bZIP transcription factors in Arabidopsis

Jakoby M, Weisshaar B, Dröge-Laser W, Vicente-Carbajosa J, Tiedemann J, Kroj T, Parcy F (2002)
Trends in Plant Science 7(3): 106-111.

Zeitschriftenaufsatz | Veröffentlicht | Englisch
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Jakoby, M.; Weisshaar, BerndUniBi ; Dröge-Laser, W.; Vicente-Carbajosa, J.; Tiedemann, J.; Kroj, T.; Parcy, F.
Abstract / Bemerkung
In plants, basic region/leucine zipper motif (bZIP) transcription factors regulate processes including pathogen defence, light and stress signalling, seed maturation and flower development. The Arabidopsis genome sequence contains 75 distinct members of the bZIP family, of which approximately 50 are not described in the literature. Using common domains, the AtbZIP family can be subdivided into ten groups. Here, we review the available data on bZIP functions in the context of subgroup membership and discuss the interacting proteins. This integration is essential for a complete functional characterization of bZIP transcription factors in plants, and to identify functional redundancies among AtbZIP factors.
Trends in Plant Science
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Jakoby M, Weisshaar B, Dröge-Laser W, et al. bZIP transcription factors in Arabidopsis. Trends in Plant Science. 2002;7(3):106-111.
Jakoby, M., Weisshaar, B., Dröge-Laser, W., Vicente-Carbajosa, J., Tiedemann, J., Kroj, T., & Parcy, F. (2002). bZIP transcription factors in Arabidopsis. Trends in Plant Science, 7(3), 106-111.
Jakoby, M., Weisshaar, Bernd, Dröge-Laser, W., Vicente-Carbajosa, J., Tiedemann, J., Kroj, T., and Parcy, F. 2002. “bZIP transcription factors in Arabidopsis”. Trends in Plant Science 7 (3): 106-111.
Jakoby, M., Weisshaar, B., Dröge-Laser, W., Vicente-Carbajosa, J., Tiedemann, J., Kroj, T., and Parcy, F. (2002). bZIP transcription factors in Arabidopsis. Trends in Plant Science 7, 106-111.
Jakoby, M., et al., 2002. bZIP transcription factors in Arabidopsis. Trends in Plant Science, 7(3), p 106-111.
M. Jakoby, et al., “bZIP transcription factors in Arabidopsis”, Trends in Plant Science, vol. 7, 2002, pp. 106-111.
Jakoby, M., Weisshaar, B., Dröge-Laser, W., Vicente-Carbajosa, J., Tiedemann, J., Kroj, T., Parcy, F.: bZIP transcription factors in Arabidopsis. Trends in Plant Science. 7, 106-111 (2002).
Jakoby, M., Weisshaar, Bernd, Dröge-Laser, W., Vicente-Carbajosa, J., Tiedemann, J., Kroj, T., and Parcy, F. “bZIP transcription factors in Arabidopsis”. Trends in Plant Science 7.3 (2002): 106-111.

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Analysis of the tomato leaf transcriptome during successive hemibiotrophic stages of a compatible interaction with the oomycete pathogen Phytophthora infestans.
Zuluaga AP, Vega-Arreguín JC, Fei Z, Matas AJ, Patev S, Fry WE, Rose JK., Mol Plant Pathol 17(1), 2016
PMID: 25808779
Epigenetic Modifications and Plant Hormone Action.
Yamamuro C, Zhu JK, Yang Z., Mol Plant 9(1), 2016
PMID: 26520015
TENOR: Database for Comprehensive mRNA-Seq Experiments in Rice.
Kawahara Y, Oono Y, Wakimoto H, Ogata J, Kanamori H, Sasaki H, Mori S, Matsumoto T, Itoh T., Plant Cell Physiol 57(1), 2016
PMID: 26578693
Gene expression regulation in roots under drought.
Janiak A, Kwaśniewski M, Szarejko I., J Exp Bot 67(4), 2016
PMID: 26663562
Wheat Transcription Factor TaAREB3 Participates in Drought and Freezing Tolerances in Arabidopsis.
Wang J, Li Q, Mao X, Li A, Jing R., Int J Biol Sci 12(2), 2016
PMID: 26884722
The Arabidopsis transcriptional regulator DPB3-1 enhances heat stress tolerance without growth retardation in rice.
Sato H, Todaka D, Kudo M, Mizoi J, Kidokoro S, Zhao Y, Shinozaki K, Yamaguchi-Shinozaki K., Plant Biotechnol J 14(8), 2016
PMID: 26841113
The Arabidopsis DELAY OF GERMINATION 1 gene affects ABSCISIC ACID INSENSITIVE 5 (ABI5) expression and genetically interacts with ABI3 during Arabidopsis seed development.
Dekkers BJ, He H, Hanson J, Willems LA, Jamar DC, Cueff G, Rajjou L, Hilhorst HW, Bentsink L., Plant J 85(4), 2016
PMID: 26729600
A Drought-Inducible Transcription Factor Delays Reproductive Timing in Rice.
Zhang C, Liu J, Zhao T, Gomez A, Li C, Yu C, Li H, Lin J, Yang Y, Liu B, Lin C., Plant Physiol 171(1), 2016
PMID: 26945049
Genome-wide characterization and analysis of bZIP transcription factor gene family related to abiotic stress in cassava.
Hu W, Yang H, Yan Y, Wei Y, Tie W, Ding Z, Zuo J, Peng M, Li K., Sci Rep 6(), 2016
PMID: 26947924
Effects of drought and salt-stresses on gene expression in Caragana korshinskii seedlings revealed by RNA-seq.
Li S, Fan C, Li Y, Zhang J, Sun J, Chen Y, Tian C, Su X, Lu M, Liang C, Hu Z., BMC Genomics 17(), 2016
PMID: 26951633
Sequencing and comparative analyses of the genomes of zoysiagrasses.
Tanaka H, Hirakawa H, Kosugi S, Nakayama S, Ono A, Watanabe A, Hashiguchi M, Gondo T, Ishigaki G, Muguerza M, Shimizu K, Sawamura N, Inoue T, Shigeki Y, Ohno N, Tabata S, Akashi R, Sato S., DNA Res 23(2), 2016
PMID: 26975196
Evolutionary and Expression Analyses of the Apple Basic Leucine Zipper Transcription Factor Family.
Zhao J, Guo R, Guo C, Hou H, Wang X, Gao H., Front Plant Sci 7(), 2016
PMID: 27066030
Changes in Transcript Related to Osmosis and Intracellular Ion Homeostasis in Paulownia tomentosa under Salt Stress.
Fan G, Wang L, Deng M, Zhao Z, Dong Y, Zhang X, Li Y., Front Plant Sci 7(), 2016
PMID: 27066034
The bZIP Protein VIP1 Is Involved in Touch Responses in Arabidopsis Roots.
Tsugama D, Liu S, Takano T., Plant Physiol 171(2), 2016
PMID: 27208231
Screen Identifying Arabidopsis Transcription Factors Involved in the Response to 9-Lipoxygenase-Derived Oxylipins.
Walper E, Weiste C, Mueller MJ, Hamberg M, Dröge-Laser W., PLoS One 11(4), 2016
PMID: 27073862
Identification of novel transcriptional regulators of Zat12 using comprehensive yeast one-hybrid screens.
Ben Daniel BH, Cattan E, Wachtel C, Avrahami D, Glick Y, Malichy A, Gerber D, Miller G., Physiol Plant 157(4), 2016
PMID: 26923089
Association genetics and transcriptome analysis reveal a gibberellin-responsive pathway involved in regulating photosynthesis.
Xie J, Tian J, Du Q, Chen J, Li Y, Yang X, Li B, Zhang D., J Exp Bot 67(11), 2016
PMID: 27091876
Abscisic Acid and Abiotic Stress Tolerance in Crop Plants.
Sah SK, Reddy KR, Li J., Front Plant Sci 7(), 2016
PMID: 27200044
Identification of Two bZIP Transcription Factors Interacting with the Promoter of Soybean Rubisco Activase Gene (GmRCAα).
Zhang J, Du H, Chao M, Yin Z, Yang H, Li Y, Huang F, Yu D., Front Plant Sci 7(), 2016
PMID: 27242832
Involvement of DkTGA1 Transcription Factor in Anaerobic Response Leading to Persimmon Fruit Postharvest De-Astringency.
Zhu QG, Wang MM, Gong ZY, Fang F, Sun NJ, Li X, Grierson D, Yin XR, Chen KS., PLoS One 11(5), 2016
PMID: 27196670
Genome-Wide Identification and Characterization of bZIP Transcription Factors in Brassica oleracea under Cold Stress.
Hwang I, Manoharan RK, Kang JG, Chung MY, Kim YW, Nou IS., Biomed Res Int 2016(), 2016
PMID: 27314020
VIP1 is very important/interesting protein 1 regulating touch responses of Arabidopsis.
Tsugama D, Liu S, Takano T., Plant Signal Behav 11(6), 2016
PMID: 27171129
Genome-wide analysis of transcription factors involved in maize embryonic callus formation.
Ge F, Luo X, Huang X, Zhang Y, He X, Liu M, Lin H, Peng H, Li L, Zhang Z, Pan G, Shen Y., Physiol Plant 158(4), 2016
PMID: 27194582
Genome-Wide Analysis of the bZIP Gene Family Identifies Two ABI5-Like bZIP Transcription Factors, BrABI5a and BrABI5b, as Positive Modulators of ABA Signalling in Chinese Cabbage.
Bai Y, Zhu W, Hu X, Sun C, Li Y, Wang D, Wang Q, Pei G, Zhang Y, Guo A, Zhao H, Lu H, Mu X, Hu J, Zhou X, Xie CG., PLoS One 11(7), 2016
PMID: 27414644
Transcription Factors and Plants Response to Drought Stress: Current Understanding and Future Directions.
Joshi R, Wani SH, Singh B, Bohra A, Dar ZA, Lone AA, Pareek A, Singla-Pareek SL., Front Plant Sci 7(), 2016
PMID: 27471513
Genome-wide analyses of the bZIP family reveal their involvement in the development, ripening and abiotic stress response in banana.
Hu W, Wang L, Tie W, Yan Y, Ding Z, Liu J, Li M, Peng M, Xu B, Jin Z., Sci Rep 6(), 2016
PMID: 27445085
CicerTransDB 1.0: a resource for expression and functional study of chickpea transcription factors.
Gayali S, Acharya S, Lande NV, Pandey A, Chakraborty S, Chakraborty N., BMC Plant Biol 16(1), 2016
PMID: 27472917
The photomorphogenic factors UV-B RECEPTOR 1, ELONGATED HYPOCOTYL 5, and HY5 HOMOLOGUE are part of the UV-B signalling pathway in grapevine and mediate flavonol accumulation in response to the environment.
Loyola R, Herrera D, Mas A, Wong DC, Höll J, Cavallini E, Amato A, Azuma A, Ziegler T, Aquea F, Castellarin SD, Bogs J, Tornielli GB, Peña-Neira A, Czemmel S, Alcalde JA, Matus JT, Arce-Johnson P., J Exp Bot 67(18), 2016
PMID: 27543604
Functional characterization of the Arabidopsis transcription factor bZIP29 reveals its role in leaf and root development.
Van Leene J, Blomme J, Kulkarni SR, Cannoot B, De Winne N, Eeckhout D, Persiau G, Van De Slijke E, Vercruysse L, Vanden Bossche R, Heyndrickx KS, Vanneste S, Goossens A, Gevaert K, Vandepoele K, Gonzalez N, Inzé D, De Jaeger G., J Exp Bot 67(19), 2016
PMID: 27660483
Altered expression of the bZIP transcription factor DRINK ME affects growth and reproductive development in Arabidopsis thaliana.
Lozano-Sotomayor P, Chávez Montes RA, Silvestre-Vañó M, Herrera-Ubaldo H, Greco R, Pablo-Villa J, Galliani BM, Diaz-Ramirez D, Weemen M, Boutilier K, Pereira A, Colombo L, Madueño F, Marsch-Martínez N, de Folter S., Plant J 88(3), 2016
PMID: 27402171
Variation Analysis of Physiological Traits in Betula platyphylla Overexpressing TaLEA-ThbZIP Gene under Salt Stress.
Zhao X, Zheng T, Shao L, Xiao Z, Wang F, Li S, Zang L, Zheng M, Li Y, Qu GZ., PLoS One 11(11), 2016
PMID: 27802286
Transcriptome Profiling of the Phaseolus vulgaris - Colletotrichum lindemuthianum Pathosystem.
Padder BA, Kamfwa K, Awale HE, Kelly JD., PLoS One 11(11), 2016
PMID: 27829044
A Ramie bZIP Transcription Factor BnbZIP2 Is Involved in Drought, Salt, and Heavy Metal Stress Response.
Huang C, Zhou J, Jie Y, Xing H, Zhong Y, Yu W, She W, Ma Y, Liu Z, Zhang Y., DNA Cell Biol 35(12), 2016
PMID: 27845851
ABI5 Is a Regulator of Seed Maturation and Longevity in Legumes.
Zinsmeister J, Lalanne D, Terrasson E, Chatelain E, Vandecasteele C, Vu BL, Dubois-Laurent C, Geoffriau E, Signor CL, Dalmais M, Gutbrod K, Dörmann P, Gallardo K, Bendahmane A, Buitink J, Leprince O., Plant Cell 28(11), 2016
PMID: 27956585
StCDPK3 Phosphorylates In Vitro Two Transcription Factors Involved in GA and ABA Signaling in Potato: StRSG1 and StABF1.
Grandellis C, Fantino E, Muñiz García MN, Bialer MG, Santin F, Capiati DA, Ulloa RM., PLoS One 11(12), 2016
PMID: 27907086
Characterization and Functional Analysis of Calmodulin and Calmodulin-Like Genes in Fragaria vesca.
Zhang K, Yue D, Wei W, Hu Y, Feng J, Zou Z., Front Plant Sci 7(), 2016
PMID: 27990153
Transcriptional Control of Glutaredoxin GRXC9 Expression by a Salicylic Acid-Dependent and NPR1-Independent Pathway in Arabidopsis.
Herrera-Vásquez A, Carvallo L, Blanco F, Tobar M, Villarroel-Candia E, Vicente-Carbajosa J, Salinas P, Holuigue L., Plant Mol Biol Report 33(), 2015
PMID: 26696694
System-wide characterization of bZIP transcription factor proteins involved in infection-related morphogenesis of Magnaporthe oryzae.
Tang W, Ru Y, Hong L, Zhu Q, Zuo R, Guo X, Wang J, Zhang H, Zheng X, Wang P, Zhang Z., Environ Microbiol 17(4), 2015
PMID: 25186614
Population transcriptomics reveals a potentially positive role of expression diversity in adaptation.
Xu Q, Xing S, Zhu C, Liu W, Fan Y, Wang Q, Song Z, Yang W, Luo F, Shang F, Kang L, Chen W, Yan J, Li J, Sang T., J Integr Plant Biol 57(3), 2015
PMID: 25251542
A basic leucine zipper transcription factor, AabZIP1, connects abscisic acid signaling with artemisinin biosynthesis in Artemisia annua.
Zhang F, Fu X, Lv Z, Lu X, Shen Q, Zhang L, Zhu M, Wang G, Sun X, Liao Z, Tang K., Mol Plant 8(1), 2015
PMID: 25578280
Basic leucine zipper family in barley: genome-wide characterization of members and expression analysis.
Pourabed E, Ghane Golmohamadi F, Soleymani Monfared P, Razavi SM, Shobbar ZS., Mol Biotechnol 57(1), 2015
PMID: 25173685
Pigeonpea Hybrid-Proline-Rich Protein (CcHyPRP) Confers Biotic and Abiotic Stress Tolerance in Transgenic Rice.
Mellacheruvu S, Tamirisa S, Vudem DR, Khareedu VR., Front Plant Sci 6(), 2015
PMID: 26834756
Insights into structural and functional diversity of Dof (DNA binding with one finger) transcription factor.
Gupta S, Malviya N, Kushwaha H, Nasim J, Bisht NC, Singh VK, Yadav D., Planta 241(3), 2015
PMID: 25564353
FASCIATED EAR4 encodes a bZIP transcription factor that regulates shoot meristem size in maize.
Pautler M, Eveland AL, LaRue T, Yang F, Weeks R, Lunde C, Je BI, Meeley R, Komatsu M, Vollbrecht E, Sakai H, Jackson D., Plant Cell 27(1), 2015
PMID: 25616871
Transcriptional networks in plant immunity.
Tsuda K, Somssich IE., New Phytol 206(3), 2015
PMID: 25623163
The regulatory network of ThbZIP1 in response to abscisic acid treatment.
Ji X, Liu G, Liu Y, Nie X, Zheng L, Wang Y., Front Plant Sci 6(), 2015
PMID: 25713576
Phospholipase D affects translocation of NPR1 to the nucleus in Arabidopsis thaliana.
Janda M, Šašek V, Chmelařová H, Andrejch J, Nováková M, Hajšlová J, Burketová L, Valentová O., Front Plant Sci 6(), 2015
PMID: 25741350
Dual role of tree florigen activation complex component FD in photoperiodic growth control and adaptive response pathways.
Tylewicz S, Tsuji H, Miskolczi P, Petterle A, Azeez A, Jonsson K, Shimamoto K, Bhalerao RP., Proc Natl Acad Sci U S A 112(10), 2015
PMID: 25713384
The NPR1 homolog GhNPR1 plays an important role in the defense response of Gladiolus hybridus.
Zhong X, Xi L, Lian Q, Luo X, Wu Z, Seng S, Yuan X, Yi M., Plant Cell Rep 34(6), 2015
PMID: 25708873
Transcriptome analysis of maize leaf systemic symptom infected by Bipolaris zeicola.
Liu M, Gao J, Yin F, Gong G, Qin C, Ye K, Zhang M, Sun X, Zhou Y, Zhang Y., PLoS One 10(3), 2015
PMID: 25781606
A novel wheat bZIP transcription factor, TabZIP60, confers multiple abiotic stress tolerances in transgenic Arabidopsis
Zhang L, Zhang L, Xia C, Zhao G, Liu J, Jia J, Kong X., Physiol Plant 153(4), 2015
PMID: IND601259792
The Divergent Roles of STAYGREEN (SGR) Homologs in Chlorophyll Degradation.
Sakuraba Y, Park SY, Paek NC., Mol Cells 38(5), 2015
PMID: 25913011
bHLH106 Integrates Functions of Multiple Genes through Their G-Box to Confer Salt Tolerance on Arabidopsis.
Ahmad A, Niwa Y, Goto S, Ogawa T, Shimizu M, Suzuki A, Kobayashi K, Kobayashi H., PLoS One 10(5), 2015
PMID: 25978450
Differential expression of four soybean bZIP genes during Phakopsora pachyrhizi infection.
Alves MS, Soares ZG, Vidigal PM, Barros EG, Poddanosqui AM, Aoyagi LN, Abdelnoor RV, Marcelino-Guimarães FC, Fietto LG., Funct Integr Genomics 15(6), 2015
PMID: 26013145
Precise protein post-translational modifications modulate ABI5 activity.
Yu F, Wu Y, Xie Q., Trends Plant Sci 20(9), 2015
PMID: 26044742
Comparative transcriptomics analysis reveals difference of key gene expression between banana and plantain in response to cold stress.
Yang QS, Gao J, He WD, Dou TX, Ding LJ, Wu JH, Li CY, Peng XX, Zhang S, Yi GJ., BMC Genomics 16(), 2015
PMID: 26059100
Determinants of nucleosome positioning and their influence on plant gene expression.
Liu MJ, Seddon AE, Tsai ZT, Major IT, Floer M, Howe GA, Shiu SH., Genome Res 25(8), 2015
PMID: 26063739
Crucial roles of the pentatricopeptide repeat protein SOAR1 in Arabidopsis response to drought, salt and cold stresses.
Jiang SC, Mei C, Liang S, Yu YT, Lu K, Wu Z, Wang XF, Zhang DP., Plant Mol Biol 88(4-5), 2015
PMID: 26093896
The Responses of Arabidopsis Early Light-Induced Protein2 to Ultraviolet B, High Light, and Cold Stress Are Regulated by a Transcriptional Regulatory Unit Composed of Two Elements.
Hayami N, Sakai Y, Kimura M, Saito T, Tokizawa M, Iuchi S, Kurihara Y, Matsui M, Nomoto M, Tada Y, Yamamoto YY., Plant Physiol 169(1), 2015
PMID: 26175515
SnRK1-triggered switch of bZIP63 dimerization mediates the low-energy response in plants.
Mair A, Pedrotti L, Wurzinger B, Anrather D, Simeunovic A, Weiste C, Valerio C, Dietrich K, Kirchler T, Nägele T, Vicente Carbajosa J, Hanson J, Baena-González E, Chaban C, Weckwerth W, Dröge-Laser W, Teige M., Elife 4(), 2015
PMID: 26263501
Crosstalk between Two bZIP Signaling Pathways Orchestrates Salt-Induced Metabolic Reprogramming in Arabidopsis Roots.
Hartmann L, Pedrotti L, Weiste C, Fekete A, Schierstaedt J, Göttler J, Kempa S, Krischke M, Dietrich K, Mueller MJ, Vicente-Carbajosa J, Hanson J, Dröge-Laser W., Plant Cell 27(8), 2015
PMID: 26276836
De novo assembly and characterisation of the field pea transcriptome using RNA-Seq.
Sudheesh S, Sawbridge TI, Cogan NO, Kennedy P, Forster JW, Kaur S., BMC Genomics 16(), 2015
PMID: 26275991
Correlation analysis of the transcriptome of growing leaves with mature leaf parameters in a maize RIL population.
Baute J, Herman D, Coppens F, De Block J, Slabbinck B, Dell'Acqua M, Pè ME, Maere S, Nelissen H, Inzé D., Genome Biol 16(), 2015
PMID: 26357925
Phosphorylation Affects DNA-Binding of the Senescence-Regulating bZIP Transcription Factor GBF1.
Smykowski A, Fischer SM, Zentgraf U., Plants (Basel) 4(3), 2015
PMID: 27135347
Ectopic expression of a hot pepper bZIP-like transcription factor in potato enhances drought tolerance without decreasing tuber yield.
Moon SJ, Han SY, Kim DY, Yoon IS, Shin D, Byun MO, Kwon HB, Kim BG., Plant Mol Biol 89(4-5), 2015
PMID: 26394867
The Elucidation of the Interactome of 16 Arabidopsis bZIP Factors Reveals Three Independent Functional Networks.
Llorca CM, Berendzen KW, Malik WA, Mahn S, Piepho HP, Zentgraf U., PLoS One 10(10), 2015
PMID: 26452049
Identification of Putative Candidate Genes for Water Stress Tolerance in Canola (Brassica napus).
Zhang J, Mason AS, Wu J, Liu S, Zhang X, Luo T, Redden R, Batley J, Hu L, Yan G., Front Plant Sci 6(), 2015
PMID: 26640475
The wheat TaGBF1 gene is involved in the blue-light response and salt tolerance.
Sun Y, Xu W, Jia Y, Wang M, Xia G., Plant J 84(6), 2015
PMID: 26588879
Genome-wide analysis of the basic leucine zipper (bZIP) transcription factor gene family in six legume genomes.
Wang Z, Cheng K, Wan L, Yan L, Jiang H, Liu S, Lei Y, Liao B., BMC Genomics 16(), 2015
PMID: 26651343
Characterization of marine diatom-infecting virus promoters in the model diatom Phaeodactylum tricornutum.
Kadono T, Miyagawa-Yamaguchi A, Kira N, Tomaru Y, Okami T, Yoshimatsu T, Hou L, Ohama T, Fukunaga K, Okauchi M, Yamaguchi H, Ohnishi K, Falciatore A, Adachi M., Sci Rep 5(), 2015
PMID: 26692124
DREB2C acts as a transcriptional activator of the thermo tolerance-related phytocystatin 4 (AtCYS4) gene.
Je J, Song C, Hwang JE, Chung WS, Lim CO., Transgenic Res 23(1), 2014
PMID: 23868510
OsbZIP71, a bZIP transcription factor, confers salinity and drought tolerance in rice.
Liu C, Mao B, Ou S, Wang W, Liu L, Wu Y, Chu C, Wang X., Plant Mol Biol 84(1-2), 2014
PMID: 23918260
The role of ABA and MAPK signaling pathways in plant abiotic stress responses.
Danquah A, de Zelicourt A, Colcombet J, Hirt H., Biotechnol Adv 32(1), 2014
PMID: 24091291
Molecular evolution of the HD-ZIP I gene family in legume genomes.
Li Z, Jiang H, Zhou L, Deng L, Lin Y, Peng X, Yan H, Cheng B., Gene 533(1), 2014
PMID: 24095777
BLADE-ON-PETIOLE genes: setting boundaries in development and defense.
Khan M, Xu H, Hepworth SR., Plant Sci 215-216(), 2014
PMID: 24388527
A tandem affinity purification tag of TGA2 for isolation of interacting proteins in Arabidopsis thaliana.
Stotz HU, Findling S, Nukarinen E, Weckwerth W, Mueller MJ, Berger S., Plant Signal Behav 9(10), 2014
PMID: 25482810
RNA-Seq transcriptome analysis of Spirodela dormancy without reproduction.
Wang W, Wu Y, Messing J., BMC Genomics 15(), 2014
PMID: 24456086
DNA-binding specificities of plant transcription factors and their potential to define target genes.
Franco-Zorrilla JM, López-Vidriero I, Carrasco JL, Godoy M, Vera P, Solano R., Proc Natl Acad Sci U S A 111(6), 2014
PMID: 24477691
Transcriptional circuitry underlying seed coat development in Arabidopsis.
Khan D, Millar JL, Girard IJ, Belmonte MF., Plant Sci 219-220(), 2014
PMID: 24576764
Transcription Factor Functional Protein-Protein Interactions in Plant Defense Responses.
Alves MS, Dadalto SP, Gonçalves AB, de Souza GB, Barros VA, Fietto LG., Proteomes 2(1), 2014
PMID: 28250372
The AtCathB3 gene, encoding a cathepsin B-like protease, is expressed during germination of Arabidopsis thaliana and transcriptionally repressed by the basic leucine zipper protein GBF1.
Iglesias-Fernández R, Wozny D, Iriondo-de Hond M, Oñate-Sánchez L, Carbonero P, Barrero-Sicilia C., J Exp Bot 65(8), 2014
PMID: 24600022
Identification, expression and interaction analyses of calcium-dependent protein kinase (CPK) genes in canola (Brassica napus L.).
Zhang H, Liu WZ, Zhang Y, Deng M, Niu F, Yang B, Wang X, Wang B, Liang W, Deyholos MK, Jiang YQ., BMC Genomics 15(), 2014
PMID: 24646378
Master Regulators in Plant Glucose Signaling Networks.
Sheen J., J Plant Biol 57(2), 2014
PMID: 25530701
Functional interplay between protein kinase CK2 and salicylic acid sustains PIN transcriptional expression and root development.
Armengot L, Marquès-Bueno MM, Soria-Garcia A, Müller M, Munné-Bosch S, Martínez MC., Plant J 78(3), 2014
PMID: 24547808
Abscisic acid (ABA) sensitivity regulates desiccation tolerance in germinated Arabidopsis seeds.
Maia J, Dekkers BJ, Dolle MJ, Ligterink W, Hilhorst HW., New Phytol 203(1), 2014
PMID: 24697728
Genome-wide analysis and expression profile of the bZIP transcription factor gene family in grapevine (Vitis vinifera).
Liu J, Chen N, Chen F, Cai B, Dal Santo S, Tornielli GB, Pezzotti M, Cheng ZM., BMC Genomics 15(), 2014
PMID: 24725365
Genome-wide analysis of the bZIP transcription factors in cucumber.
Baloglu MC, Eldem V, Hajyzadeh M, Unver T., PLoS One 9(4), 2014
PMID: 24760072
Integrating bioinformatic resources to predict transcription factors interacting with cis-sequences conserved in co-regulated genes.
Dubos C, Kelemen Z, Sebastian A, Bülow L, Huep G, Xu W, Grain D, Salsac F, Brousse C, Lepiniec L, Weisshaar B, Contreras-Moreira B, Hehl R., BMC Genomics 15(), 2014
PMID: 24773781
Effects of high temperature on photosynthesis and related gene expression in poplar.
Song Y, Chen Q, Ci D, Shao X, Zhang D., BMC Plant Biol 14(), 2014
PMID: 24774695
Abscisic acid perception and signaling: structural mechanisms and applications.
Ng LM, Melcher K, Teh BT, Xu HE., Acta Pharmacol Sin 35(5), 2014
PMID: 24786231
Salt stress and senescence: identification of cross-talk regulatory components.
Allu AD, Soja AM, Wu A, Szymanski J, Balazadeh S., J Exp Bot 65(14), 2014
PMID: 24803504
Phosphoproteomic Analyses Reveal Early Signaling Events in the Osmotic Stress Response.
E Stecker K, Minkoff BB, Sussman MR., Plant Physiol 165(3), 2014
PMID: 24808101
Transcription factor WRKY46 regulates osmotic stress responses and stomatal movement independently in Arabidopsis.
Ding ZJ, Yan JY, Xu XY, Yu DQ, Li GX, Zhang SQ, Zheng SJ., Plant J 79(1), 2014
PMID: 24773321
The low energy signaling network.
Tomé F, Nägele T, Adamo M, Garg A, Marco-Llorca C, Nukarinen E, Pedrotti L, Peviani A, Simeunovic A, Tatkiewicz A, Tomar M, Gamm M., Front Plant Sci 5(), 2014
PMID: 25101105
Aureochrome 1 illuminated: structural changes of a transcription factor probed by molecular spectroscopy.
Kerruth S, Ataka K, Frey D, Schlichting I, Heberle J., PLoS One 9(7), 2014
PMID: 25058114
A novel method to identify the DNA motifs recognized by a defined transcription factor.
Ji X, Wang L, Nie X, He L, Zang D, Liu Y, Zhang B, Wang Y., Plant Mol Biol 86(4-5), 2014
PMID: 25108460
Systems approach identifies TGA1 and TGA4 transcription factors as important regulatory components of the nitrate response of Arabidopsis thaliana roots.
Alvarez JM, Riveras E, Vidal EA, Gras DE, Contreras-López O, Tamayo KP, Aceituno F, Gómez I, Ruffel S, Lejay L, Jordana X, Gutiérrez RA., Plant J 80(1), 2014
PMID: 25039575
Identification of target genes of the bZIP transcription factor OsTGAP1, whose overexpression causes elicitor-induced hyperaccumulation of diterpenoid phytoalexins in rice cells.
Miyamoto K, Matsumoto T, Okada A, Komiyama K, Chujo T, Yoshikawa H, Nojiri H, Yamane H, Okada K., PLoS One 9(8), 2014
PMID: 25157897
Enhanced oxidative stress resistance through activation of a zinc deficiency transcription factor in Brachypodium distachyon.
Glover-Cutter KM, Alderman S, Dombrowski JE, Martin RC., Plant Physiol 166(3), 2014
PMID: 25228396
Evening expression of arabidopsis GIGANTEA is controlled by combinatorial interactions among evolutionarily conserved regulatory motifs.
Berns MC, Nordström K, Cremer F, Tóth R, Hartke M, Simon S, Klasen JR, Bürstel I, Coupland G., Plant Cell 26(10), 2014
PMID: 25361953
Comparative transcriptomic analysis of male and female flowers of monoecious Quercus suber.
Rocheta M, Sobral R, Magalhães J, Amorim MI, Ribeiro T, Pinheiro M, Egas C, Morais-Cecílio L, Costa MM., Front Plant Sci 5(), 2014
PMID: 25414713
Transcriptome profiling shows gene regulation patterns in a flavonoid pathway in response to exogenous phenylalanine in Boesenbergia rotunda cell culture.
Md-Mustafa ND, Khalid N, Gao H, Peng Z, Alimin MF, Bujang N, Ming WS, Mohd-Yusuf Y, Harikrishna JA, Othman RY., BMC Genomics 15(), 2014
PMID: 25407215
Drought tolerance conferred to sugarcane by association with Gluconacetobacter diazotrophicus: a transcriptomic view of hormone pathways.
Vargas L, Santa Brígida AB, Mota Filho JP, de Carvalho TG, Rojas CA, Vaneechoutte D, Van Bel M, Farrinelli L, Ferreira PC, Vandepoele K, Hemerly AS., PLoS One 9(12), 2014
PMID: 25489849
Plant 14-3-3 proteins as spiders in a web of phosphorylation.
de Boer AH, van Kleeff PJ, Gao J., Protoplasma 250(2), 2013
PMID: 22926776
ABF transcription factors of Thellungiella salsuginea: Structure, expression profiles and interaction with 14-3-3 regulatory proteins.
Vysotskii DA, de Vries-van Leeuwen IJ, Souer E, Babakov AV, de Boer AH., Plant Signal Behav 8(1), 2013
PMID: 23221757
Transcriptomic analysis of floral organs from Phalaenopsis orchid by using oligonucleotide microarray.
Hsiao YY, Huang TH, Fu CH, Huang SC, Chen YJ, Huang YM, Chen WH, Tsai WC, Chen HH., Gene 518(1), 2013
PMID: 23262337
The inhibitory effect of ABA on floral transition is mediated by ABI5 in Arabidopsis.
Wang Y, Li L, Ye T, Lu Y, Chen X, Wu Y., J Exp Bot 64(2), 2013
PMID: 23307919
The outer mitochondrial membrane in higher plants.
Duncan O, van der Merwe MJ, Daley DO, Whelan J., Trends Plant Sci 18(4), 2013
PMID: 23291162
Isolation and functional characterization of a salt responsive transcriptional factor, LrbZIP from lotus root (Nelumbo nucifera Gaertn).
Cheng L, Li S, Hussain J, Xu X, Yin J, Zhang Y, Chen X, Li L., Mol Biol Rep 40(6), 2013
PMID: 23288562
AUREOCHROME1a-mediated induction of the diatom-specific cyclin dsCYC2 controls the onset of cell division in diatoms (Phaeodactylum tricornutum).
Huysman MJ, Fortunato AE, Matthijs M, Costa BS, Vanderhaeghen R, Van den Daele H, Sachse M, Inzé D, Bowler C, Kroth PG, Wilhelm C, Falciatore A, Vyverman W, De Veylder L., Plant Cell 25(1), 2013
PMID: 23292736
Abscisic acid-dependent regulation of small rubber particle protein gene expression in Taraxacum brevicorniculatum is mediated by TbbZIP1.
Fricke J, Hillebrand A, Twyman RM, Prüfer D, Schulze Gronover C., Plant Cell Physiol 54(4), 2013
PMID: 23303876
Specificity determinants for the abscisic acid response element.
Sarkar AK, Lahiri A., FEBS Open Bio 3(), 2013
PMID: 23772380
Systemic acquired resistance: turning local infection into global defense.
Fu ZQ, Dong X., Annu Rev Plant Biol 64(), 2013
PMID: 23373699
Rice transglutaminase gene: Identification, protein expression, functionality, light dependence and specific cell location.
Campos N, Castañón S, Urreta I, Santos M, Torné JM., Plant Sci 205-206(), 2013
PMID: 23498867
Structure, function and networks of transcription factors involved in abiotic stress responses.
Lindemose S, O'Shea C, Jensen MK, Skriver K., Int J Mol Sci 14(3), 2013
PMID: 23485989
NUCLEAR FACTOR Y transcription factors have both opposing and additive roles in ABA-mediated seed germination.
Kumimoto RW, Siriwardana CL, Gayler KK, Risinger JR, Siefers N, Holt BF., PLoS One 8(3), 2013
PMID: 23527203
Transcriptional analysis of drought-induced genes in the roots of a tolerant genotype of the common bean (Phaseolus vulgaris L.).
Recchia GH, Caldas DG, Beraldo AL, da Silva MJ, Tsai SM., Int J Mol Sci 14(4), 2013
PMID: 23538843
Arabidopsis thaliana bZIP44: a transcription factor affecting seed germination and expression of the mannanase-encoding gene AtMAN7.
Iglesias-Fernández R, Barrero-Sicilia C, Carrillo-Barral N, Oñate-Sánchez L, Carbonero P., Plant J 74(5), 2013
PMID: 23461773
Identification of genes related to agarwood formation: transcriptome analysis of healthy and wounded tissues of Aquilaria sinensis.
Xu Y, Zhang Z, Wang M, Wei J, Chen H, Gao Z, Sui C, Luo H, Zhang X, Yang Y, Meng H, Li W., BMC Genomics 14(), 2013
PMID: 23565705
Plant bZIP transcription factors responsive to pathogens: a review.
Alves MS, Dadalto SP, Gonçalves AB, De Souza GB, Barros VA, Fietto LG., Int J Mol Sci 14(4), 2013
PMID: 23574941
Salicylic acid: an old hormone up to new tricks.
Boatwright JL, Pajerowska-Mukhtar K., Mol Plant Pathol 14(6), 2013
PMID: 23621321
Deep sequencing reveals transcriptome re-programming of Taxus × media cells to the elicitation with methyl jasmonate.
Sun G, Yang Y, Xie F, Wen JF, Wu J, Wilson IW, Tang Q, Liu H, Qiu D., PLoS One 8(4), 2013
PMID: 23646152
Rice transglutaminase gene: Identification, protein expression, functionality, light dependence and specific cell location
Campos N, I. Urreta, J.M. Torné, M. Santos, S. Castañón., Plant Sci 205-(), 2013
PMID: IND500636348
Tell me more: roles of NPRs in plant immunity.
Pajerowska-Mukhtar KM, Emerine DK, Mukhtar MS., Trends Plant Sci 18(7), 2013
PMID: 23683896
Global transcriptome profiles of Camellia sinensis during cold acclimation.
Wang XC, Zhao QY, Ma CL, Zhang ZH, Cao HL, Kong YM, Yue C, Hao XY, Chen L, Ma JQ, Jin JQ, Li X, Yang YJ., BMC Genomics 14(), 2013
PMID: 23799877
Characterization of a bZIP gene highly expressed during ripening of the peach fruit.
Lovisetto A, Guzzo F, Tadiello A, Confortin E, Pavanello A, Botton A, Casadoro G., Plant Physiol Biochem 70(), 2013
PMID: 23845825
Pathogen and Circadian Controlled 1 (PCC1) regulates polar lipid content, ABA-related responses, and pathogen defence in Arabidopsis thaliana.
Mir R, Hernández ML, Abou-Mansour E, Martínez-Rivas JM, Mauch F, Métraux JP, León J., J Exp Bot 64(11), 2013
PMID: 23833195
The Phaseolus vulgaris ZIP gene family: identification, characterization, mapping, and gene expression.
Astudillo C, Fernandez AC, Blair MW, Cichy KA., Front Plant Sci 4(), 2013
PMID: 23908661
A bZIP protein, VIP1, interacts with Arabidopsis heterotrimeric G protein β subunit, AGB1.
Tsugama D, Liu S, Takano T., Plant Physiol Biochem 71(), 2013
PMID: 23974356
Short term signaling responses in roots of young soybean seedlings exposed to cadmium stress.
Chmielowska-Bąk J, Lefèvre I, Lutts S, Deckert J., J Plant Physiol 170(18), 2013
PMID: 23942356
A genomic-scale artificial microRNA library as a tool to investigate the functionally redundant gene space in Arabidopsis.
Hauser F, Chen W, Deinlein U, Chang K, Ossowski S, Fitz J, Hannon GJ, Schroeder JI., Plant Cell 25(8), 2013
PMID: 23956262
Soybean GmbZIP123 gene enhances lipid content in the seeds of transgenic Arabidopsis plants.
Song QX, Li QT, Liu YF, Zhang FX, Ma B, Zhang WK, Man WQ, Du WG, Wang GD, Chen SY, Zhang JS., J Exp Bot 64(14), 2013
PMID: 23963672
bZIP67 regulates the omega-3 fatty acid content of Arabidopsis seed oil by activating fatty acid desaturase3.
Mendes A, Kelly AA, van Erp H, Shaw E, Powers SJ, Kurup S, Eastmond PJ., Plant Cell 25(8), 2013
PMID: 23995083
Model of how plants sense zinc deficiency.
Assunção AG, Persson DP, Husted S, Schjørring JK, Alexander RD, Aarts MG., Metallomics 5(9), 2013
PMID: 23851954
Grapevine NAC1 transcription factor as a convergent node in developmental processes, abiotic stresses, and necrotrophic/biotrophic pathogen tolerance.
Le Hénanff G, Profizi C, Courteaux B, Rabenoelina F, Gérard C, Clément C, Baillieul F, Cordelier S, Dhondt-Cordelier S., J Exp Bot 64(16), 2013
PMID: 24043850
Metal-binding ability of VIP1: a bZIP protein in Arabidopsis thaliana.
Tsugama D, Liu S, Takano T., Protein J 32(7), 2013
PMID: 24057918
Abscisic Acid synthesis and response.
Finkelstein R., Arabidopsis Book 11(), 2013
PMID: 24273463
ABA-insensitive3, ABA-insensitive5, and DELLAs Interact to activate the expression of SOMNUS and other high-temperature-inducible genes in imbibed seeds in Arabidopsis.
Lim S, Park J, Lee N, Jeong J, Toh S, Watanabe A, Kim J, Kang H, Kim DH, Kawakami N, Choi G., Plant Cell 25(12), 2013
PMID: 24326588
An ethylene response factor (ERF5) promoting adaptation to drought and salt tolerance in tomato.
Pan Y, Seymour GB, Lu C, Hu Z, Chen X, Chen G., Plant Cell Rep 31(2), 2012
PMID: 22038370
Characterization of StABF1, a stress-responsive bZIP transcription factor from Solanum tuberosum L. that is phosphorylated by StCDPK2 in vitro.
Muñiz García MN, Giammaria V, Grandellis C, Téllez-Iñón MT, Ulloa RM, Capiati DA., Planta 235(4), 2012
PMID: 22042328
Identification of cis-acting promoter elements in cold- and dehydration-induced transcriptional pathways in Arabidopsis, rice, and soybean.
Maruyama K, Todaka D, Mizoi J, Yoshida T, Kidokoro S, Matsukura S, Takasaki H, Sakurai T, Yamamoto YY, Yoshiwara K, Kojima M, Sakakibara H, Shinozaki K, Yamaguchi-Shinozaki K., DNA Res 19(1), 2012
PMID: 22184637
Seasonal abscisic acid signal and a basic leucine zipper transcription factor, DkbZIP5, regulate proanthocyanidin biosynthesis in persimmon fruit.
Akagi T, Katayama-Ikegami A, Kobayashi S, Sato A, Kono A, Yonemori K., Plant Physiol 158(2), 2012
PMID: 22190340
Changes in the Transcriptome of Dry Leafy Spurge (Euphorbia esula) Seeds Imbibed at a Constant and Alternating Temperature
Foley ME, Chao WS, Doğğramaci M, Horvath DP, Anderson JV., Weed Sci. 60(1), 2012
PMID: IND601309521
Transcriptional regulation of Arabidopsis MIR168a and argonaute1 homeostasis in abscisic acid and abiotic stress responses.
Li W, Cui X, Meng Z, Huang X, Xie Q, Wu H, Jin H, Zhang D, Liang W., Plant Physiol 158(3), 2012
PMID: 22247272
The type III effector HsvG of the gall-forming Pantoea agglomerans mediates expression of the host gene HSVGT.
Nissan G, Manulis-Sasson S, Chalupowicz L, Teper D, Yeheskel A, Pasmanik-Chor M, Sessa G, Barash I., Mol Plant Microbe Interact 25(2), 2012
PMID: 21995766
Constitutive activation of transcription factor OsbZIP46 improves drought tolerance in rice.
Tang N, Zhang H, Li X, Xiao J, Xiong L., Plant Physiol 158(4), 2012
PMID: 22301130
Cloning and characterization of the stress-induced bZIP gene ZmbZIP60 from maize.
Wang B, Zheng J, Liu Y, Wang J, Wang G., Mol Biol Rep 39(5), 2012
PMID: 22307781
Analysis of the Arabidopsis shoot meristem transcriptome during floral transition identifies distinct regulatory patterns and a leucine-rich repeat protein that promotes flowering.
Torti S, Fornara F, Vincent C, Andrés F, Nordström K, Göbel U, Knoll D, Schoof H, Coupland G., Plant Cell 24(2), 2012
PMID: 22319055
Deregulation of sucrose-controlled translation of a bZIP-type transcription factor results in sucrose accumulation in leaves.
Thalor SK, Berberich T, Lee SS, Yang SH, Zhu X, Imai R, Takahashi Y, Kusano T., PLoS One 7(3), 2012
PMID: 22457737
A bZIP protein, VIP1, is a regulator of osmosensory signaling in Arabidopsis.
Tsugama D, Liu S, Takano T., Plant Physiol 159(1), 2012
PMID: 22452852
SINGLET OXYGEN RESISTANT 1 links reactive electrophile signaling to singlet oxygen acclimation in Chlamydomonas reinhardtii.
Fischer BB, Ledford HK, Wakao S, Huang SG, Casero D, Pellegrini M, Merchant SS, Koller A, Eggen RI, Niyogi KK., Proc Natl Acad Sci U S A 109(20), 2012
PMID: 22529359
MicroRNAs as regulators in plant metal toxicity response.
Mendoza-Soto AB, Sánchez F, Hernández G., Front Plant Sci 3(), 2012
PMID: 22661980
Elongation-related functions of LEAFY COTYLEDON1 during the development of Arabidopsis thaliana.
Junker A, Mönke G, Rutten T, Keilwagen J, Seifert M, Thi TM, Renou JP, Balzergue S, Viehöver P, Hähnel U, Ludwig-Müller J, Altschmied L, Conrad U, Weisshaar B, Bäumlein H., Plant J 71(3), 2012
PMID: 22429691
Modeling regulation of zinc uptake via ZIP transporters in yeast and plant roots.
Claus J, Chavarría-Krauser A., PLoS One 7(6), 2012
PMID: 22715365
Redox-mediated mechanisms regulate DNA binding activity of the G-group of basic region leucine zipper (bZIP) transcription factors in Arabidopsis.
Shaikhali J, Norén L, de Dios Barajas-López J, Srivastava V, König J, Sauer UH, Wingsle G, Dietz KJ, Strand Å., J Biol Chem 287(33), 2012
PMID: 22718771
Isolation and characterization of two ABRE-binding proteins: EABF and EABF1 from the oil palm.
Omidvar V, Abdullah SN, Ho CL, Mahmood M, Al-Shanfari AB., Mol Biol Rep 39(9), 2012
PMID: 22722992
Transcript profile of the response of two soybean genotypes to potassium deficiency.
Wang C, Chen H, Hao Q, Sha A, Shan Z, Chen L, Zhou R, Zhi H, Zhou X., PLoS One 7(7), 2012
PMID: 22792192
Effects of drought on gene expression in maize reproductive and leaf meristem tissue revealed by RNA-Seq.
Kakumanu A, Ambavaram MM, Klumas C, Krishnan A, Batlang U, Myers E, Grene R, Pereira A., Plant Physiol 160(2), 2012
PMID: 22837360
Characterization of microRNAs expression during maize seed development.
Kang M, Zhao Q, Zhu D, Yu J., BMC Genomics 13(), 2012
PMID: 22853295
Comparative transcriptome analysis of two olive cultivars in response to NaCl-stress.
Bazakos C, Manioudaki ME, Therios I, Voyiatzis D, Kafetzopoulos D, Awada T, Kalaitzis P., PLoS One 7(8), 2012
PMID: 22952621
Transcriptomic analysis of grape (Vitis vinifera L.) leaves during and after recovery from heat stress.
Liu GT, Wang JF, Cramer G, Dai ZW, Duan W, Xu HG, Wu BH, Fan PG, Wang LJ, Li SH., BMC Plant Biol 12(), 2012
PMID: 23016701
Genome-wide analysis of bZIP-encoding genes in maize.
Wei K, Chen J, Wang Y, Chen Y, Chen S, Lin Y, Pan S, Zhong X, Xie D., DNA Res 19(6), 2012
PMID: 23103471
The BLADE-ON-PETIOLE genes of Arabidopsis are essential for resistance induced by methyl jasmonate.
Canet JV, Dobón A, Fajmonová J, Tornero P., BMC Plant Biol 12(), 2012
PMID: 23116333
Tobacco microRNAs prediction and their expression infected with Cucumber mosaic virus and Potato virus X.
Lang Q, Jin C, Lai L, Feng J, Chen S, Chen J., Mol Biol Rep 38(3), 2011
PMID: 20853150
Identification of salt responsive genes using comparative microarray analysis in Upland cotton (Gossypium hirsutum L.).
Rodriguez-Uribe L, Higbie SM, Stewart JM, Wilkins T, Lindemann W, Sengupta-Gopalan C, Zhang J., Plant Sci 180(3), 2011
PMID: 21421393
Identification of drought-response genes and a study of their expression during sucrose accumulation and water deficit in sugarcane culms.
Iskandar HM, Casu RE, Fletcher AT, Schmidt S, Xu J, Maclean DJ, Manners JM, Bonnett GD., BMC Plant Biol 11(), 2011
PMID: 21226964
MicroRNA534a control of BLADE-ON-PETIOLE 1 and 2 mediates juvenile-to-adult gametophyte transition in Physcomitrella patens.
Saleh O, Issman N, Seumel GI, Stav R, Samach A, Reski R, Frank W, Arazi T., Plant J 65(4), 2011
PMID: 21235646
Genome-wide expansion and expression divergence of the basic leucine zipper transcription factors in higher plants with an emphasis on sorghum.
Wang J, Zhou J, Zhang B, Vanitha J, Ramachandran S, Jiang SY., J Integr Plant Biol 53(3), 2011
PMID: 21205183
Heterodimers of the Arabidopsis transcription factors bZIP1 and bZIP53 reprogram amino acid metabolism during low energy stress.
Dietrich K, Weltmeier F, Ehlert A, Weiste C, Stahl M, Harter K, Dröge-Laser W., Plant Cell 23(1), 2011
PMID: 21278122
Transcriptional control of aspartate kinase expression during darkness and sugar depletion in Arabidopsis: involvement of bZIP transcription factors.
Ufaz S, Shukla V, Soloveichik Y, Golan Y, Breuer F, Koncz Z, Galili G, Koncz C, Zilberstein A., Planta 233(5), 2011
PMID: 21279647
Transcription factors as tools to engineer enhanced drought stress tolerance in plants.
Hussain SS, Kayani MA, Amjad M., Biotechnol Prog 27(2), 2011
PMID: 21302367
The soybean GmbZIP1 transcription factor enhances multiple abiotic stress tolerances in transgenic plants.
Gao SQ, Chen M, Xu ZS, Zhao CP, Li L, Xu HJ, Tang YM, Zhao X, Ma YZ., Plant Mol Biol 75(6), 2011
PMID: 21331631
Identification of salt responsive genes using comparative microarray analysis in Upland cotton (Gossypium hirsutum L.)
Rodriguez-Uribe L, Higbie SM, Stewart JM, Wilkins T, Lindemann W, Sengupta-Gopalan C, Zhang J., Plant Sci 180(3), 2011
PMID: IND44484696
Gene expression analysis of wounding-induced root-to-shoot communication in Arabidopsis thaliana.
Hasegawa S, Sogabe Y, Asano T, Nakagawa T, Nakamura H, Kodama H, Ohta H, Yamaguchi K, Mueller MJ, Nishiuchi T., Plant Cell Environ 34(5), 2011
PMID: 21241326
ABA-mediated transcriptional regulation in response to osmotic stress in plants.
Fujita Y, Fujita M, Shinozaki K, Yamaguchi-Shinozaki K., J Plant Res 124(4), 2011
PMID: 21416314
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston V., Plant Cell 23(3), 2011
PMID: 21447789
The sucrose-regulated Arabidopsis transcription factor bZIP11 reprograms metabolism and regulates trehalose metabolism.
Ma J, Hanssen M, Lundgren K, Hernández L, Delatte T, Ehlert A, Liu CM, Schluepmann H, Dröge-Laser W, Moritz T, Smeekens S, Hanson J., New Phytol 191(3), 2011
PMID: 21534971
Evolution of abscisic acid synthesis and signaling mechanisms.
Hauser F, Waadt R, Schroeder JI., Curr Biol 21(9), 2011
PMID: 21549957
Coping with stresses: roles of calcium- and calcium/calmodulin-regulated gene expression.
Reddy AS, Ali GS, Celesnik H, Day IS., Plant Cell 23(6), 2011
PMID: 21642548
New players unveiled in early anther development.
Xing S, Salinas M, Huijser P., Plant Signal Behav 6(7), 2011
PMID: 21633200
Growth arrest by trehalose-6-phosphate: an astonishing case of primary metabolite control over growth by way of the SnRK1 signaling pathway.
Delatte TL, Sedijani P, Kondou Y, Matsui M, de Jong GJ, Somsen GW, Wiese-Klinkenberg A, Primavesi LF, Paul MJ, Schluepmann H., Plant Physiol 157(1), 2011
PMID: 21753116
Integrating long-day flowering signals: a LEAFY binding site is essential for proper photoperiodic activation of APETALA1.
Benlloch R, Kim MC, Sayou C, Thévenon E, Parcy F, Nilsson O., Plant J 67(6), 2011
PMID: 21623976
Cytokinin antagonizes ABA suppression to seed germination of Arabidopsis by downregulating ABI5 expression.
Wang Y, Li L, Ye T, Zhao S, Liu Z, Feng YQ, Wu Y., Plant J 68(2), 2011
PMID: 21699589
The Arabidopsis bZIP gene AtbZIP63 is a sensitive integrator of transient abscisic acid and glucose signals.
Matiolli CC, Tomaz JP, Duarte GT, Prado FM, Del Bem LE, Silveira AB, Gauer L, Corrêa LG, Drumond RD, Viana AJ, Di Mascio P, Meyer C, Vincentz M., Plant Physiol 157(2), 2011
PMID: 21844310
Selection-driven divergence after gene duplication in Arabidopsis thaliana.
Gossmann TI, Schmid KJ., J Mol Evol 73(3-4), 2011
PMID: 21965041
Dissecting out the crosstalk between salinity and hormones in roots of Arabidopsis.
Singh K, Singla-Pareek SL, Pareek A., OMICS 15(12), 2011
PMID: 22181020
Identification of miR414 and expression analysis of conserved miRNAs from Stevia rebaudiana.
Guleria P, Yadav SK., Genomics Proteomics Bioinformatics 9(6), 2011
PMID: 22289477
Transcription regulation of abiotic stress responses in rice: a combined action of transcription factors and epigenetic mechanisms.
Santos AP, Serra T, Figueiredo DD, Barros P, Lourenço T, Chander S, Oliveira MM, Saibo NJ., OMICS 15(12), 2011
PMID: 22136664
Diversity and evolution of chromatin proteins encoded by DNA viruses.
de Souza RF, Iyer LM, Aravind L., Biochim Biophys Acta 1799(3-4), 2010
PMID: 19878744
AREB1, AREB2, and ABF3 are master transcription factors that cooperatively regulate ABRE-dependent ABA signaling involved in drought stress tolerance and require ABA for full activation.
Yoshida T, Fujita Y, Sayama H, Kidokoro S, Maruyama K, Mizoi J, Shinozaki K, Yamaguchi-Shinozaki K., Plant J 61(4), 2010
PMID: 19947981
Resistance and biomass in Arabidopsis: a new model for salicylic acid perception.
Canet JV, Dobón A, Ibáñez F, Perales L, Tornero P., Plant Biotechnol J 8(2), 2010
PMID: 20040060
The bZIP transcription factor OsABF1 is an ABA responsive element binding factor that enhances abiotic stress signaling in rice.
Amir Hossain M, Lee Y, Cho JI, Ahn CH, Lee SK, Jeon JS, Kang H, Lee CH, An G, Park PB., Plant Mol Biol 72(4-5), 2010
PMID: 20039193
OsAREB1, an ABRE-binding protein responding to ABA and glucose, has multiple functions in Arabidopsis.
Jin XF, Xiong AS, Peng RH, Liu JG, Gao F, Chen JM, Yao QH., BMB Rep 43(1), 2010
PMID: 20132733
The role of phosphorylatable serine residues in the DNA-binding domain of Arabidopsis bZIP transcription factors.
Kirchler T, Briesemeister S, Singer M, Schütze K, Keinath M, Kohlbacher O, Vicente-Carbajosa J, Teige M, Harter K, Chaban C., Eur J Cell Biol 89(2-3), 2010
PMID: 20047775
SoyDB: a knowledge database of soybean transcription factors.
Wang Z, Libault M, Joshi T, Valliyodan B, Nguyen HT, Xu D, Stacey G, Cheng J., BMC Plant Biol 10(), 2010
PMID: 20082720
Transcriptional regulatory network triggered by oxidative signals configures the early response mechanisms of japonica rice to chilling stress.
Yun KY, Park MR, Mohanty B, Herath V, Xu F, Mauleon R, Wijaya E, Bajic VB, Bruskiewich R, de Los Reyes BG., BMC Plant Biol 10(), 2010
PMID: 20100339
A eukaryotic-acquired gene by a biotrophic phytopathogen allows prolonged survival on the host by counteracting the shut-down of plant photosynthesis.
Garavaglia BS, Thomas L, Gottig N, Dunger G, Garofalo CG, Daurelio LD, Ndimba B, Orellano EG, Gehring C, Ottado J., PLoS One 5(1), 2010
PMID: 20126632
A tomato bZIP transcription factor, SlAREB, is involved in water deficit and salt stress response.
Hsieh TH, Li CW, Su RC, Cheng CP, Sanjaya, Tsai YC, Chan MT., Planta 231(6), 2010
PMID: 20358223
Functional analysis of the activation domain of RF2a, a rice transcription factor.
Ordiz MI, Yang J, Barbazuk WB, Beachy RN., Plant Biotechnol J 8(7), 2010
PMID: 20408988
Narrowing down the targets: towards successful genetic engineering of drought-tolerant crops.
Yang S, Vanderbeld B, Wan J, Huang Y., Mol Plant 3(3), 2010
PMID: 20507936
VIP1: linking Agrobacterium-mediated transformation to plant immunity?
Liu Y, Kong X, Pan J, Li D., Plant Cell Rep 29(8), 2010
PMID: 20473505
Arabidopsis thaliana transcription factors bZIP19 and bZIP23 regulate the adaptation to zinc deficiency.
Assunção AG, Herrero E, Lin YF, Huettel B, Talukdar S, Smaczniak C, Immink RG, van Eldik M, Fiers M, Schat H, Aarts MG., Proc Natl Acad Sci U S A 107(22), 2010
PMID: 20479230
Regulatory networks of cadmium stress in plants.
DalCorso G, Farinati S, Furini A., Plant Signal Behav 5(6), 2010
PMID: 20404494
Transcription factor families inferred from genome sequences of photosynthetic stramenopiles.
Rayko E, Maumus F, Maheswari U, Jabbari K, Bowler C., New Phytol 188(1), 2010
PMID: 20646219
An ABA-responsive element in the AtSUC1 promoter is involved in the regulation of AtSUC1 expression.
Hoth S, Niedermeier M, Feuerstein A, Hornig J, Sauer N., Planta 232(4), 2010
PMID: 20635094
Arabidopsis basic leucine-zipper transcription factors TGA9 and TGA10 interact with floral glutaredoxins ROXY1 and ROXY2 and are redundantly required for anther development.
Murmu J, Bush MJ, DeLong C, Li S, Xu M, Khan M, Malcolmson C, Fobert PR, Zachgo S, Hepworth SR., Plant Physiol 154(3), 2010
PMID: 20805327
Comparative transcriptomics among floral organs of the basal eudicot Eschscholzia californica as reference for floral evolutionary developmental studies.
Zahn LM, Ma X, Altman NS, Zhang Q, Wall PK, Tian D, Gibas CJ, Gharaibeh R, Leebens-Mack JH, Depamphilis CW, Ma H., Genome Biol 11(10), 2010
PMID: 20950453
Molecular basis of the core regulatory network in ABA responses: sensing, signaling and transport.
Umezawa T, Nakashima K, Miyakawa T, Kuromori T, Tanokura M, Shinozaki K, Yamaguchi-Shinozaki K., Plant Cell Physiol 51(11), 2010
PMID: 20980270
Regulation of the adaptation to zinc deficiency in plants.
Assunção AG, Schat H, Aarts MG., Plant Signal Behav 5(12), 2010
PMID: 21139426
Computational identification of 48 potato microRNAs and their targets.
Zhang W, Luo Y, Gong X, Zeng W, Li S., Comput Biol Chem 33(1), 2009
PMID: 18723398
Expression patterns within the Arabidopsis C/S1 bZIP transcription factor network: availability of heterodimerization partners controls gene expression during stress response and development.
Weltmeier F, Rahmani F, Ehlert A, Dietrich K, Schütze K, Wang X, Chaban C, Hanson J, Teige M, Harter K, Vicente-Carbajosa J, Smeekens S, Dröge-Laser W., Plant Mol Biol 69(1-2), 2009
PMID: 18841482
Real-time PCR monitoring of signal transduction related genes involved in water stress tolerance mechanism of sunflower.
Roche J, Hewezi T, Bouniols A, Gentzbittel L., Plant Physiol Biochem 47(2), 2009
PMID: 19054682
CHOTTO1, a double AP2 domain protein of Arabidopsis thaliana, regulates germination and seedling growth under excess supply of glucose and nitrate.
Yamagishi K, Tatematsu K, Yano R, Preston J, Kitamura S, Takahashi H, McCourt P, Kamiya Y, Nambara E., Plant Cell Physiol 50(2), 2009
PMID: 19109301
A recommendation for naming transcription factor proteins in the grasses.
Gray J, Bevan M, Brutnell T, Buell CR, Cone K, Hake S, Jackson D, Kellogg E, Lawrence C, McCouch S, Mockler T, Moose S, Paterson A, Peterson T, Rokshar D, Souza GM, Springer N, Stein N, Timmermans M, Wang GL, Grotewold E., Plant Physiol 149(1), 2009
PMID: 19126689
Transcriptional regulatory networks in response to abiotic stresses in Arabidopsis and grasses.
Nakashima K, Ito Y, Yamaguchi-Shinozaki K., Plant Physiol 149(1), 2009
PMID: 19126699
Arabidopsis NF-YB subunits LEC1 and LEC1-LIKE activate transcription by interacting with seed-specific ABRE-binding factors.
Yamamoto A, Kagaya Y, Toyoshima R, Kagaya M, Takeda S, Hattori T., Plant J 58(5), 2009
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A nuclear gene encoding the iron-sulfur subunit of mitochondrial complex II is regulated by B3 domain transcription factors during seed development in Arabidopsis.
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AtbZIP34 is required for Arabidopsis pollen wall patterning and the control of several metabolic pathways in developing pollen.
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Three Arabidopsis SnRK2 protein kinases, SRK2D/SnRK2.2, SRK2E/SnRK2.6/OST1 and SRK2I/SnRK2.3, involved in ABA signaling are essential for the control of seed development and dormancy.
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Defining core metabolic and transcriptomic responses to oxygen availability in rice embryos and young seedlings.
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Construction of a protein library of Arabidopsis transcription factors using a wheat cell-free protein production system and its application for DNA binding analysis.
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Identification of new ABA- and MEJA-activated sugarcane bZIP genes by data mining in the SUCEST database.
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Early developmental and stress responsive ESTs from mungbean, Vigna radiata (L.) Wilczek, seedlings.
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Genomic survey and gene expression analysis of the basic leucine zipper transcription factor family in rice.
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A bZIP transcription factor, OsABI5, is involved in rice fertility and stress tolerance.
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DNA-binding study identifies C-box and hybrid C/G-box or C/A-box motifs as high-affinity binding sites for STF1 and LONG HYPOCOTYL5 proteins.
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The Pseudomonas syringae type III effector HopAM1 enhances virulence on water-stressed plants.
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Development of abiotic stress tolerance via bZIP-type transcription factor LIP19 in common wheat.
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Tobacco transcription factors: novel insights into transcriptional regulation in the Solanaceae.
Rushton PJ, Bokowiec MT, Han S, Zhang H, Brannock JF, Chen X, Laudeman TW, Timko MP., Plant Physiol 147(1), 2008
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The F-box protein ACRE189/ACIF1 regulates cell death and defense responses activated during pathogen recognition in tobacco and tomato.
van den Burg HA, Tsitsigiannis DI, Rowland O, Lo J, Rallapalli G, Maclean D, Takken FL, Jones JD., Plant Cell 20(3), 2008
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Choose your partners: dimerization in eukaryotic transcription factors.
Amoutzias GD, Robertson DL, Van de Peer Y, Oliver SG., Trends Biochem Sci 33(5), 2008
PMID: 18406148
Post-translational regulation of plant bZIP factors.
Schütze K, Harter K, Chaban C., Trends Plant Sci 13(5), 2008
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A systematic survey in Arabidopsis thaliana of transcription factors that modulate circadian parameters.
Hanano S, Stracke R, Jakoby M, Merkle T, Domagalska MA, Weisshaar B, Davis SJ., BMC Genomics 9(), 2008
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Positive role of a wheat HvABI5 ortholog in abiotic stress response of seedlings.
Kobayashi F, Maeta E, Terashima A, Takumi S., Physiol Plant 134(1), 2008
PMID: 18433415
Deciphering gene regulatory networks that control seed development and maturation in Arabidopsis.
Santos-Mendoza M, Dubreucq B, Baud S, Parcy F, Caboche M, Lepiniec L., Plant J 54(4), 2008
PMID: 18476867
Identification of an Arabidopsis transmembrane bZIP transcription factor involved in the endoplasmic reticulum stress response.
Tajima H, Iwata Y, Iwano M, Takayama S, Koizumi N., Biochem Biophys Res Commun 374(2), 2008
PMID: 18634751
The role of bZIP transcription factors in green plant evolution: adaptive features emerging from four founder genes.
Corrêa LG, Riaño-Pachón DM, Schrago CG, dos Santos RV, Mueller-Roeber B, Vincentz M., PLoS One 3(8), 2008
PMID: 18698409
Positive role of a wheat HvABI5 ortholog in abiotic stress response of seedlings
Kobayashi F, Maeta E, Terashima A, Takumi S., Physiol Plant 134(1), 2008
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LebZIP2 induced by salt and drought stress and transient overexpression by Agrobacterium.
Seong ES, Kwon SS, Ghimire BK, Yu CY, Cho DH, Lim JD, Kim KS, Heo K, Lim ES, Chung IM, Kim MJ, Lee YS., BMB Rep 41(10), 2008
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Molecular titration and ultrasensitivity in regulatory networks.
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Gene expression analysis of cold treated versus cold acclimated Poncirus trifoliata
Meng Shasha, Dane Fenny, Si Ying, Ebel Robert, Zhang Cankui., Euphytica 164(1), 2008
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The family of DOF transcription factors: from green unicellular algae to vascular plants.
Moreno-Risueno MA, Martínez M, Vicente-Carbajosa J, Carbonero P., Mol Genet Genomics 277(4), 2007
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14-3-3 adaptor proteins are intermediates in ABA signal transduction during barley seed germination.
Schoonheim PJ, Sinnige MP, Casaretto JA, Veiga H, Bunney TD, Quatrano RS, de Boer AH., Plant J 49(2), 2007
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Metabolic control of seedling development by invertases
Bonfig KB, Berger S, Fatima T, Gonzalez MC, Roitsch T., Functional plant biology : FPB. 34(6), 2007
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Abscisic acid and stress signals induce Viviparous1 expression in seed and vegetative tissues of maize.
Cao X, Costa LM, Biderre-Petit C, Kbhaya B, Dey N, Perez P, McCarty DR, Gutierrez-Marcos JF, Becraft PW., Plant Physiol 143(2), 2007
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Differential expression of phenylpropanoid and related genes in brown-midrib bm1, bm2, bm3, and bm4 young near-isogenic maize plants.
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PlnTFDB: an integrative plant transcription factor database.
Riaño-Pachón DM, Ruzicic S, Dreyer I, Mueller-Roeber B., BMC Bioinformatics 8(), 2007
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Light-regulated transcriptional networks in higher plants.
Jiao Y, Lau OS, Deng XW., Nat Rev Genet 8(3), 2007
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Mapping diploid wheat homologues of Arabidopsis seed ABA signaling genes and QTLs for seed dormancy.
Nakamura S, Komatsuda T, Miura H., Theor Appl Genet 114(7), 2007
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The Arabidopsis AtbZIP9 protein fused to the VP16 transcriptional activation domain alters leaf and vascular development
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An early response regulatory cluster induced by low temperature and hydrogen peroxide in seedlings of chilling-tolerant japonica rice.
Cheng C, Yun KY, Ressom HW, Mohanty B, Bajic VB, Jia Y, Yun SJ, de los Reyes BG., BMC Genomics 8(), 2007
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A central integrator of transcription networks in plant stress and energy signalling.
Baena-González E, Rolland F, Thevelein JM, Sheen J., Nature 448(7156), 2007
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Identification of stress-tolerance-related transcription-factor genes via mini-scale Full-length cDNA Over-eXpressor (FOX) gene hunting system.
Fujita M, Mizukado S, Fujita Y, Ichikawa T, Nakazawa M, Seki M, Matsui M, Yamaguchi-Shinozaki K, Shinozaki K., Biochem Biophys Res Commun 364(2), 2007
PMID: 17937930
Regulation of a virus-induced lethal disease in tomato revealed by LongSAGE analysis.
Irian S, Xu P, Dai X, Zhao PX, Roossinck MJ., Mol Plant Microbe Interact 20(12), 2007
PMID: 17990955
Transcriptional regulation of ABI3- and ABA-responsive genes including RD29B and RD29A in seeds, germinating embryos, and seedlings of Arabidopsis.
Nakashima K, Fujita Y, Katsura K, Maruyama K, Narusaka Y, Seki M, Shinozaki K, Yamaguchi-Shinozaki K., Plant Mol Biol 60(1), 2006
PMID: 16463099
Transcriptional regulatory networks in cellular responses and tolerance to dehydration and cold stresses.
Yamaguchi-Shinozaki K, Shinozaki K., Annu Rev Plant Biol 57(), 2006
PMID: 16669782
Genome-wide analysis of the ERF gene family in Arabidopsis and rice.
Nakano T, Suzuki K, Fujimura T, Shinshi H., Plant Physiol 140(2), 2006
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Abscisic acid-dependent multisite phosphorylation regulates the activity of a transcription activator AREB1.
Furihata T, Maruyama K, Fujita Y, Umezawa T, Yoshida R, Shinozaki K, Yamaguchi-Shinozaki K., Proc Natl Acad Sci U S A 103(6), 2006
PMID: 16446457
An enhanced microsatellite map of diploid Fragaria.
Sargent DJ, Clarke J, Simpson DW, Tobutt KR, Arús P, Monfort A, Vilanova S, Denoyes-Rothan B, Rousseau M, Folta KM, Bassil NV, Battey NH., Theor Appl Genet 112(7), 2006
PMID: 16505996
In vivo binding of hot pepper bZIP transcription factor CabZIP1 to the G-box region of pathogenesis-related protein 1 promoter.
Lee BJ, Park CJ, Kim SK, Kim KJ, Paek KH., Biochem Biophys Res Commun 344(1), 2006
PMID: 16630556
Two-hybrid protein-protein interaction analysis in Arabidopsis protoplasts: establishment of a heterodimerization map of group C and group S bZIP transcription factors.
Ehlert A, Weltmeier F, Wang X, Mayer CS, Smeekens S, Vicente-Carbajosa J, Dröge-Laser W., Plant J 46(5), 2006
PMID: 16709202
Combinatorial control of Arabidopsis proline dehydrogenase transcription by specific heterodimerisation of bZIP transcription factors.
Weltmeier F, Ehlert A, Mayer CS, Dietrich K, Wang X, Schütze K, Alonso R, Harter K, Vicente-Carbajosa J, Dröge-Laser W., EMBO J 25(13), 2006
PMID: 16810321
Tissue expression map of a large number of expressed sequence tags and its application to in silico screening of stress response genes in common wheat.
Mochida K, Kawaura K, Shimosaka E, Kawakami N, Shin-I T, Kohara Y, Yamazaki Y, Ogihara Y., Mol Genet Genomics 276(3), 2006
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Role of DREB transcription factors in abiotic and biotic stress tolerance in plants.
Agarwal PK, Agarwal P, Reddy MK, Sopory SK., Plant Cell Rep 25(12), 2006
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Molecular and functional analysis of new members of the wheat PR4 gene family.
Bertini L, Cascone A, Tucci M, D'Amore R, Di Berardino I, Buonocore V, Caporale C, Caruso C., Biol Chem 387(8), 2006
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Expression patterns of low temperature responsive genes in a dominant ABA-less-sensitive mutant line of common wheat
Kobayashi F, Takumi S, Egawa C, Ishibashi M, Nakamura C., Physiol Plant 127(4), 2006
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bZIP10-LSD1 antagonism modulates basal defense and cell death in Arabidopsis following infection.
Kaminaka H, Näke C, Epple P, Dittgen J, Schütze K, Chaban C, Holt BF, Merkle T, Schäfer E, Harter K, Dangl JL., EMBO J 25(18), 2006
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Cloning of DOG1, a quantitative trait locus controlling seed dormancy in Arabidopsis.
Bentsink L, Jowett J, Hanhart CJ, Koornneef M., Proc Natl Acad Sci U S A 103(45), 2006
PMID: 17065317
delayed flowering1 Encodes a basic leucine zipper protein that mediates floral inductive signals at the shoot apex in maize.
Muszynski MG, Dam T, Li B, Shirbroun DM, Hou Z, Bruggemann E, Archibald R, Ananiev EV, Danilevskaya ON., Plant Physiol 142(4), 2006
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Arabidopsis NRP1 and NRP2 encode histone chaperones and are required for maintaining postembryonic root growth.
Zhu Y, Dong A, Meyer D, Pichon O, Renou JP, Cao K, Shen WH., Plant Cell 18(11), 2006
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KEEP ON GOING, a RING E3 ligase essential for Arabidopsis growth and development, is involved in abscisic acid signaling.
Stone SL, Williams LA, Farmer LM, Vierstra RD, Callis J., Plant Cell 18(12), 2006
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Plant defence responses: what have we learnt from Arabidopsis?
Thatcher LF, Anderson JP, Singh KB., Functional plant biology : FPB. 32(1), 2005
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Eulgem T., Trends Plant Sci 10(2), 2005
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Salicylic acid-inducible Arabidopsis CK2-like activity phosphorylates TGA2.
Kang HG, Klessig DF., Plant Mol Biol 57(4), 2005
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BLADE-ON-PETIOLE-dependent signaling controls leaf and floral patterning in Arabidopsis.
Hepworth SR, Zhang Y, McKim S, Li X, Haughn GW., Plant Cell 17(5), 2005
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Identification of a region of the Arabidopsis AtAOX1a promoter necessary for mitochondrial retrograde regulation of expression.
Dojcinovic D, Krosting J, Harris AJ, Wagner DJ, Rhoads DM., Plant Mol Biol 58(2), 2005
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Global transcript profiling of primary stems from Arabidopsis thaliana identifies candidate genes for missing links in lignin biosynthesis and transcriptional regulators of fiber differentiation.
Ehlting J, Mattheus N, Aeschliman DS, Li E, Hamberger B, Cullis IF, Zhuang J, Kaneda M, Mansfield SD, Samuels L, Ritland K, Ellis BE, Bohlmann J, Douglas CJ., Plant J 42(5), 2005
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LUX ARRHYTHMO encodes a Myb domain protein essential for circadian rhythms.
Hazen SP, Schultz TF, Pruneda-Paz JL, Borevitz JO, Ecker JR, Kay SA., Proc Natl Acad Sci U S A 102(29), 2005
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LIP19, a basic region leucine zipper protein, is a Fos-like molecular switch in the cold signaling of rice plants.
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Molecular cloning and characterization of a novel soybean gene encoding a leucine-zipper-like protein induced to salt stress.
Aoki A, Kanegami A, Mihara M, Kojima T, Shiraiwa M, Takahara H., Gene 356(), 2005
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Alteration of TGA factor activity in rice results in enhanced tolerance to Xanthomonas oryzae pv. oryzae.
Fitzgerald HA, Canlas PE, Chern MS, Ronald PC., Plant J 43(3), 2005
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Isolation and functional characterisation of two new bZIP maize regulators of the ABA responsive gene rab28.
Nieva C, Busk PK, Domínguez-Puigjaner E, Lumbreras V, Testillano PS, Risueño MC, Pagès M., Plant Mol Biol 58(6), 2005
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Redundant and distinct functions of the ABA response loci ABA-INSENSITIVE(ABI)5 and ABRE-BINDING FACTOR (ABF)3.
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The Arabidopsis cold-responsive transcriptome and its regulation by ICE1.
Lee BH, Henderson DA, Zhu JK., Plant Cell 17(11), 2005
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Identification of cadmium-regulated genes by cDNA-AFLP in the heavy metal accumulator Brassica juncea L.
Fusco N, Micheletto L, Dal Corso G, Borgato L, Furini A., J Exp Bot 56(421), 2005
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Transcriptome and selected metabolite analyses reveal multiple points of ethylene control during tomato fruit development.
Alba R, Payton P, Fei Z, McQuinn R, Debbie P, Martin GB, Tanksley SD, Giovannoni JJ., Plant Cell 17(11), 2005
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AREB1 is a transcription activator of novel ABRE-dependent ABA signaling that enhances drought stress tolerance in Arabidopsis.
Fujita Y, Fujita M, Satoh R, Maruyama K, Parvez MM, Seki M, Hiratsu K, Ohme-Takagi M, Shinozaki K, Yamaguchi-Shinozaki K., Plant Cell 17(12), 2005
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Expression profiles of hot pepper (Capsicum annum) genes under cold stress conditions.
Hwang EW, Kim KA, Park SC, Jeong MJ, Byun MO, Kwon HB., J Biosci 30(5), 2005
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Systemic acquired resistance.
Durrant WE, Dong X., Annu Rev Phytopathol 42(), 2004
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Three Arabidopsis MBF1 homologs with distinct expression profiles play roles as transcriptional co-activators.
Tsuda K, Tsuji T, Hirose S, Yamazaki K., Plant Cell Physiol 45(2), 2004
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Genome-wide identification of Arabidopsis coiled-coil proteins and establishment of the ARABI-COIL database.
Rose A, Manikantan S, Schraegle SJ, Maloy MA, Stahlberg EA, Meier I., Plant Physiol 134(3), 2004
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A novel subgroup of bZIP proteins functions as transcriptional activators in hypoosmolarity-responsive expression of the ProDH gene in Arabidopsis.
Satoh R, Fujita Y, Nakashima K, Shinozaki K, Yamaguchi-Shinozaki K., Plant Cell Physiol 45(3), 2004
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The tobacco bZIP transcription factor BZI-1 binds the GH3 promoter in vivo and modulates auxin-induced transcription.
Heinekamp T, Strathmann A, Kuhlmann M, Froissard M, Müller A, Perrot-Rechenmann C, Dröge-Laser W., Plant J 38(2), 2004
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Gene expression signatures from three genetically separable resistance gene signaling pathways for downy mildew resistance.
Eulgem T, Weigman VJ, Chang HS, McDowell JM, Holub EB, Glazebrook J, Zhu T, Dangl JL., Plant Physiol 135(2), 2004
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Predicting N-terminal myristoylation sites in plant proteins.
Podell S, Gribskov M., BMC Genomics 5(1), 2004
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A conserved upstream open reading frame mediates sucrose-induced repression of translation.
Wiese A, Elzinga N, Wobbes B, Smeekens S., Plant Cell 16(7), 2004
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Dimerization specificity of all 67 B-ZIP motifs in Arabidopsis thaliana: a comparison to Homo sapiens B-ZIP motifs.
Deppmann CD, Acharya A, Rishi V, Wobbes B, Smeekens S, Taparowsky EJ, Vinson C., Nucleic Acids Res 32(11), 2004
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Expression, purification and characterization of a novel bZIP protein from sugarcane.
Schlogl PS, Kobarg J, Moreau VH, Leite A, Sabino AA, Eberlin MN, Menossi M., Plant Sci 167(3), 2004
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Visualization of protein interactions in living plant cells using bimolecular fluorescence complementation.
Walter M, Chaban C, Schütze K, Batistic O, Weckermann K, Näke C, Blazevic D, Grefen C, Schumacher K, Oecking C, Harter K, Kudla J., Plant J 40(3), 2004
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Conservation between animals and plants of the cis-acting element involved in the unfolded protein response.
Oh DH, Kwon CS, Sano H, Chung WI, Koizumi N., Biochem Biophys Res Commun 301(1), 2003
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Non-self recognition, transcriptional reprogramming, and secondary metabolite accumulation during plant/pathogen interactions.
Hahlbrock K, Bednarek P, Ciolkowski I, Hamberger B, Heise A, Liedgens H, Logemann E, Nürnberger T, Schmelzer E, Somssich IE, Tan J., Proc Natl Acad Sci U S A 100 Suppl 2(), 2003
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Viviparous1 alters global gene expression patterns through regulation of abscisic acid signaling.
Suzuki M, Ketterling MG, Li QB, McCarty DR., Plant Physiol 132(3), 2003
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Functional analysis of RF2a, a rice transcription factor.
Dai S, Petruccelli S, Ordiz MI, Zhang Z, Chen S, Beachy RN., J Biol Chem 278(38), 2003
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Genome-wide comparative phylogenetic analysis of the rice and Arabidopsis Dof gene families.
Lijavetzky D, Carbonero P, Vicente-Carbajosa J., BMC Evol Biol 3(), 2003
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The Arabidopsis basic/helix-loop-helix transcription factor family.
Toledo-Ortiz G, Huq E, Quail PH., Plant Cell 15(8), 2003
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Monitoring expression profiles of rice genes under cold, drought, and high-salinity stresses and abscisic acid application using cDNA microarray and RNA gel-blot analyses.
Rabbani MA, Maruyama K, Abe H, Khan MA, Katsura K, Ito Y, Yoshiwara K, Seki M, Shinozaki K, Yamaguchi-Shinozaki K., Plant Physiol 133(4), 2003
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The homologous ABI5 and EEL transcription factors function antagonistically to fine-tune gene expression during late embryogenesis.
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Abscisic Acid biosynthesis and response.
Finkelstein RR, Rock CD., Arabidopsis Book 1(), 2002
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