the National Academy of Sciences of the United States of America, 95(21), 12432-12437. https://doi.org/10.1073/pnas.95.21.12432
Wisman, Ellen, Hartmann, Ulrike, Sagasser, Martin, Baumann, Elvira, Palme, Klaus, Hahlbrock, Klaus, Saedler, Heinz, and Weisshaar, Bernd. 1998. “Knock-out mutants from an En-1 mutagenized Arabidopsis thaliana population generate phenylpropanoid biosynthesis phenotypes”. Proceedings of the National Academy of Sciences of the United States of America 95 (21): 12432-12437.
Wisman, E., Hartmann, U., Sagasser, M., Baumann, E., Palme, K., Hahlbrock, K., Saedler, H., and Weisshaar, B. (1998). Knock-out mutants from an En-1 mutagenized Arabidopsis thaliana population generate phenylpropanoid biosynthesis phenotypes. Proceedings of the National Academy of Sciences of the United States of America 95, 12432-12437.
Wisman, E., et al., 1998. Knock-out mutants from an En-1 mutagenized Arabidopsis thaliana population generate phenylpropanoid biosynthesis phenotypes. Proceedings of the National Academy of Sciences of the United States of America, 95(21), p 12432-12437.
E. Wisman, et al., “Knock-out mutants from an En-1 mutagenized Arabidopsis thaliana population generate phenylpropanoid biosynthesis phenotypes”, Proceedings of the National Academy of Sciences of the United States of America, vol. 95, 1998, pp. 12432-12437.
Wisman, E., Hartmann, U., Sagasser, M., Baumann, E., Palme, K., Hahlbrock, K., Saedler, H., Weisshaar, B.: Knock-out mutants from an En-1 mutagenized Arabidopsis thaliana population generate phenylpropanoid biosynthesis phenotypes. Proceedings of the National Academy of Sciences of the United States of America. 95, 12432-12437 (1998).
Wisman, Ellen, Hartmann, Ulrike, Sagasser, Martin, Baumann, Elvira, Palme, Klaus, Hahlbrock, Klaus, Saedler, Heinz, and Weisshaar, Bernd. “Knock-out mutants from an En-1 mutagenized Arabidopsis thaliana population generate phenylpropanoid biosynthesis phenotypes”. Proceedings of the National Academy of Sciences of the United States of America 95.21 (1998): 12432-12437.
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Naringenin,2-oxoglutarate 3-dioxygenase (UNIPROT: Q9S818)
Organism: Arabidopsis thaliana
Download in FASTA format
Organism: Arabidopsis thaliana
Download in FASTA format
Flavonol synthase/flavanone 3-hydroxylase (UNIPROT: Q96330)
Organism: Arabidopsis thaliana
Download in FASTA format
Organism: Arabidopsis thaliana
Download in FASTA format
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The metal ion transporter IRT1 is necessary for iron homeostasis and efficient photosynthesis in Arabidopsis thaliana.
Varotto C, Maiwald D, Pesaresi P, Jahns P, Salamini F, Leister D., Plant J 31(5), 2002
PMID: 12207649
Varotto C, Maiwald D, Pesaresi P, Jahns P, Salamini F, Leister D., Plant J 31(5), 2002
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The TRANSPARENT TESTA16 locus encodes the ARABIDOPSIS BSISTER MADS domain protein and is required for proper development and pigmentation of the seed coat.
Nesi N, Debeaujon I, Jond C, Stewart AJ, Jenkins GI, Caboche M, Lepiniec L., Plant Cell 14(10), 2002
PMID: 12368498
Nesi N, Debeaujon I, Jond C, Stewart AJ, Jenkins GI, Caboche M, Lepiniec L., Plant Cell 14(10), 2002
PMID: 12368498
Identification and biochemical characterization of mutants in the proanthocyanidin pathway in Arabidopsis.
Abrahams S, Tanner GJ, Larkin PJ, Ashton AR., Plant Physiol 130(2), 2002
PMID: 12376625
Abrahams S, Tanner GJ, Larkin PJ, Ashton AR., Plant Physiol 130(2), 2002
PMID: 12376625
Rapid identification of Arabidopsis insertion mutants by non-radioactive detection of T-DNA tagged genes.
Ríos G, Lossow A, Hertel B, Breuer F, Schaefer S, Broich M, Kleinow T, Jásik J, Winter J, Ferrando A, Farrás R, Panicot M, Henriques R, Mariaux JB, Oberschall A, Molnár G, Berendzen K, Shukla V, Lafos M, Koncz Z, Rédei GP, Schell J, Koncz C., Plant J 32(2), 2002
PMID: 12383089
Ríos G, Lossow A, Hertel B, Breuer F, Schaefer S, Broich M, Kleinow T, Jásik J, Winter J, Ferrando A, Farrás R, Panicot M, Henriques R, Mariaux JB, Oberschall A, Molnár G, Berendzen K, Shukla V, Lafos M, Koncz Z, Rédei GP, Schell J, Koncz C., Plant J 32(2), 2002
PMID: 12383089
Micrografting techniques for testing long-distance signalling in Arabidopsis.
Turnbull CG, Booker JP, Leyser HM., Plant J 32(2), 2002
PMID: 12383090
Turnbull CG, Booker JP, Leyser HM., Plant J 32(2), 2002
PMID: 12383090
Nucleotide sequence variation at two genes of the phenylpropanoid pathway, the FAH1 and F3H genes, in Arabidopsis thaliana.
Aguadé M., Mol Biol Evol 18(1), 2001
PMID: 11141187
Aguadé M., Mol Biol Evol 18(1), 2001
PMID: 11141187
Bus, a bushy Arabidopsis CYP79F1 knockout mutant with abolished synthesis of short-chain aliphatic glucosinolates.
Reintanz B, Lehnen M, Reichelt M, Gershenzon J, Kowalczyk M, Sandberg G, Godde M, Uhl R, Palme K., Plant Cell 13(2), 2001
PMID: 11226190
Reintanz B, Lehnen M, Reichelt M, Gershenzon J, Kowalczyk M, Sandberg G, Godde M, Uhl R, Palme K., Plant Cell 13(2), 2001
PMID: 11226190
Screening of the rice viviparous mutants generated by endogenous retrotransposon Tos17 insertion. Tagging of a zeaxanthin epoxidase gene and a novel ostatc gene.
Agrawal GK, Yamazaki M, Kobayashi M, Hirochika R, Miyao A, Hirochika H., Plant Physiol 125(3), 2001
PMID: 11244106
Agrawal GK, Yamazaki M, Kobayashi M, Hirochika R, Miyao A, Hirochika H., Plant Physiol 125(3), 2001
PMID: 11244106
Arabidopsis gene knockout: phenotypes wanted.
Bouché N, Bouchez D., Curr Opin Plant Biol 4(2), 2001
PMID: 11228432
Bouché N, Bouchez D., Curr Opin Plant Biol 4(2), 2001
PMID: 11228432
The TRANSPARENT TESTA12 gene of Arabidopsis encodes a multidrug secondary transporter-like protein required for flavonoid sequestration in vacuoles of the seed coat endothelium.
Debeaujon I, Peeters AJ, Léon-Kloosterziel KM, Koornneef M., Plant Cell 13(4), 2001
PMID: 11283341
Debeaujon I, Peeters AJ, Léon-Kloosterziel KM, Koornneef M., Plant Cell 13(4), 2001
PMID: 11283341
Flavonoid accumulation patterns of transparent testa mutants of arabidopsis.
Peer WA, Brown DE, Tague BW, Muday GK, Taiz L, Murphy AS., Plant Physiol 126(2), 2001
PMID: 11402185
Peer WA, Brown DE, Tague BW, Muday GK, Taiz L, Murphy AS., Plant Physiol 126(2), 2001
PMID: 11402185
The arabidopsis ATHB-8 HD-zip protein acts as a differentiation-promoting transcription factor of the vascular meristems.
Baima S, Possenti M, Matteucci A, Wisman E, Altamura MM, Ruberti I, Morelli G., Plant Physiol 126(2), 2001
PMID: 11402194
Baima S, Possenti M, Matteucci A, Wisman E, Altamura MM, Ruberti I, Morelli G., Plant Physiol 126(2), 2001
PMID: 11402194
A fast neutron deletion mutagenesis-based reverse genetics system for plants.
Li X, Song Y, Century K, Straight S, Ronald P, Dong X, Lassner M, Zhang Y., Plant J 27(3), 2001
PMID: 11532169
Li X, Song Y, Century K, Straight S, Ronald P, Dong X, Lassner M, Zhang Y., Plant J 27(3), 2001
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The Arabidopsis TT2 gene encodes an R2R3 MYB domain protein that acts as a key determinant for proanthocyanidin accumulation in developing seed.
Nesi N, Jond C, Debeaujon I, Caboche M, Lepiniec L., Plant Cell 13(9), 2001
PMID: 11549766
Nesi N, Jond C, Debeaujon I, Caboche M, Lepiniec L., Plant Cell 13(9), 2001
PMID: 11549766
Dominant negative guard cell K+ channel mutants reduce inward-rectifying K+ currents and light-induced stomatal opening in arabidopsis.
Kwak JM, Murata Y, Baizabal-Aguirre VM, Merrill J, Wang M, Kemper A, Hawke SD, Tallman G, Schroeder JI., Plant Physiol 127(2), 2001
PMID: 11598222
Kwak JM, Murata Y, Baizabal-Aguirre VM, Merrill J, Wang M, Kemper A, Hawke SD, Tallman G, Schroeder JI., Plant Physiol 127(2), 2001
PMID: 11598222
MYB61 is required for mucilage deposition and extrusion in the Arabidopsis seed coat.
Penfield S, Meissner RC, Shoue DA, Carpita NC, Bevan MW., Plant Cell 13(12), 2001
PMID: 11752387
Penfield S, Meissner RC, Shoue DA, Carpita NC, Bevan MW., Plant Cell 13(12), 2001
PMID: 11752387
The late developmental pattern of Mu transposon excision is conferred by a cauliflower mosaic virus 35S -driven MURA cDNA in transgenic maize.
Raizada MN, Walbot V., Plant Cell 12(1), 2000
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Raizada MN, Walbot V., Plant Cell 12(1), 2000
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A transgenic perspective on plant functional genomics.
Pereira A., Transgenic Res 9(4-5), 2000
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Pereira A., Transgenic Res 9(4-5), 2000
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Technical advance: display and isolation of transposon-flanking sequences starting from genomic DNA or RNA.
Yephremov A, Saedler H., Plant J 21(5), 2000
PMID: 10758500
Yephremov A, Saedler H., Plant J 21(5), 2000
PMID: 10758500
Saturation mutagenesis using maize transposons.
Walbot V., Curr Opin Plant Biol 3(2), 2000
PMID: 10712955
Walbot V., Curr Opin Plant Biol 3(2), 2000
PMID: 10712955
Postgerminative growth and lipid catabolism in oilseeds lacking the glyoxylate cycle.
Eastmond PJ, Germain V, Lange PR, Bryce JH, Smith SM, Graham IA., Proc Natl Acad Sci U S A 97(10), 2000
PMID: 10805817
Eastmond PJ, Germain V, Lange PR, Bryce JH, Smith SM, Graham IA., Proc Natl Acad Sci U S A 97(10), 2000
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B and C floral organ identity functions require SEPALLATA MADS-box genes.
Pelaz S, Ditta GS, Baumann E, Wisman E, Yanofsky MF., Nature 405(6783), 2000
PMID: 10821278
Pelaz S, Ditta GS, Baumann E, Wisman E, Yanofsky MF., Nature 405(6783), 2000
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Efficient insertion mutagenesis of Arabidopsis by tissue culture-induced activation of the tobacco retrotransposon Tto1.
Okamoto H, Hirochika H., Plant J 23(2), 2000
PMID: 10929123
Okamoto H, Hirochika H., Plant J 23(2), 2000
PMID: 10929123
Identification of the Arabidopsis thaliana flavonoid 3'-hydroxylase gene and functional expression of the encoded P450 enzyme.
Schoenbohm C, Martens S, Eder C, Forkmann G, Weisshaar B., Biol Chem 381(8), 2000
PMID: 11030432
Schoenbohm C, Martens S, Eder C, Forkmann G, Weisshaar B., Biol Chem 381(8), 2000
PMID: 11030432
Molecular analysis of NOZZLE, a gene involved in pattern formation and early sporogenesis during sex organ development in Arabidopsis thaliana.
Schiefthaler U, Balasubramanian S, Sieber P, Chevalier D, Wisman E, Schneitz K., Proc Natl Acad Sci U S A 96(20), 1999
PMID: 10500234
Schiefthaler U, Balasubramanian S, Sieber P, Chevalier D, Wisman E, Schneitz K., Proc Natl Acad Sci U S A 96(20), 1999
PMID: 10500234
Ac as a tool for the functional genomics of rice.
Enoki H, Izawa T, Kawahara M, Komatsu M, Koh S, Kyozuka J, Shimamoto K., Plant J 19(5), 1999
PMID: 10504582
Enoki H, Izawa T, Kawahara M, Komatsu M, Koh S, Kyozuka J, Shimamoto K., Plant J 19(5), 1999
PMID: 10504582
The golden decade of molecular floral development (1990-1999): A cheerful obituary
Theissen G, Saedler H., Dev Genet 25(3), 1999
PMID: 10528259
Theissen G, Saedler H., Dev Genet 25(3), 1999
PMID: 10528259
Function search in a large transcription factor gene family in Arabidopsis: assessing the potential of reverse genetics to identify insertional mutations in R2R3 MYB genes.
Meissner RC, Jin H, Cominelli E, Denekamp M, Fuertes A, Greco R, Kranz HD, Penfield S, Petroni K, Urzainqui A, Martin C, Paz-Ares J, Smeekens S, Tonelli C, Weisshaar B, Baumann E, Klimyuk V, Marillonnet S, Patel K, Speulman E, Tissier AF, Bouchez D, Jones JJ, Pereira A, Wisman E., Plant Cell 11(10), 1999
PMID: 10521515
Meissner RC, Jin H, Cominelli E, Denekamp M, Fuertes A, Greco R, Kranz HD, Penfield S, Petroni K, Urzainqui A, Martin C, Paz-Ares J, Smeekens S, Tonelli C, Weisshaar B, Baumann E, Klimyuk V, Marillonnet S, Patel K, Speulman E, Tissier AF, Bouchez D, Jones JJ, Pereira A, Wisman E., Plant Cell 11(10), 1999
PMID: 10521515
Multiple independent defective suppressor-mutator transposon insertions in Arabidopsis: a tool for functional genomics.
Tissier AF, Marillonnet S, Klimyuk V, Patel K, Torres MA, Murphy G, Jones JD., Plant Cell 11(10), 1999
PMID: 10521516
Tissier AF, Marillonnet S, Klimyuk V, Patel K, Torres MA, Murphy G, Jones JD., Plant Cell 11(10), 1999
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T-DNA as an insertional mutagen in Arabidopsis.
Krysan PJ, Young JC, Sussman MR., Plant Cell 11(12), 1999
PMID: 10590158
Krysan PJ, Young JC, Sussman MR., Plant Cell 11(12), 1999
PMID: 10590158
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