The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity
Heim MA, Jakoby M, Werber M, Martin C, Weisshaar B, Bailey PC (2003)
Molecular Biology and Evolution 20(5): 735-747.
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Autor*in
Heim, M.A.;
Jakoby, M.;
Werber, M.;
Martin, Cathie;
Weisshaar, BerndUniBi
;
Bailey, P.C.
![](https://pub.uni-bielefeld.de/images/icon_orcid.png)
Einrichtung
Abstract / Bemerkung
Basic helix-loop-helix (bHLH) transcription factors (TFs) belong to a family of transcriptional regulators present in three eukaryotic kingdoms. Many different functions have been identified for these proteins in animals, including the control of cell proliferation and development of specific cell lineages. Their mechanism for controlling gene transcription often involves homodimerization or heterodimerization. In plants, little is known about the bHLH family, but we have determined that there are 133 bHLH genes in Arabidopsis thaliana and have confirmed that at least 113 of them are expressed. The AtbHLH genes constitute one of the largest families of transcription factors in A. thaliana with significantly more members than are found in most animal species and about an equivalent number to those in vertebrates. Comparisons with animal sequences suggest that the majority of plant bHLH genes have evolved from the ancestral group B class of bHLH genes. By studying the AtbHLH genes collectively, twelve subfamilies have been identified. Within each of these main groups, there are conserved amino acid sequence motifs outside the DNA binding domain. Potential gene redundancy among members of smaller subgroups has been analyzed, and the resulting information is presented to provide a simplified visual interpretation of the gene family, identifying related genes that are likely to share similar functions. Based on the current characterization of a limited number of plant bHLH proteins, we predict that this family of TFs has a range of different roles in plant cell and tissue development as well as plant metabolism.
Erscheinungsjahr
2003
Zeitschriftentitel
Molecular Biology and Evolution
Band
20
Ausgabe
5
Seite(n)
735-747
ISSN
0737-4038
eISSN
1537-1719
Page URI
https://pub.uni-bielefeld.de/record/1867691
Zitieren
Heim MA, Jakoby M, Werber M, Martin C, Weisshaar B, Bailey PC. The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity. Molecular Biology and Evolution. 2003;20(5):735-747.
Heim, M. A., Jakoby, M., Werber, M., Martin, C., Weisshaar, B., & Bailey, P. C. (2003). The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity. Molecular Biology and Evolution, 20(5), 735-747. https://doi.org/10.1093/molbev/msg088
Heim, M.A., Jakoby, M., Werber, M., Martin, Cathie, Weisshaar, Bernd, and Bailey, P.C. 2003. “The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity”. Molecular Biology and Evolution 20 (5): 735-747.
Heim, M. A., Jakoby, M., Werber, M., Martin, C., Weisshaar, B., and Bailey, P. C. (2003). The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity. Molecular Biology and Evolution 20, 735-747.
Heim, M.A., et al., 2003. The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity. Molecular Biology and Evolution, 20(5), p 735-747.
M.A. Heim, et al., “The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity”, Molecular Biology and Evolution, vol. 20, 2003, pp. 735-747.
Heim, M.A., Jakoby, M., Werber, M., Martin, C., Weisshaar, B., Bailey, P.C.: The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity. Molecular Biology and Evolution. 20, 735-747 (2003).
Heim, M.A., Jakoby, M., Werber, M., Martin, Cathie, Weisshaar, Bernd, and Bailey, P.C. “The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity”. Molecular Biology and Evolution 20.5 (2003): 735-747.
Daten bereitgestellt von European Bioinformatics Institute (EBI)
EMBL
INTERPRO
1 Eintrag gefunden, die diesen Artikel zitieren
bHLH_ZIP_TF (INTERPRO: IPR024097)
Protein family/domain name: Basic helix-loop-helix leucine zipper transcription factor
Protein family/domain name: Basic helix-loop-helix leucine zipper transcription factor
UNIPROT
212 Einträge gefunden, die diesen Artikel zitieren von denen 10 angezeigt werden
Transcription factor bHLH25 (UNIPROT: Q9T072)
Organism: Arabidopsis thaliana
Download in FASTA format
Organism: Arabidopsis thaliana
Download in FASTA format
Transcription factor bHLH115 (UNIPROT: F4I7Z3)
Organism: Arabidopsis thaliana
Download in FASTA format
Organism: Arabidopsis thaliana
Download in FASTA format
Transcription factor bHLH129 (UNIPROT: Q9ZW81)
Organism: Arabidopsis thaliana
Download in FASTA format
Organism: Arabidopsis thaliana
Download in FASTA format
Transcription factor bHLH115 (UNIPROT: Q9C682)
Organism: Arabidopsis thaliana
Download in FASTA format
Organism: Arabidopsis thaliana
Download in FASTA format
Transcription factor bHLH35 (UNIPROT: F4KAJ4)
Organism: Arabidopsis thaliana
Download in FASTA format
Organism: Arabidopsis thaliana
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Transcription factor bHLH110 (UNIPROT: Q9SFZ3)
Organism: Arabidopsis thaliana
Download in FASTA format
Organism: Arabidopsis thaliana
Download in FASTA format
Transcription factor bHLH126 (UNIPROT: Q9STJ6)
Organism: Arabidopsis thaliana
Download in FASTA format
Organism: Arabidopsis thaliana
Download in FASTA format
Transcription factor bHLH109 (UNIPROT: Q5XVH0)
Organism: Arabidopsis thaliana
Download in FASTA format
Organism: Arabidopsis thaliana
Download in FASTA format
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Identification of Norway Spruce MYB-bHLH-WDR Transcription Factor Complex Members Linked to Regulation of the Flavonoid Pathway.
Nemesio-Gorriz M, Blair PB, Dalman K, Hammerbacher A, Arnerup J, Stenlid J, Mukhtar SM, Elfstrand M., Front Plant Sci 8(), 2017
PMID: 28337212
Nemesio-Gorriz M, Blair PB, Dalman K, Hammerbacher A, Arnerup J, Stenlid J, Mukhtar SM, Elfstrand M., Front Plant Sci 8(), 2017
PMID: 28337212
Development of Molecular Markers for Iron Metabolism Related Genes in Lentil and Their Expression Analysis under Excess Iron Stress.
Sen Gupta D, McPhee K, Kumar S., Front Plant Sci 8(), 2017
PMID: 28450880
Sen Gupta D, McPhee K, Kumar S., Front Plant Sci 8(), 2017
PMID: 28450880
Reconstitution of Abscisic Acid Signaling from the Receptor to DNA via bHLH Transcription Factors.
Takahashi Y, Ebisu Y, Shimazaki KI., Plant Physiol 174(2), 2017
PMID: 28438792
Takahashi Y, Ebisu Y, Shimazaki KI., Plant Physiol 174(2), 2017
PMID: 28438792
Two DELLA-interacting proteins bHLH48 and bHLH60 regulate flowering under long-day conditions in Arabidopsis thaliana.
Li Y, Wang H, Li X, Liang G, Yu D., J Exp Bot 68(11), 2017
PMID: 28591805
Li Y, Wang H, Li X, Liang G, Yu D., J Exp Bot 68(11), 2017
PMID: 28591805
Transcriptome Profiling of Tomato Uncovers an Involvement of Cytochrome P450s and Peroxidases in Stigma Color Formation.
Zhang Y, Zhao G, Li Y, Zhang J, Shi M, Muhammad T, Liang Y., Front Plant Sci 8(), 2017
PMID: 28620401
Zhang Y, Zhao G, Li Y, Zhang J, Shi M, Muhammad T, Liang Y., Front Plant Sci 8(), 2017
PMID: 28620401
The quest for epigenetic regulation underlying unisexual flower development in Cucumis melo.
Latrasse D, Rodriguez-Granados NY, Veluchamy A, Mariappan KG, Bevilacqua C, Crapart N, Camps C, Sommard V, Raynaud C, Dogimont C, Boualem A, Benhamed M, Bendahmane A., Epigenetics Chromatin 10(), 2017
PMID: 28592995
Latrasse D, Rodriguez-Granados NY, Veluchamy A, Mariappan KG, Bevilacqua C, Crapart N, Camps C, Sommard V, Raynaud C, Dogimont C, Boualem A, Benhamed M, Bendahmane A., Epigenetics Chromatin 10(), 2017
PMID: 28592995
Generation, Annotation, and Analysis of a Large-Scale Expressed Sequence Tag Library from Arabidopsis pumila to Explore Salt-Responsive Genes.
Huang X, Yang L, Jin Y, Lin J, Liu F., Front Plant Sci 8(), 2017
PMID: 28638397
Huang X, Yang L, Jin Y, Lin J, Liu F., Front Plant Sci 8(), 2017
PMID: 28638397
The function of OsbHLH068 is partially redundant with its homolog, AtbHLH112, in the regulation of the salt stress response but has opposite functions to control flowering in Arabidopsis.
Chen HC, Hsieh-Feng V, Liao PC, Cheng WH, Liu LY, Yang YW, Lai MH, Chang MC., Plant Mol Biol 94(4-5), 2017
PMID: 28631168
Chen HC, Hsieh-Feng V, Liao PC, Cheng WH, Liu LY, Yang YW, Lai MH, Chang MC., Plant Mol Biol 94(4-5), 2017
PMID: 28631168
The Soybean Basic Helix-Loop-Helix Transcription Factor ORG3-Like Enhances Cadmium Tolerance via Increased Iron and Reduced Cadmium Uptake and Transport from Roots to Shoots.
Xu Z, Liu X, He X, Xu L, Huang Y, Shao H, Zhang D, Tang B, Ma H., Front Plant Sci 8(), 2017
PMID: 28702035
Xu Z, Liu X, He X, Xu L, Huang Y, Shao H, Zhang D, Tang B, Ma H., Front Plant Sci 8(), 2017
PMID: 28702035
The genetic architecture of UV floral patterning in sunflower.
Moyers BT, Owens GL, Baute GJ, Rieseberg LH., Ann Bot 120(1), 2017
PMID: 28459939
Moyers BT, Owens GL, Baute GJ, Rieseberg LH., Ann Bot 120(1), 2017
PMID: 28459939
Genome-wide analysis of basic/helix-loop-helix gene family in peanut and assessment of its roles in pod development.
Gao C, Sun J, Wang C, Dong Y, Xiao S, Wang X, Jiao Z., PLoS One 12(7), 2017
PMID: 28750081
Gao C, Sun J, Wang C, Dong Y, Xiao S, Wang X, Jiao Z., PLoS One 12(7), 2017
PMID: 28750081
Genome-wide analysis of basic helix-loop-helix (bHLH) transcription factors in Brachypodium distachyon.
Niu X, Guan Y, Chen S, Li H., BMC Genomics 18(1), 2017
PMID: 28810832
Niu X, Guan Y, Chen S, Li H., BMC Genomics 18(1), 2017
PMID: 28810832
Comparative transcriptome analysis reveals differentially expressed genes associated with sex expression in garden asparagus (Asparagus officinalis).
Li SF, Zhang GJ, Zhang XJ, Yuan JH, Deng CL, Gao WJ., BMC Plant Biol 17(1), 2017
PMID: 28830346
Li SF, Zhang GJ, Zhang XJ, Yuan JH, Deng CL, Gao WJ., BMC Plant Biol 17(1), 2017
PMID: 28830346
The G-Box Transcriptional Regulatory Code in Arabidopsis.
Ezer D, Shepherd SJK, Brestovitsky A, Dickinson P, Cortijo S, Charoensawan V, Box MS, Biswas S, Jaeger KE, Wigge PA., Plant Physiol 175(2), 2017
PMID: 28864470
Ezer D, Shepherd SJK, Brestovitsky A, Dickinson P, Cortijo S, Charoensawan V, Box MS, Biswas S, Jaeger KE, Wigge PA., Plant Physiol 175(2), 2017
PMID: 28864470
Genome-Wide Association Study of Major Agronomic Traits Related to Domestication in Peanut.
Zhang X, Zhang J, He X, Wang Y, Ma X, Yin D., Front Plant Sci 8(), 2017
PMID: 29018458
Zhang X, Zhang J, He X, Wang Y, Ma X, Yin D., Front Plant Sci 8(), 2017
PMID: 29018458
The ethylene response factor AtERF4 negatively regulates the iron deficiency response in Arabidopsis thaliana.
Liu W, Karemera NJU, Wu T, Yang Y, Zhang X, Xu X, Wang Y, Han Z., PLoS One 12(10), 2017
PMID: 29045490
Liu W, Karemera NJU, Wu T, Yang Y, Zhang X, Xu X, Wang Y, Han Z., PLoS One 12(10), 2017
PMID: 29045490
A Radish Basic Helix-Loop-Helix Transcription Factor, RsTT8 Acts a Positive Regulator for Anthocyanin Biosynthesis.
Lim SH, Kim DH, Kim JK, Lee JY, Ha SH., Front Plant Sci 8(), 2017
PMID: 29167678
Lim SH, Kim DH, Kim JK, Lee JY, Ha SH., Front Plant Sci 8(), 2017
PMID: 29167678
Transcriptome analysis of Crossostephium chinensis provides insight into the molecular basis of salinity stress responses.
Yang H, Sun M, Lin S, Guo Y, Yang Y, Zhang T, Zhang J., PLoS One 12(11), 2017
PMID: 29131853
Yang H, Sun M, Lin S, Guo Y, Yang Y, Zhang T, Zhang J., PLoS One 12(11), 2017
PMID: 29131853
Transcriptomic Analysis Reveals Transcription Factors Related to Leaf Anthocyanin Biosynthesis in Paeonia qiui.
Luo J, Duan J, Huo D, Shi Q, Niu L, Zhang Y., Molecules 22(12), 2017
PMID: 29292771
Luo J, Duan J, Huo D, Shi Q, Niu L, Zhang Y., Molecules 22(12), 2017
PMID: 29292771
Genome-wide characterization and expression analysis of common bean bHLH transcription factors in response to excess salt concentration.
Kavas M, Baloğlu MC, Atabay ES, Ziplar UT, Daşgan HY, Ünver T., Mol Genet Genomics 291(1), 2016
PMID: 26193947
Kavas M, Baloğlu MC, Atabay ES, Ziplar UT, Daşgan HY, Ünver T., Mol Genet Genomics 291(1), 2016
PMID: 26193947
RNA-Seq mediated root transcriptome analysis of Chlorophytum borivilianum for identification of genes involved in saponin biosynthesis.
Kumar S, Kalra S, Singh B, Kumar A, Kaur J, Singh K., Funct Integr Genomics 16(1), 2016
PMID: 26458557
Kumar S, Kalra S, Singh B, Kumar A, Kaur J, Singh K., Funct Integr Genomics 16(1), 2016
PMID: 26458557
The bHLH Transcription Factors TSAR1 and TSAR2 Regulate Triterpene Saponin Biosynthesis in Medicago truncatula.
Mertens J, Pollier J, Vanden Bossche R, Lopez-Vidriero I, Franco-Zorrilla JM, Goossens A., Plant Physiol 170(1), 2016
PMID: 26589673
Mertens J, Pollier J, Vanden Bossche R, Lopez-Vidriero I, Franco-Zorrilla JM, Goossens A., Plant Physiol 170(1), 2016
PMID: 26589673
A bHLH gene from Tamarix hispida improves abiotic stress tolerance by enhancing osmotic potential and decreasing reactive oxygen species accumulation.
Ji X, Nie X, Liu Y, Zheng L, Zhao H, Zhang B, Huo L, Wang Y., Tree Physiol 36(2), 2016
PMID: 26786541
Ji X, Nie X, Liu Y, Zheng L, Zhao H, Zhang B, Huo L, Wang Y., Tree Physiol 36(2), 2016
PMID: 26786541
Overexpression of MdbHLH104 gene enhances the tolerance to iron deficiency in apple.
Zhao Q, Ren YR, Wang QJ, Yao YX, You CX, Hao YJ., Plant Biotechnol J 14(7), 2016
PMID: 26801352
Zhao Q, Ren YR, Wang QJ, Yao YX, You CX, Hao YJ., Plant Biotechnol J 14(7), 2016
PMID: 26801352
Two LcbHLH Transcription Factors Interacting with LcMYB1 in Regulating Late Structural Genes of Anthocyanin Biosynthesis in Nicotiana and Litchi chinensis During Anthocyanin Accumulation.
Lai B, Du LN, Liu R, Hu B, Su WB, Qin YH, Zhao JT, Wang HC, Hu GB., Front Plant Sci 7(), 2016
PMID: 26925082
Lai B, Du LN, Liu R, Hu B, Su WB, Qin YH, Zhao JT, Wang HC, Hu GB., Front Plant Sci 7(), 2016
PMID: 26925082
Genetic architecture, biochemical underpinnings and ecological impact of floral UV patterning.
Brock MT, Lucas LK, Anderson NA, Rubin MJ, Markelz RJ, Covington MF, Devisetty UK, Chapple C, Maloof JN, Weinig C., Mol Ecol 25(5), 2016
PMID: 26800256
Brock MT, Lucas LK, Anderson NA, Rubin MJ, Markelz RJ, Covington MF, Devisetty UK, Chapple C, Maloof JN, Weinig C., Mol Ecol 25(5), 2016
PMID: 26800256
Two bHLH Transcription Factors, bHLH34 and bHLH104, Regulate Iron Homeostasis in Arabidopsis thaliana.
Li X, Zhang H, Ai Q, Liang G, Yu D., Plant Physiol 170(4), 2016
PMID: 26921305
Li X, Zhang H, Ai Q, Liang G, Yu D., Plant Physiol 170(4), 2016
PMID: 26921305
The Tomato Hoffman's Anthocyaninless Gene Encodes a bHLH Transcription Factor Involved in Anthocyanin Biosynthesis That Is Developmentally Regulated and Induced by Low Temperatures.
Qiu Z, Wang X, Gao J, Guo Y, Huang Z, Du Y., PLoS One 11(3), 2016
PMID: 26943362
Qiu Z, Wang X, Gao J, Guo Y, Huang Z, Du Y., PLoS One 11(3), 2016
PMID: 26943362
Identification of Multiple Stress Responsive Genes by Sequencing a Normalized cDNA Library from Sea-Land Cotton (Gossypium barbadense L.).
Zhou B, Zhang L, Ullah A, Jin X, Yang X, Zhang X., PLoS One 11(3), 2016
PMID: 27031331
Zhou B, Zhang L, Ullah A, Jin X, Yang X, Zhang X., PLoS One 11(3), 2016
PMID: 27031331
Jasmonates: signal transduction components and their roles in environmental stress responses.
Goossens J, Fernández-Calvo P, Schweizer F, Goossens A., Plant Mol Biol 91(6), 2016
PMID: 27086135
Goossens J, Fernández-Calvo P, Schweizer F, Goossens A., Plant Mol Biol 91(6), 2016
PMID: 27086135
Evolutionary divergence of phytochrome protein function in Zea mays PIF3 signaling.
Kumar I, Swaminathan K, Hudson K, Hudson ME., J Exp Bot 67(14), 2016
PMID: 27262126
Kumar I, Swaminathan K, Hudson K, Hudson ME., J Exp Bot 67(14), 2016
PMID: 27262126
Two Figla homologues have disparate functions during sex differentiation in half-smooth tongue sole (Cynoglossus semilaevis).
Li H, Xu W, Zhang N, Shao C, Zhu Y, Dong Z, Wang N, Jia X, Xu H, Chen S., Sci Rep 6(), 2016
PMID: 27313147
Li H, Xu W, Zhang N, Shao C, Zhu Y, Dong Z, Wang N, Jia X, Xu H, Chen S., Sci Rep 6(), 2016
PMID: 27313147
The SAC51 Family Plays a Central Role in Thermospermine Responses in Arabidopsis.
Cai Q, Fukushima H, Yamamoto M, Ishii N, Sakamoto T, Kurata T, Motose H, Takahashi T., Plant Cell Physiol 57(8), 2016
PMID: 27388339
Cai Q, Fukushima H, Yamamoto M, Ishii N, Sakamoto T, Kurata T, Motose H, Takahashi T., Plant Cell Physiol 57(8), 2016
PMID: 27388339
Transcriptomic Analysis of Multipurpose Timber Yielding Tree Neolamarckia cadamba during Xylogenesis Using RNA-Seq.
Ouyang K, Li J, Zhao X, Que Q, Li P, Huang H, Deng X, Singh SK, Wu AM, Chen X., PLoS One 11(7), 2016
PMID: 27438485
Ouyang K, Li J, Zhao X, Que Q, Li P, Huang H, Deng X, Singh SK, Wu AM, Chen X., PLoS One 11(7), 2016
PMID: 27438485
Two IIIf Clade-bHLHs from Freesia hybrida Play Divergent Roles in Flavonoid Biosynthesis and Trichome Formation when Ectopically Expressed in Arabidopsis.
Li Y, Shan X, Gao R, Yang S, Wang S, Gao X, Wang L., Sci Rep 6(), 2016
PMID: 27465838
Li Y, Shan X, Gao R, Yang S, Wang S, Gao X, Wang L., Sci Rep 6(), 2016
PMID: 27465838
The basic helix-loop-helix transcription factor BIS2 is essential for monoterpenoid indole alkaloid production in the medicinal plant Catharanthus roseus.
Van Moerkercke A, Steensma P, Gariboldi I, Espoz J, Purnama PC, Schweizer F, Miettinen K, Vanden Bossche R, De Clercq R, Memelink J, Goossens A., Plant J 88(1), 2016
PMID: 27342401
Van Moerkercke A, Steensma P, Gariboldi I, Espoz J, Purnama PC, Schweizer F, Miettinen K, Vanden Bossche R, De Clercq R, Memelink J, Goossens A., Plant J 88(1), 2016
PMID: 27342401
Regulation of plant secondary metabolism and associated specialized cell development by MYBs and bHLHs.
Chezem WR, Clay NK., Phytochemistry 131(), 2016
PMID: 27569707
Chezem WR, Clay NK., Phytochemistry 131(), 2016
PMID: 27569707
Hydrogen cyanamide breaks grapevine bud dormancy in the summer through transient activation of gene expression and accumulation of reactive oxygen and nitrogen species.
Sudawan B, Chang CS, Chao HF, Ku MS, Yen YF., BMC Plant Biol 16(1), 2016
PMID: 27627883
Sudawan B, Chang CS, Chao HF, Ku MS, Yen YF., BMC Plant Biol 16(1), 2016
PMID: 27627883
Transcriptome Analysis of Stem and Globally Comparison with Other Tissues in Brassica napus.
Miao L, Zhang L, Raboanatahiry N, Lu G, Zhang X, Xiang J, Gan J, Fu C, Li M., Front Plant Sci 7(), 2016
PMID: 27708656
Miao L, Zhang L, Raboanatahiry N, Lu G, Zhang X, Xiang J, Gan J, Fu C, Li M., Front Plant Sci 7(), 2016
PMID: 27708656
Clade IVa Basic Helix-Loop-Helix Transcription Factors Form Part of a Conserved Jasmonate Signaling Circuit for the Regulation of Bioactive Plant Terpenoid Biosynthesis.
Mertens J, Van Moerkercke A, Vanden Bossche R, Pollier J, Goossens A., Plant Cell Physiol 57(12), 2016
PMID: 27694525
Mertens J, Van Moerkercke A, Vanden Bossche R, Pollier J, Goossens A., Plant Cell Physiol 57(12), 2016
PMID: 27694525
A SNP-Enabled Assessment of Genetic Diversity, Evolutionary Relationships and the Identification of Candidate Genes in Chrysanthemum.
Chong X, Zhang F, Wu Y, Yang X, Zhao N, Wang H, Guan Z, Fang W, Chen F., Genome Biol Evol 8(12), 2016
PMID: 28082602
Chong X, Zhang F, Wu Y, Yang X, Zhao N, Wang H, Guan Z, Fang W, Chen F., Genome Biol Evol 8(12), 2016
PMID: 28082602
Genome-wide identification and analysis of basic helix-loop-helix domains in dog, Canis lupus familiaris.
Wang XH, Wang Y, Liu AK, Liu XT, Zhou Y, Yao Q, Chen KP., Mol Genet Genomics 290(2), 2015
PMID: 25403511
Wang XH, Wang Y, Liu AK, Liu XT, Zhou Y, Yao Q, Chen KP., Mol Genet Genomics 290(2), 2015
PMID: 25403511
Iron-binding E3 ligase mediates iron response in plants by targeting basic helix-loop-helix transcription factors.
Selote D, Samira R, Matthiadis A, Gillikin JW, Long TA., Plant Physiol 167(1), 2015
PMID: 25452667
Selote D, Samira R, Matthiadis A, Gillikin JW, Long TA., Plant Physiol 167(1), 2015
PMID: 25452667
Anthocyanin biosynthesis for cold and freezing stress tolerance and desirable color in Brassica rapa.
Ahmed NU, Park JI, Jung HJ, Hur Y, Nou IS., Funct Integr Genomics 15(4), 2015
PMID: 25504198
Ahmed NU, Park JI, Jung HJ, Hur Y, Nou IS., Funct Integr Genomics 15(4), 2015
PMID: 25504198
The Arabidopsis thaliana TCP transcription factors: A broadening horizon beyond development.
Li S., Plant Signal Behav 10(7), 2015
PMID: 26039357
Li S., Plant Signal Behav 10(7), 2015
PMID: 26039357
Overexpressing CAPRICE and GLABRA3 did not change the anthocyanin content of tomato (Solanum lycopersicum) fruit peel.
Wada T, Onishi M, Kunihiro A, Tominaga-Wada R., Plant Signal Behav 10(5), 2015
PMID: 26039466
Wada T, Onishi M, Kunihiro A, Tominaga-Wada R., Plant Signal Behav 10(5), 2015
PMID: 26039466
Extensive Transcriptome Changes Underlying the Flower Color Intensity Variation in Paeonia ostii.
Gao L, Yang H, Liu H, Yang J, Hu Y., Front Plant Sci 6(), 2015
PMID: 26779235
Gao L, Yang H, Liu H, Yang J, Hu Y., Front Plant Sci 6(), 2015
PMID: 26779235
Ternary WD40 Repeat-Containing Protein Complexes: Evolution, Composition and Roles in Plant Immunity.
Miller JC, Chezem WR, Clay NK., Front Plant Sci 6(), 2015
PMID: 26779203
Miller JC, Chezem WR, Clay NK., Front Plant Sci 6(), 2015
PMID: 26779203
Transcriptional control of flavonoid biosynthesis by MYB-bHLH-WDR complexes.
Xu W, Dubos C, Lepiniec L., Trends Plant Sci 20(3), 2015
PMID: 25577424
Xu W, Dubos C, Lepiniec L., Trends Plant Sci 20(3), 2015
PMID: 25577424
Genome-wide identification and characterization of the bHLH gene family in tomato.
Sun H, Fan HJ, Ling HQ., BMC Genomics 16(), 2015
PMID: 25612924
Sun H, Fan HJ, Ling HQ., BMC Genomics 16(), 2015
PMID: 25612924
Direct detection of transcription factors in cotyledons during seedling development using sensitive silicon-substrate photonic crystal protein arrays.
Jones SI, Tan Y, Shamimuzzaman M, George S, Cunningham BT, Vodkin L., Plant Physiol 167(3), 2015
PMID: 25635113
Jones SI, Tan Y, Shamimuzzaman M, George S, Cunningham BT, Vodkin L., Plant Physiol 167(3), 2015
PMID: 25635113
A classification of basic helix-loop-helix transcription factors of soybean.
Hudson KA, Hudson ME., Int J Genomics 2015(), 2015
PMID: 25763382
Hudson KA, Hudson ME., Int J Genomics 2015(), 2015
PMID: 25763382
Genome-wide identification, classification and functional analyses of the bHLH transcription factor family in the pig, Sus scrofa.
Liu W., Mol Genet Genomics 290(4), 2015
PMID: 25687626
Liu W., Mol Genet Genomics 290(4), 2015
PMID: 25687626
Male sterility in Arabidopsis induced by overexpression of a MYC5-SRDX chimeric repressor.
Figueroa P, Browse J., Plant J 81(6), 2015
PMID: 25627909
Figueroa P, Browse J., Plant J 81(6), 2015
PMID: 25627909
Molecular characterization of the basic helix-loop-helix (bHLH) genes that are differentially expressed and induced by iron deficiency in Populus.
Huang D, Dai W., Plant Cell Rep 34(7), 2015
PMID: 25721202
Huang D, Dai W., Plant Cell Rep 34(7), 2015
PMID: 25721202
High-density genetic map construction and identification of a locus controlling weeping trait in an ornamental woody plant (Prunus mume Sieb. et Zucc).
Zhang J, Zhang Q, Cheng T, Yang W, Pan H, Zhong J, Huang L, Liu E., DNA Res 22(3), 2015
PMID: 25776277
Zhang J, Zhang Q, Cheng T, Yang W, Pan H, Zhong J, Huang L, Liu E., DNA Res 22(3), 2015
PMID: 25776277
Transcriptomic analyses reveal species-specific light-induced anthocyanin biosynthesis in chrysanthemum.
Hong Y, Tang X, Huang H, Zhang Y, Dai S., BMC Genomics 16(), 2015
PMID: 25887322
Hong Y, Tang X, Huang H, Zhang Y, Dai S., BMC Genomics 16(), 2015
PMID: 25887322
The bHLH transcription factor bHLH104 interacts with IAA-LEUCINE RESISTANT3 and modulates iron homeostasis in Arabidopsis.
Zhang J, Liu B, Li M, Feng D, Jin H, Wang P, Liu J, Xiong F, Wang J, Wang HB., Plant Cell 27(3), 2015
PMID: 25794933
Zhang J, Liu B, Li M, Feng D, Jin H, Wang P, Liu J, Xiong F, Wang J, Wang HB., Plant Cell 27(3), 2015
PMID: 25794933
Change of a conserved amino acid in the MYC2 and MYC3 transcription factors leads to release of JAZ repression and increased activity.
Goossens J, Swinnen G, Vanden Bossche R, Pauwels L, Goossens A., New Phytol 206(4), 2015
PMID: 25817565
Goossens J, Swinnen G, Vanden Bossche R, Pauwels L, Goossens A., New Phytol 206(4), 2015
PMID: 25817565
Sequencing, de novo assembly and comparative analysis of Raphanus sativus transcriptome.
Wu G, Zhang L, Yin Y, Wu J, Yu L, Zhou Y, Li M., Front Plant Sci 6(), 2015
PMID: 26029219
Wu G, Zhang L, Yin Y, Wu J, Yu L, Zhou Y, Li M., Front Plant Sci 6(), 2015
PMID: 26029219
Identification and Bioinformatics Analyses of the Basic Helix-loop-helix Transcription Factors in Xenopus laevis.
Liu W, Li F., Pak J Biol Sci 18(4), 2015
PMID: 26506645
Liu W, Li F., Pak J Biol Sci 18(4), 2015
PMID: 26506645
Integrated RNA-Seq and sRNA-Seq Analysis Identifies Chilling and Freezing Responsive Key Molecular Players and Pathways in Tea Plant (Camellia sinensis).
Zheng C, Zhao L, Wang Y, Shen J, Zhang Y, Jia S, Li Y, Ding Z., PLoS One 10(4), 2015
PMID: 25901577
Zheng C, Zhao L, Wang Y, Shen J, Zhang Y, Jia S, Li Y, Ding Z., PLoS One 10(4), 2015
PMID: 25901577
HEMERA Couples the Proteolysis and Transcriptional Activity of PHYTOCHROME INTERACTING FACTORs in Arabidopsis Photomorphogenesis.
Qiu Y, Li M, Pasoreck EK, Long L, Shi Y, Galvão RM, Chou CL, Wang H, Sun AY, Zhang YC, Jiang A, Chen M., Plant Cell 27(5), 2015
PMID: 25944101
Qiu Y, Li M, Pasoreck EK, Long L, Shi Y, Galvão RM, Chou CL, Wang H, Sun AY, Zhang YC, Jiang A, Chen M., Plant Cell 27(5), 2015
PMID: 25944101
Genetic mapping and comparative expression analysis of transcription factors in cotton.
Chen X, Jin X, Li X, Lin Z., PLoS One 10(5), 2015
PMID: 25946129
Chen X, Jin X, Li X, Lin Z., PLoS One 10(5), 2015
PMID: 25946129
The conserved transcription factors, MYB115 and MYB118, control expression of the newly evolved benzoyloxy glucosinolate pathway in Arabidopsis thaliana.
Zhang Y, Li B, Huai D, Zhou Y, Kliebenstein DJ., Front Plant Sci 6(), 2015
PMID: 26029237
Zhang Y, Li B, Huai D, Zhou Y, Kliebenstein DJ., Front Plant Sci 6(), 2015
PMID: 26029237
bHLH106 Integrates Functions of Multiple Genes through Their G-Box to Confer Salt Tolerance on Arabidopsis.
Ahmad A, Niwa Y, Goto S, Ogawa T, Shimizu M, Suzuki A, Kobayashi K, Kobayashi H., PLoS One 10(5), 2015
PMID: 25978450
Ahmad A, Niwa Y, Goto S, Ogawa T, Shimizu M, Suzuki A, Kobayashi K, Kobayashi H., PLoS One 10(5), 2015
PMID: 25978450
The Basic/Helix-Loop-Helix Protein Family in Gossypium: Reference Genes and Their Evolution during Tetraploidization.
Yan Q, Liu HS, Yao D, Li X, Chen H, Dou Y, Wang Y, Pei Y, Xiao YH., PLoS One 10(5), 2015
PMID: 25992947
Yan Q, Liu HS, Yao D, Li X, Chen H, Dou Y, Wang Y, Pei Y, Xiao YH., PLoS One 10(5), 2015
PMID: 25992947
Regulation of Jasmonate-Mediated Stamen Development and Seed Production by a bHLH-MYB Complex in Arabidopsis.
Qi T, Huang H, Song S, Xie D., Plant Cell 27(6), 2015
PMID: 26002869
Qi T, Huang H, Song S, Xie D., Plant Cell 27(6), 2015
PMID: 26002869
Regulation of Jasmonate-Induced Leaf Senescence by Antagonism between bHLH Subgroup IIIe and IIId Factors in Arabidopsis.
Qi T, Wang J, Huang H, Liu B, Gao H, Liu Y, Song S, Xie D., Plant Cell 27(6), 2015
PMID: 26071420
Qi T, Wang J, Huang H, Liu B, Gao H, Liu Y, Song S, Xie D., Plant Cell 27(6), 2015
PMID: 26071420
The bHLH transcription factor BIS1 controls the iridoid branch of the monoterpenoid indole alkaloid pathway in Catharanthus roseus.
Van Moerkercke A, Steensma P, Schweizer F, Pollier J, Gariboldi I, Payne R, Vanden Bossche R, Miettinen K, Espoz J, Purnama PC, Kellner F, Seppänen-Laakso T, O'Connor SE, Rischer H, Memelink J, Goossens A., Proc Natl Acad Sci U S A 112(26), 2015
PMID: 26080427
Van Moerkercke A, Steensma P, Schweizer F, Pollier J, Gariboldi I, Payne R, Vanden Bossche R, Miettinen K, Espoz J, Purnama PC, Kellner F, Seppänen-Laakso T, O'Connor SE, Rischer H, Memelink J, Goossens A., Proc Natl Acad Sci U S A 112(26), 2015
PMID: 26080427
Regulation of Carotenoid Biosynthesis by Shade Relies on Specific Subsets of Antagonistic Transcription Factors and Cofactors.
Bou-Torrent J, Toledo-Ortiz G, Ortiz-Alcaide M, Cifuentes-Esquivel N, Halliday KJ, Martinez-García JF, Rodriguez-Concepcion M., Plant Physiol 169(3), 2015
PMID: 26082398
Bou-Torrent J, Toledo-Ortiz G, Ortiz-Alcaide M, Cifuentes-Esquivel N, Halliday KJ, Martinez-García JF, Rodriguez-Concepcion M., Plant Physiol 169(3), 2015
PMID: 26082398
Genome-wide characterisation and analysis of bHLH transcription factors related to tanshinone biosynthesis in Salvia miltiorrhiza.
Zhang X, Luo H, Xu Z, Zhu Y, Ji A, Song J, Chen S., Sci Rep 5(), 2015
PMID: 26174967
Zhang X, Luo H, Xu Z, Zhu Y, Ji A, Song J, Chen S., Sci Rep 5(), 2015
PMID: 26174967
De novo sequencing and analysis of the cranberry fruit transcriptome to identify putative genes involved in flavonoid biosynthesis, transport and regulation.
Sun H, Liu Y, Gai Y, Geng J, Chen L, Liu H, Kang L, Tian Y, Li Y., BMC Genomics 16(), 2015
PMID: 26330221
Sun H, Liu Y, Gai Y, Geng J, Chen L, Liu H, Kang L, Tian Y, Li Y., BMC Genomics 16(), 2015
PMID: 26330221
Overexpression of EcbHLH57 Transcription Factor from Eleusine coracana L. in Tobacco Confers Tolerance to Salt, Oxidative and Drought Stress.
Babitha KC, Vemanna RS, Nataraja KN, Udayakumar M., PLoS One 10(9), 2015
PMID: 26366726
Babitha KC, Vemanna RS, Nataraja KN, Udayakumar M., PLoS One 10(9), 2015
PMID: 26366726
Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast.
Kelemen Z, Sebastian A, Xu W, Grain D, Salsac F, Avon A, Berger N, Tran J, Dubreucq B, Lurin C, Lepiniec L, Contreras-Moreira B, Dubos C., PLoS One 10(10), 2015
PMID: 26484765
Kelemen Z, Sebastian A, Xu W, Grain D, Salsac F, Avon A, Berger N, Tran J, Dubreucq B, Lurin C, Lepiniec L, Contreras-Moreira B, Dubos C., PLoS One 10(10), 2015
PMID: 26484765
GLABRA2 Directly Suppresses Basic Helix-Loop-Helix Transcription Factor Genes with Diverse Functions in Root Hair Development.
Lin Q, Ohashi Y, Kato M, Tsuge T, Gu H, Qu LJ, Aoyama T., Plant Cell 27(10), 2015
PMID: 26486447
Lin Q, Ohashi Y, Kato M, Tsuge T, Gu H, Qu LJ, Aoyama T., Plant Cell 27(10), 2015
PMID: 26486447
The plant-specific protein FEHLSTART controls male meiotic entry, initializing meiotic synchronization in Arabidopsis.
Li J, Dukowic-Schulze S, Lindquist IE, Farmer AD, Kelly B, Li T, Smith AG, Retzel EF, Mudge J, Chen C., Plant J 84(4), 2015
PMID: 26382719
Li J, Dukowic-Schulze S, Lindquist IE, Farmer AD, Kelly B, Li T, Smith AG, Retzel EF, Mudge J, Chen C., Plant J 84(4), 2015
PMID: 26382719
A Novel bHLH Transcription Factor Involved in Regulating Anthocyanin Biosynthesis in Chrysanthemums (Chrysanthemum morifolium Ramat.).
Xiang LL, Liu XF, Li X, Yin XR, Grierson D, Li F, Chen KS., PLoS One 10(11), 2015
PMID: 26619181
Xiang LL, Liu XF, Li X, Yin XR, Grierson D, Li F, Chen KS., PLoS One 10(11), 2015
PMID: 26619181
Transcriptomic Response to Nitric Oxide Treatment in Larix olgensis Henry.
Hu X, Yang J, Li C., Int J Mol Sci 16(12), 2015
PMID: 26633380
Hu X, Yang J, Li C., Int J Mol Sci 16(12), 2015
PMID: 26633380
A basic helix-loop-helix transcription factor, PhFBH4, regulates flower senescence by modulating ethylene biosynthesis pathway in petunia.
Yin J, Chang X, Kasuga T, Bui M, Reid MS, Jiang CZ., Hortic Res 2(), 2015
PMID: 26715989
Yin J, Chang X, Kasuga T, Bui M, Reid MS, Jiang CZ., Hortic Res 2(), 2015
PMID: 26715989
Genome-wide analysis of the bHLH transcription factor family in Chinese cabbage (Brassica rapa ssp. pekinensis).
Song XM, Huang ZN, Duan WK, Ren J, Liu TK, Li Y, Hou XL., Mol Genet Genomics 289(1), 2014
PMID: 24241166
Song XM, Huang ZN, Duan WK, Ren J, Liu TK, Li Y, Hou XL., Mol Genet Genomics 289(1), 2014
PMID: 24241166
bHLH122 is important for drought and osmotic stress resistance in Arabidopsis and in the repression of ABA catabolism.
Liu W, Tai H, Li S, Gao W, Zhao M, Xie C, Li WX., New Phytol 201(4), 2014
PMID: 24261563
Liu W, Tai H, Li S, Gao W, Zhao M, Xie C, Li WX., New Phytol 201(4), 2014
PMID: 24261563
Phytotoxicity effects and biological responses of Arabidopsis thaliana to 2,3,7,8-tetrachlorinated dibenzo-p-dioxin exposure.
Hanano A, Almousally I, Shaban M., Chemosphere 104(), 2014
PMID: 24275148
Hanano A, Almousally I, Shaban M., Chemosphere 104(), 2014
PMID: 24275148
Complexity and robustness of the flavonoid transcriptional regulatory network revealed by comprehensive analyses of MYB-bHLH-WDR complexes and their targets in Arabidopsis seed.
Xu W, Grain D, Bobet S, Le Gourrierec J, Thévenin J, Kelemen Z, Lepiniec L, Dubos C., New Phytol 202(1), 2014
PMID: 24299194
Xu W, Grain D, Bobet S, Le Gourrierec J, Thévenin J, Kelemen Z, Lepiniec L, Dubos C., New Phytol 202(1), 2014
PMID: 24299194
Both PHYTOCHROME RAPIDLY REGULATED1 (PAR1) and PAR2 promote seedling photomorphogenesis in multiple light signaling pathways.
Zhou P, Song M, Yang Q, Su L, Hou P, Guo L, Zheng X, Xi Y, Meng F, Xiao Y, Yang L, Yang J., Plant Physiol 164(2), 2014
PMID: 24335334
Zhou P, Song M, Yang Q, Su L, Hou P, Guo L, Zheng X, Xi Y, Meng F, Xiao Y, Yang L, Yang J., Plant Physiol 164(2), 2014
PMID: 24335334
Characterization of MxFIT, an iron deficiency induced transcriptional factor in Malus xiaojinensis.
Yin L, Wang Y, Yuan M, Zhang X, Xu X, Han Z., Plant Physiol Biochem 75(), 2014
PMID: 24389022
Yin L, Wang Y, Yuan M, Zhang X, Xu X, Han Z., Plant Physiol Biochem 75(), 2014
PMID: 24389022
Biosynthesis and metabolic engineering of anthocyanins in Arabidopsis thaliana.
Shi MZ, Xie DY., Recent Pat Biotechnol 8(1), 2014
PMID: 24354533
Shi MZ, Xie DY., Recent Pat Biotechnol 8(1), 2014
PMID: 24354533
Overexpression of AtbHLH112 suppresses lateral root emergence in Arabidopsis
Wang WS, Zhu J, Lu YT., Funct Plant Biol 41(4), 2014
PMID: IND500739488
Wang WS, Zhu J, Lu YT., Funct Plant Biol 41(4), 2014
PMID: IND500739488
Peace, a MYB-like transcription factor, regulates petal pigmentation in flowering peach 'Genpei' bearing variegated and fully pigmented flowers.
Uematsu C, Katayama H, Makino I, Inagaki A, Arakawa O, Martin C., J Exp Bot 65(4), 2014
PMID: 24453228
Uematsu C, Katayama H, Makino I, Inagaki A, Arakawa O, Martin C., J Exp Bot 65(4), 2014
PMID: 24453228
Dominant repression by Arabidopsis transcription factor MYB44 causes oxidative damage and hypersensitivity to abiotic stress.
Persak H, Pitzschke A., Int J Mol Sci 15(2), 2014
PMID: 24531138
Persak H, Pitzschke A., Int J Mol Sci 15(2), 2014
PMID: 24531138
In silico identification of transcription factors in Medicago sativa using available transcriptomic resources.
Postnikova OA, Shao J, Nemchinov LG., Mol Genet Genomics 289(3), 2014
PMID: 24556904
Postnikova OA, Shao J, Nemchinov LG., Mol Genet Genomics 289(3), 2014
PMID: 24556904
SORTING NEXIN1 is required for modulating the trafficking and stability of the Arabidopsis IRON-REGULATED TRANSPORTER1.
Ivanov R, Brumbarova T, Blum A, Jantke AM, Fink-Straube C, Bauer P., Plant Cell 26(3), 2014
PMID: 24596241
Ivanov R, Brumbarova T, Blum A, Jantke AM, Fink-Straube C, Bauer P., Plant Cell 26(3), 2014
PMID: 24596241
Soybean SAT1 (Symbiotic Ammonium Transporter 1) encodes a bHLH transcription factor involved in nodule growth and NH4+ transport.
Chiasson DM, Loughlin PC, Mazurkiewicz D, Mohammadidehcheshmeh M, Fedorova EE, Okamoto M, McLean E, Glass AD, Smith SE, Bisseling T, Tyerman SD, Day DA, Kaiser BN., Proc Natl Acad Sci U S A 111(13), 2014
PMID: 24707045
Chiasson DM, Loughlin PC, Mazurkiewicz D, Mohammadidehcheshmeh M, Fedorova EE, Okamoto M, McLean E, Glass AD, Smith SE, Bisseling T, Tyerman SD, Day DA, Kaiser BN., Proc Natl Acad Sci U S A 111(13), 2014
PMID: 24707045
Regulation of anthocyanin biosynthesis in peach fruits.
Rahim MA, Busatto N, Trainotti L., Planta 240(5), 2014
PMID: 24827911
Rahim MA, Busatto N, Trainotti L., Planta 240(5), 2014
PMID: 24827911
The grapevine basic helix-loop-helix (bHLH) transcription factor positively modulates CBF-pathway and confers tolerance to cold-stress in Arabidopsis.
Xu W, Zhang N, Jiao Y, Li R, Xiao D, Wang Z., Mol Biol Rep 41(8), 2014
PMID: 24859977
Xu W, Zhang N, Jiao Y, Li R, Xiao D, Wang Z., Mol Biol Rep 41(8), 2014
PMID: 24859977
Role of microRNAs in biotic and abiotic stress responses in crop plants.
Kumar R., Appl Biochem Biotechnol 174(1), 2014
PMID: 24869742
Kumar R., Appl Biochem Biotechnol 174(1), 2014
PMID: 24869742
An overview of the gene regulatory network controlling trichome development in the model plant, Arabidopsis.
Pattanaik S, Patra B, Singh SK, Yuan L., Front Plant Sci 5(), 2014
PMID: 25018756
Pattanaik S, Patra B, Singh SK, Yuan L., Front Plant Sci 5(), 2014
PMID: 25018756
Responses of a triple mutant defective in three iron deficiency-induced Basic Helix-Loop-Helix genes of the subgroup Ib(2) to iron deficiency and salicylic acid.
Maurer F, Naranjo Arcos MA, Bauer P., PLoS One 9(6), 2014
PMID: 24919188
Maurer F, Naranjo Arcos MA, Bauer P., PLoS One 9(6), 2014
PMID: 24919188
The American cranberry: first insights into the whole genome of a species adapted to bog habitat.
Polashock J, Zelzion E, Fajardo D, Zalapa J, Georgi L, Bhattacharya D, Vorsa N., BMC Plant Biol 14(), 2014
PMID: 24927653
Polashock J, Zelzion E, Fajardo D, Zalapa J, Georgi L, Bhattacharya D, Vorsa N., BMC Plant Biol 14(), 2014
PMID: 24927653
Evolution of fruit development genes in flowering plants.
Pabón-Mora N, Wong GK, Ambrose BA., Front Plant Sci 5(), 2014
PMID: 25018763
Pabón-Mora N, Wong GK, Ambrose BA., Front Plant Sci 5(), 2014
PMID: 25018763
Transcriptional control of floral anthocyanin pigmentation in monkeyflowers (Mimulus).
Yuan YW, Sagawa JM, Frost L, Vela JP, Bradshaw HD., New Phytol 204(4), 2014
PMID: 25103615
Yuan YW, Sagawa JM, Frost L, Vela JP, Bradshaw HD., New Phytol 204(4), 2014
PMID: 25103615
Class I TCP-DELLA interactions in inflorescence shoot apex determine plant height.
Davière JM, Wild M, Regnault T, Baumberger N, Eisler H, Genschik P, Achard P., Curr Biol 24(16), 2014
PMID: 25127215
Davière JM, Wild M, Regnault T, Baumberger N, Eisler H, Genschik P, Achard P., Curr Biol 24(16), 2014
PMID: 25127215
NLR-associating transcription factor bHLH84 and its paralogs function redundantly in plant immunity.
Xu F, Kapos P, Cheng YT, Li M, Zhang Y, Li X., PLoS Pathog 10(8), 2014
PMID: 25144198
Xu F, Kapos P, Cheng YT, Li M, Zhang Y, Li X., PLoS Pathog 10(8), 2014
PMID: 25144198
FBH1 affects warm temperature responses in the Arabidopsis circadian clock.
Nagel DH, Pruneda-Paz JL, Kay SA., Proc Natl Acad Sci U S A 111(40), 2014
PMID: 25246594
Nagel DH, Pruneda-Paz JL, Kay SA., Proc Natl Acad Sci U S A 111(40), 2014
PMID: 25246594
Transcriptome sequencing of rhizome tissue of Sinopodophyllum hexandrum at two temperatures.
Kumari A, Singh HR, Jha A, Swarnkar MK, Shankar R, Kumar S., BMC Genomics 15(), 2014
PMID: 25287271
Kumari A, Singh HR, Jha A, Swarnkar MK, Shankar R, Kumar S., BMC Genomics 15(), 2014
PMID: 25287271
Functional specialization of stomatal bHLHs through modification of DNA-binding and phosphoregulation potential.
Davies KA, Bergmann DC., Proc Natl Acad Sci U S A 111(43), 2014
PMID: 25304637
Davies KA, Bergmann DC., Proc Natl Acad Sci U S A 111(43), 2014
PMID: 25304637
Comparative transcriptomic analysis of male and female flowers of monoecious Quercus suber.
Rocheta M, Sobral R, Magalhães J, Amorim MI, Ribeiro T, Pinheiro M, Egas C, Morais-Cecílio L, Costa MM., Front Plant Sci 5(), 2014
PMID: 25414713
Rocheta M, Sobral R, Magalhães J, Amorim MI, Ribeiro T, Pinheiro M, Egas C, Morais-Cecílio L, Costa MM., Front Plant Sci 5(), 2014
PMID: 25414713
The regulation of anthocyanin synthesis in the wheat pericarp.
Shoeva OY, Gordeeva EI, Khlestkina EK., Molecules 19(12), 2014
PMID: 25486242
Shoeva OY, Gordeeva EI, Khlestkina EK., Molecules 19(12), 2014
PMID: 25486242
Stress-induced expression of the transcription factor RERJ1 is tightly regulated in response to jasmonic acid accumulation in rice.
Miyamoto K, Shimizu T, Mochizuki S, Nishizawa Y, Minami E, Nojiri H, Yamane H, Okada K., Protoplasma 250(1), 2013
PMID: 22456953
Miyamoto K, Shimizu T, Mochizuki S, Nishizawa Y, Minami E, Nojiri H, Yamane H, Okada K., Protoplasma 250(1), 2013
PMID: 22456953
Co-expression of AtbHLH17 and AtWRKY28 confers resistance to abiotic stress in Arabidopsis.
Babitha KC, Ramu SV, Pruthvi V, Mahesh P, Nataraja KN, Udayakumar M., Transgenic Res 22(2), 2013
PMID: 22948308
Babitha KC, Ramu SV, Pruthvi V, Mahesh P, Nataraja KN, Udayakumar M., Transgenic Res 22(2), 2013
PMID: 22948308
Modifications of a conserved regulatory network involving INDEHISCENT controls multiple aspects of reproductive tissue development in Arabidopsis.
Kay P, Groszmann M, Ross JJ, Parish RW, Swain SM., New Phytol 197(1), 2013
PMID: 23126654
Kay P, Groszmann M, Ross JJ, Parish RW, Swain SM., New Phytol 197(1), 2013
PMID: 23126654
Identification and characterization of MYB-bHLH-WD40 regulatory complexes controlling proanthocyanidin biosynthesis in strawberry (Fragaria × ananassa) fruits.
Schaart JG, Dubos C, Romero De La Fuente I, van Houwelingen AM, de Vos RC, Jonker HH, Xu W, Routaboul JM, Lepiniec L, Bovy AG., New Phytol 197(2), 2013
PMID: 23157553
Schaart JG, Dubos C, Romero De La Fuente I, van Houwelingen AM, de Vos RC, Jonker HH, Xu W, Routaboul JM, Lepiniec L, Bovy AG., New Phytol 197(2), 2013
PMID: 23157553
The R2R3-MYB, bHLH, WD40, and related transcription factors in flavonoid biosynthesis.
Zhao L, Gao L, Wang H, Chen X, Wang Y, Yang H, Wei C, Wan X, Xia T., Funct Integr Genomics 13(1), 2013
PMID: 23184474
Zhao L, Gao L, Wang H, Chen X, Wang Y, Yang H, Wei C, Wan X, Xia T., Funct Integr Genomics 13(1), 2013
PMID: 23184474
Identification and characterization of a homologue to the Arabidopsis INDEHISCENT gene in common Bean.
Gioia T, Logozzo G, Kami J, Spagnoletti Zeuli P, Gepts P., J Hered 104(2), 2013
PMID: 23235700
Gioia T, Logozzo G, Kami J, Spagnoletti Zeuli P, Gepts P., J Hered 104(2), 2013
PMID: 23235700
A survey of genes involved in Arachis stenosperma resistance to Meloidogyne arenaria race 1
Morgante CV, Brasileiro ACM, Roberts PA, Guimaraes LA, Araujo ACG, Fonseca LN, Leal-Bertioli SCM, Bertioli DJ, Guimaraes PM., Funct Plant Biol 40(12), 2013
PMID: IND500706237
Morgante CV, Brasileiro ACM, Roberts PA, Guimaraes LA, Araujo ACG, Fonseca LN, Leal-Bertioli SCM, Bertioli DJ, Guimaraes PM., Funct Plant Biol 40(12), 2013
PMID: IND500706237
The bHLH transcription factor SPATULA regulates root growth by controlling the size of the root meristem.
Makkena S, Lamb RS., BMC Plant Biol 13(), 2013
PMID: 23280064
Makkena S, Lamb RS., BMC Plant Biol 13(), 2013
PMID: 23280064
Control of plant trichome and root-hair development by a tomato (Solanum lycopersicum) R3 MYB transcription factor.
Tominaga-Wada R, Nukumizu Y, Sato S, Wada T., PLoS One 8(1), 2013
PMID: 23326563
Tominaga-Wada R, Nukumizu Y, Sato S, Wada T., PLoS One 8(1), 2013
PMID: 23326563
Targeted linkage map densification to improve cell wall related QTL detection and interpretation in maize.
Courtial A, Thomas J, Reymond M, Méchin V, Grima-Pettenati J, Barrière Y., Theor Appl Genet 126(5), 2013
PMID: 23358861
Courtial A, Thomas J, Reymond M, Méchin V, Grima-Pettenati J, Barrière Y., Theor Appl Genet 126(5), 2013
PMID: 23358861
Regulation of flavonoid biosynthesis involves an unexpected complex transcriptional regulation of TT8 expression, in Arabidopsis.
Xu W, Grain D, Le Gourrierec J, Harscoët E, Berger A, Jauvion V, Scagnelli A, Berger N, Bidzinski P, Kelemen Z, Salsac F, Baudry A, Routaboul JM, Lepiniec L, Dubos C., New Phytol 198(1), 2013
PMID: 23398515
Xu W, Grain D, Le Gourrierec J, Harscoët E, Berger A, Jauvion V, Scagnelli A, Berger N, Bidzinski P, Kelemen Z, Salsac F, Baudry A, Routaboul JM, Lepiniec L, Dubos C., New Phytol 198(1), 2013
PMID: 23398515
Ubiquitin protein ligase 3 mediates the proteasomal degradation of GLABROUS 3 and ENHANCER OF GLABROUS 3, regulators of trichome development and flavonoid biosynthesis in Arabidopsis.
Patra B, Pattanaik S, Yuan L., Plant J 74(3), 2013
PMID: 23373825
Patra B, Pattanaik S, Yuan L., Plant J 74(3), 2013
PMID: 23373825
NaMYC2 transcription factor regulates a subset of plant defense responses in Nicotiana attenuata.
Woldemariam MG, Dinh ST, Oh Y, Gaquerel E, Baldwin IT, Galis I., BMC Plant Biol 13(), 2013
PMID: 23634896
Woldemariam MG, Dinh ST, Oh Y, Gaquerel E, Baldwin IT, Galis I., BMC Plant Biol 13(), 2013
PMID: 23634896
Kinetics and functional diversity among the five members of the NADP-malic enzyme family from Zea mays, a C4 species.
Alvarez CE, Saigo M, Margarit E, Andreo CS, Drincovich MF., Photosynth Res 115(1), 2013
PMID: 23649167
Alvarez CE, Saigo M, Margarit E, Andreo CS, Drincovich MF., Photosynth Res 115(1), 2013
PMID: 23649167
Transcriptome profiling reveals differential transcript abundance in response to chilling stress in Populus simonii.
Song Y, Chen Q, Ci D, Zhang D., Plant Cell Rep 32(9), 2013
PMID: 23652820
Song Y, Chen Q, Ci D, Zhang D., Plant Cell Rep 32(9), 2013
PMID: 23652820
A bHLH-type transcription factor, ABA-INDUCIBLE BHLH-TYPE TRANSCRIPTION FACTOR/JA-ASSOCIATED MYC2-LIKE1, acts as a repressor to negatively regulate jasmonate signaling in arabidopsis.
Nakata M, Mitsuda N, Herde M, Koo AJ, Moreno JE, Suzuki K, Howe GA, Ohme-Takagi M., Plant Cell 25(5), 2013
PMID: 23673982
Nakata M, Mitsuda N, Herde M, Koo AJ, Moreno JE, Suzuki K, Howe GA, Ohme-Takagi M., Plant Cell 25(5), 2013
PMID: 23673982
Transcriptome analysis of Barbarea vulgaris infested with diamondback moth (Plutella xylostella) larvae.
Wei X, Zhang X, Shen D, Wang H, Wu Q, Lu P, Qiu Y, Song J, Zhang Y, Li X., PLoS One 8(5), 2013
PMID: 23696897
Wei X, Zhang X, Shen D, Wang H, Wu Q, Lu P, Qiu Y, Song J, Zhang Y, Li X., PLoS One 8(5), 2013
PMID: 23696897
Classification and evolutionary analysis of the basic helix-loop-helix gene family in the green anole lizard, Anolis carolinensis.
Liu A, Wang Y, Zhang D, Wang X, Song H, Dang C, Yao Q, Chen K., Mol Genet Genomics 288(7-8), 2013
PMID: 23756994
Liu A, Wang Y, Zhang D, Wang X, Song H, Dang C, Yao Q, Chen K., Mol Genet Genomics 288(7-8), 2013
PMID: 23756994
Analysis of expressed sequence tags (ESTs) from avocado seed (Persea americana var. drymifolia) reveals abundant expression of the gene encoding the antimicrobial peptide snakin.
Guzmán-Rodríguez JJ, Ibarra-Laclette E, Herrera-Estrella L, Ochoa-Zarzosa A, Suárez-Rodríguez LM, Rodríguez-Zapata LC, Salgado-Garciglia R, Jimenez-Moraila B, López-Meza JE, López-Gómez R., Plant Physiol Biochem 70(), 2013
PMID: 23811120
Guzmán-Rodríguez JJ, Ibarra-Laclette E, Herrera-Estrella L, Ochoa-Zarzosa A, Suárez-Rodríguez LM, Rodríguez-Zapata LC, Salgado-Garciglia R, Jimenez-Moraila B, López-Meza JE, López-Gómez R., Plant Physiol Biochem 70(), 2013
PMID: 23811120
Basic helix-loop-helix transcription factors JASMONATE-ASSOCIATED MYC2-LIKE1 (JAM1), JAM2, and JAM3 are negative regulators of jasmonate responses in Arabidopsis.
Sasaki-Sekimoto Y, Jikumaru Y, Obayashi T, Saito H, Masuda S, Kamiya Y, Ohta H, Shirasu K., Plant Physiol 163(1), 2013
PMID: 23852442
Sasaki-Sekimoto Y, Jikumaru Y, Obayashi T, Saito H, Masuda S, Kamiya Y, Ohta H, Shirasu K., Plant Physiol 163(1), 2013
PMID: 23852442
Plant flavonoids--biosynthesis, transport and involvement in stress responses.
Petrussa E, Braidot E, Zancani M, Peresson C, Bertolini A, Patui S, Vianello A., Int J Mol Sci 14(7), 2013
PMID: 23867610
Petrussa E, Braidot E, Zancani M, Peresson C, Bertolini A, Patui S, Vianello A., Int J Mol Sci 14(7), 2013
PMID: 23867610
The bHLH subgroup IIId factors negatively regulate jasmonate-mediated plant defense and development.
Song S, Qi T, Fan M, Zhang X, Gao H, Huang H, Wu D, Guo H, Xie D., PLoS Genet 9(7), 2013
PMID: 23935516
Song S, Qi T, Fan M, Zhang X, Gao H, Huang H, Wu D, Guo H, Xie D., PLoS Genet 9(7), 2013
PMID: 23935516
The bHLH proteins BEE and BIM positively modulate the shade avoidance syndrome in Arabidopsis seedlings.
Cifuentes-Esquivel N, Bou-Torrent J, Galstyan A, Gallemí M, Sessa G, Salla Martret M, Roig-Villanova I, Ruberti I, Martínez-García JF., Plant J 75(6), 2013
PMID: 23763263
Cifuentes-Esquivel N, Bou-Torrent J, Galstyan A, Gallemí M, Sessa G, Salla Martret M, Roig-Villanova I, Ruberti I, Martínez-García JF., Plant J 75(6), 2013
PMID: 23763263
Molecular characterization of cold-responsive basic helix-loop-helix transcription factors MabHLHs that interact with MaICE1 in banana fruit.
Peng HH, Shan W, Kuang JF, Lu WJ, Chen JY., Planta 238(5), 2013
PMID: 23955147
Peng HH, Shan W, Kuang JF, Lu WJ, Chen JY., Planta 238(5), 2013
PMID: 23955147
A nuclear calcium-sensing pathway is critical for gene regulation and salt stress tolerance in Arabidopsis.
Guan Q, Guan Q, Wu J, Yue X, Zhang Y, Zhu J., PLoS Genet 9(8), 2013
PMID: 24009530
Guan Q, Guan Q, Wu J, Yue X, Zhang Y, Zhu J., PLoS Genet 9(8), 2013
PMID: 24009530
Conservation of fruit dehiscence pathways between Lepidium campestre and Arabidopsis thaliana sheds light on the regulation of INDEHISCENT.
Lenser T, Theißen G., Plant J 76(4), 2013
PMID: 24004048
Lenser T, Theißen G., Plant J 76(4), 2013
PMID: 24004048
Phylogeny, functional annotation, and protein interaction network analyses of the Xenopus tropicalis basic helix-loop-helix transcription factors.
Liu W, Chen D., Biomed Res Int 2013(), 2013
PMID: 24312906
Liu W, Chen D., Biomed Res Int 2013(), 2013
PMID: 24312906
Evolution of the bHLH genes involved in stomatal development: implications for the expansion of developmental complexity of stomata in land plants.
Ran JH, Shen TT, Liu WJ, Wang XQ., PLoS One 8(11), 2013
PMID: 24244399
Ran JH, Shen TT, Liu WJ, Wang XQ., PLoS One 8(11), 2013
PMID: 24244399
De Novo transcriptome sequencing reveals important molecular networks and metabolic pathways of the plant, Chlorophytum borivilianum.
Kalra S, Puniya BL, Kulshreshtha D, Kumar S, Kaur J, Ramachandran S, Singh K., PLoS One 8(12), 2013
PMID: 24376689
Kalra S, Puniya BL, Kulshreshtha D, Kumar S, Kaur J, Ramachandran S, Singh K., PLoS One 8(12), 2013
PMID: 24376689
Signal transduction during cold, salt, and drought stresses in plants.
Huang GT, Ma SL, Bai LP, Zhang L, Ma H, Jia P, Liu J, Zhong M, Guo ZF., Mol Biol Rep 39(2), 2012
PMID: 21573796
Huang GT, Ma SL, Bai LP, Zhang L, Ma H, Jia P, Liu J, Zhong M, Guo ZF., Mol Biol Rep 39(2), 2012
PMID: 21573796
Fitting into the harsh reality: regulation of iron-deficiency responses in dicotyledonous plants.
Ivanov R, Brumbarova T, Bauer P., Mol Plant 5(1), 2012
PMID: 21873619
Ivanov R, Brumbarova T, Bauer P., Mol Plant 5(1), 2012
PMID: 21873619
Phylogenetic analysis and classification of the fungal bHLH domain.
Sailsbery JK, Atchley WR, Dean RA., Mol Biol Evol 29(5), 2012
PMID: 22114358
Sailsbery JK, Atchley WR, Dean RA., Mol Biol Evol 29(5), 2012
PMID: 22114358
The Arabidopsis JAZ2 promoter contains a G-Box and thymidine-rich module that are necessary and sufficient for jasmonate-dependent activation by MYC transcription factors and repression by JAZ proteins.
Figueroa P, Browse J., Plant Cell Physiol 53(2), 2012
PMID: 22173100
Figueroa P, Browse J., Plant Cell Physiol 53(2), 2012
PMID: 22173100
Functional specialization of the plant miR396 regulatory network through distinct microRNA-target interactions.
Debernardi JM, Rodriguez RE, Mecchia MA, Palatnik JF., PLoS Genet 8(1), 2012
PMID: 22242012
Debernardi JM, Rodriguez RE, Mecchia MA, Palatnik JF., PLoS Genet 8(1), 2012
PMID: 22242012
A gene regulatory network for root epidermis cell differentiation in Arabidopsis.
Bruex A, Kainkaryam RM, Wieckowski Y, Kang YH, Bernhardt C, Xia Y, Zheng X, Wang JY, Lee MM, Benfey P, Woolf PJ, Schiefelbein J., PLoS Genet 8(1), 2012
PMID: 22253603
Bruex A, Kainkaryam RM, Wieckowski Y, Kang YH, Bernhardt C, Xia Y, Zheng X, Wang JY, Lee MM, Benfey P, Woolf PJ, Schiefelbein J., PLoS Genet 8(1), 2012
PMID: 22253603
A single amino acid substitution in IIIf subfamily of basic helix-loop-helix transcription factor AtMYC1 leads to trichome and root hair patterning defects by abolishing its interaction with partner proteins in Arabidopsis.
Zhao H, Wang X, Zhu D, Cui S, Li X, Cao Y, Ma L., J Biol Chem 287(17), 2012
PMID: 22334670
Zhao H, Wang X, Zhu D, Cui S, Li X, Cao Y, Ma L., J Biol Chem 287(17), 2012
PMID: 22334670
Expression analysis of an R3-Type MYB transcription factor CPC-LIKE MYB4 (TRICHOMELESS2) and CPL4-Related transcripts in Arabidopsis.
Tominaga-Wada R, Nukumizu Y., Int J Mol Sci 13(3), 2012
PMID: 22489163
Tominaga-Wada R, Nukumizu Y., Int J Mol Sci 13(3), 2012
PMID: 22489163
A novel gene IBF1 is required for the inhibition of brown pigment deposition in rice hull furrows.
Shao T, Qian Q, Tang D, Chen J, Li M, Cheng Z, Luo Q., Theor Appl Genet 125(2), 2012
PMID: 22419106
Shao T, Qian Q, Tang D, Chen J, Li M, Cheng Z, Luo Q., Theor Appl Genet 125(2), 2012
PMID: 22419106
Retrotransposons control fruit-specific, cold-dependent accumulation of anthocyanins in blood oranges.
Butelli E, Licciardello C, Zhang Y, Liu J, Mackay S, Bailey P, Reforgiato-Recupero G, Martin C., Plant Cell 24(3), 2012
PMID: 22427337
Butelli E, Licciardello C, Zhang Y, Liu J, Mackay S, Bailey P, Reforgiato-Recupero G, Martin C., Plant Cell 24(3), 2012
PMID: 22427337
De novo sequencing and characterization of Picrorhiza kurrooa transcriptome at two temperatures showed major transcriptome adjustments.
Gahlan P, Singh HR, Shankar R, Sharma N, Kumari A, Chawla V, Ahuja PS, Kumar S., BMC Genomics 13(), 2012
PMID: 22462805
Gahlan P, Singh HR, Shankar R, Sharma N, Kumari A, Chawla V, Ahuja PS, Kumar S., BMC Genomics 13(), 2012
PMID: 22462805
The bHLH protein ROX acts in concert with RAX1 and LAS to modulate axillary meristem formation in Arabidopsis.
Yang F, Wang Q, Schmitz G, Müller D, Theres K., Plant J 71(1), 2012
PMID: 22372440
Yang F, Wang Q, Schmitz G, Müller D, Theres K., Plant J 71(1), 2012
PMID: 22372440
Comparison of MdMYB1 sequences and expression of anthocyanin biosynthetic and regulatory genes between Malus domestica Borkh. cultivar ‘Ralls’ and its blushed sport
Xu Y, Feng S, Jiao Q, Liu C, Zhang W, Chen W, Chen X., Euphytica 185(2), 2012
PMID: IND44739806
Xu Y, Feng S, Jiao Q, Liu C, Zhang W, Chen W, Chen X., Euphytica 185(2), 2012
PMID: IND44739806
Identification and in silico characterization of soybean trihelix-GT and bHLH transcription factors involved in stress responses.
Osorio MB, Bücker-Neto L, Castilhos G, Turchetto-Zolet AC, Wiebke-Strohm B, Bodanese-Zanettini MH, Margis-Pinheiro M., Genet Mol Biol 35(1 (suppl)), 2012
PMID: 22802709
Osorio MB, Bücker-Neto L, Castilhos G, Turchetto-Zolet AC, Wiebke-Strohm B, Bodanese-Zanettini MH, Margis-Pinheiro M., Genet Mol Biol 35(1 (suppl)), 2012
PMID: 22802709
Mechanisms of stomatal development: an evolutionary view.
Vatén A, Bergmann DC., Evodevo 3(1), 2012
PMID: 22691547
Vatén A, Bergmann DC., Evodevo 3(1), 2012
PMID: 22691547
Regulatory switch enforced by basic helix-loop-helix and ACT-domain mediated dimerizations of the maize transcription factor R.
Kong Q, Pattanaik S, Feller A, Werkman JR, Chai C, Wang Y, Grotewold E, Yuan L., Proc Natl Acad Sci U S A 109(30), 2012
PMID: 22778424
Kong Q, Pattanaik S, Feller A, Werkman JR, Chai C, Wang Y, Grotewold E, Yuan L., Proc Natl Acad Sci U S A 109(30), 2012
PMID: 22778424
Accurate discrimination of bHLH domains in plants, animals, and fungi using biologically meaningful sites.
Sailsbery JK, Dean RA., BMC Evol Biol 12(), 2012
PMID: 22920570
Sailsbery JK, Dean RA., BMC Evol Biol 12(), 2012
PMID: 22920570
Arabidopsis mutant sk156 reveals complex regulation of SPL15 in a miR156-controlled gene network.
Wei S, Gruber MY, Yu B, Gao MJ, Khachatourians GG, Hegedus DD, Parkin IA, Hannoufa A., BMC Plant Biol 12(), 2012
PMID: 22989211
Wei S, Gruber MY, Yu B, Gao MJ, Khachatourians GG, Hegedus DD, Parkin IA, Hannoufa A., BMC Plant Biol 12(), 2012
PMID: 22989211
Early gene expression events in the laminar abscission zone of abscission-promoted citrus leaves after a cycle of water stress/rehydration: involvement of CitbHLH1.
Agustí J, Gimeno J, Merelo P, Serrano R, Cercós M, Conesa A, Talón M, Tadeo FR., J Exp Bot 63(17), 2012
PMID: 23028022
Agustí J, Gimeno J, Merelo P, Serrano R, Cercós M, Conesa A, Talón M, Tadeo FR., J Exp Bot 63(17), 2012
PMID: 23028022
Basic helix-loop-helix transcription factors and epidermal cell fate determination in Arabidopsis.
Zhao H, Li X, Ma L., Plant Signal Behav 7(12), 2012
PMID: 23073001
Zhao H, Li X, Ma L., Plant Signal Behav 7(12), 2012
PMID: 23073001
A triantagonistic basic helix-loop-helix system regulates cell elongation in Arabidopsis.
Ikeda M, Fujiwara S, Mitsuda N, Ohme-Takagi M., Plant Cell 24(11), 2012
PMID: 23161888
Ikeda M, Fujiwara S, Mitsuda N, Ohme-Takagi M., Plant Cell 24(11), 2012
PMID: 23161888
PIFs: pivotal components in a cellular signaling hub.
Leivar P, Quail PH., Trends Plant Sci 16(1), 2011
PMID: 20833098
Leivar P, Quail PH., Trends Plant Sci 16(1), 2011
PMID: 20833098
Reducing PEX13 expression ameliorates physiological defects of late-acting peroxin mutants.
Ratzel SE, Lingard MJ, Woodward AW, Bartel B., Traffic 12(1), 2011
PMID: 20969679
Ratzel SE, Lingard MJ, Woodward AW, Bartel B., Traffic 12(1), 2011
PMID: 20969679
The Arabidopsis bHLH25 and bHLH27 transcription factors contribute to susceptibility to the cyst nematode Heterodera schachtii.
Jin J, Hewezi T, Baum TJ., Plant J 65(2), 2011
PMID: 21223395
Jin J, Hewezi T, Baum TJ., Plant J 65(2), 2011
PMID: 21223395
Transcription profile analysis reveals that zygotic division results in uneven distribution of specific transcripts in apical/basal cells of tobacco.
Ma L, Xin H, Qu L, Zhao J, Yang L, Zhao P, Sun M., PLoS One 6(1), 2011
PMID: 21249132
Ma L, Xin H, Qu L, Zhao J, Yang L, Zhao P, Sun M., PLoS One 6(1), 2011
PMID: 21249132
The study of a SPATULA-like bHLH transcription factor expressed during peach (Prunus persica) fruit development.
Tani E, Tsaballa A, Stedel C, Kalloniati C, Papaefthimiou D, Polidoros A, Darzentas N, Ganopoulos I, Flemetakis E, Katinakis P, Tsaftaris A., Plant Physiol Biochem 49(6), 2011
PMID: 21324706
Tani E, Tsaballa A, Stedel C, Kalloniati C, Papaefthimiou D, Polidoros A, Darzentas N, Ganopoulos I, Flemetakis E, Katinakis P, Tsaftaris A., Plant Physiol Biochem 49(6), 2011
PMID: 21324706
Recent advances in the transcriptional regulation of the flavonoid biosynthetic pathway.
Hichri I, Barrieu F, Bogs J, Kappel C, Delrot S, Lauvergeat V., J Exp Bot 62(8), 2011
PMID: 21278228
Hichri I, Barrieu F, Bogs J, Kappel C, Delrot S, Lauvergeat V., J Exp Bot 62(8), 2011
PMID: 21278228
Characterization of JAZ-interacting bHLH transcription factors that regulate jasmonate responses in Arabidopsis.
Niu Y, Figueroa P, Browse J., J Exp Bot 62(6), 2011
PMID: 21321051
Niu Y, Figueroa P, Browse J., J Exp Bot 62(6), 2011
PMID: 21321051
The shade avoidance syndrome in Arabidopsis: a fundamental role for atypical basic helix-loop-helix proteins as transcriptional cofactors.
Galstyan A, Cifuentes-Esquivel N, Bou-Torrent J, Martinez-Garcia JF., Plant J 66(2), 2011
PMID: 21205034
Galstyan A, Cifuentes-Esquivel N, Bou-Torrent J, Martinez-Garcia JF., Plant J 66(2), 2011
PMID: 21205034
Sequence and function of basic helix-loop-helix proteins required for stomatal development in Arabidopsis are deeply conserved in land plants.
MacAlister CA, Bergmann DC., Evol Dev 13(2), 2011
PMID: 21410874
MacAlister CA, Bergmann DC., Evol Dev 13(2), 2011
PMID: 21410874
Uncharacterized conserved motifs outside the HD-Zip domain in HD-Zip subfamily I transcription factors; a potential source of functional diversity.
Arce AL, Raineri J, Capella M, Cabello JV, Chan RL., BMC Plant Biol 11(), 2011
PMID: 21371298
Arce AL, Raineri J, Capella M, Cabello JV, Chan RL., BMC Plant Biol 11(), 2011
PMID: 21371298
ABA-mediated transcriptional regulation in response to osmotic stress in plants.
Fujita Y, Fujita M, Shinozaki K, Yamaguchi-Shinozaki K., J Plant Res 124(4), 2011
PMID: 21416314
Fujita Y, Fujita M, Shinozaki K, Yamaguchi-Shinozaki K., J Plant Res 124(4), 2011
PMID: 21416314
Evolutionary and comparative analysis of MYB and bHLH plant transcription factors.
Feller A, Machemer K, Braun EL, Grotewold E., Plant J 66(1), 2011
PMID: 21443626
Feller A, Machemer K, Braun EL, Grotewold E., Plant J 66(1), 2011
PMID: 21443626
Flavonoid-related basic helix-loop-helix regulators, NtAn1a and NtAn1b, of tobacco have originated from two ancestors and are functionally active.
Bai Y, Pattanaik S, Patra B, Werkman JR, Xie CH, Yuan L., Planta 234(2), 2011
PMID: 21484270
Bai Y, Pattanaik S, Patra B, Werkman JR, Xie CH, Yuan L., Planta 234(2), 2011
PMID: 21484270
MYC genes with differential responses to tapping, mechanical wounding, ethrel and methyl jasmonate in laticifers of rubber tree (Hevea brasiliensis Muell. Arg.).
Zhao Y, Zhou LM, Chen YY, Yang SG, Tian WM., J Plant Physiol 168(14), 2011
PMID: 21489651
Zhao Y, Zhou LM, Chen YY, Yang SG, Tian WM., J Plant Physiol 168(14), 2011
PMID: 21489651
TRANSPARENT TESTA1 interacts with R2R3-MYB factors and affects early and late steps of flavonoid biosynthesis in the endothelium of Arabidopsis thaliana seeds.
Appelhagen I, Lu GH, Huep G, Schmelzer E, Weisshaar B, Sagasser M., Plant J 67(3), 2011
PMID: 21477081
Appelhagen I, Lu GH, Huep G, Schmelzer E, Weisshaar B, Sagasser M., Plant J 67(3), 2011
PMID: 21477081
Interaction between the bHLH transcription factor FIT and ETHYLENE INSENSITIVE3/ETHYLENE INSENSITIVE3-LIKE1 reveals molecular linkage between the regulation of iron acquisition and ethylene signaling in Arabidopsis.
Lingam S, Mohrbacher J, Brumbarova T, Potuschak T, Fink-Straube C, Blondet E, Genschik P, Bauer P., Plant Cell 23(5), 2011
PMID: 21586684
Lingam S, Mohrbacher J, Brumbarova T, Potuschak T, Fink-Straube C, Blondet E, Genschik P, Bauer P., Plant Cell 23(5), 2011
PMID: 21586684
Apple skin patterning is associated with differential expression of MYB10.
Telias A, Lin-Wang K, Stevenson DE, Cooney JM, Hellens RP, Allan AC, Hoover EE, Bradeen JM., BMC Plant Biol 11(), 2011
PMID: 21599973
Telias A, Lin-Wang K, Stevenson DE, Cooney JM, Hellens RP, Allan AC, Hoover EE, Bradeen JM., BMC Plant Biol 11(), 2011
PMID: 21599973
Natural allelic variation defines a role for ATMYC1: trichome cell fate determination.
Symonds VV, Hatlestad G, Lloyd AM., PLoS Genet 7(6), 2011
PMID: 21695236
Symonds VV, Hatlestad G, Lloyd AM., PLoS Genet 7(6), 2011
PMID: 21695236
Leucoanthocyanidin Dioxygenase in Arabidopsis thaliana: characterization of mutant alleles and regulation by MYB-BHLH-TTG1 transcription factor complexes.
Appelhagen I, Jahns O, Bartelniewoehner L, Sagasser M, Weisshaar B, Stracke R., Gene 484(1-2), 2011
PMID: 21683773
Appelhagen I, Jahns O, Bartelniewoehner L, Sagasser M, Weisshaar B, Stracke R., Gene 484(1-2), 2011
PMID: 21683773
MtbHLH1, a bHLH transcription factor involved in Medicago truncatula nodule vascular patterning and nodule to plant metabolic exchanges.
Godiard L, Lepage A, Moreau S, Laporte D, Verdenaud M, Timmers T, Gamas P., New Phytol 191(2), 2011
PMID: 21679315
Godiard L, Lepage A, Moreau S, Laporte D, Verdenaud M, Timmers T, Gamas P., New Phytol 191(2), 2011
PMID: 21679315
Phytochrome signaling mechanisms.
Li J, Li G, Wang H, Wang Deng X., Arabidopsis Book 9(), 2011
PMID: 22303272
Li J, Li G, Wang H, Wang Deng X., Arabidopsis Book 9(), 2011
PMID: 22303272
SPATULA and ALCATRAZ, are partially redundant, functionally diverging bHLH genes required for Arabidopsis gynoecium and fruit development.
Groszmann M, Paicu T, Alvarez JP, Swain SM, Smyth DR., Plant J 68(5), 2011
PMID: 21801252
Groszmann M, Paicu T, Alvarez JP, Swain SM, Smyth DR., Plant J 68(5), 2011
PMID: 21801252
The JAZ proteins: a crucial interface in the jasmonate signaling cascade.
Pauwels L, Goossens A., Plant Cell 23(9), 2011
PMID: 21963667
Pauwels L, Goossens A., Plant Cell 23(9), 2011
PMID: 21963667
Posttranslational regulation of the iron deficiency basic helix-loop-helix transcription factor FIT is affected by iron and nitric oxide.
Meiser J, Lingam S, Bauer P., Plant Physiol 157(4), 2011
PMID: 21972265
Meiser J, Lingam S, Bauer P., Plant Physiol 157(4), 2011
PMID: 21972265
INDEHISCENT and SPATULA interact to specify carpel and valve margin tissue and thus promote seed dispersal in Arabidopsis.
Girin T, Paicu T, Stephenson P, Fuentes S, Körner E, O'Brien M, Sorefan K, Wood TA, Balanzá V, Ferrándiz C, Smyth DR, Østergaard L., Plant Cell 23(10), 2011
PMID: 21990939
Girin T, Paicu T, Stephenson P, Fuentes S, Körner E, O'Brien M, Sorefan K, Wood TA, Balanzá V, Ferrándiz C, Smyth DR, Østergaard L., Plant Cell 23(10), 2011
PMID: 21990939
Biochemical and molecular analysis of pink tomatoes: deregulated expression of the gene encoding transcription factor SlMYB12 leads to pink tomato fruit color.
Ballester AR, Molthoff J, de Vos R, Hekkert Bt, Orzaez D, Fernández-Moreno JP, Tripodi P, Grandillo S, Martin C, Heldens J, Ykema M, Granell A, Bovy A., Plant Physiol 152(1), 2010
PMID: 19906891
Ballester AR, Molthoff J, de Vos R, Hekkert Bt, Orzaez D, Fernández-Moreno JP, Tripodi P, Grandillo S, Martin C, Heldens J, Ykema M, Granell A, Bovy A., Plant Physiol 152(1), 2010
PMID: 19906891
Origin and diversification of basic-helix-loop-helix proteins in plants.
Pires N, Dolan L., Mol Biol Evol 27(4), 2010
PMID: 19942615
Pires N, Dolan L., Mol Biol Evol 27(4), 2010
PMID: 19942615
A new family of ferritin genes from Lupinus luteus--comparative analysis of plant ferritins, their gene structure, and evolution.
Strozycki PM, Szymanski M, Szczurek A, Barciszewski J, Figlerowicz M., Mol Biol Evol 27(1), 2010
PMID: 19726535
Strozycki PM, Szymanski M, Szczurek A, Barciszewski J, Figlerowicz M., Mol Biol Evol 27(1), 2010
PMID: 19726535
Isolation of WDR and bHLH genes related to flavonoid synthesis in grapevine (Vitis vinifera L.).
Matus JT, Poupin MJ, Cañón P, Bordeu E, Alcalde JA, Arce-Johnson P., Plant Mol Biol 72(6), 2010
PMID: 20112051
Matus JT, Poupin MJ, Cañón P, Bordeu E, Alcalde JA, Arce-Johnson P., Plant Mol Biol 72(6), 2010
PMID: 20112051
The ABORTED MICROSPORES regulatory network is required for postmeiotic male reproductive development in Arabidopsis thaliana.
Xu J, Yang C, Yuan Z, Zhang D, Gondwe MY, Ding Z, Liang W, Zhang D, Wilson ZA., Plant Cell 22(1), 2010
PMID: 20118226
Xu J, Yang C, Yuan Z, Zhang D, Gondwe MY, Ding Z, Liang W, Zhang D, Wilson ZA., Plant Cell 22(1), 2010
PMID: 20118226
Nitrate-responsive miR393/AFB3 regulatory module controls root system architecture in Arabidopsis thaliana.
Vidal EA, Araus V, Lu C, Parry G, Green PJ, Coruzzi GM, Gutiérrez RA., Proc Natl Acad Sci U S A 107(9), 2010
PMID: 20142497
Vidal EA, Araus V, Lu C, Parry G, Green PJ, Coruzzi GM, Gutiérrez RA., Proc Natl Acad Sci U S A 107(9), 2010
PMID: 20142497
Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
Skinner MK, Rawls A, Wilson-Rawls J, Roalson EH., Differentiation 80(1), 2010
PMID: 20219281
Skinner MK, Rawls A, Wilson-Rawls J, Roalson EH., Differentiation 80(1), 2010
PMID: 20219281
The Arabidopsis floral homeotic proteins APETALA3 and PISTILLATA negatively regulate the BANQUO genes implicated in light signaling.
Mara CD, Huang T, Irish VF., Plant Cell 22(3), 2010
PMID: 20305124
Mara CD, Huang T, Irish VF., Plant Cell 22(3), 2010
PMID: 20305124
Identification of specific DNA binding residues in the TCP family of transcription factors in Arabidopsis.
Aggarwal P, Das Gupta M, Joseph AP, Chatterjee N, Srinivasan N, Nath U., Plant Cell 22(4), 2010
PMID: 20363772
Aggarwal P, Das Gupta M, Joseph AP, Chatterjee N, Srinivasan N, Nath U., Plant Cell 22(4), 2010
PMID: 20363772
Genome-wide classification and evolutionary analysis of the bHLH family of transcription factors in Arabidopsis, poplar, rice, moss, and algae.
Carretero-Paulet L, Galstyan A, Roig-Villanova I, Martínez-García JF, Bilbao-Castro JR, Robertson DL., Plant Physiol 153(3), 2010
PMID: 20472752
Carretero-Paulet L, Galstyan A, Roig-Villanova I, Martínez-García JF, Bilbao-Castro JR, Robertson DL., Plant Physiol 153(3), 2010
PMID: 20472752
Multiple bHLH proteins regulate CIT2 expression in Saccharomyces cerevisiae.
Chen L, Lopes JM., Yeast 27(6), 2010
PMID: 20162531
Chen L, Lopes JM., Yeast 27(6), 2010
PMID: 20162531
Overexpression of a homopeptide repeat-containing bHLH protein gene (OrbHLH001) from Dongxiang Wild Rice confers freezing and salt tolerance in transgenic Arabidopsis.
Li F, Guo S, Zhao Y, Chen D, Chong K, Xu Y., Plant Cell Rep 29(9), 2010
PMID: 20559833
Li F, Guo S, Zhao Y, Chen D, Chong K, Xu Y., Plant Cell Rep 29(9), 2010
PMID: 20559833
MYB transcription factors in Arabidopsis.
Dubos C, Stracke R, Grotewold E, Weisshaar B, Martin C, Lepiniec L., Trends Plant Sci 15(10), 2010
PMID: 20674465
Dubos C, Stracke R, Grotewold E, Weisshaar B, Martin C, Lepiniec L., Trends Plant Sci 15(10), 2010
PMID: 20674465
The bHLH transcription factor POPEYE regulates response to iron deficiency in Arabidopsis roots.
Long TA, Tsukagoshi H, Busch W, Lahner B, Salt DE, Benfey PN., Plant Cell 22(7), 2010
PMID: 20675571
Long TA, Tsukagoshi H, Busch W, Lahner B, Salt DE, Benfey PN., Plant Cell 22(7), 2010
PMID: 20675571
Gibberellins control fruit patterning in Arabidopsis thaliana.
Arnaud N, Girin T, Sorefan K, Fuentes S, Wood TA, Lawrenson T, Sablowski R, Østergaard L., Genes Dev 24(19), 2010
PMID: 20889713
Arnaud N, Girin T, Sorefan K, Fuentes S, Wood TA, Lawrenson T, Sablowski R, Østergaard L., Genes Dev 24(19), 2010
PMID: 20889713
Derepression of INO1 transcription requires cooperation between the Ino2p-Ino4p heterodimer and Cbf1p and recruitment of the ISW2 chromatin-remodeling complex.
Shetty A, Lopes JM., Eukaryot Cell 9(12), 2010
PMID: 20935143
Shetty A, Lopes JM., Eukaryot Cell 9(12), 2010
PMID: 20935143
Three non-autonomous signals collaborate for nuclear targeting of CrMYC2, a Catharanthus roseus bHLH transcription factor.
Hedhili S, De Mattei MV, Coudert Y, Bourrié I, Bigot Y, Gantet P., BMC Res Notes 3(), 2010
PMID: 21073696
Hedhili S, De Mattei MV, Coudert Y, Bourrié I, Bigot Y, Gantet P., BMC Res Notes 3(), 2010
PMID: 21073696
A new dominant Arabidopsis transparent testa mutant, sk21-D, and modulation of seed flavonoid biosynthesis by KAN4.
Gao P, Li X, Cui D, Wu L, Parkin I, Gruber MY., Plant Biotechnol J 8(9), 2010
PMID: 20444210
Gao P, Li X, Cui D, Wu L, Parkin I, Gruber MY., Plant Biotechnol J 8(9), 2010
PMID: 20444210
Identification of ICE2, a gene involved in cold acclimation which determines freezing tolerance in Arabidopsis thaliana.
Fursova OV, Pogorelko GV, Tarasov VA., Gene 429(1-2), 2009
PMID: 19026725
Fursova OV, Pogorelko GV, Tarasov VA., Gene 429(1-2), 2009
PMID: 19026725
Don't 'leaf' now. The making of a fruit.
Østergaard L., Curr Opin Plant Biol 12(1), 2009
PMID: 19013099
Østergaard L., Curr Opin Plant Biol 12(1), 2009
PMID: 19013099
Altered trans-regulatory control of gene expression in multiple anthocyanin genes contributes to adaptive flower color evolution in Mimulus aurantiacus.
Streisfeld MA, Rausher MD., Mol Biol Evol 26(2), 2009
PMID: 19029190
Streisfeld MA, Rausher MD., Mol Biol Evol 26(2), 2009
PMID: 19029190
A segment containing a G-box and an ACGT motif confers differential expression characteristics and responses to the Arabidopsis Cytc-2 gene, encoding an isoform of cytochrome c.
Welchen E, Viola IL, Kim HJ, Prendes LP, Comelli RN, Hong JC, Gonzalez DH., J Exp Bot 60(3), 2009
PMID: 19098132
Welchen E, Viola IL, Kim HJ, Prendes LP, Comelli RN, Hong JC, Gonzalez DH., J Exp Bot 60(3), 2009
PMID: 19098132
Characterization of promoter elements required for expression and induction by sucrose of the Arabidopsis COX5b-1 nuclear gene, encoding the zinc-binding subunit of cytochrome c oxidase.
Comelli RN, Viola IL, Gonzalez DH., Plant Mol Biol 69(6), 2009
PMID: 19125337
Comelli RN, Viola IL, Gonzalez DH., Plant Mol Biol 69(6), 2009
PMID: 19125337
Multiple repeats of a promoter segment causes transcription factor autoregulation in red apples.
Espley RV, Brendolise C, Chagné D, Kutty-Amma S, Green S, Volz R, Putterill J, Schouten HJ, Gardiner SE, Hellens RP, Allan AC., Plant Cell 21(1), 2009
PMID: 19151225
Espley RV, Brendolise C, Chagné D, Kutty-Amma S, Green S, Volz R, Putterill J, Schouten HJ, Gardiner SE, Hellens RP, Allan AC., Plant Cell 21(1), 2009
PMID: 19151225
Submergence-inducible and circadian rhythmic basic helix-loop-helix protein gene in Nicotiana tabacum.
Ko DK, Lee MO, Hahn JS, Kim BG, Hong CB., J Plant Physiol 166(10), 2009
PMID: 19215997
Ko DK, Lee MO, Hahn JS, Kim BG, Hong CB., J Plant Physiol 166(10), 2009
PMID: 19215997
A systems approach reveals regulatory circuitry for Arabidopsis trichome initiation by the GL3 and GL1 selectors.
Morohashi K, Grotewold E., PLoS Genet 5(2), 2009
PMID: 19247443
Morohashi K, Grotewold E., PLoS Genet 5(2), 2009
PMID: 19247443
Impact of environmental and genetic factors on expression of maize gene classes: Relevance to grain composition
Harrigan GeorgeG, Stork LeAnnaG, Riordan SusanG, Reynolds TraceyL, Taylor JPhilip, Masucci JamesD, Cao Yongwei, LeDeaux JohnR, Pandravada Anand, Glenn KevinC., J Food Compost Anal 22(2), 2009
PMID: IND44188767
Harrigan GeorgeG, Stork LeAnnaG, Riordan SusanG, Reynolds TraceyL, Taylor JPhilip, Masucci JamesD, Cao Yongwei, LeDeaux JohnR, Pandravada Anand, Glenn KevinC., J Food Compost Anal 22(2), 2009
PMID: IND44188767
Genomic expression profiling of mature soybean (Glycine max) pollen.
Haerizadeh F, Wong CE, Bhalla PL, Gresshoff PM, Singh MB., BMC Plant Biol 9(), 2009
PMID: 19265555
Haerizadeh F, Wong CE, Bhalla PL, Gresshoff PM, Singh MB., BMC Plant Biol 9(), 2009
PMID: 19265555
FORMOSA controls cell division and expansion during floral development in Antirrhinum majus.
Delgado-Benarroch L, Causier B, Weiss J, Egea-Cortines M., Planta 229(6), 2009
PMID: 19271234
Delgado-Benarroch L, Causier B, Weiss J, Egea-Cortines M., Planta 229(6), 2009
PMID: 19271234
Plant oxylipins: COI1/JAZs/MYC2 as the core jasmonic acid-signalling module.
Chini A, Boter M, Solano R., FEBS J 276(17), 2009
PMID: 19663905
Chini A, Boter M, Solano R., FEBS J 276(17), 2009
PMID: 19663905
Conservation of lotus and Arabidopsis basic helix-loop-helix proteins reveals new players in root hair development.
Karas B, Amyot L, Johansen C, Sato S, Tabata S, Kawaguchi M, Szczyglowski K., Plant Physiol 151(3), 2009
PMID: 19675148
Karas B, Amyot L, Johansen C, Sato S, Tabata S, Kawaguchi M, Szczyglowski K., Plant Physiol 151(3), 2009
PMID: 19675148
Identification of regulatory elements involved in expression and induction by sucrose and UV-B light of the Arabidopsis thaliana COX5b-2 gene, encoding an isoform of cytochrome c oxidase subunit 5b.
Comelli RN, Gonzalez DH., Physiol Plant 137(3), 2009
PMID: 19781003
Comelli RN, Gonzalez DH., Physiol Plant 137(3), 2009
PMID: 19781003
Top hits in contemporary JAZ: an update on jasmonate signaling.
Chung HS, Niu Y, Browse J, Howe GA., Phytochemistry 70(13-14), 2009
PMID: 19800644
Chung HS, Niu Y, Browse J, Howe GA., Phytochemistry 70(13-14), 2009
PMID: 19800644
Transcriptional regulation of anthocyanin biosynthesis in red cabbage.
Yuan Y, Chiu LW, Li L., Planta 230(6), 2009
PMID: 19756724
Yuan Y, Chiu LW, Li L., Planta 230(6), 2009
PMID: 19756724
Functional characterization of the Arabidopsis bHLH92 transcription factor in abiotic stress.
Jiang Y, Yang B, Deyholos MK., Mol Genet Genomics 282(5), 2009
PMID: 19760256
Jiang Y, Yang B, Deyholos MK., Mol Genet Genomics 282(5), 2009
PMID: 19760256
Genome-wide identification and evolutionary analysis of the animal specific ETS transcription factor family.
Wang Z, Zhang Q., Evol Bioinform Online 5(), 2009
PMID: 20011068
Wang Z, Zhang Q., Evol Bioinform Online 5(), 2009
PMID: 20011068
Identification of regulatory elements involved in expression and induction by sucrose and UV-B light of the Arabidopsis thaliana COX5b-2 gene, encoding an isoform of cytochrome c oxidase subunit 5b
Comelli RN, Gonzalez DH., Physiol Plant 137(3), 2009
PMID: IND44274086
Comelli RN, Gonzalez DH., Physiol Plant 137(3), 2009
PMID: IND44274086
The Arabidopsis B-box zinc finger family.
Khanna R, Kronmiller B, Maszle DR, Coupland G, Holm M, Mizuno T, Wu SH., Plant Cell 21(11), 2009
PMID: 19920209
Khanna R, Kronmiller B, Maszle DR, Coupland G, Holm M, Mizuno T, Wu SH., Plant Cell 21(11), 2009
PMID: 19920209
Jasmonate controls late development stages of petal growth in Arabidopsis thaliana.
Brioudes F, Joly C, Szécsi J, Varaud E, Leroux J, Bellvert F, Bertrand C, Bendahmane M., Plant J 60(6), 2009
PMID: 19765234
Brioudes F, Joly C, Szécsi J, Varaud E, Leroux J, Bellvert F, Bertrand C, Bendahmane M., Plant J 60(6), 2009
PMID: 19765234
Molecular and biochemical characterization of benzalacetone synthase and chalcone synthase genes and their proteins from raspberry (Rubus idaeus L.).
Zheng D, Hrazdina G., Arch Biochem Biophys 470(2), 2008
PMID: 18068110
Zheng D, Hrazdina G., Arch Biochem Biophys 470(2), 2008
PMID: 18068110
The interaction domains of the plant Myc-like bHLH transcription factors can regulate the transactivation strength.
Pattanaik S, Xie CH, Yuan L., Planta 227(3), 2008
PMID: 18075757
Pattanaik S, Xie CH, Yuan L., Planta 227(3), 2008
PMID: 18075757
The Arabidopsis phytochrome-interacting factor PIF7, together with PIF3 and PIF4, regulates responses to prolonged red light by modulating phyB levels.
Leivar P, Monte E, Al-Sady B, Carle C, Storer A, Alonso JM, Ecker JR, Quail PH., Plant Cell 20(2), 2008
PMID: 18252845
Leivar P, Monte E, Al-Sady B, Carle C, Storer A, Alonso JM, Ecker JR, Quail PH., Plant Cell 20(2), 2008
PMID: 18252845
MYB transcription factors that colour our fruit.
Allan AC, Hellens RP, Laing WA., Trends Plant Sci 13(3), 2008
PMID: 18280199
Allan AC, Hellens RP, Laing WA., Trends Plant Sci 13(3), 2008
PMID: 18280199
FIT interacts with AtbHLH38 and AtbHLH39 in regulating iron uptake gene expression for iron homeostasis in Arabidopsis.
Yuan Y, Wu H, Wang N, Li J, Zhao W, Du J, Wang D, Ling HQ., Cell Res 18(3), 2008
PMID: 18268542
Yuan Y, Wu H, Wang N, Li J, Zhao W, Du J, Wang D, Ling HQ., Cell Res 18(3), 2008
PMID: 18268542
Tobacco transcription factors: novel insights into transcriptional regulation in the Solanaceae.
Rushton PJ, Bokowiec MT, Han S, Zhang H, Brannock JF, Chen X, Laudeman TW, Timko MP., Plant Physiol 147(1), 2008
PMID: 18337489
Rushton PJ, Bokowiec MT, Han S, Zhang H, Brannock JF, Chen X, Laudeman TW, Timko MP., Plant Physiol 147(1), 2008
PMID: 18337489
Antagonistic jacalin-related lectins regulate the size of ER body-type beta-glucosidase complexes in Arabidopsis thaliana.
Nagano AJ, Fukao Y, Fujiwara M, Nishimura M, Hara-Nishimura I., Plant Cell Physiol 49(6), 2008
PMID: 18467340
Nagano AJ, Fukao Y, Fujiwara M, Nishimura M, Hara-Nishimura I., Plant Cell Physiol 49(6), 2008
PMID: 18467340
The Q-type C2H2 zinc finger subfamily of transcription factors in Triticum aestivum is predominantly expressed in roots and enriched with members containing an EAR repressor motif and responsive to drought stress.
Kam J, Gresshoff PM, Shorter R, Xue GP., Plant Mol Biol 67(3), 2008
PMID: 18347915
Kam J, Gresshoff PM, Shorter R, Xue GP., Plant Mol Biol 67(3), 2008
PMID: 18347915
MYBL2 is a new regulator of flavonoid biosynthesis in Arabidopsis thaliana.
Dubos C, Le Gourrierec J, Baudry A, Huep G, Lanet E, Debeaujon I, Routaboul JM, Alboresi A, Weisshaar B, Lepiniec L., Plant J 55(6), 2008
PMID: 18532978
Dubos C, Le Gourrierec J, Baudry A, Huep G, Lanet E, Debeaujon I, Routaboul JM, Alboresi A, Weisshaar B, Lepiniec L., Plant J 55(6), 2008
PMID: 18532978
Phylogenetic and expression analysis of the basic helix-loop-helix transcription factor gene family: genomic approach to cellular differentiation.
Stevens JD, Roalson EH, Skinner MK., Differentiation 76(9), 2008
PMID: 18557763
Stevens JD, Roalson EH, Skinner MK., Differentiation 76(9), 2008
PMID: 18557763
RETARDED GROWTH OF EMBRYO1, a new basic helix-loop-helix protein, expresses in endosperm to control embryo growth.
Kondou Y, Nakazawa M, Kawashima M, Ichikawa T, Yoshizumi T, Suzuki K, Ishikawa A, Koshi T, Matsui R, Muto S, Matsui M., Plant Physiol 147(4), 2008
PMID: 18567831
Kondou Y, Nakazawa M, Kawashima M, Ichikawa T, Yoshizumi T, Suzuki K, Ishikawa A, Koshi T, Matsui R, Muto S, Matsui M., Plant Physiol 147(4), 2008
PMID: 18567831
Functional domains of SPATULA, a bHLH transcription factor involved in carpel and fruit development in Arabidopsis.
Groszmann M, Paicu T, Smyth DR., Plant J 55(1), 2008
PMID: 18315540
Groszmann M, Paicu T, Smyth DR., Plant J 55(1), 2008
PMID: 18315540
PAR1 and PAR2 integrate shade and hormone transcriptional networks.
Bou-Torrent J, Roig-Villanova I, Galstyan A, Martínez-García JF., Plant Signal Behav 3(7), 2008
PMID: 19704482
Bou-Torrent J, Roig-Villanova I, Galstyan A, Martínez-García JF., Plant Signal Behav 3(7), 2008
PMID: 19704482
Structure and functional analysis of wheat ICE (inducer of CBF expression) genes.
Badawi M, Reddy YV, Agharbaoui Z, Tominaga Y, Danyluk J, Sarhan F, Houde M., Plant Cell Physiol 49(8), 2008
PMID: 18635580
Badawi M, Reddy YV, Agharbaoui Z, Tominaga Y, Danyluk J, Sarhan F, Houde M., Plant Cell Physiol 49(8), 2008
PMID: 18635580
Gene expression analysis in citrus reveals the role of gibberellins on photosynthesis and stress.
Huerta L, Forment J, Gadea J, Fagoaga C, Peña L, Pérez-Amador MA, García-Martínez JL., Plant Cell Environ 31(11), 2008
PMID: 18684239
Huerta L, Forment J, Gadea J, Fagoaga C, Peña L, Pérez-Amador MA, García-Martínez JL., Plant Cell Environ 31(11), 2008
PMID: 18684239
Transcriptional analysis of the sweet orange interaction with the citrus canker pathogens Xanthomonas axonopodis pv. citri and Xanthomonas axonopodis pv. aurantifolii
CERNADAS RAÚLANDRÉS, CAMILLO LUCIANARODRIGUES, BENEDETTI CELSOEDUARDO., Mol Plant Pathol 9(5), 2008
PMID: IND44089690
CERNADAS RAÚLANDRÉS, CAMILLO LUCIANARODRIGUES, BENEDETTI CELSOEDUARDO., Mol Plant Pathol 9(5), 2008
PMID: IND44089690
IT3F: a web-based tool for functional analysis of transcription factors in plants.
Bailey PC, Dicks J, Wang TL, Martin C., Phytochemistry 69(13), 2008
PMID: 18771782
Bailey PC, Dicks J, Wang TL, Martin C., Phytochemistry 69(13), 2008
PMID: 18771782
Functional specialization of the TRANSPARENT TESTA GLABRA1 network allows differential hormonal control of laminal and marginal trichome initiation in Arabidopsis rosette leaves.
Maes L, Inzé D, Goossens A., Plant Physiol 148(3), 2008
PMID: 18784284
Maes L, Inzé D, Goossens A., Plant Physiol 148(3), 2008
PMID: 18784284
Elicitor-induced transcription factors for metabolic reprogramming of secondary metabolism in Medicago truncatula.
Naoumkina MA, He X, Dixon RA., BMC Plant Biol 8(), 2008
PMID: 19102779
Naoumkina MA, He X, Dixon RA., BMC Plant Biol 8(), 2008
PMID: 19102779
Red colouration in apple fruit is due to the activity of the MYB transcription factor, MdMYB10.
Espley RV, Hellens RP, Putterill J, Stevenson DE, Kutty-Amma S, Allan AC., Plant J 49(3), 2007
PMID: 17181777
Espley RV, Hellens RP, Putterill J, Stevenson DE, Kutty-Amma S, Allan AC., Plant J 49(3), 2007
PMID: 17181777
Termination of asymmetric cell division and differentiation of stomata.
Pillitteri LJ, Sloan DB, Bogenschutz NL, Torii KU., Nature 445(7127), 2007
PMID: 17183267
Pillitteri LJ, Sloan DB, Bogenschutz NL, Torii KU., Nature 445(7127), 2007
PMID: 17183267
Iron assimilation and transcription factor controlled synthesis of riboflavin in plants.
Vorwieger A, Gryczka C, Czihal A, Douchkov D, Tiedemann J, Mock HP, Jakoby M, Weisshaar B, Saalbach I, Bäumlein H., Planta 226(1), 2007
PMID: 17260143
Vorwieger A, Gryczka C, Czihal A, Douchkov D, Tiedemann J, Mock HP, Jakoby M, Weisshaar B, Saalbach I, Bäumlein H., Planta 226(1), 2007
PMID: 17260143
Origin and diversification of the basic helix-loop-helix gene family in metazoans: insights from comparative genomics.
Simionato E, Ledent V, Richards G, Thomas-Chollier M, Kerner P, Coornaert D, Degnan BM, Vervoort M., BMC Evol Biol 7(), 2007
PMID: 17335570
Simionato E, Ledent V, Richards G, Thomas-Chollier M, Kerner P, Coornaert D, Degnan BM, Vervoort M., BMC Evol Biol 7(), 2007
PMID: 17335570
Multiple basic helix-loop-helix proteins regulate expression of the ENO1 gene of Saccharomyces cerevisiae.
Chen M, Lopes JM., Eukaryot Cell 6(5), 2007
PMID: 17351075
Chen M, Lopes JM., Eukaryot Cell 6(5), 2007
PMID: 17351075
FIT, the FER-LIKE IRON DEFICIENCY INDUCED TRANSCRIPTION FACTOR in Arabidopsis.
Bauer P, Ling HQ, Guerinot ML., Plant Physiol Biochem 45(5), 2007
PMID: 17466530
Bauer P, Ling HQ, Guerinot ML., Plant Physiol Biochem 45(5), 2007
PMID: 17466530
Functional diversification of a basic helix-loop-helix protein due to alternative transcription during generation of amphidiploidy in tobacco plants.
Kodama Y, Sano H., Biochem J 403(3), 2007
PMID: 17288537
Kodama Y, Sano H., Biochem J 403(3), 2007
PMID: 17288537
Iron deficiency-mediated stress regulation of four subgroup Ib BHLH genes in Arabidopsis thaliana.
Wang HY, Klatte M, Jakoby M, Bäumlein H, Weisshaar B, Bauer P., Planta 226(4), 2007
PMID: 17516080
Wang HY, Klatte M, Jakoby M, Bäumlein H, Weisshaar B, Bauer P., Planta 226(4), 2007
PMID: 17516080
An ancient mechanism controls the development of cells with a rooting function in land plants.
Menand B, Yi K, Jouannic S, Hoffmann L, Ryan E, Linstead P, Schaefer DG, Dolan L., Science 316(5830), 2007
PMID: 17556585
Menand B, Yi K, Jouannic S, Hoffmann L, Ryan E, Linstead P, Schaefer DG, Dolan L., Science 316(5830), 2007
PMID: 17556585
Maize Lc transcription factor enhances biosynthesis of anthocyanins, distinct proanthocyanidins and phenylpropanoids in apple (Malus domestica Borkh.).
Li H, Flachowsky H, Fischer TC, Hanke MV, Forkmann G, Treutter D, Schwab W, Hoffmann T, Szankowski I., Planta 226(5), 2007
PMID: 17618453
Li H, Flachowsky H, Fischer TC, Hanke MV, Forkmann G, Treutter D, Schwab W, Hoffmann T, Szankowski I., Planta 226(5), 2007
PMID: 17618453
Overexpression of TaVRN1 in Arabidopsis promotes early flowering and alters development.
Adam H, Ouellet F, Kane NA, Agharbaoui Z, Major G, Tominaga Y, Sarhan F., Plant Cell Physiol 48(8), 2007
PMID: 17623742
Adam H, Ouellet F, Kane NA, Agharbaoui Z, Major G, Tominaga Y, Sarhan F., Plant Cell Physiol 48(8), 2007
PMID: 17623742
Regulation of the Arabidopsis root vascular initial population by LONESOME HIGHWAY.
Ohashi-Ito K, Bergmann DC., Development 134(16), 2007
PMID: 17626058
Ohashi-Ito K, Bergmann DC., Development 134(16), 2007
PMID: 17626058
Differential gene expression in Arabidopsis wild-type and mutant anthers: insights into anther cell differentiation and regulatory networks.
Wijeratne AJ, Zhang W, Sun Y, Liu W, Albert R, Zheng Z, Oppenheimer DG, Zhao D, Ma H., Plant J 52(1), 2007
PMID: 17666023
Wijeratne AJ, Zhang W, Sun Y, Liu W, Albert R, Zheng Z, Oppenheimer DG, Zhao D, Ma H., Plant J 52(1), 2007
PMID: 17666023
Relaxed constraint and evolutionary rate variation between basic helix-loop-helix floral anthocyanin regulators in Ipomoea.
Streisfeld MA, Rausher MD., Mol Biol Evol 24(12), 2007
PMID: 17921484
Streisfeld MA, Rausher MD., Mol Biol Evol 24(12), 2007
PMID: 17921484
The basic helix loop helix domain of maize R links transcriptional regulation and histone modifications by recruitment of an EMSY-related factor.
Hernandez JM, Feller A, Morohashi K, Frame K, Grotewold E., Proc Natl Acad Sci U S A 104(43), 2007
PMID: 17940002
Hernandez JM, Feller A, Morohashi K, Frame K, Grotewold E., Proc Natl Acad Sci U S A 104(43), 2007
PMID: 17940002
Interaction of shade avoidance and auxin responses: a role for two novel atypical bHLH proteins.
Roig-Villanova I, Bou-Torrent J, Galstyan A, Carretero-Paulet L, Portolés S, Rodríguez-Concepción M, Martínez-García JF., EMBO J 26(22), 2007
PMID: 17948056
Roig-Villanova I, Bou-Torrent J, Galstyan A, Carretero-Paulet L, Portolés S, Rodríguez-Concepción M, Martínez-García JF., EMBO J 26(22), 2007
PMID: 17948056
Genetics and biochemistry of seed flavonoids.
Lepiniec L, Debeaujon I, Routaboul JM, Baudry A, Pourcel L, Nesi N, Caboche M., Annu Rev Plant Biol 57(), 2006
PMID: 16669768
Lepiniec L, Debeaujon I, Routaboul JM, Baudry A, Pourcel L, Nesi N, Caboche M., Annu Rev Plant Biol 57(), 2006
PMID: 16669768
Caught red-handed: Rc encodes a basic helix-loop-helix protein conditioning red pericarp in rice.
Sweeney MT, Thomson MJ, Pfeil BE, McCouch S., Plant Cell 18(2), 2006
PMID: 16399804
Sweeney MT, Thomson MJ, Pfeil BE, McCouch S., Plant Cell 18(2), 2006
PMID: 16399804
Genome-wide analysis of the ERF gene family in Arabidopsis and rice.
Nakano T, Suzuki K, Fujimura T, Shinshi H., Plant Physiol 140(2), 2006
PMID: 16407444
Nakano T, Suzuki K, Fujimura T, Shinshi H., Plant Physiol 140(2), 2006
PMID: 16407444
Isolation of cDNAs for R2R3-MYB, bHLH and WDR transcriptional regulators and identification of c and ca mutations conferring white flowers in the Japanese morning glory.
Morita Y, Saitoh M, Hoshino A, Nitasaka E, Iida S., Plant Cell Physiol 47(4), 2006
PMID: 16446312
Morita Y, Saitoh M, Hoshino A, Nitasaka E, Iida S., Plant Cell Physiol 47(4), 2006
PMID: 16446312
TT8 controls its own expression in a feedback regulation involving TTG1 and homologous MYB and bHLH factors, allowing a strong and cell-specific accumulation of flavonoids in Arabidopsis thaliana.
Baudry A, Caboche M, Lepiniec L., Plant J 46(5), 2006
PMID: 16709193
Baudry A, Caboche M, Lepiniec L., Plant J 46(5), 2006
PMID: 16709193
Transcription factor families in Arabidopsis: major progress and outstanding issues for future research.
Qu LJ, Zhu YX., Curr Opin Plant Biol 9(5), 2006
PMID: 16877030
Qu LJ, Zhu YX., Curr Opin Plant Biol 9(5), 2006
PMID: 16877030
Genome-wide analysis of basic/helix-loop-helix transcription factor family in rice and Arabidopsis.
Li X, Duan X, Jiang H, Sun Y, Tang Y, Yuan Z, Guo J, Liang W, Chen L, Yin J, Ma H, Wang J, Zhang D., Plant Physiol 141(4), 2006
PMID: 16896230
Li X, Duan X, Jiang H, Sun Y, Tang Y, Yuan Z, Guo J, Liang W, Chen L, Yin J, Ma H, Wang J, Zhang D., Plant Physiol 141(4), 2006
PMID: 16896230
BIGPETALp, a bHLH transcription factor is involved in the control of Arabidopsis petal size.
Szécsi J, Joly C, Bordji K, Varaud E, Cock JM, Dumas C, Bendahmane M., EMBO J 25(16), 2006
PMID: 16902407
Szécsi J, Joly C, Bordji K, Varaud E, Cock JM, Dumas C, Bendahmane M., EMBO J 25(16), 2006
PMID: 16902407
Gibberellin mobilizes distinct DELLA-dependent transcriptomes to regulate seed germination and floral development in Arabidopsis.
Cao D, Cheng H, Wu W, Soo HM, Peng J., Plant Physiol 142(2), 2006
PMID: 16920880
Cao D, Cheng H, Wu W, Soo HM, Peng J., Plant Physiol 142(2), 2006
PMID: 16920880
Functional analysis of a calcium-binding transcription factor involved in plant salt stress signaling.
Kim J, Kim HY., FEBS Lett 580(22), 2006
PMID: 16962584
Kim J, Kim HY., FEBS Lett 580(22), 2006
PMID: 16962584
Arabidopsis FAMA controls the final proliferation/differentiation switch during stomatal development.
Ohashi-Ito K, Bergmann DC., Plant Cell 18(10), 2006
PMID: 17088607
Ohashi-Ito K, Bergmann DC., Plant Cell 18(10), 2006
PMID: 17088607
An Arabidopsis basic helix-loop-helix leucine zipper protein modulates metal homeostasis and auxin conjugate responsiveness.
Rampey RA, Woodward AW, Hobbs BN, Tierney MP, Lahner B, Salt DE, Bartel B., Genetics 174(4), 2006
PMID: 17028341
Rampey RA, Woodward AW, Hobbs BN, Tierney MP, Lahner B, Salt DE, Bartel B., Genetics 174(4), 2006
PMID: 17028341
Differential combinatorial interactions of cis-acting elements recognized by R2R3-MYB, BZIP, and BHLH factors control light-responsive and tissue-specific activation of phenylpropanoid biosynthesis genes.
Hartmann U, Sagasser M, Mehrtens F, Stracke R, Weisshaar B., Plant Mol Biol 57(2), 2005
PMID: 15821875
Hartmann U, Sagasser M, Mehrtens F, Stracke R, Weisshaar B., Plant Mol Biol 57(2), 2005
PMID: 15821875
bHLH class transcription factors take centre stage in phytochrome signalling.
Duek PD, Fankhauser C., Trends Plant Sci 10(2), 2005
PMID: 15708340
Duek PD, Fankhauser C., Trends Plant Sci 10(2), 2005
PMID: 15708340
MYB-bHLH-WD40 protein complex and the evolution of cellular diversity.
Ramsay NA, Glover BJ., Trends Plant Sci 10(2), 2005
PMID: 15708343
Ramsay NA, Glover BJ., Trends Plant Sci 10(2), 2005
PMID: 15708343
The Arabidopsis R2R3 MYB proteins FOUR LIPS and MYB88 restrict divisions late in the stomatal cell lineage.
Lai LB, Nadeau JA, Lucas J, Lee EK, Nakagawa T, Zhao L, Geisler M, Sack FD., Plant Cell 17(10), 2005
PMID: 16155180
Lai LB, Nadeau JA, Lucas J, Lee EK, Nakagawa T, Zhao L, Geisler M, Sack FD., Plant Cell 17(10), 2005
PMID: 16155180
Elucidation of subfamily segregation and intramolecular coevolution of the olfactomedin-like proteins by comprehensive phylogenetic analysis and gene expression pattern assessment.
Zeng LC, Han ZG, Ma WJ., FEBS Lett 579(25), 2005
PMID: 16212957
Zeng LC, Han ZG, Ma WJ., FEBS Lett 579(25), 2005
PMID: 16212957
The Arabidopsis cold-responsive transcriptome and its regulation by ICE1.
Lee BH, Henderson DA, Zhu JK., Plant Cell 17(11), 2005
PMID: 16214899
Lee BH, Henderson DA, Zhu JK., Plant Cell 17(11), 2005
PMID: 16214899
Isolation, characterization, and pericycle-specific transcriptome analyses of the novel maize lateral and seminal root initiation mutant rum1.
Woll K, Borsuk LA, Stransky H, Nettleton D, Schnable PS, Hochholdinger F., Plant Physiol 139(3), 2005
PMID: 16215225
Woll K, Borsuk LA, Stransky H, Nettleton D, Schnable PS, Hochholdinger F., Plant Physiol 139(3), 2005
PMID: 16215225
Computational detection of microRNAs targeting transcription factor genes in Arabidopsis thaliana.
Li X, Zhang YZ., Comput Biol Chem 29(5), 2005
PMID: 16221572
Li X, Zhang YZ., Comput Biol Chem 29(5), 2005
PMID: 16221572
An annotation update via cDNA sequence analysis and comprehensive profiling of developmental, hormonal or environmental responsiveness of the Arabidopsis AP2/EREBP transcription factor gene family.
Feng JX, Liu D, Pan Y, Gong W, Ma LG, Luo JC, Deng XW, Zhu YX., Plant Mol Biol 59(6), 2005
PMID: 16307362
Feng JX, Liu D, Pan Y, Gong W, Ma LG, Luo JC, Deng XW, Zhu YX., Plant Mol Biol 59(6), 2005
PMID: 16307362
Light signal transduction in higher plants.
Chen M, Chory J, Fankhauser C., Annu Rev Genet 38(), 2004
PMID: 15568973
Chen M, Chory J, Fankhauser C., Annu Rev Genet 38(), 2004
PMID: 15568973
Genome-wide identification of Arabidopsis coiled-coil proteins and establishment of the ARABI-COIL database.
Rose A, Manikantan S, Schraegle SJ, Maloy MA, Stahlberg EA, Meier I., Plant Physiol 134(3), 2004
PMID: 15020757
Rose A, Manikantan S, Schraegle SJ, Maloy MA, Stahlberg EA, Meier I., Plant Physiol 134(3), 2004
PMID: 15020757
Genomics applications to biotech traits: a revolution in progress?
Gutterson N, Zhang JZ., Curr Opin Plant Biol 7(2), 2004
PMID: 15003225
Gutterson N, Zhang JZ., Curr Opin Plant Biol 7(2), 2004
PMID: 15003225
NAI1 gene encodes a basic-helix-loop-helix-type putative transcription factor that regulates the formation of an endoplasmic reticulum-derived structure, the ER body.
Matsushima R, Fukao Y, Nishimura M, Hara-Nishimura I., Plant Cell 16(6), 2004
PMID: 15155889
Matsushima R, Fukao Y, Nishimura M, Hara-Nishimura I., Plant Cell 16(6), 2004
PMID: 15155889
Expression profiling of phyB mutant demonstrates substantial contribution of other phytochromes to red-light-regulated gene expression during seedling de-etiolation.
Tepperman JM, Hudson ME, Khanna R, Zhu T, Chang SH, Wang X, Quail PH., Plant J 38(5), 2004
PMID: 15144375
Tepperman JM, Hudson ME, Khanna R, Zhu T, Chang SH, Wang X, Quail PH., Plant J 38(5), 2004
PMID: 15144375
Genome-wide ORFeome cloning and analysis of Arabidopsis transcription factor genes.
Gong W, Shen YP, Ma LG, Pan Y, Du YL, Wang DH, Yang JY, Hu LD, Liu XF, Dong CX, Ma L, Chen YH, Yang XY, Gao Y, Zhu D, Tan X, Mu JY, Zhang DB, Liu YL, Dinesh-Kumar SP, Li Y, Wang XP, Gu HY, Qu LJ, Bai SN, Lu YT, Li JY, Zhao JD, Zuo J, Huang H, Deng XW, Zhu YX., Plant Physiol 135(2), 2004
PMID: 15208423
Gong W, Shen YP, Ma LG, Pan Y, Du YL, Wang DH, Yang JY, Hu LD, Liu XF, Dong CX, Ma L, Chen YH, Yang XY, Gao Y, Zhu D, Tan X, Mu JY, Zhang DB, Liu YL, Dinesh-Kumar SP, Li Y, Wang XP, Gu HY, Qu LJ, Bai SN, Lu YT, Li JY, Zhao JD, Zuo J, Huang H, Deng XW, Zhu YX., Plant Physiol 135(2), 2004
PMID: 15208423
Methyl jasmonate induced expression of the tobacco putrescine N -methyltransferase genes requires both G-box and GCC-motif elements.
Xu B, Timko M., Plant Mol Biol 55(5), 2004
PMID: 15604714
Xu B, Timko M., Plant Mol Biol 55(5), 2004
PMID: 15604714
TT2, TT8, and TTG1 synergistically specify the expression of BANYULS and proanthocyanidin biosynthesis in Arabidopsis thaliana.
Baudry A, Heim MA, Dubreucq B, Caboche M, Weisshaar B, Lepiniec L., Plant J 39(3), 2004
PMID: 15255866
Baudry A, Heim MA, Dubreucq B, Caboche M, Weisshaar B, Lepiniec L., Plant J 39(3), 2004
PMID: 15255866
Circadian-controlled basic/helix-loop-helix factor, PIL6, implicated in light-signal transduction in Arabidopsis thaliana.
Fujimori T, Yamashino T, Kato T, Mizuno T., Plant Cell Physiol 45(8), 2004
PMID: 15356333
Fujimori T, Yamashino T, Kato T, Mizuno T., Plant Cell Physiol 45(8), 2004
PMID: 15356333
Different mechanisms participate in the R-dependent activity of the R2R3 MYB transcription factor C1.
Hernandez JM, Heine GF, Irani NG, Feller A, Kim MG, Matulnik T, Chandler VL, Grotewold E., J Biol Chem 279(46), 2004
PMID: 15347654
Hernandez JM, Heine GF, Irani NG, Feller A, Kim MG, Matulnik T, Chandler VL, Grotewold E., J Biol Chem 279(46), 2004
PMID: 15347654
Comprehensive identification of Arabidopsis thaliana MYB transcription factors interacting with R/B-like BHLH proteins.
Zimmermann IM, Heim MA, Weisshaar B, Uhrig JF., Plant J 40(1), 2004
PMID: 15361138
Zimmermann IM, Heim MA, Weisshaar B, Uhrig JF., Plant J 40(1), 2004
PMID: 15361138
A novel molecular recognition motif necessary for targeting photoactivated phytochrome signaling to specific basic helix-loop-helix transcription factors.
Khanna R, Huq E, Kikis EA, Al-Sady B, Lanzatella C, Quail PH., Plant Cell 16(11), 2004
PMID: 15486100
Khanna R, Huq E, Kikis EA, Al-Sady B, Lanzatella C, Quail PH., Plant Cell 16(11), 2004
PMID: 15486100
FRU (BHLH029) is required for induction of iron mobilization genes in Arabidopsis thaliana.
Jakoby M, Wang HY, Reidt W, Weisshaar B, Bauer P., FEBS Lett 577(3), 2004
PMID: 15556641
Jakoby M, Wang HY, Reidt W, Weisshaar B, Bauer P., FEBS Lett 577(3), 2004
PMID: 15556641
Analysis of sequence, map position, and gene expression reveals conserved essential genes for iron uptake in Arabidopsis and tomato.
Bauer P, Thiel T, Klatte M, Bereczky Z, Brumbarova T, Hell R, Grosse I., Plant Physiol 136(4), 2004
PMID: 15531708
Bauer P, Thiel T, Klatte M, Bereczky Z, Brumbarova T, Hell R, Grosse I., Plant Physiol 136(4), 2004
PMID: 15531708
The essential basic helix-loop-helix protein FIT1 is required for the iron deficiency response.
Colangelo EP, Guerinot ML., Plant Cell 16(12), 2004
PMID: 15539473
Colangelo EP, Guerinot ML., Plant Cell 16(12), 2004
PMID: 15539473
RERJ1, a jasmonic acid-responsive gene from rice, encodes a basic helix-loop-helix protein.
Kiribuchi K, Sugimori M, Takeda M, Otani T, Okada K, Onodera H, Ugaki M, Tanaka Y, Tomiyama-Akimoto C, Yamaguchi T, Minami E, Shibuya N, Omori T, Nishiyama M, Nojiri H, Yamane H., Biochem Biophys Res Commun 325(3), 2004
PMID: 15541369
Kiribuchi K, Sugimori M, Takeda M, Otani T, Okada K, Onodera H, Ugaki M, Tanaka Y, Tomiyama-Akimoto C, Yamaguchi T, Minami E, Shibuya N, Omori T, Nishiyama M, Nojiri H, Yamane H., Biochem Biophys Res Commun 325(3), 2004
PMID: 15541369
The degradation of HFR1, a putative bHLH class transcription factor involved in light signaling, is regulated by phosphorylation and requires COP1.
Duek PD, Elmer MV, van Oosten VR, Fankhauser C., Curr Biol 14(24), 2004
PMID: 15620659
Duek PD, Elmer MV, van Oosten VR, Fankhauser C., Curr Biol 14(24), 2004
PMID: 15620659
The Arabidopsis basic/helix-loop-helix transcription factor family.
Toledo-Ortiz G, Huq E, Quail PH., Plant Cell 15(8), 2003
PMID: 12897250
Toledo-Ortiz G, Huq E, Quail PH., Plant Cell 15(8), 2003
PMID: 12897250
LAX and SPA: major regulators of shoot branching in rice.
Komatsu K, Maekawa M, Ujiie S, Satake Y, Furutani I, Okamoto H, Shimamoto K, Kyozuka J., Proc Natl Acad Sci U S A 100(20), 2003
PMID: 13130077
Komatsu K, Maekawa M, Ujiie S, Satake Y, Furutani I, Okamoto H, Shimamoto K, Kyozuka J., Proc Natl Acad Sci U S A 100(20), 2003
PMID: 13130077
Update on the basic helix-loop-helix transcription factor gene family in Arabidopsis thaliana.
Bailey PC, Martin C, Toledo-Ortiz G, Quail PH, Huq E, Heim MA, Jakoby M, Werber M, Weisshaar B., Plant Cell 15(11), 2003
PMID: 14600211
Bailey PC, Martin C, Toledo-Ortiz G, Quail PH, Huq E, Heim MA, Jakoby M, Werber M, Weisshaar B., Plant Cell 15(11), 2003
PMID: 14600211
Overexpression of a mutant basic helix-loop-helix protein HFR1, HFR1-deltaN105, activates a branch pathway of light signaling in Arabidopsis.
Yang KY, Kim YM, Lee S, Song PS, Soh MS., Plant Physiol 133(4), 2003
PMID: 14645731
Yang KY, Kim YM, Lee S, Song PS, Soh MS., Plant Physiol 133(4), 2003
PMID: 14645731
References
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